ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal16h14
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1VDAC_MAIZE (P42057) Outer plastidial membrane protein porin (Vol... 65 5e-11
2VDAC1_ORYSA (Q6K548) Outer mitochondrial membrane protein porin ... 57 1e-08
3VDAC_PEA (P42054) Outer plastidial membrane protein porin (Volta... 57 1e-08
4VDAC2_SOLTU (P42056) 36 kDa outer mitochondrial membrane protein... 55 4e-08
5VDAC1_ARATH (Q9SRH5) Outer mitochondrial membrane protein porin ... 55 4e-08
6VDAC2_ARATH (Q9SMX3) Outer mitochondrial membrane protein porin ... 54 1e-07
7VDAC1_SOLTU (P42055) 34 kDa outer mitochondrial membrane protein... 54 1e-07
8VDAC1_WHEAT (P46274) Outer mitochondrial membrane protein porin ... 53 2e-07
9CYSH_SYNY3 (P72794) Phosphoadenosine phosphosulfate reductase (E... 28 5.0
10STAG2_XENLA (Q9DGN0) Cohesin subunit SA-2 (xSA-2) (Stromal antig... 28 8.5
11PSB4_SCHPO (Q9USQ9) Probable proteasome subunit beta type 4 (EC ... 28 8.5
12CRUM2_MOUSE (Q80YA8) Crumbs homolog 2 (Crumbs-like protein 2) (F... 28 8.5
13VDAC_DICDI (Q01501) Outer mitochondrial membrane protein porin (... 28 8.5

>VDAC_MAIZE (P42057) Outer plastidial membrane protein porin (Voltage-dependent|
           anion-selective channel protein) (VDAC)
          Length = 277

 Score = 65.1 bits (157), Expect = 5e-11
 Identities = 30/38 (78%), Positives = 33/38 (86%)
 Frame = +2

Query: 98  MAPGLYTDIGKKTRDLLYRDYCTHQKFTLTTCTPEGVA 211
           +A GLYTDIGKKTRDLLY+DY THQKF LTT +P GVA
Sbjct: 3   VAVGLYTDIGKKTRDLLYKDYNTHQKFCLTTSSPNGVA 40



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>VDAC1_ORYSA (Q6K548) Outer mitochondrial membrane protein porin|
           (Voltage-dependent anion-selective channel protein)
           (VDAC)
          Length = 273

 Score = 57.4 bits (137), Expect = 1e-08
 Identities = 27/38 (71%), Positives = 29/38 (76%)
 Frame = +2

Query: 98  MAPGLYTDIGKKTRDLLYRDYCTHQKFTLTTCTPEGVA 211
           + PGLY +IGKK RDLLYRDY T  KFTLTT T  GVA
Sbjct: 1   VGPGLYPEIGKKARDLLYRDYQTDHKFTLTTYTSNGVA 38



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>VDAC_PEA (P42054) Outer plastidial membrane protein porin (Voltage-dependent|
           anion-selective channel protein) (VDAC)
          Length = 275

 Score = 57.4 bits (137), Expect = 1e-08
 Identities = 25/36 (69%), Positives = 31/36 (86%)
 Frame = +2

Query: 104 PGLYTDIGKKTRDLLYRDYCTHQKFTLTTCTPEGVA 211
           PGLYTDIGKK RDLLY+DY + +KFT++T +P GVA
Sbjct: 4   PGLYTDIGKKARDLLYKDYHSDKKFTISTYSPTGVA 39



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>VDAC2_SOLTU (P42056) 36 kDa outer mitochondrial membrane protein porin|
           (Voltage-dependent anion-selective channel protein)
           (VDAC) (POM 36)
          Length = 275

 Score = 55.5 bits (132), Expect = 4e-08
 Identities = 25/36 (69%), Positives = 29/36 (80%)
 Frame = +2

Query: 104 PGLYTDIGKKTRDLLYRDYCTHQKFTLTTCTPEGVA 211
           PGLY+DIGKK RDLLYRDY +  KFT+TT +  GVA
Sbjct: 4   PGLYSDIGKKARDLLYRDYVSDHKFTVTTYSTTGVA 39



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>VDAC1_ARATH (Q9SRH5) Outer mitochondrial membrane protein porin 1|
           (Voltage-dependent anion-selective channel protein 1)
           (VDAC 1)
          Length = 275

 Score = 55.5 bits (132), Expect = 4e-08
 Identities = 24/36 (66%), Positives = 31/36 (86%)
 Frame = +2

Query: 104 PGLYTDIGKKTRDLLYRDYCTHQKFTLTTCTPEGVA 211
           PGLYT+IGKK RDLLY+D+ + QKF++TT +P GVA
Sbjct: 4   PGLYTEIGKKARDLLYKDHNSDQKFSITTFSPAGVA 39



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>VDAC2_ARATH (Q9SMX3) Outer mitochondrial membrane protein porin 2|
           (Voltage-dependent anion-selective channel protein 2)
           (VDAC 2)
          Length = 273

 Score = 53.9 bits (128), Expect = 1e-07
 Identities = 25/36 (69%), Positives = 29/36 (80%)
 Frame = +2

Query: 104 PGLYTDIGKKTRDLLYRDYCTHQKFTLTTCTPEGVA 211
           PGLYT+IGKK RDLLYRDY   QKF++TT +  GVA
Sbjct: 4   PGLYTEIGKKARDLLYRDYQGDQKFSVTTYSSTGVA 39



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>VDAC1_SOLTU (P42055) 34 kDa outer mitochondrial membrane protein porin|
           (Voltage-dependent anion-selective channel protein)
           (VDAC) (POM 34)
          Length = 275

 Score = 53.9 bits (128), Expect = 1e-07
 Identities = 23/35 (65%), Positives = 29/35 (82%)
 Frame = +2

Query: 104 PGLYTDIGKKTRDLLYRDYCTHQKFTLTTCTPEGV 208
           PGLYT+IGKK RDLLY+DY +  KF++TT +P GV
Sbjct: 4   PGLYTEIGKKARDLLYKDYQSDHKFSITTYSPTGV 38



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>VDAC1_WHEAT (P46274) Outer mitochondrial membrane protein porin|
           (Voltage-dependent anion-selective channel protein)
           (VDAC)
          Length = 275

 Score = 53.1 bits (126), Expect = 2e-07
 Identities = 25/36 (69%), Positives = 27/36 (75%)
 Frame = +2

Query: 104 PGLYTDIGKKTRDLLYRDYCTHQKFTLTTCTPEGVA 211
           PGLY+ IGKK +DLLYRDY T  KFTLTT T  G A
Sbjct: 4   PGLYSGIGKKAKDLLYRDYQTDHKFTLTTYTANGPA 39



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>CYSH_SYNY3 (P72794) Phosphoadenosine phosphosulfate reductase (EC 1.8.4.8)|
           (PAPS reductase, thioredoxin dependent) (PAdoPS
           reductase) (3'-phosphoadenylylsulfate reductase) (PAPS
           sulfotransferase)
          Length = 249

 Score = 28.5 bits (62), Expect = 5.0
 Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 5/43 (11%)
 Frame = +1

Query: 58  PTTDHQFVSVAGRHGSGPLHRHREEDQRSALQGL-----LHAP 171
           P  D  +VSV   H S PL  H E+++ +   GL     LH P
Sbjct: 193 PFFDQGYVSVGDWHSSRPLMAHDEDERDTRFHGLKQECGLHLP 235



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>STAG2_XENLA (Q9DGN0) Cohesin subunit SA-2 (xSA-2) (Stromal antigen 2 homolog)|
            (SCC3 homolog 2)
          Length = 1194

 Score = 27.7 bits (60), Expect = 8.5
 Identities = 15/47 (31%), Positives = 21/47 (44%)
 Frame = -3

Query: 144  RSLVFFPMSV*RPGAMAAGDGDELVVSGGEKRAGERSQGKKRAAPCG 4
            R  V+ P+   R   +A GD D + V  G    G  ++ KK   P G
Sbjct: 965  REDVWLPLMSYRNSLLAGGDDDTMSVMSGMSGRGSSTRSKKIKPPTG 1011



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>PSB4_SCHPO (Q9USQ9) Probable proteasome subunit beta type 4 (EC 3.4.25.1)|
          Length = 262

 Score = 27.7 bits (60), Expect = 8.5
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +2

Query: 137 RDLLYRDYCTHQKFTLTTCTPEGV 208
           R L YRD  +  KF++ T TPEG+
Sbjct: 213 RVLFYRDARSLNKFSVATITPEGI 236



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>CRUM2_MOUSE (Q80YA8) Crumbs homolog 2 (Crumbs-like protein 2) (Fragment)|
          Length = 1248

 Score = 27.7 bits (60), Expect = 8.5
 Identities = 15/32 (46%), Positives = 18/32 (56%)
 Frame = -1

Query: 170 GACSSPCRADLWSSSRCRCRGPEPWRPATETN 75
           GAC      DLW+  RC C  P P+R AT T+
Sbjct: 588 GAC-----VDLWTHFRCDC--PRPYRGATCTD 612



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>VDAC_DICDI (Q01501) Outer mitochondrial membrane protein porin|
           (Voltage-dependent anion-selective channel protein)
           (VDAC)
          Length = 275

 Score = 27.7 bits (60), Expect = 8.5
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +2

Query: 98  MAPGLYTDIGKKTRDLLYRDYCTHQKFTLT 187
           M PGLY D+ K T D + +D+    K   T
Sbjct: 1   MNPGLYADLTKPTADFIKKDFAETFKLDTT 30


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.316    0.132    0.399 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,721,459
Number of Sequences: 219361
Number of extensions: 392459
Number of successful extensions: 1195
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1193
length of database: 80,573,946
effective HSP length: 47
effective length of database: 70,263,979
effective search space used: 1686335496
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
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