ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal16i16 |
|---|---|
| Clone Library Name | barley_pub |
>KRA58_HUMAN (O75690) Keratin-associated protein 5-8 (Keratin-associated protein| 5.8) (Ultrahigh sulfur keratin-associated protein 5.8) (Keratin, ultra high-sulfur matrix protein B) (UHS keratin B) (UHS KerB) Length = 187 Score = 35.4 bits (80), Expect = 0.092 Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 2/34 (5%) Frame = -3 Query: 212 CRGCCAW*APSRRCCCGESCTAALLPASCC--CC 117 C+ CC+ + + CCC C ++ +SCC CC Sbjct: 139 CKPCCSQSSCCKPCCCSSGCGSSCCQSSCCKPCC 172 Score = 31.6 bits (70), Expect = 1.3 Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 2/34 (5%) Frame = -3 Query: 212 CRGCCAW*APSRRCCCGESCTAALLPASCC--CC 117 C+ CC+ + + C C C ++ +SCC CC Sbjct: 110 CKPCCSQSSCCKPCSCSSGCGSSCCQSSCCKPCC 143 Score = 29.6 bits (65), Expect = 5.0 Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 3/35 (8%) Frame = -3 Query: 212 CRGC-CAW*APSRRCCCGESCTAALLPASCC--CC 117 C C C+ + + CCC C ++ +SCC CC Sbjct: 80 CGSCGCSQCSCYKPCCCSSGCGSSCCQSSCCKPCC 114
>KRA53_HUMAN (Q6L8H2) Keratin-associated protein 5-3 (Keratin-associated protein| 5.3) (Ultrahigh sulfur keratin-associated protein 5.3) (Keratin-associated protein 5-9) (Keratin-associated protein 5.9) (UHS KerB-like) Length = 238 Score = 35.4 bits (80), Expect = 0.092 Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 2/34 (5%) Frame = -3 Query: 212 CRGCCAW*APSRRCCCGESCTAALLPASCC--CC 117 C+ CC+ + + CCC C ++ +SCC CC Sbjct: 161 CKPCCSQSSCCKPCCCSSGCGSSCCQSSCCKPCC 194 Score = 33.5 bits (75), Expect = 0.35 Identities = 10/30 (33%), Positives = 17/30 (56%) Frame = -3 Query: 212 CRGCCAW*APSRRCCCGESCTAALLPASCC 123 C+ CC+ + + CCC C ++ +SCC Sbjct: 190 CKPCCSQSSCCKPCCCSSGCGSSCCQSSCC 219
>KRA57_HUMAN (Q6L8G8) Keratin-associated protein 5-7 (Keratin-associated protein| 5.7) (Ultrahigh sulfur keratin-associated protein 5.7) (Keratin-associated protein 5-3) (Keratin-associated protein 5.3) Length = 165 Score = 35.0 bits (79), Expect = 0.12 Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 2/34 (5%) Frame = -3 Query: 212 CRGCCAW*APSRRCCCGESCTAALLPASCC--CC 117 C+ CC + + CCC C ++ +SCC CC Sbjct: 117 CKPCCCQSSCCKPCCCSSGCGSSCCQSSCCNPCC 150 Score = 29.6 bits (65), Expect = 5.0 Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 3/35 (8%) Frame = -3 Query: 212 CRGC-CAW*APSRRCCCGESCTAALLPASCC--CC 117 C C C+ + + CCC C ++ +SCC CC Sbjct: 87 CGSCGCSQCSCYKPCCCSSGCGSSCCQSSCCKPCC 121
>PKP1_HUMAN (Q13835) Plakophilin-1 (Band-6 protein) (B6P)| Length = 747 Score = 33.1 bits (74), Expect = 0.46 Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 5/68 (7%) Frame = +1 Query: 316 LSLGIAEQCARQEK----ILKFLMSG-SDVKELDASLLTELTGHPMLSANMGSQPYTPDD 480 +S G+++ +EK I + L SG SDV ASLL+ ++ HP+L MG+Q + Sbjct: 582 MSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPLLHRVMGNQVFPEVT 641 Query: 481 KLXVYEFG 504 +L G Sbjct: 642 RLLTSHTG 649
>GLT5_WHEAT (P10388) Glutenin, high molecular weight subunit DX5 precursor| Length = 839 Score = 32.3 bits (72), Expect = 0.78 Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 4/61 (6%) Frame = +1 Query: 67 PSKELHGVLPFQGKRSQQ----QQQDAGRSAAVQLSPQQHLLEGAYQAQQPLQMMVPGIG 234 P + HG P QG++ QQ QQ G+ SPQ+ + Q QQP Q PG G Sbjct: 621 PGQGQHGQQPGQGQQGQQPGQGQQPGQGQPWYYPTSPQE-----SGQGQQPGQWQQPGQG 675 Query: 235 Q 237 Q Sbjct: 676 Q 676
>PKP1_BOVIN (Q28161) Plakophilin-1 (Band-6 protein) (B6P)| Length = 727 Score = 32.0 bits (71), Expect = 1.0 Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 5/68 (7%) Frame = +1 Query: 316 LSLGIAEQCARQEK----ILKFLMSG-SDVKELDASLLTELTGHPMLSANMGSQPYTPDD 480 +S G+++ +EK I + L SG SDV ASLL+ ++ HP L MG+Q + Sbjct: 562 MSSGMSQLIGLKEKGLPHIARLLQSGNSDVVRSGASLLSNMSRHPALHRVMGTQVFPEVT 621 Query: 481 KLXVYEFG 504 +L G Sbjct: 622 RLLTSHTG 629
>PKP1_MOUSE (P97350) Plakophilin-1| Length = 728 Score = 32.0 bits (71), Expect = 1.0 Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 1/62 (1%) Frame = +1 Query: 322 LGIAEQCARQEKILKFLMSG-SDVKELDASLLTELTGHPMLSANMGSQPYTPDDKLXVYE 498 +GI E+ Q I + L SG SDV ASLL+ ++ HP+L MG+Q + +L Sbjct: 570 IGIKEKGLPQ--IARLLQSGNSDVVRSGASLLSNMSRHPVLHRVMGNQVFPEVTRLLTSH 627 Query: 499 FG 504 G Sbjct: 628 TG 629
>POK_DROME (Q01842) Ets DNA-binding protein pokkuri (Protein yan) (Protein| anterior open) Length = 732 Score = 31.2 bits (69), Expect = 1.7 Identities = 16/33 (48%), Positives = 19/33 (57%) Frame = +1 Query: 106 KRSQQQQQDAGRSAAVQLSPQQHLLEGAYQAQQ 204 ++ QQQQQ A AAV QQH L+ Q QQ Sbjct: 314 QQQQQQQQQAAAVAAVAAQAQQHQLQQQQQQQQ 346
>KR511_HUMAN (Q6L8G4) Keratin-associated protein 5-11 (Keratin-associated| protein 5.11) (Ultrahigh sulfur keratin-associated protein 5.11) Length = 156 Score = 30.8 bits (68), Expect = 2.3 Identities = 12/35 (34%), Positives = 16/35 (45%) Frame = -3 Query: 224 GTIICRGCCAW*APSRRCCCGESCTAALLPASCCC 120 G+ C+ C S+ CCC SC + CCC Sbjct: 98 GSFCCQSSC-----SKPCCCQSSCCQSSCCKPCCC 127 Score = 29.3 bits (64), Expect = 6.6 Identities = 10/31 (32%), Positives = 14/31 (45%) Frame = -3 Query: 212 CRGCCAW*APSRRCCCGESCTAALLPASCCC 120 C+ C + + CCC SC + CCC Sbjct: 112 CQSSCCQSSCCKPCCCQSSCCQSSCFKPCCC 142
>KRA51_HUMAN (Q6L8H4) Keratin-associated protein 5-1 (Keratin-associated protein| 5.1) (Ultrahigh sulfur keratin-associated protein 5.1) Length = 278 Score = 30.8 bits (68), Expect = 2.3 Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 2/34 (5%) Frame = -3 Query: 212 CRGCCAW*APSRRCCCGESCTAALLPASCC--CC 117 C C+ + + CCC C ++ +SCC CC Sbjct: 230 CGSSCSQCSCCKPCCCSSGCGSSCCQSSCCKPCC 263
>NICE1_HUMAN (Q9UGL9) Protein NICE-1| Length = 99 Score = 30.4 bits (67), Expect = 3.0 Identities = 19/53 (35%), Positives = 20/53 (37%) Frame = -3 Query: 233 PIPGTIICRGCCAW*APSRRCCCGESCTAALLPASCCCCWDLFPWNGRTPWSS 75 P P CC S R CCG+S SCCC FP R SS Sbjct: 29 PTPAPASSSSCCG----SGRGCCGDSGCCGSSSTSCCC----FPRRRRRQRSS 73
>MT1_TETPY (O97388) Metallothionein-1 precursor (MT-1) [Contains:| Metallothionein-2 (MT-2)] Length = 107 Score = 30.0 bits (66), Expect = 3.9 Identities = 13/33 (39%), Positives = 14/33 (42%), Gaps = 1/33 (3%) Frame = -3 Query: 212 CRGCCAW*APSRRCCCGESCTAALL-PASCCCC 117 C GC CCCG+ A P S CCC Sbjct: 52 CTGCKCCEPAKSGCCCGDKAKACCTDPNSGCCC 84
>MT1_TETPI (P80394) Metallothionein-1 precursor (MT-1) [Contains:| Metallothionein-2 (MT-2)] Length = 107 Score = 30.0 bits (66), Expect = 3.9 Identities = 13/33 (39%), Positives = 14/33 (42%), Gaps = 1/33 (3%) Frame = -3 Query: 212 CRGCCAW*APSRRCCCGESCTAALL-PASCCCC 117 C GC CCCG+ A P S CCC Sbjct: 52 CTGCKCCQPAKSGCCCGDKAKACCTDPNSGCCC 84
>KRA52_HUMAN (Q701N4) Keratin-associated protein 5-2 (Keratin-associated protein| 5.2) (Ultrahigh sulfur keratin-associated protein 5.2) (Keratin-associated protein 5-8) (Keratin-associated protein 5.8) Length = 177 Score = 30.0 bits (66), Expect = 3.9 Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 3/35 (8%) Frame = -3 Query: 212 CRGC-CAW*APSRRCCCGESCTAALLPASCC--CC 117 C C C+ + + CCC C ++ +SCC CC Sbjct: 108 CGSCGCSQSSCCKPCCCSSGCGSSCCQSSCCKPCC 142
>PROS_DROVI (Q9U6A1) Protein prospero| Length = 1556 Score = 30.0 bits (66), Expect = 3.9 Identities = 21/61 (34%), Positives = 29/61 (47%) Frame = +1 Query: 31 LASATASPVLLAPSKELHGVLPFQGKRSQQQQQDAGRSAAVQLSPQQHLLEGAYQAQQPL 210 L ++ ASP L P ++ + QQQQQ A + Q QQH + A Q QQ L Sbjct: 1031 LYNSMASPFCLPPDQQ----------QQQQQQQQAAQQQQQQAVQQQH--QSAQQTQQQL 1078 Query: 211 Q 213 + Sbjct: 1079 E 1079
>KRA54_HUMAN (Q6L8H1) Keratin-associated protein 5-4 (Keratin-associated protein| 5.4) (Ultrahigh sulfur keratin-associated protein 5.4) Length = 288 Score = 30.0 bits (66), Expect = 3.9 Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 3/35 (8%) Frame = -3 Query: 212 CRGC-CAW*APSRRCCCGESCTAALLPASCC--CC 117 C C C+ + + CCC C ++ +SCC CC Sbjct: 191 CGSCGCSQCSCCKPCCCSSGCGSSCCQSSCCKPCC 225
>GEI8_CAEEL (P34333) Gex-3-interacting protein 8| Length = 1780 Score = 30.0 bits (66), Expect = 3.9 Identities = 20/52 (38%), Positives = 28/52 (53%) Frame = +1 Query: 49 SPVLLAPSKELHGVLPFQGKRSQQQQQDAGRSAAVQLSPQQHLLEGAYQAQQ 204 S +L PS+EL L + Q QQ A SAA +L+ QQ+ + A+Q Q Sbjct: 1527 STSVLQPSRELDAFLQ---QLQQNPQQYANLSAAEKLALQQYQIHSAHQKSQ 1575
>ZN330_DROME (Q9VAU9) Zinc finger protein 330 homolog (Nucleolar autoantigen 36| homolog) Length = 315 Score = 30.0 bits (66), Expect = 3.9 Identities = 13/33 (39%), Positives = 16/33 (48%) Frame = -3 Query: 215 ICRGCCAW*APSRRCCCGESCTAALLPASCCCC 117 IC C AW R+C +CT L A+C C Sbjct: 98 ICDFCEAWVCHGRKCLQNHACTCPLQNATCLEC 130
>DOCK9_MOUSE (Q8BIK4) Dedicator of cytokinesis protein 9 (Cdc42 guanine nucleotide| exchange factor zizimin 1) Length = 2055 Score = 29.6 bits (65), Expect = 5.0 Identities = 18/53 (33%), Positives = 25/53 (47%) Frame = +1 Query: 319 SLGIAEQCARQEKILKFLMSGSDVKELDASLLTELTGHPMLSANMGSQPYTPD 477 SL I CA ++I+K SDVK+L + T L M +A M P+ Sbjct: 1555 SLSIINNCANSDRIIKHTSFSSDVKDLTKRIRTVL----MATAQMKEHENDPE 1603
>TRX_DROVI (Q24742) Protein trithorax| Length = 3828 Score = 29.6 bits (65), Expect = 5.0 Identities = 19/51 (37%), Positives = 21/51 (41%) Frame = +1 Query: 73 KELHGVLPFQGKRSQQQQQDAGRSAAVQLSPQQHLLEGAYQAQQPLQMMVP 225 K HGV P Q K QQQQ + QQH + Q QQ Q P Sbjct: 2470 KSGHGVKPIQAKLQGQQQQQRHQQ---HQQHQQHQQQQQQQQQQQQQQQTP 2517
>SCR_DROME (P09077) Homeotic protein Sex combs reduced| Length = 417 Score = 29.6 bits (65), Expect = 5.0 Identities = 17/41 (41%), Positives = 22/41 (53%) Frame = +1 Query: 91 LPFQGKRSQQQQQDAGRSAAVQLSPQQHLLEGAYQAQQPLQ 213 L Q ++ QQQQQ A +AAV QQ L + + QQ Q Sbjct: 120 LLLQQQQQQQQQQHAHAAAAVAAQQQQQLAQQQHPQQQQQQ 160
>MCSP_MOUSE (P15265) Sperm mitochondrial-associated cysteine-rich protein| Length = 143 Score = 29.6 bits (65), Expect = 5.0 Identities = 16/46 (34%), Positives = 18/46 (39%), Gaps = 7/46 (15%) Frame = -3 Query: 233 PIPGTIICR---GCCAW*APSRRCCCGESCTAALLPASCC----CC 117 P P T C CC P + CC + CT P CC CC Sbjct: 61 PCPATCPCPLKPPCC----PQKCSCCPKKCTCCPQPPPCCAQPTCC 102
>MT3_YARLI (Q9HFD0) Metallothionein-3 (MT-3) (Metallothionein-III) (MT-III)| (MTPIII) Length = 55 Score = 29.3 bits (64), Expect = 6.6 Identities = 9/18 (50%), Positives = 12/18 (66%) Frame = -3 Query: 173 CCCGESCTAALLPASCCC 120 CCC S + + +PASC C Sbjct: 28 CCCSSSTSESSMPASCAC 45
>MT1_YARLI (P41927) Metallothionein-1 (MT-1) (Metallothionein-I) (MT-I)| Length = 55 Score = 29.3 bits (64), Expect = 6.6 Identities = 9/18 (50%), Positives = 12/18 (66%) Frame = -3 Query: 173 CCCGESCTAALLPASCCC 120 CCC S + + +PASC C Sbjct: 28 CCCSSSTSESSMPASCAC 45
>ZN330_HUMAN (Q9Y3S2) Zinc finger protein 330 (Nucleolar cysteine-rich protein)| (Nucleolar autoantigen 36) Length = 320 Score = 29.3 bits (64), Expect = 6.6 Identities = 14/39 (35%), Positives = 16/39 (41%), Gaps = 4/39 (10%) Frame = -3 Query: 215 ICRGCCAW*APSRRCCCGESCTAALLPASCCCC----WD 111 IC C AW R+C +C L A C C WD Sbjct: 100 ICDFCEAWVCHGRKCLSTHACACPLTDAECVECERGVWD 138
>ZN330_CRIGR (O70524) Zinc finger protein 330 (Nucleolar cysteine-rich protein)| (Nucleolar autoantigen 36) Length = 317 Score = 29.3 bits (64), Expect = 6.6 Identities = 14/39 (35%), Positives = 16/39 (41%), Gaps = 4/39 (10%) Frame = -3 Query: 215 ICRGCCAW*APSRRCCCGESCTAALLPASCCCC----WD 111 IC C AW R+C +C L A C C WD Sbjct: 100 ICDFCEAWVCHGRKCLSTHACACPLTDAECVECERGVWD 138
>ZN330_MOUSE (Q922H9) Zinc finger protein 330 (Nucleolar cysteine-rich protein)| (Nucleolar autoantigen 36) Length = 316 Score = 29.3 bits (64), Expect = 6.6 Identities = 14/39 (35%), Positives = 16/39 (41%), Gaps = 4/39 (10%) Frame = -3 Query: 215 ICRGCCAW*APSRRCCCGESCTAALLPASCCCC----WD 111 IC C AW R+C +C L A C C WD Sbjct: 100 ICDFCEAWVCHGRKCLSTHACACPLTDAECVECERGVWD 138
>HTS_DROME (Q02645) Protein hu-li tai shao (Adducin-like protein)| Length = 1156 Score = 29.3 bits (64), Expect = 6.6 Identities = 14/34 (41%), Positives = 19/34 (55%) Frame = +1 Query: 85 GVLPFQGKRSQQQQQDAGRSAAVQLSPQQHLLEG 186 G P + KR QQ +D R+ + PQ H+LEG Sbjct: 497 GTNPREFKRVQQLIKDNRRADKISAGPQSHILEG 530
>MCSP_RAT (Q64298) Sperm mitochondrial-associated cysteine-rich protein| Length = 145 Score = 28.9 bits (63), Expect = 8.6 Identities = 15/48 (31%), Positives = 17/48 (35%), Gaps = 10/48 (20%) Frame = -3 Query: 233 PIPGTIICRGCCAW*APSRRCC------CGESCTAALLPASC----CC 120 P P C CA P + CC C + CT P C CC Sbjct: 58 PCPCPATCPAACACPCPMKPCCPTKCTCCPKKCTCCPQPTCCVQPTCC 105
>INVO_MOUSE (P48997) Involucrin| Length = 467 Score = 28.9 bits (63), Expect = 8.6 Identities = 16/42 (38%), Positives = 22/42 (52%) Frame = +1 Query: 100 QGKRSQQQQQDAGRSAAVQLSPQQHLLEGAYQAQQPLQMMVP 225 Q ++ QQQQQ + Q + +Q L G Q QQ M+VP Sbjct: 134 QQQQQQQQQQQQQQQQQQQETQEQGLCLGQKQQQQQQDMLVP 175
>FOXP2_PANTR (Q8MJA0) Forkhead box protein P2| Length = 716 Score = 28.9 bits (63), Expect = 8.6 Identities = 18/52 (34%), Positives = 24/52 (46%) Frame = +1 Query: 73 KELHGVLPFQGKRSQQQQQDAGRSAAVQLSPQQHLLEGAYQAQQPLQMMVPG 228 ++LH L Q ++ QQQQQ + Q QQ + Q QQ Q PG Sbjct: 144 EQLHLQLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHPG 195
>FOXP2_PANPA (Q8HZ00) Forkhead box protein P2| Length = 716 Score = 28.9 bits (63), Expect = 8.6 Identities = 18/52 (34%), Positives = 24/52 (46%) Frame = +1 Query: 73 KELHGVLPFQGKRSQQQQQDAGRSAAVQLSPQQHLLEGAYQAQQPLQMMVPG 228 ++LH L Q ++ QQQQQ + Q QQ + Q QQ Q PG Sbjct: 144 EQLHLQLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHPG 195
>DOCK9_HUMAN (Q9BZ29) Dedicator of cytokinesis protein 9 (Cdc42 guanine nucleotide| exchange factor zizimin 1) Length = 2069 Score = 28.9 bits (63), Expect = 8.6 Identities = 17/53 (32%), Positives = 25/53 (47%) Frame = +1 Query: 319 SLGIAEQCARQEKILKFLMSGSDVKELDASLLTELTGHPMLSANMGSQPYTPD 477 SL I CA ++++K SDVK+L + T L M +A M P+ Sbjct: 1546 SLSIINNCANSDRLIKHTSFSSDVKDLTKRIRTVL----MATAQMKEHENDPE 1594
>DOCK9_RAT (Q63603) Dedicator of cytokinesis protein 9 (Cdc42 guanine| nucleotide exchange factor zizimin 1) (TRG protein) (Fragment) Length = 720 Score = 28.9 bits (63), Expect = 8.6 Identities = 17/53 (32%), Positives = 25/53 (47%) Frame = +1 Query: 319 SLGIAEQCARQEKILKFLMSGSDVKELDASLLTELTGHPMLSANMGSQPYTPD 477 SL I CA ++++K SDVK+L + T L M +A M P+ Sbjct: 127 SLSIINNCANSDRLIKHTSFSSDVKDLTKRIRTVL----MATAQMKEHENDPE 175 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.314 0.131 0.358 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 52,821,408 Number of Sequences: 219361 Number of extensions: 850237 Number of successful extensions: 2565 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 2097 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2475 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3812186532 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits)
