| Clone Name | baal16h14 |
|---|---|
| Clone Library Name | barley_pub |
>VDAC_MAIZE (P42057) Outer plastidial membrane protein porin (Voltage-dependent| anion-selective channel protein) (VDAC) Length = 277 Score = 65.1 bits (157), Expect = 5e-11 Identities = 30/38 (78%), Positives = 33/38 (86%) Frame = +2 Query: 98 MAPGLYTDIGKKTRDLLYRDYCTHQKFTLTTCTPEGVA 211 +A GLYTDIGKKTRDLLY+DY THQKF LTT +P GVA Sbjct: 3 VAVGLYTDIGKKTRDLLYKDYNTHQKFCLTTSSPNGVA 40
>VDAC1_ORYSA (Q6K548) Outer mitochondrial membrane protein porin| (Voltage-dependent anion-selective channel protein) (VDAC) Length = 273 Score = 57.4 bits (137), Expect = 1e-08 Identities = 27/38 (71%), Positives = 29/38 (76%) Frame = +2 Query: 98 MAPGLYTDIGKKTRDLLYRDYCTHQKFTLTTCTPEGVA 211 + PGLY +IGKK RDLLYRDY T KFTLTT T GVA Sbjct: 1 VGPGLYPEIGKKARDLLYRDYQTDHKFTLTTYTSNGVA 38
>VDAC_PEA (P42054) Outer plastidial membrane protein porin (Voltage-dependent| anion-selective channel protein) (VDAC) Length = 275 Score = 57.4 bits (137), Expect = 1e-08 Identities = 25/36 (69%), Positives = 31/36 (86%) Frame = +2 Query: 104 PGLYTDIGKKTRDLLYRDYCTHQKFTLTTCTPEGVA 211 PGLYTDIGKK RDLLY+DY + +KFT++T +P GVA Sbjct: 4 PGLYTDIGKKARDLLYKDYHSDKKFTISTYSPTGVA 39
>VDAC2_SOLTU (P42056) 36 kDa outer mitochondrial membrane protein porin| (Voltage-dependent anion-selective channel protein) (VDAC) (POM 36) Length = 275 Score = 55.5 bits (132), Expect = 4e-08 Identities = 25/36 (69%), Positives = 29/36 (80%) Frame = +2 Query: 104 PGLYTDIGKKTRDLLYRDYCTHQKFTLTTCTPEGVA 211 PGLY+DIGKK RDLLYRDY + KFT+TT + GVA Sbjct: 4 PGLYSDIGKKARDLLYRDYVSDHKFTVTTYSTTGVA 39
>VDAC1_ARATH (Q9SRH5) Outer mitochondrial membrane protein porin 1| (Voltage-dependent anion-selective channel protein 1) (VDAC 1) Length = 275 Score = 55.5 bits (132), Expect = 4e-08 Identities = 24/36 (66%), Positives = 31/36 (86%) Frame = +2 Query: 104 PGLYTDIGKKTRDLLYRDYCTHQKFTLTTCTPEGVA 211 PGLYT+IGKK RDLLY+D+ + QKF++TT +P GVA Sbjct: 4 PGLYTEIGKKARDLLYKDHNSDQKFSITTFSPAGVA 39
>VDAC2_ARATH (Q9SMX3) Outer mitochondrial membrane protein porin 2| (Voltage-dependent anion-selective channel protein 2) (VDAC 2) Length = 273 Score = 53.9 bits (128), Expect = 1e-07 Identities = 25/36 (69%), Positives = 29/36 (80%) Frame = +2 Query: 104 PGLYTDIGKKTRDLLYRDYCTHQKFTLTTCTPEGVA 211 PGLYT+IGKK RDLLYRDY QKF++TT + GVA Sbjct: 4 PGLYTEIGKKARDLLYRDYQGDQKFSVTTYSSTGVA 39
>VDAC1_SOLTU (P42055) 34 kDa outer mitochondrial membrane protein porin| (Voltage-dependent anion-selective channel protein) (VDAC) (POM 34) Length = 275 Score = 53.9 bits (128), Expect = 1e-07 Identities = 23/35 (65%), Positives = 29/35 (82%) Frame = +2 Query: 104 PGLYTDIGKKTRDLLYRDYCTHQKFTLTTCTPEGV 208 PGLYT+IGKK RDLLY+DY + KF++TT +P GV Sbjct: 4 PGLYTEIGKKARDLLYKDYQSDHKFSITTYSPTGV 38
>VDAC1_WHEAT (P46274) Outer mitochondrial membrane protein porin| (Voltage-dependent anion-selective channel protein) (VDAC) Length = 275 Score = 53.1 bits (126), Expect = 2e-07 Identities = 25/36 (69%), Positives = 27/36 (75%) Frame = +2 Query: 104 PGLYTDIGKKTRDLLYRDYCTHQKFTLTTCTPEGVA 211 PGLY+ IGKK +DLLYRDY T KFTLTT T G A Sbjct: 4 PGLYSGIGKKAKDLLYRDYQTDHKFTLTTYTANGPA 39
>CYSH_SYNY3 (P72794) Phosphoadenosine phosphosulfate reductase (EC 1.8.4.8)| (PAPS reductase, thioredoxin dependent) (PAdoPS reductase) (3'-phosphoadenylylsulfate reductase) (PAPS sulfotransferase) Length = 249 Score = 28.5 bits (62), Expect = 5.0 Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 5/43 (11%) Frame = +1 Query: 58 PTTDHQFVSVAGRHGSGPLHRHREEDQRSALQGL-----LHAP 171 P D +VSV H S PL H E+++ + GL LH P Sbjct: 193 PFFDQGYVSVGDWHSSRPLMAHDEDERDTRFHGLKQECGLHLP 235
>STAG2_XENLA (Q9DGN0) Cohesin subunit SA-2 (xSA-2) (Stromal antigen 2 homolog)| (SCC3 homolog 2) Length = 1194 Score = 27.7 bits (60), Expect = 8.5 Identities = 15/47 (31%), Positives = 21/47 (44%) Frame = -3 Query: 144 RSLVFFPMSV*RPGAMAAGDGDELVVSGGEKRAGERSQGKKRAAPCG 4 R V+ P+ R +A GD D + V G G ++ KK P G Sbjct: 965 REDVWLPLMSYRNSLLAGGDDDTMSVMSGMSGRGSSTRSKKIKPPTG 1011
>PSB4_SCHPO (Q9USQ9) Probable proteasome subunit beta type 4 (EC 3.4.25.1)| Length = 262 Score = 27.7 bits (60), Expect = 8.5 Identities = 12/24 (50%), Positives = 16/24 (66%) Frame = +2 Query: 137 RDLLYRDYCTHQKFTLTTCTPEGV 208 R L YRD + KF++ T TPEG+ Sbjct: 213 RVLFYRDARSLNKFSVATITPEGI 236
>CRUM2_MOUSE (Q80YA8) Crumbs homolog 2 (Crumbs-like protein 2) (Fragment)| Length = 1248 Score = 27.7 bits (60), Expect = 8.5 Identities = 15/32 (46%), Positives = 18/32 (56%) Frame = -1 Query: 170 GACSSPCRADLWSSSRCRCRGPEPWRPATETN 75 GAC DLW+ RC C P P+R AT T+ Sbjct: 588 GAC-----VDLWTHFRCDC--PRPYRGATCTD 612
>VDAC_DICDI (Q01501) Outer mitochondrial membrane protein porin| (Voltage-dependent anion-selective channel protein) (VDAC) Length = 275 Score = 27.7 bits (60), Expect = 8.5 Identities = 12/30 (40%), Positives = 16/30 (53%) Frame = +2 Query: 98 MAPGLYTDIGKKTRDLLYRDYCTHQKFTLT 187 M PGLY D+ K T D + +D+ K T Sbjct: 1 MNPGLYADLTKPTADFIKKDFAETFKLDTT 30 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.316 0.132 0.399 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 25,721,459 Number of Sequences: 219361 Number of extensions: 392459 Number of successful extensions: 1195 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 1132 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1193 length of database: 80,573,946 effective HSP length: 47 effective length of database: 70,263,979 effective search space used: 1686335496 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits)