>AROC_BARHE (Q6G4D4) Chorismate synthase (EC 4.2.3.5)|
           (5-enolpyruvylshikimate-3-phosphate phospholyase)
          Length = 366

 Score = 32.7 bits (73), Expect = 0.60
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = -1

Query: 177 SLSCATNPSSPGITLVSQAVTSYLNRPRATLSSHCARRREL 55
           +L C  +   PGIT     + SYLN+ +   S +  +RREL
Sbjct: 22  ALGCVIDGCPPGITFTLSDIQSYLNKRKPGQSKYTTQRREL 62

>ZSWM5_MOUSE (Q80TC6) Zinc finger SWIM domain-containing protein 5|
          Length = 1188

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 13/21 (61%), Positives = 15/21 (71%)
 Frame = -1

Query: 327 RK*LLSPPPFSKRKRTSSWPT 265
           R+ LLSPPP S  KR  SWP+
Sbjct: 7   REELLSPPPISPAKRLCSWPS 27

>AROC_NITEU (Q82TK9) Chorismate synthase (EC 4.2.3.5)|
           (5-enolpyruvylshikimate-3-phosphate phospholyase)
          Length = 390

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = -1

Query: 180 PSLSCATNPSSPGITLVSQAVTSYLNRPRATLSSHCARRRE 58
           P++ C  +   PG+TL  + +   L+R +   S H  +RRE
Sbjct: 21  PAIGCIVDGCPPGLTLSVEDIQQELDRRKPGTSRHVTQRRE 61

>TRX2_MOUSE (O08550) Trithorax homolog 2 (WW domain-binding protein 7)|
           (Fragment)
          Length = 290

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 24/67 (35%), Positives = 31/67 (46%)
 Frame = +1

Query: 34  APY*VLPQFSPPRTVGGQGSPRPIQI*RNSLRDQGDSWRAWVCCTA*RRPPPQEAPNRVP 213
           AP   +P  SPPR      +P P+   R S+  +  ++R W   T    PPP  AP   P
Sbjct: 207 APQEPVPVSSPPRVPTPPSTPVPLPEKRRSILRE-PTFR-WTSLTR-ELPPPPPAPPPAP 263

Query: 214 C*PCAPA 234
             P APA
Sbjct: 264 SPPPAPA 270

>AROC_BUCBP (Q89AX9) Chorismate synthase (EC 4.2.3.5)|
           (5-enolpyruvylshikimate-3-phosphate phospholyase)
          Length = 355

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 7/61 (11%)
 Frame = -1

Query: 210 NSVGRFLRWR-------PSLSCATNPSSPGITLVSQAVTSYLNRPRATLSSHCARRRELR 52
           NS+G+  R         P L C  + + PG+ +        L+R R   S +  +RREL 
Sbjct: 4   NSIGKLFRVTTFGESHGPKLGCIIDGTPPGLEISENDFQKELDRRRPGTSKYTTQRRELD 63

Query: 51  K 49
           K
Sbjct: 64  K 64

>UL34_VZVD (P09280) Virion gene 24 protein|
          Length = 269

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 12/47 (25%), Positives = 24/47 (51%)
 Frame = -1

Query: 261 VKLNLAESNGWSTRSTRNSVGRFLRWRPSLSCATNPSSPGITLVSQA 121
           +KL    ++ +  + T N++  ++RWRPS        SP  ++  Q+
Sbjct: 178 IKLMARATDAYMYKETGNNLDEYIRWRPSFRSPPENGSPNTSVQMQS 224

>AROC_BRUSU (P63608) Chorismate synthase (EC 4.2.3.5)|
           (5-enolpyruvylshikimate-3-phosphate phospholyase)
          Length = 364

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 7/60 (11%)
 Frame = -1

Query: 216 TRNSVGRFLR---WRPS----LSCATNPSSPGITLVSQAVTSYLNRPRATLSSHCARRRE 58
           + NS G   R   W  S    L C  +   PGIT     + S+L++ +   S +  +RRE
Sbjct: 2   SHNSFGHLFRVTTWGESHGLALGCVVDGCPPGITFTEAEIQSFLDKRKPGQSKYTTQRRE 61

>AROC_BRUME (P63607) Chorismate synthase (EC 4.2.3.5)|
           (5-enolpyruvylshikimate-3-phosphate phospholyase)
          Length = 364

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 7/60 (11%)
 Frame = -1

Query: 216 TRNSVGRFLR---WRPS----LSCATNPSSPGITLVSQAVTSYLNRPRATLSSHCARRRE 58
           + NS G   R   W  S    L C  +   PGIT     + S+L++ +   S +  +RRE
Sbjct: 2   SHNSFGHLFRVTTWGESHGLALGCVVDGCPPGITFTEAEIQSFLDKRKPGQSKYTTQRRE 61

>NFT1_CAEEL (O76463) Nitrilase and fragile histidine triad fusion protein|
           NitFhit [Includes: Bis(5'-adenosyl)-triphosphatase (EC
           3.6.1.29) (Diadenosine 5',5'''-P1,P3-triphosphate
           hydrolase) (Dinucleosidetriphosphatase) (AP3A hydrolase)
           (AP3Aase); Nitrilas
          Length = 440

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
 Frame = +2

Query: 296 ENGGGDSSYFLENAPSIEGDRAPSVVAINVSPIEYGHVLLIP-RVLDRLPQQIDPES 463
           E GG   + F   A  I      S V +N+ P+  GHVL+ P RV+ RL    D E+
Sbjct: 295 ETGGLKFARFNIPADHIFYSTPHSFVFVNLKPVTDGHVLVSPKRVVPRLTDLTDAET 351

>CP8B1_RABIT (O02766) Cytochrome P450 8B1 (EC 1.14.13.95) (CYPVIIIB1)|
           (7-alpha-hydroxycholest-4-en-3-one 12-alpha-hydroxylase)
           (Sterol 12-alpha-hydroxylase)
           (7-alpha-hydroxy-4-cholesten-3-one 12-alpha-hydroxylase)
          Length = 499

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 16/39 (41%), Positives = 20/39 (51%)
 Frame = +2

Query: 200 PTEFRVDRVLQPFDSAKFNFTKVGQEEVLFRFENGGGDS 316
           PT F+ DR L P  S K +F K GQ+   +    G G S
Sbjct: 398 PTTFKYDRFLNPNGSRKVDFYKAGQKIHHYTMPWGSGVS 436

>AROC_AZOSE (Q5P1K1) Chorismate synthase (EC 4.2.3.5)|
           (5-enolpyruvylshikimate-3-phosphate phospholyase)
          Length = 377

 Score = 29.3 bits (64), Expect = 6.6
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = -1

Query: 180 PSLSCATNPSSPGITLVSQAVTSYLNRPRATLSSHCARRRE 58
           P++ C  +   PG+ + +Q +   L+R +   S H  +RRE
Sbjct: 21  PAIGCVVDGCPPGMPISTQEIQVELDRRKPGTSRHVTQRRE 61

>SYNPO_RAT (Q9Z327) Synaptopodin|
          Length = 931

 Score = 28.9 bits (63), Expect = 8.6
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -1

Query: 180 PSLSCATNPSSPGITLVSQAVTSYLNRPRATLSSH 76
           P+     NPSSP  TL + A  S+ N+P A ++ +
Sbjct: 305 PAADINQNPSSPNATLTTAASNSHHNQPTADVNQN 339

>EF1A_HALMA (P16018) Elongation factor 1-alpha (EF-1-alpha) (Elongation factor|
           Tu) (EF-Tu)
          Length = 420

 Score = 28.9 bits (63), Expect = 8.6
 Identities = 19/86 (22%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
 Frame = +2

Query: 230 QPFDSAKFNFTKVGQEEVLFRFENGGGDSSYFLENAPSIEGD--------RAPSVVAINV 385
           +P D+  FN   VG++++        GD     ++ PS+           + PSV+    
Sbjct: 280 EPGDNVGFNVRGVGKDDIR------RGDVCGPADDPPSVAETFQAQIVVMQHPSVITEGY 333

Query: 386 SPIEYGHVLLIPRVLDRLPQQIDPES 463
           +P+ + H   +   ++ + ++IDP S
Sbjct: 334 TPVFHAHTAQVACTVESIDKKIDPSS 359


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,591,179
Number of Sequences: 219361
Number of extensions: 1547136
Number of successful extensions: 4095
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3919
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4077
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3812186532
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)