ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal16h03 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_482865.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1865 Score = 83.8 bits (42), Expect = 3e-13 Identities = 48/50 (96%) Strand = Plus / Plus Query: 9 ggcaccccgcactcctggccgccgctcctctctatcctctactggctcac 58 |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 413 ggcaccccgcactcctggccgccgctcctctccgtcctctactggctcac 462
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 83.8 bits (42), Expect = 3e-13 Identities = 48/50 (96%) Strand = Plus / Plus Query: 9 ggcaccccgcactcctggccgccgctcctctctatcctctactggctcac 58 |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 23034055 ggcaccccgcactcctggccgccgctcctctccgtcctctactggctcac 23034104 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 ccacgcctcccctcccgcccc 106 ||||||||||||||||||||| Sbjct: 6181114 ccacgcctcccctcccgcccc 6181134 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 86 ccacgcctcccctcccgcccc 106 ||||||||||||||||||||| Sbjct: 3973529 ccacgcctcccctcccgcccc 3973509 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 ccgcccccgcctccgcctcc 119 |||||||||||||||||||| Sbjct: 21848812 ccgcccccgcctccgcctcc 21848793
>dbj|AP004585.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0470B03 Length = 163371 Score = 83.8 bits (42), Expect = 3e-13 Identities = 48/50 (96%) Strand = Plus / Plus Query: 9 ggcaccccgcactcctggccgccgctcctctctatcctctactggctcac 58 |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 93783 ggcaccccgcactcctggccgccgctcctctccgtcctctactggctcac 93832
>dbj|AK063363.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-114-D04, full insert sequence Length = 1865 Score = 83.8 bits (42), Expect = 3e-13 Identities = 48/50 (96%) Strand = Plus / Plus Query: 9 ggcaccccgcactcctggccgccgctcctctctatcctctactggctcac 58 |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 413 ggcaccccgcactcctggccgccgctcctctccgtcctctactggctcac 462
>ref|XM_475441.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1371 Score = 50.1 bits (25), Expect = 0.004 Identities = 35/37 (94%), Gaps = 1/37 (2%) Strand = Plus / Plus Query: 83 cctccacgcctcccctcccgcccccgcctccgcctcc 119 |||||||||||| || ||||||||||||||||||||| Sbjct: 73 cctccacgcctcgcc-cccgcccccgcctccgcctcc 108
>gb|AC118289.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0099O15, complete sequence Length = 137357 Score = 50.1 bits (25), Expect = 0.004 Identities = 35/37 (94%), Gaps = 1/37 (2%) Strand = Plus / Plus Query: 83 cctccacgcctcccctcccgcccccgcctccgcctcc 119 |||||||||||| || ||||||||||||||||||||| Sbjct: 65248 cctccacgcctcgcc-cccgcccccgcctccgcctcc 65283
>emb|AL953889.9| Human DNA sequence from clone RP11-7G23 on chromosome 9 Contains six novel pseudogenes, the FAM27A gene for family with sequence similarity 27, member A, a novel gene and five CpG islands, complete sequence Length = 160730 Score = 50.1 bits (25), Expect = 0.004 Identities = 25/25 (100%) Strand = Plus / Plus Query: 89 cgcctcccctcccgcccccgcctcc 113 ||||||||||||||||||||||||| Sbjct: 74716 cgcctcccctcccgcccccgcctcc 74740 Score = 50.1 bits (25), Expect = 0.004 Identities = 25/25 (100%) Strand = Plus / Plus Query: 89 cgcctcccctcccgcccccgcctcc 113 ||||||||||||||||||||||||| Sbjct: 74680 cgcctcccctcccgcccccgcctcc 74704 Score = 50.1 bits (25), Expect = 0.004 Identities = 25/25 (100%) Strand = Plus / Plus Query: 89 cgcctcccctcccgcccccgcctcc 113 ||||||||||||||||||||||||| Sbjct: 74662 cgcctcccctcccgcccccgcctcc 74686 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 89 cgcctcccctcccgcccccgcctcc 113 |||||||||||||||| |||||||| Sbjct: 74698 cgcctcccctcccgcctccgcctcc 74722
>emb|BX005037.5| Human DNA sequence from clone RP11-34H11 on chromosome 9 Contains two CpG islands, complete sequence Length = 173181 Score = 50.1 bits (25), Expect = 0.004 Identities = 25/25 (100%) Strand = Plus / Minus Query: 89 cgcctcccctcccgcccccgcctcc 113 ||||||||||||||||||||||||| Sbjct: 81290 cgcctcccctcccgcccccgcctcc 81266
>emb|AL627230.15| Human DNA sequence from clone RP11-12A20 on chromosome 9 Contains six novel pseudogenes, the FAM27B gene for family with sequence similarity 27, member B, a pseudogene similar to part of ribosomal protein L10 (RPL10) and four CpG islands, complete sequence Length = 194246 Score = 50.1 bits (25), Expect = 0.004 Identities = 25/25 (100%) Strand = Plus / Plus Query: 89 cgcctcccctcccgcccccgcctcc 113 ||||||||||||||||||||||||| Sbjct: 82777 cgcctcccctcccgcccccgcctcc 82801
>emb|AL591926.8| Human DNA sequence from clone RP11-157L3 on chromosome 9 Contains five novel pseudogenes, a pseudogene similar to part of ribosomal protein L10 (RPL10) and two CpG islands, complete sequence Length = 182366 Score = 50.1 bits (25), Expect = 0.004 Identities = 25/25 (100%) Strand = Plus / Plus Query: 89 cgcctcccctcccgcccccgcctcc 113 ||||||||||||||||||||||||| Sbjct: 91884 cgcctcccctcccgcccccgcctcc 91908
>emb|AL391987.15| Human DNA sequence from clone RP11-374M1 on chromosome 9 Contains the FAM27C gene for family with sequence similarity 27, member C, three novel genes, five novel pseudogenes and six CpG islands, complete sequence Length = 202081 Score = 50.1 bits (25), Expect = 0.004 Identities = 25/25 (100%) Strand = Plus / Plus Query: 89 cgcctcccctcccgcccccgcctcc 113 ||||||||||||||||||||||||| Sbjct: 154989 cgcctcccctcccgcccccgcctcc 155013
>emb|AL162731.33| Human DNA sequence from clone RP11-292F9 on chromosome 9 Contains four novel genes, three novel pseudogenes and two CpG islands, complete sequence Length = 188062 Score = 50.1 bits (25), Expect = 0.004 Identities = 25/25 (100%) Strand = Plus / Plus Query: 89 cgcctcccctcccgcccccgcctcc 113 ||||||||||||||||||||||||| Sbjct: 113320 cgcctcccctcccgcccccgcctcc 113344
>emb|AL121762.13|HSJ610C12 Human DNA sequence from clone RP4-610C12 on chromosome 20 Contains the 3' end of a novel gene, a putative novel gene, a pseudogene similar to part of the cystic fibrosis transmembrane conductance regulator (CFTR), four CpG islands, ESTs, STSs and GSSs, complete sequence Length = 164521 Score = 50.1 bits (25), Expect = 0.004 Identities = 25/25 (100%) Strand = Plus / Plus Query: 89 cgcctcccctcccgcccccgcctcc 113 ||||||||||||||||||||||||| Sbjct: 58777 cgcctcccctcccgcccccgcctcc 58801
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 50.1 bits (25), Expect = 0.004 Identities = 35/37 (94%), Gaps = 1/37 (2%) Strand = Plus / Plus Query: 83 cctccacgcctcccctcccgcccccgcctccgcctcc 119 |||||||||||| || ||||||||||||||||||||| Sbjct: 23675243 cctccacgcctcgcc-cccgcccccgcctccgcctcc 23675278 Score = 46.1 bits (23), Expect = 0.070 Identities = 29/31 (93%) Strand = Plus / Minus Query: 89 cgcctcccctcccgcccccgcctccgcctcc 119 |||||| |||||||||||| ||||||||||| Sbjct: 27225527 cgcctctcctcccgcccccacctccgcctcc 27225497 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 95 ccctcccgcccccgcctccgcctcc 119 |||||||||| |||||||||||||| Sbjct: 11334017 ccctcccgcctccgcctccgcctcc 11334041 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 ccacgcctcccctcccgccc 105 |||||||||||||||||||| Sbjct: 4897438 ccacgcctcccctcccgccc 4897457
>gb|AC023794.37| Homo sapiens 12 BAC RP11-834C11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 198488 Score = 50.1 bits (25), Expect = 0.004 Identities = 25/25 (100%) Strand = Plus / Minus Query: 89 cgcctcccctcccgcccccgcctcc 113 ||||||||||||||||||||||||| Sbjct: 50309 cgcctcccctcccgcccccgcctcc 50285
>dbj|AK111182.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-177-G04, full insert sequence Length = 1667 Score = 50.1 bits (25), Expect = 0.004 Identities = 35/37 (94%), Gaps = 1/37 (2%) Strand = Plus / Plus Query: 83 cctccacgcctcccctcccgcccccgcctccgcctcc 119 |||||||||||| || ||||||||||||||||||||| Sbjct: 106 cctccacgcctcgcc-cccgcccccgcctccgcctcc 141
>emb|AJ331072.1|HSA331072 Homo sapiens genomic sequence surrounding NotI site, clone NL6-GF1C Length = 665 Score = 50.1 bits (25), Expect = 0.004 Identities = 25/25 (100%) Strand = Plus / Minus Query: 89 cgcctcccctcccgcccccgcctcc 113 ||||||||||||||||||||||||| Sbjct: 80 cgcctcccctcccgcccccgcctcc 56
>emb|AL118524.25|HSJ1059A9 Human DNA sequence from clone RP5-1059A9 on chromosome 9. Contains two putative novel genes, ESTs, STSs and GSSs, complete sequence Length = 99858 Score = 50.1 bits (25), Expect = 0.004 Identities = 25/25 (100%) Strand = Plus / Minus Query: 89 cgcctcccctcccgcccccgcctcc 113 ||||||||||||||||||||||||| Sbjct: 34199 cgcctcccctcccgcccccgcctcc 34175 Score = 50.1 bits (25), Expect = 0.004 Identities = 25/25 (100%) Strand = Plus / Minus Query: 89 cgcctcccctcccgcccccgcctcc 113 ||||||||||||||||||||||||| Sbjct: 34181 cgcctcccctcccgcccccgcctcc 34157
>emb|AJ333299.1|HSA333299 Homo sapiens genomic sequence surrounding NotI site, clone NL6-LH7C Length = 660 Score = 48.1 bits (24), Expect = 0.018 Identities = 24/24 (100%) Strand = Plus / Minus Query: 90 gcctcccctcccgcccccgcctcc 113 |||||||||||||||||||||||| Sbjct: 79 gcctcccctcccgcccccgcctcc 56
>ref|XM_475863.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2397 Score = 46.1 bits (23), Expect = 0.070 Identities = 29/31 (93%) Strand = Plus / Plus Query: 89 cgcctcccctcccgcccccgcctccgcctcc 119 |||||| |||||||||||| ||||||||||| Sbjct: 37 cgcctctcctcccgcccccacctccgcctcc 67
>gb|AC129717.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0079H23, complete sequence Length = 191765 Score = 46.1 bits (23), Expect = 0.070 Identities = 29/31 (93%) Strand = Plus / Minus Query: 89 cgcctcccctcccgcccccgcctccgcctcc 119 |||||| |||||||||||| ||||||||||| Sbjct: 100495 cgcctctcctcccgcccccacctccgcctcc 100465
>gb|AC135925.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0560C03, complete sequence Length = 177861 Score = 46.1 bits (23), Expect = 0.070 Identities = 29/31 (93%) Strand = Plus / Minus Query: 89 cgcctcccctcccgcccccgcctccgcctcc 119 |||||| |||||||||||| ||||||||||| Sbjct: 156923 cgcctctcctcccgcccccacctccgcctcc 156893
>emb|AL109754.13|HSDJ839B4 Human DNA sequence from clone RP5-839B4 on chromosome 20 Contains the 3' end of a novel gene, part of a novel gene, the ANKRD5 gene for ankyrin repeat domain 5 and a CpG island, complete sequence Length = 165010 Score = 46.1 bits (23), Expect = 0.070 Identities = 29/31 (93%) Strand = Plus / Minus Query: 89 cgcctcccctcccgcccccgcctccgcctcc 119 ||||||| | ||||||||||||||||||||| Sbjct: 57302 cgcctccgcccccgcccccgcctccgcctcc 57272
>gb|AC073172.5| Homo sapiens chromosome 11, clone RP11-531H8, complete sequence Length = 168080 Score = 46.1 bits (23), Expect = 0.070 Identities = 23/23 (100%) Strand = Plus / Minus Query: 133 cctacctcacccagggctactgc 155 ||||||||||||||||||||||| Sbjct: 44324 cctacctcacccagggctactgc 44302
>gb|AC025839.12| Homo sapiens chromosome 8, clone RP11-370K2, complete sequence Length = 178009 Score = 46.1 bits (23), Expect = 0.070 Identities = 26/27 (96%) Strand = Plus / Plus Query: 83 cctccacgcctcccctcccgcccccgc 109 ||||||||||| ||||||||||||||| Sbjct: 148818 cctccacgccttccctcccgcccccgc 148844
>ref|XM_469028.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1922 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Minus Query: 94 cccctcccgcccccgcctccgcctcc 119 ||||||||||| |||||||||||||| Sbjct: 62 cccctcccgcctccgcctccgcctcc 37
>gb|AC145381.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0024K17 map near S16403, complete sequence Length = 172238 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Plus Query: 94 cccctcccgcccccgcctccgcctcc 119 ||||||||||| |||||||||||||| Sbjct: 131843 cccctcccgcctccgcctccgcctcc 131868
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Plus Query: 94 cccctcccgcccccgcctccgcctcc 119 ||||||||||| |||||||||||||| Sbjct: 25015398 cccctcccgcctccgcctccgcctcc 25015423 Score = 40.1 bits (20), Expect = 4.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 92 ctcccctcccgcccccgcctccgcctcc 119 ||||||||| ||||||||||||||||| Sbjct: 28664139 ctcccctccttcccccgcctccgcctcc 28664166
>gb|AC113554.9| Homo sapiens chromosome 17, clone CTD-2501B8, complete sequence Length = 179509 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 92 ctcccctcccgcccccgcctcc 113 |||||||||||||||||||||| Sbjct: 72532 ctcccctcccgcccccgcctcc 72553
>gb|AC138001.2| Oryza sativa chromosome 3 BAC OSJNBa0093M23 genomic sequence, complete sequence Length = 170020 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Plus Query: 94 cccctcccgcccccgcctccgcctcc 119 ||||||||||| |||||||||||||| Sbjct: 47205 cccctcccgcctccgcctccgcctcc 47230
>gb|AC153372.5| Mus musculus 6 BAC RP23-358G19 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 230623 Score = 44.1 bits (22), Expect = 0.28 Identities = 28/30 (93%) Strand = Plus / Plus Query: 89 cgcctcccctcccgcccccgcctccgcctc 118 ||||||| | |||||||||||||||||||| Sbjct: 77609 cgcctccgcccccgcccccgcctccgcctc 77638
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Plus Query: 94 cccctcccgcccccgcctccgcctcc 119 ||||||||||| |||||||||||||| Sbjct: 25106715 cccctcccgcctccgcctccgcctcc 25106740 Score = 40.1 bits (20), Expect = 4.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 92 ctcccctcccgcccccgcctccgcctcc 119 ||||||||| ||||||||||||||||| Sbjct: 28755463 ctcccctccttcccccgcctccgcctcc 28755490
>gb|AC108022.3| Homo sapiens BAC clone RP11-9D8 from 4, complete sequence Length = 162609 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 99 cccgcccccgcctccgcctcca 120 |||||||||||||||||||||| Sbjct: 153502 cccgcccccgcctccgcctcca 153523
>dbj|AK068866.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001M15, full insert sequence Length = 1922 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Minus Query: 94 cccctcccgcccccgcctccgcctcc 119 ||||||||||| |||||||||||||| Sbjct: 62 cccctcccgcctccgcctccgcctcc 37
>ref|XM_480610.1| Oryza sativa (japonica cultivar-group), mRNA Length = 462 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 ccacgcctcccctcccgcccc 106 ||||||||||||||||||||| Sbjct: 348 ccacgcctcccctcccgcccc 368
>ref|XM_476260.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 855 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 95 ccctcccgcccccgcctccgcctcc 119 |||||||||| |||||||||||||| Sbjct: 195 ccctcccgcctccgcctccgcctcc 219
>ref|NM_197313.1| Oryza sativa (japonica cultivar-group) putative proteophosphoglycan (OSJNBa0055O03.3), mRNA Length = 2229 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 cccgcccccgcctccgcctcc 119 ||||||||||||||||||||| Sbjct: 162 cccgcccccgcctccgcctcc 182
>gb|BT018273.1| Zea mays clone EL01T0203E03.c mRNA sequence Length = 1321 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 cccgcccccgcctccgcctcc 119 ||||||||||||||||||||| Sbjct: 207 cccgcccccgcctccgcctcc 227
>gb|AC145273.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0055E23, complete sequence Length = 156572 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 95 ccctcccgcccccgcctccgcctcc 119 |||||||||| |||||||||||||| Sbjct: 59294 ccctcccgcctccgcctccgcctcc 59318
>gb|AC127416.7| Mus musculus BAC clone RP23-457J22 from chromosome 8, complete sequence Length = 206997 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 cccgcccccgcctccgcctcc 119 ||||||||||||||||||||| Sbjct: 44888 cccgcccccgcctccgcctcc 44908
>gb|AY230352.1| Triticum aestivum clone 4S-G7 nonfunctional FCA protein (Fca) mRNA, partial sequence Length = 2244 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 96 cctcccgcccccgcctccgcc 116 ||||||||||||||||||||| Sbjct: 193 cctcccgcccccgcctccgcc 173
>ref|XM_980224.1| PREDICTED: Mus musculus hypothetical protein LOC665906 (LOC665906), mRNA Length = 900 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 99 cccgcccccgcctccgcctcc 119 ||||||||||||||||||||| Sbjct: 106 cccgcccccgcctccgcctcc 86
>ref|XM_980303.1| PREDICTED: Mus musculus hypothetical protein LOC675225 (LOC675225), mRNA Length = 954 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 cccgcccccgcctccgcctcc 119 ||||||||||||||||||||| Sbjct: 868 cccgcccccgcctccgcctcc 888
>gb|AC073867.6| Oryza sativa chromosome 10 BAC OSJNBa0055O03 genomic sequence, complete sequence Length = 82909 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 cccgcccccgcctccgcctcc 119 ||||||||||||||||||||| Sbjct: 37227 cccgcccccgcctccgcctcc 37247
>emb|CR848835.7| Zebrafish DNA sequence from clone DKEY-71G12 in linkage group 15, complete sequence Length = 216994 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 99 cccgcccccgcctccgcctcc 119 ||||||||||||||||||||| Sbjct: 55586 cccgcccccgcctccgcctcc 55566
>gb|AC132474.3| Mus musculus BAC clone RP23-114G13 from chromosome 9, complete sequence Length = 220976 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 cccgcccccgcctccgcctcc 119 ||||||||||||||||||||| Sbjct: 121894 cccgcccccgcctccgcctcc 121914
>emb|CR352235.8| Zebrafish DNA sequence from clone DKEY-14A21 in linkage group 12, complete sequence Length = 83709 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 99 cccgcccccgcctccgcctcc 119 ||||||||||||||||||||| Sbjct: 17453 cccgcccccgcctccgcctcc 17433
>emb|CR788266.6| Zebrafish DNA sequence from clone DKEY-199A23 in linkage group 14, complete sequence Length = 143937 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 cccgcccccgcctccgcctcc 119 ||||||||||||||||||||| Sbjct: 10155 cccgcccccgcctccgcctcc 10175
>emb|BX511311.24| Zebrafish DNA sequence from clone DKEY-278G4 in linkage group 8, complete sequence Length = 242845 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 99 cccgcccccgcctccgcctcc 119 ||||||||||||||||||||| Sbjct: 150203 cccgcccccgcctccgcctcc 150183
>gb|AC146073.2| Pan troglodytes BAC clone RP43-15A16 from 7, complete sequence Length = 138338 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 89 cgcctcccctcccgcccccgcctcc 113 ||||||||||| ||||||||||||| Sbjct: 64161 cgcctcccctctcgcccccgcctcc 64185
>gb|AC160547.6| Mus musculus chromosome 8, clone RP23-240F23, complete sequence Length = 170722 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 cccgcccccgcctccgcctcc 119 ||||||||||||||||||||| Sbjct: 15296 cccgcccccgcctccgcctcc 15316
>emb|AL133481.14| Human DNA sequence from clone RP11-342M3 on chromosome 10 Contains the 3' end of the PPIF gene for peptidylprolyl isomerase F (cyclophilin F), gene FLJ90798, the EIF5AP1 pseudogene for eukaryotic translation initiation factor 5A pseudogene 1, a novel gene, a novel pseudogene and a CpG island, complete sequence Length = 167234 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 cccgcccccgcctccgcctcc 119 ||||||||||||||||||||| Sbjct: 96207 cccgcccccgcctccgcctcc 96227
>emb|AL008718.23|HS268H5 Human DNA sequence from clone CTA-268H5 on chromosome 22q13.2-13.3, complete sequence Length = 188833 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 99 cccgcccccgcctccgcctcc 119 ||||||||||||||||||||| Sbjct: 90936 cccgcccccgcctccgcctcc 90916
>gb|AC133618.3| Rattus norvegicus 18 BAC CH230-71N8 (Children's Hospital Oakland Research Institute) complete sequence Length = 234684 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 cccgcccccgcctccgcctcc 119 ||||||||||||||||||||| Sbjct: 130527 cccgcccccgcctccgcctcc 130547
>emb|AL731614.4|OSJN00260 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0079F16, complete sequence Length = 157801 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 91 cctcccctcccgcccccgcctccgcctcc 119 ||||||||||| ||||| ||||||||||| Sbjct: 90336 cctcccctccctcccccacctccgcctcc 90364
>emb|AL731623.3|OSJN00263 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0083D01, complete sequence Length = 148353 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 91 cctcccctcccgcccccgcctccgcctcc 119 ||||||| ||||||||||||||| ||||| Sbjct: 44510 cctccccgcccgcccccgcctccccctcc 44538
>emb|CR391999.9| Zebrafish DNA sequence from clone CH211-261L7 in linkage group 5, complete sequence Length = 176753 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 cccgcccccgcctccgcctcc 119 ||||||||||||||||||||| Sbjct: 50310 cccgcccccgcctccgcctcc 50330
>emb|BX957274.8| Zebrafish DNA sequence from clone DKEY-155F10 in linkage group 9, complete sequence Length = 216817 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 99 cccgcccccgcctccgcctcc 119 ||||||||||||||||||||| Sbjct: 128448 cccgcccccgcctccgcctcc 128428
>emb|AL954259.1| Pan troglodytes chromosome 22 clone PTB-152N20 map 22q22.3, complete sequence Length = 56500 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 99 cccgcccccgcctccgcctcc 119 ||||||||||||||||||||| Sbjct: 53051 cccgcccccgcctccgcctcc 53031
>emb|CR352253.9| Zebrafish DNA sequence from clone CH211-267D1 in linkage group 13, complete sequence Length = 160748 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 cccgcccccgcctccgcctcc 119 ||||||||||||||||||||| Sbjct: 147158 cccgcccccgcctccgcctcc 147178
>emb|BX537296.9| Zebrafish DNA sequence from clone DKEYP-86D4 in linkage group 14, complete sequence Length = 203251 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 99 cccgcccccgcctccgcctcc 119 ||||||||||||||||||||| Sbjct: 67978 cccgcccccgcctccgcctcc 67958
>emb|BX640470.7| Zebrafish DNA sequence from clone CH211-205H10 in linkage group 11, complete sequence Length = 131868 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 99 cccgcccccgcctccgcctcc 119 ||||||||||||||||||||| Sbjct: 11073 cccgcccccgcctccgcctcc 11053
>emb|BX322792.11| Zebrafish DNA sequence from clone CH211-261I17, complete sequence Length = 174226 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 cccgcccccgcctccgcctcc 119 ||||||||||||||||||||| Sbjct: 159124 cccgcccccgcctccgcctcc 159144
>emb|AL772144.4| Zebrafish DNA sequence from clone CH211-164J3 in linkage group 3 Contains three CpG islands, complete sequence Length = 153837 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 cccgcccccgcctccgcctcc 119 ||||||||||||||||||||| Sbjct: 81265 cccgcccccgcctccgcctcc 81285
>emb|BX321916.14| Zebrafish DNA sequence from clone DKEYP-57E9 in linkage group 20 Contains two CpG islands, complete sequence Length = 120807 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 cccgcccccgcctccgcctcc 119 ||||||||||||||||||||| Sbjct: 20876 cccgcccccgcctccgcctcc 20896
>emb|AL772332.6| Zebrafish DNA sequence from clone CH211-150A22 in linkage group 1 Contains part of a gene similar to human PET112 for PET112-like protein from yeast, two novel genes and seven CpG islands, complete sequence Length = 175762 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 99 cccgcccccgcctccgcctcc 119 ||||||||||||||||||||| Sbjct: 119163 cccgcccccgcctccgcctcc 119143
>emb|BX296553.6| Zebrafish DNA sequence from clone CH211-222G19 in linkage group 8, complete sequence Length = 108215 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 cccgcccccgcctccgcctcc 119 ||||||||||||||||||||| Sbjct: 91368 cccgcccccgcctccgcctcc 91388
>emb|BX571803.23| Zebrafish DNA sequence from clone DKEY-273G3 in linkage group 9, complete sequence Length = 241708 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 99 cccgcccccgcctccgcctcc 119 ||||||||||||||||||||| Sbjct: 148370 cccgcccccgcctccgcctcc 148350
>emb|BX571730.9| Zebrafish DNA sequence from clone DKEY-35I22 in linkage group 5, complete sequence Length = 160875 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 cccgcccccgcctccgcctcc 119 ||||||||||||||||||||| Sbjct: 13605 cccgcccccgcctccgcctcc 13625
>emb|BX005385.13| Zebrafish DNA sequence from clone DKEY-180N16, complete sequence Length = 159174 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 cccgcccccgcctccgcctcc 119 ||||||||||||||||||||| Sbjct: 42566 cccgcccccgcctccgcctcc 42586
>dbj|AP007154.1| Aspergillus oryzae RIB40 genomic DNA, SC001 Length = 2005935 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 99 cccgcccccgcctccgcctcc 119 ||||||||||||||||||||| Sbjct: 843278 cccgcccccgcctccgcctcc 843258
>gb|AC069300.7| Oryza sativa chromosome 10 BAC OSJNBa0010C11 genomic sequence, complete sequence Length = 147117 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 93 tcccctcccgcccccgcctccgcct 117 ||||||| ||||||||||||||||| Sbjct: 63182 tcccctcgcgcccccgcctccgcct 63206
>gb|CP000254.1| Methanospirillum hungatei JF-1, complete genome Length = 3544738 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 298 agcaaatgtcggcgccctctc 318 ||||||||||||||||||||| Sbjct: 2651135 agcaaatgtcggcgccctctc 2651115
>emb|BX088600.12| Zebrafish DNA sequence from clone DKEY-166M7 in linkage group 16, complete sequence Length = 192992 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 cccgcccccgcctccgcctcc 119 ||||||||||||||||||||| Sbjct: 114524 cccgcccccgcctccgcctcc 114544
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 91 cctcccctcccgcccccgcctccgcctcc 119 ||||||| ||||||||||||||| ||||| Sbjct: 18463155 cctccccgcccgcccccgcctccccctcc 18463183 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 91 cctcccctcccgcccccgcctccgcctcc 119 ||||||||||| ||||| ||||||||||| Sbjct: 11921741 cctcccctccctcccccacctccgcctcc 11921769 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 ccacgcctcccctcccgccc 105 |||||||||||||||||||| Sbjct: 21010182 ccacgcctcccctcccgccc 21010201
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 ccacgcctcccctcccgcccc 106 ||||||||||||||||||||| Sbjct: 12960700 ccacgcctcccctcccgcccc 12960720 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 86 ccacgcctcccctcccgcccc 106 ||||||||||||||||||||| Sbjct: 5969081 ccacgcctcccctcccgcccc 5969061
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 93 tcccctcccgcccccgcctccgcct 117 ||||||| ||||||||||||||||| Sbjct: 21388169 tcccctcgcgcccccgcctccgcct 21388193 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 cccgcccccgcctccgcctcc 119 ||||||||||||||||||||| Sbjct: 19184883 cccgcccccgcctccgcctcc 19184903 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 cctcccgcccccgcctccgc 115 |||||||||||||||||||| Sbjct: 17845326 cctcccgcccccgcctccgc 17845345
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 96 cctcccgcccccgcctccgcctcca 120 |||||||||||||||| |||||||| Sbjct: 15747516 cctcccgcccccgccttcgcctcca 15747540 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 cacgcctcccctcccgcccc 106 |||||||||||||||||||| Sbjct: 18905402 cacgcctcccctcccgcccc 18905421 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 ccacgcctcccctcccgccc 105 |||||||||||||||||||| Sbjct: 11004430 ccacgcctcccctcccgccc 11004411
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 174 gatgacgccctcgcctccctc 194 ||||||||||||||||||||| Sbjct: 25740124 gatgacgccctcgcctccctc 25740144 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 100 ccgcccccgcctccgcctcca 120 ||||||||||||||||||||| Sbjct: 7945178 ccgcccccgcctccgcctcca 7945198 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 ccacgcctcccctcccgccc 105 |||||||||||||||||||| Sbjct: 12873256 ccacgcctcccctcccgccc 12873275
>gb|AC007207.22| Homo sapiens 12 BAC RP11-320N7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 191877 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 251 tcaggatctagagaaggaggt 271 ||||||||||||||||||||| Sbjct: 184693 tcaggatctagagaaggaggt 184673
>dbj|AP005518.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0046H10 Length = 155544 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 100 ccgcccccgcctccgcctcca 120 ||||||||||||||||||||| Sbjct: 52696 ccgcccccgcctccgcctcca 52716
>dbj|AP003523.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0416A11 Length = 171519 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 174 gatgacgccctcgcctccctc 194 ||||||||||||||||||||| Sbjct: 22328 gatgacgccctcgcctccctc 22348
>dbj|AP005747.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0039E17 Length = 144126 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 96 cctcccgcccccgcctccgcctcca 120 |||||||||||||||| |||||||| Sbjct: 32702 cctcccgcccccgccttcgcctcca 32726
>dbj|AP005686.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0016E03 Length = 152934 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 96 cctcccgcccccgcctccgcctcca 120 |||||||||||||||| |||||||| Sbjct: 138823 cctcccgcccccgccttcgcctcca 138847
>emb|BX088595.7| Zebrafish DNA sequence from clone DKEY-218B7 in linkage group 6, complete sequence Length = 143341 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 cccgcccccgcctccgcctcc 119 ||||||||||||||||||||| Sbjct: 135893 cccgcccccgcctccgcctcc 135913
>emb|BX005291.6| Zebrafish DNA sequence from clone CH211-186F16 in linkage group 14, complete sequence Length = 122803 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 cccgcccccgcctccgcctcc 119 ||||||||||||||||||||| Sbjct: 22255 cccgcccccgcctccgcctcc 22275
>dbj|AP003875.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1119_C05 Length = 126112 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 ccacgcctcccctcccgcccc 106 ||||||||||||||||||||| Sbjct: 44507 ccacgcctcccctcccgcccc 44527
>dbj|AP004560.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0462E11 Length = 166115 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 86 ccacgcctcccctcccgcccc 106 ||||||||||||||||||||| Sbjct: 60826 ccacgcctcccctcccgcccc 60806
>dbj|AP004565.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0486F07 Length = 154926 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 ccacgcctcccctcccgcccc 106 ||||||||||||||||||||| Sbjct: 137131 ccacgcctcccctcccgcccc 137151
>dbj|AK110612.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-168-H05, full insert sequence Length = 1246 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 95 ccctcccgcccccgcctccgcctcc 119 |||||||||| |||||||||||||| Sbjct: 216 ccctcccgcctccgcctccgcctcc 240
>dbj|AK109611.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-137-G05, full insert sequence Length = 1562 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 91 cctcccctcccgcccccgcctccgcctcc 119 ||||||| ||||||||||||||| ||||| Sbjct: 220 cctccccgcccgcccccgcctccccctcc 248
>dbj|AK070507.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023054C04, full insert sequence Length = 1260 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 100 ccgcccccgcctccgcctcca 120 ||||||||||||||||||||| Sbjct: 379 ccgcccccgcctccgcctcca 399
>emb|BX927258.8| Zebrafish DNA sequence from clone CH211-279M15 in linkage group 20, complete sequence Length = 146407 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 99 cccgcccccgcctccgcctcc 119 ||||||||||||||||||||| Sbjct: 146252 cccgcccccgcctccgcctcc 146232
>emb|BX649594.7| Zebrafish DNA sequence from clone CH211-194N6 in linkage group 18, complete sequence Length = 195263 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 cccgcccccgcctccgcctcc 119 ||||||||||||||||||||| Sbjct: 155525 cccgcccccgcctccgcctcc 155545
>emb|BX294662.13| Zebrafish DNA sequence from clone DKEYP-117E6 in linkage group 20, complete sequence Length = 154558 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 cccgcccccgcctccgcctcc 119 ||||||||||||||||||||| Sbjct: 132606 cccgcccccgcctccgcctcc 132626
>gb|AC024558.21| Homo sapiens 3 BAC RP11-390G14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 216161 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 99 cccgcccccgcctccgcctcc 119 ||||||||||||||||||||| Sbjct: 36718 cccgcccccgcctccgcctcc 36698
>emb|CR383669.17| Zebrafish DNA sequence from clone DKEY-25O1 in linkage group 24, complete sequence Length = 185252 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 cccgcccccgcctccgcctcc 119 ||||||||||||||||||||| Sbjct: 162028 cccgcccccgcctccgcctcc 162048
>emb|CT485668.1| Leptosphaeria maculans : genomic region surrounding the avirulence gene AvrLm1 (AM084345) Length = 100390 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 99 cccgcccccgcctccgcctcc 119 ||||||||||||||||||||| Sbjct: 43444 cccgcccccgcctccgcctcc 43424
>emb|CR848789.11| Zebrafish DNA sequence from clone DKEYP-114B4 in linkage group 16, complete sequence Length = 195410 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 99 cccgcccccgcctccgcctcc 119 ||||||||||||||||||||| Sbjct: 189297 cccgcccccgcctccgcctcc 189277
>emb|BX005067.6| Zebrafish DNA sequence from clone CH211-182K2 in linkage group 24, complete sequence Length = 162692 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 cccgcccccgcctccgcctcc 119 ||||||||||||||||||||| Sbjct: 110550 cccgcccccgcctccgcctcc 110570
>emb|CR933737.7| Zebrafish DNA sequence from clone DKEY-35B9 in linkage group 11, complete sequence Length = 76356 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 cccgcccccgcctccgcctcc 119 ||||||||||||||||||||| Sbjct: 65284 cccgcccccgcctccgcctcc 65304
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 93 tcccctcccgcccccgcctccgcct 117 ||||||| ||||||||||||||||| Sbjct: 21399432 tcccctcgcgcccccgcctccgcct 21399456 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 cccgcccccgcctccgcctcc 119 ||||||||||||||||||||| Sbjct: 19196159 cccgcccccgcctccgcctcc 19196179 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 cctcccgcccccgcctccgc 115 |||||||||||||||||||| Sbjct: 17854579 cctcccgcccccgcctccgc 17854598
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 ccacgcctcccctcccgcccc 106 ||||||||||||||||||||| Sbjct: 12914974 ccacgcctcccctcccgcccc 12914994 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 86 ccacgcctcccctcccgcccc 106 ||||||||||||||||||||| Sbjct: 5969074 ccacgcctcccctcccgcccc 5969054
>emb|AL844514.12| Zebrafish DNA sequence from clone DKEY-7E20 in linkage group 1, complete sequence Length = 228327 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 cccgcccccgcctccgcctcc 119 ||||||||||||||||||||| Sbjct: 70977 cccgcccccgcctccgcctcc 70997
>emb|AL731883.4|CNS08C8N Oryza sativa chromosome 12, . BAC OSJNBa0024B03 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 148110 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 86 ccacgcctcccctcccgcccc 106 ||||||||||||||||||||| Sbjct: 107270 ccacgcctcccctcccgcccc 107250
>emb|AL732382.5|CNS08C95 Oryza sativa chromosome 12, . BAC OJ1126_C09 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104737 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 ccacgcctcccctcccgcccc 106 ||||||||||||||||||||| Sbjct: 73953 ccacgcctcccctcccgcccc 73973
>emb|AL713952.3|CNS07YPX Oryza sativa chromosome 12, . BAC OJ1618_C05 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 169662 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 86 ccacgcctcccctcccgcccc 106 ||||||||||||||||||||| Sbjct: 164726 ccacgcctcccctcccgcccc 164706
>ref|XM_493771.2| Oryza sativa (japonica cultivar-group), mRNA Length = 2096 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 cccgcccccgcctccgcctc 118 |||||||||||||||||||| Sbjct: 323 cccgcccccgcctccgcctc 304
>ref|XM_482680.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3033 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 ccgcccccgcctccgcctcc 119 |||||||||||||||||||| Sbjct: 59 ccgcccccgcctccgcctcc 78
>ref|NM_197077.1| Oryza sativa (japonica cultivar-group) putative RNA helicase (OSJNBa0029C15.23), mRNA Length = 4377 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 cctcccgcccccgcctccgc 115 |||||||||||||||||||| Sbjct: 24 cctcccgcccccgcctccgc 43
>ref|NM_183995.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2253 Score = 40.1 bits (20), Expect = 4.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 89 cgcctcccctcccgcccccgcctccgcc 116 ||||||||||||||||||| || ||||| Sbjct: 213 cgcctcccctcccgccccctccgccgcc 186
>gb|AY094541.1| Manduca sexta cadherin mRNA, complete cds Length = 5272 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 tcggcggtggcaattcagga 256 |||||||||||||||||||| Sbjct: 3137 tcggcggtggcaattcagga 3118
>ref|XM_959141.1| Neurospora crassa OR74A hypothetical protein (NCU01950.1) partial mRNA Length = 1251 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 gcgaggccaagcggaggaag 299 |||||||||||||||||||| Sbjct: 920 gcgaggccaagcggaggaag 939
>ref|XM_329139.1| Neurospora crassa OR74A hypothetical protein (NCU01950.1) partial mRNA Length = 1251 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 gcgaggccaagcggaggaag 299 |||||||||||||||||||| Sbjct: 920 gcgaggccaagcggaggaag 939
>gb|AC134576.3| Mus musculus BAC clone RP24-68G10 from chromosome 18, complete sequence Length = 249301 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 cccgcccccgcctccgcctc 118 |||||||||||||||||||| Sbjct: 144246 cccgcccccgcctccgcctc 144265
>ref|XM_653767.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN1255.2), mRNA Length = 4554 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 gtcggcgccctctcgcctca 324 |||||||||||||||||||| Sbjct: 473 gtcggcgccctctcgcctca 492
>gb|BT013004.1| Lycopersicon esculentum clone 114229R, mRNA sequence Length = 2227 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 ttcaggatctagagaaggag 269 |||||||||||||||||||| Sbjct: 945 ttcaggatctagagaaggag 964
>gb|AC151969.3| Mus musculus BAC clone RP24-255B1 from chromosome 9, complete sequence Length = 192458 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 265 aggaggttcaggagtgcgaggcca 288 ||||||||||||||| |||||||| Sbjct: 141879 aggaggttcaggagttcgaggcca 141856
>gb|AF244734.2| Solanum herculeum internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence Length = 610 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 cgcctcccctcccgcccccg 108 |||||||||||||||||||| Sbjct: 87 cgcctcccctcccgcccccg 106
>gb|AC123526.2| Oryza sativa japonica cultivar-group chromosome 11 clone OSJNBa0059J06, complete sequence Length = 185449 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 93 tcccctcccgcccccgcctccgcc 116 |||||||||||| ||||||||||| Sbjct: 72316 tcccctcccgccgccgcctccgcc 72293
>gb|AC134459.4| Mus musculus BAC clone RP23-360L15 from chromosome 8, complete sequence Length = 211773 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 cccctcccgcccccgcctcc 113 |||||||||||||||||||| Sbjct: 194044 cccctcccgcccccgcctcc 194063
>gb|AC115073.9| Mus musculus chromosome 8, clone RP24-417J18, complete sequence Length = 161625 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 cccctcccgcccccgcctcc 113 |||||||||||||||||||| Sbjct: 53720 cccctcccgcccccgcctcc 53739
>gb|AY230397.1| Triticum aestivum clone 1Nb-H10 FCA protein (Fca) mRNA, partial cds Length = 2234 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 96 cctcccgcccccgcctccgcctcc 119 ||||||||| |||||||||||||| Sbjct: 178 cctcccgcctccgcctccgcctcc 155
>gb|AY230385.1| Triticum aestivum clone 1Nb-C11 FCA protein (Fca) mRNA, partial cds Length = 2167 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 96 cctcccgcccccgcctccgcctcc 119 ||||||||| |||||||||||||| Sbjct: 156 cctcccgcctccgcctccgcctcc 133
>gb|AY230323.1| Triticum aestivum mutant FCA-D1 (Fca) gene, complete cds Length = 10360 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 96 cctcccgcccccgcctccgcctcc 119 ||||||||| |||||||||||||| Sbjct: 762 cctcccgcctccgcctccgcctcc 739
>gb|AC095326.9| Rattus norvegicus 1 BAC CH230-89E14 (Children's Hospital Oakland Research Institute) complete sequence Length = 219914 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 cccgcccccgcctccgcctc 118 |||||||||||||||||||| Sbjct: 97418 cccgcccccgcctccgcctc 97399
>ref|XM_745264.1| Aspergillus fumigatus Af293 hypothetical protein (Afu1g06080) partial mRNA Length = 3264 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 ccgcccccgcctccgcctcc 119 |||||||||||||||||||| Sbjct: 2743 ccgcccccgcctccgcctcc 2724
>ref|XM_750883.1| Aspergillus fumigatus Af293 translation initiation factor 4B (Afu2g16400) partial mRNA Length = 1440 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 89 cgcctcccctcccgcccccgcctc 112 |||||||||| ||||||||||||| Sbjct: 858 cgcctcccctgccgcccccgcctc 881
>ref|XM_535406.2| PREDICTED: Canis familiaris similar to F-box only protein 2 (LOC478231), mRNA Length = 1826 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 ccgcccccgcctccgcctcc 119 |||||||||||||||||||| Sbjct: 760 ccgcccccgcctccgcctcc 741
>ref|XM_784623.1| PREDICTED: Strongylocentrotus purpuratus similar to CG10327-PA, isoform A (LOC584774), mRNA Length = 1545 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 ccgcccccgcctccgcctcc 119 |||||||||||||||||||| Sbjct: 1163 ccgcccccgcctccgcctcc 1144
>emb|AL353794.10| Human DNA sequence from clone RP11-466A17 on chromosome 9 Contains part of the GNA14 gene for guanine nucleotide binding protein (G protein) alpha 14 and the 3' end of a novel gene, complete sequence Length = 70356 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 96 cctcccgcccccgcctccgcctcc 119 ||||||||| |||||||||||||| Sbjct: 38231 cctcccgcctccgcctccgcctcc 38208
>gb|AC133978.2| Rattus norvegicus 2 BAC CH230-10K1 (Children's Hospital Oakland Research Institute) complete sequence Length = 213704 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 265 aggaggttcaggagtgcgaggcca 288 ||||||||||||||||| |||||| Sbjct: 93501 aggaggttcaggagtgcaaggcca 93524
>gb|AC084026.14| Homo sapiens chromosome 8, clone RP11-486M23, complete sequence Length = 185759 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 96 cctcccgcccccgcctccgcctcc 119 ||||||||| |||||||||||||| Sbjct: 89544 cctcccgcctccgcctccgcctcc 89567
>gb|AF319973.1| Manduca sexta cadherin-related protein receptor BT-R1 mRNA, complete cds Length = 5582 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 tcggcggtggcaattcagga 256 |||||||||||||||||||| Sbjct: 3221 tcggcggtggcaattcagga 3202
>dbj|AB206815.1| Hordeum vulgare IDI4 mRNA for putative asparate aminotransferase, complete cds Length = 1401 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 ccgcccccgcctccgcctcc 119 |||||||||||||||||||| Sbjct: 24 ccgcccccgcctccgcctcc 43
>gb|AC091776.19| Chlamydomonas reinhardtii clone cr-4i21, complete sequence Length = 48498 Score = 40.1 bits (20), Expect = 4.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 89 cgcctcccctcccgcccccgcctccgcctcca 120 ||||||| | |||||||||||| ||||||||| Sbjct: 11715 cgcctccgcccccgcccccgcccccgcctcca 11746
>gb|AC087726.36| Chlamydomonas reinhardtii clone cr-40a20, complete sequence Length = 168794 Score = 40.1 bits (20), Expect = 4.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 89 cgcctcccctcccgcccccgcctccgcctcca 120 ||||||| | |||||||||||| ||||||||| Sbjct: 159229 cgcctccgcccccgcccccgcccccgcctcca 159260
>gb|DQ387872.1| Neurospora crassa strain Adiopodoume-1 Srp interval sequence Length = 33499 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 gcgaggccaagcggaggaag 299 |||||||||||||||||||| Sbjct: 27046 gcgaggccaagcggaggaag 27027
>gb|AC087182.12| Oryza sativa chromosome 10 BAC OSJNBa0029C15 genomic sequence, complete sequence Length = 148816 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 cctcccgcccccgcctccgc 115 |||||||||||||||||||| Sbjct: 86715 cctcccgcccccgcctccgc 86696
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 93 tcccctcccgcccccgcctccgcc 116 |||||||||||| ||||||||||| Sbjct: 2000761 tcccctcccgccgccgcctccgcc 2000738
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 4.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 89 cgcctcccctcccgcccccgcctccgcctcca 120 ||||||||||| |||| ||| ||||||||||| Sbjct: 13476915 cgcctcccctcacgccgccgtctccgcctcca 13476884
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 4.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 89 cgcctcccctcccgcccccgcctccgcc 116 ||||||||||||||||||| || ||||| Sbjct: 13787292 cgcctcccctcccgccccctccgccgcc 13787319 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 cccgcccccgcctccgcctc 118 |||||||||||||||||||| Sbjct: 3138896 cccgcccccgcctccgcctc 3138915
>gb|AF204951.2|AF204951 Ectocarpus siliculosus virus, complete genome Length = 335593 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 ccgcccccgcctccgcctcc 119 |||||||||||||||||||| Sbjct: 173809 ccgcccccgcctccgcctcc 173790 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 ccgcccccgcctccgcctcc 119 |||||||||||||||||||| Sbjct: 173785 ccgcccccgcctccgcctcc 173766
>dbj|AB015202.2| Homo sapiens gene for hippocalcin, complete cds Length = 6143 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 84 ctccacgcctcccctcccgccccc 107 |||| ||||||||||||||||||| Sbjct: 3916 ctccccgcctcccctcccgccccc 3939
>gb|AC009961.11| Homo sapiens BAC clone RP11-357L2 from 2, complete sequence Length = 216571 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 90 gcctcccctcccgcccccgcctcc 113 ||||||| |||||||||||||||| Sbjct: 101171 gcctcccttcccgcccccgcctcc 101148
>gb|AC013726.7| Homo sapiens BAC clone RP11-400N9 from 2, complete sequence Length = 214647 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 96 cctcccgcccccgcctccgcctcc 119 ||||||||| |||||||||||||| Sbjct: 154128 cctcccgcctccgcctccgcctcc 154151
>dbj|AP003205.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1146B04 Length = 145186 Score = 40.1 bits (20), Expect = 4.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 89 cgcctcccctcccgcccccgcctccgcc 116 ||||||||||||||||||| || ||||| Sbjct: 125620 cgcctcccctcccgccccctccgccgcc 125647
>gb|AC090882.10| Oryza sativa chromosome 3 BAC OSJNBa0014G15 genomic sequence, complete sequence Length = 158839 Score = 40.1 bits (20), Expect = 4.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 92 ctcccctcccgcccccgcctccgcctcc 119 ||||||||| ||||||||||||||||| Sbjct: 34757 ctcccctccttcccccgcctccgcctcc 34730
>gb|AC026329.14| Homo sapiens 3 BAC RP11-325J6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 117404 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 tgacctacctcacccagggc 149 |||||||||||||||||||| Sbjct: 91655 tgacctacctcacccagggc 91674
>gb|AC114493.3| Homo sapiens chromosome 1 clone RP11-336O20, complete sequence Length = 179221 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 84 ctccacgcctcccctcccgccccc 107 |||| ||||||||||||||||||| Sbjct: 128518 ctccccgcctcccctcccgccccc 128541
>dbj|AP005552.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1116_C03 Length = 112383 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 ccacgcctcccctcccgccc 105 |||||||||||||||||||| Sbjct: 30237 ccacgcctcccctcccgccc 30218
>dbj|AP002521.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0041E11 Length = 146335 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 cccgcccccgcctccgcctc 118 |||||||||||||||||||| Sbjct: 82684 cccgcccccgcctccgcctc 82703
>dbj|AP003852.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0440D10 Length = 144340 Score = 40.1 bits (20), Expect = 4.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 89 cgcctcccctcccgcccccgcctccgcc 116 ||||||||||||||||||| || ||||| Sbjct: 24695 cgcctcccctcccgccccctccgccgcc 24722
>dbj|AP004325.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1230_H04 Length = 123818 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 ccacgcctcccctcccgccc 105 |||||||||||||||||||| Sbjct: 45743 ccacgcctcccctcccgccc 45762
>dbj|AP005831.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1123E10 Length = 134641 Score = 40.1 bits (20), Expect = 4.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 89 cgcctcccctcccgcccccgcctccgcctcca 120 ||||||||||| |||| ||| ||||||||||| Sbjct: 56598 cgcctcccctcacgccgccgtctccgcctcca 56567
>dbj|AP004665.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0429B05 Length = 155024 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 ccgcccccgcctccgcctcc 119 |||||||||||||||||||| Sbjct: 128395 ccgcccccgcctccgcctcc 128376
>dbj|AP004558.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0409A07 Length = 146663 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 ccgcccccgcctccgcctcc 119 |||||||||||||||||||| Sbjct: 49481 ccgcccccgcctccgcctcc 49462
>dbj|AK101398.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033037C08, full insert sequence Length = 2644 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 ccgcccccgcctccgcctcc 119 |||||||||||||||||||| Sbjct: 89 ccgcccccgcctccgcctcc 108
>dbj|AK100716.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023115O05, full insert sequence Length = 2688 Score = 40.1 bits (20), Expect = 4.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 89 cgcctcccctcccgcccccgcctccgcc 116 ||||||||||||||||||| || ||||| Sbjct: 353 cgcctcccctcccgccccctccgccgcc 326
>emb|AL163302.2|HS21C102 Homo sapiens chromosome 21 segment HS21C102 Length = 340000 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 cccgcccccgcctccgcctc 118 |||||||||||||||||||| Sbjct: 289069 cccgcccccgcctccgcctc 289050
>dbj|AK069905.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023034H21, full insert sequence Length = 2096 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 cccgcccccgcctccgcctc 118 |||||||||||||||||||| Sbjct: 323 cccgcccccgcctccgcctc 304
>dbj|AK068103.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013129K12, full insert sequence Length = 2482 Score = 40.1 bits (20), Expect = 4.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 89 cgcctcccctcccgcccccgcctccgcctcca 120 ||||||||||| |||| ||| ||||||||||| Sbjct: 177 cgcctcccctcacgccgccgtctccgcctcca 208
>gb|AY108912.1| Zea mays PCO084799 mRNA sequence Length = 690 Score = 40.1 bits (20), Expect = 4.3 Identities = 28/31 (90%) Strand = Plus / Plus Query: 89 cgcctcccctcccgcccccgcctccgcctcc 119 |||||| |||| |||||||||| |||||||| Sbjct: 45 cgcctcgcctcncgcccccgcccccgcctcc 75
>gb|DQ208406.1| Oryza sativa (indica cultivar-group) dicer-like protein mRNA, complete cds Length = 5194 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 cctcccgcccccgcctccgc 115 |||||||||||||||||||| Sbjct: 24 cctcccgcccccgcctccgc 43
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 93 tcccctcccgcccccgcctccgcc 116 |||||||||||| ||||||||||| Sbjct: 2008542 tcccctcccgccgccgcctccgcc 2008519
>emb|AL731590.4|OSJN00233 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0035I04, complete sequence Length = 140890 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 ccacgcctcccctcccgccc 105 |||||||||||||||||||| Sbjct: 75158 ccacgcctcccctcccgccc 75139
>emb|AL133493.3|HS53I10 Homo sapiens chromosome 21sequence from BAC GS1-53I10, complete sequence Length = 223201 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 cccgcccccgcctccgcctc 118 |||||||||||||||||||| Sbjct: 88758 cccgcccccgcctccgcctc 88739
>gb|AC151580.2| Mus musculus BAC clone RP23-65L6 from 18, complete sequence Length = 236806 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 cccgcccccgcctccgcctc 118 |||||||||||||||||||| Sbjct: 33121 cccgcccccgcctccgcctc 33140
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 ccgcccccgcctccgcctcc 119 |||||||||||||||||||| Sbjct: 2687209 ccgcccccgcctccgcctcc 2687228
>gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0453H11, complete sequence Length = 187956 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 ccacgcctcccctcccgccc 105 |||||||||||||||||||| Sbjct: 169846 ccacgcctcccctcccgccc 169865
>gb|U05204.1|OCU05204 Oryctolagus cuniculus preproacrosin mRNA, complete cds Length = 1396 Score = 40.1 bits (20), Expect = 4.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 89 cgcctcccctcccgcccccgcctccgcc 116 ||||||| | |||||||||||||||||| Sbjct: 1073 cgcctccgcccccgcccccgcctccgcc 1100
>emb|AL137791.19| Human DNA sequence from clone RP5-1079D1 on chromosome 1p32.2-33, complete sequence Length = 66254 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 84 ctccacgcctcccctcccgccccc 107 |||| ||||||||||||||||||| Sbjct: 53606 ctccccgcctcccctcccgccccc 53629
>dbj|AP002539.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0433F09 Length = 150150 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 cccgcccccgcctccgcctc 118 |||||||||||||||||||| Sbjct: 106936 cccgcccccgcctccgcctc 106955 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,549,213 Number of Sequences: 3902068 Number of extensions: 2549213 Number of successful extensions: 66491 Number of sequences better than 10.0: 173 Number of HSP's better than 10.0 without gapping: 188 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 64079 Number of HSP's gapped (non-prelim): 2311 length of query: 327 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 305 effective length of database: 17,147,199,772 effective search space: 5229895930460 effective search space used: 5229895930460 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
