ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal16h01 |
|---|---|
| Clone Library Name | barley_pub |
>CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCI type III CAB-8) Length = 273 Score = 127 bits (320), Expect = 5e-30 Identities = 57/67 (85%), Positives = 62/67 (92%) Frame = +1 Query: 145 FVVRASSSPPAKQNDNRQLWFASKQSLTYLDGTLPGDFGFDPLGLSDPEGTGGFIEPRWL 324 FVVRA+S+PP KQ NRQLWFASKQSL+YLDG LPGDFGFDPLGLSDPEGTGGFIEP+WL Sbjct: 37 FVVRAASTPPVKQGANRQLWFASKQSLSYLDGRLPGDFGFDPLGLSDPEGTGGFIEPKWL 96 Query: 325 AYGEIFN 345 AYGE+ N Sbjct: 97 AYGEVIN 103
>CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast precursor| (LHCI type II CAB) Length = 270 Score = 50.1 bits (118), Expect = 1e-06 Identities = 26/54 (48%), Positives = 30/54 (55%), Gaps = 6/54 (11%) Frame = +1 Query: 190 NRQLWFASKQSLTYLDGTLPGDFGFDPLGL-SDPE-----GTGGFIEPRWLAYG 333 +R LWF +LDG+LPGDFGFDPLGL SDPE + RW G Sbjct: 64 DRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPESLKWNAQAELVHSRWAMLG 117
>CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCI type II CAB-7) Length = 270 Score = 50.1 bits (118), Expect = 1e-06 Identities = 24/47 (51%), Positives = 32/47 (68%), Gaps = 1/47 (2%) Frame = +1 Query: 154 RASSSPPAKQNDNRQLWFASKQSLTYLDGTLPGDFGFDPLGL-SDPE 291 R++++ + +R LWF +LDG+LPGDFGFDPLGL SDPE Sbjct: 52 RSATTVCVAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPE 98
>CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chloroplast| precursor (LHCII protein 4.2) (LHCB4.2) Length = 287 Score = 45.8 bits (107), Expect = 3e-05 Identities = 19/33 (57%), Positives = 23/33 (69%) Frame = +1 Query: 190 NRQLWFASKQSLTYLDGTLPGDFGFDPLGLSDP 288 +R LWF +S YLDG+L GD+GFDP GL P Sbjct: 51 DRPLWFPGAKSPEYLDGSLVGDYGFDPFGLGKP 83
>CB29_CHLRE (Q93WD2) Chlorophyll a-b binding protein CP29| Length = 279 Score = 41.6 bits (96), Expect = 5e-04 Identities = 18/30 (60%), Positives = 21/30 (70%) Frame = +1 Query: 199 LWFASKQSLTYLDGTLPGDFGFDPLGLSDP 288 LW + +LDG+LPGD GFDPLGLS P Sbjct: 51 LWLPNTTRPEWLDGSLPGDRGFDPLGLSKP 80
>CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chloroplast| precursor (LHCII protein 4.1) (LHCB4.1) Length = 290 Score = 41.2 bits (95), Expect = 6e-04 Identities = 17/33 (51%), Positives = 22/33 (66%) Frame = +1 Query: 190 NRQLWFASKQSLTYLDGTLPGDFGFDPLGLSDP 288 +R LW+ S +LDG+L GD+GFDP GL P Sbjct: 54 DRPLWYPGAISPDWLDGSLVGDYGFDPFGLGKP 86
>CB4B_LYCES (P27525) Chlorophyll a-b binding protein CP24 10B, chloroplast| precursor (CAB-10B) (LHCP) Length = 256 Score = 39.7 bits (91), Expect = 0.002 Identities = 25/55 (45%), Positives = 31/55 (56%), Gaps = 7/55 (12%) Frame = +1 Query: 145 FVVRASSSPPAKQNDNRQLWFASKQS------LTYLDGTLPGDFGFDPLGL-SDP 288 FVV A++ P K W + +S +LDG+LPGDFGFDPLGL DP Sbjct: 42 FVVAAAAVAPKKS------WIPAVKSGGNLVDPEWLDGSLPGDFGFDPLGLGKDP 90
>CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCI type III CAB-4) (LHCP) Length = 251 Score = 39.3 bits (90), Expect = 0.002 Identities = 22/50 (44%), Positives = 26/50 (52%), Gaps = 6/50 (12%) Frame = +1 Query: 202 WFASKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEP-----RWLAYG 333 W S YL G+L GD GFDPLGL+ DPE F++ RW G Sbjct: 57 WLPGLASPDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLG 106
>CB4_SPIOL (P36494) Chlorophyll a-b binding protein CP24, chloroplast| precursor Length = 261 Score = 38.5 bits (88), Expect = 0.004 Identities = 17/21 (80%), Positives = 19/21 (90%), Gaps = 1/21 (4%) Frame = +1 Query: 229 YLDGTLPGDFGFDPLGL-SDP 288 +LDG+LPGDFGFDPLGL DP Sbjct: 75 WLDGSLPGDFGFDPLGLGKDP 95
>CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloroplast precursor| (LHCI type I CAB-6A) (Light-harvesting complex I 26 kDa protein) Length = 246 Score = 38.5 bits (88), Expect = 0.004 Identities = 15/28 (53%), Positives = 19/28 (67%) Frame = +1 Query: 202 WFASKQSLTYLDGTLPGDFGFDPLGLSD 285 W + +YLDG+ PGDFGFD LGL + Sbjct: 49 WMPGQPRPSYLDGSAPGDFGFDSLGLGE 76
>CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chloroplast| precursor (LHCII protein 4.3) (LHCB4.3) Length = 276 Score = 38.1 bits (87), Expect = 0.005 Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 5/53 (9%) Frame = +1 Query: 145 FVVRASSSPPAK----QND-NRQLWFASKQSLTYLDGTLPGDFGFDPLGLSDP 288 F + + PP K Q+D +R +WF +LDG++ GD GFDP GL P Sbjct: 35 FGKKKPAPPPKKSRQVQDDGDRLVWFPGANPPEWLDGSMIGDRGFDPFGLGKP 87
>CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, chloroplast| precursor (CAB-10A) (LHCP) Length = 256 Score = 37.4 bits (85), Expect = 0.009 Identities = 16/21 (76%), Positives = 19/21 (90%), Gaps = 1/21 (4%) Frame = +1 Query: 229 YLDGTLPGDFGFDPLGL-SDP 288 +LDG+LPGD+GFDPLGL DP Sbjct: 70 WLDGSLPGDYGFDPLGLGKDP 90
>CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloroplast precursor| (LHCII type I CAB-C) (LHCP) Length = 267 Score = 36.6 bits (83), Expect = 0.016 Identities = 22/46 (47%), Positives = 28/46 (60%), Gaps = 1/46 (2%) Frame = +1 Query: 157 ASSSPPAKQNDNRQLWFASKQSLTYLDGTLPGDFGFDPLGLS-DPE 291 +SSSP N + L S +S +YL G PGD+G+D GLS DPE Sbjct: 46 SSSSPWYGPNRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPE 91
>CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII type I| CAB-AB96) (LHCP) (Major 15) (Fragment) Length = 228 Score = 36.2 bits (82), Expect = 0.021 Identities = 22/48 (45%), Positives = 29/48 (60%), Gaps = 1/48 (2%) Frame = +1 Query: 151 VRASSSPPAKQNDNRQLWFASKQSLTYLDGTLPGDFGFDPLGLS-DPE 291 V +SSSP + + L S +S +YL G PGD+G+D GLS DPE Sbjct: 5 VASSSSPWHGPDGVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPE 52
>CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloroplast precursor| (LHCII type I CAB-21) (LHCP) Length = 265 Score = 35.8 bits (81), Expect = 0.027 Identities = 22/46 (47%), Positives = 28/46 (60%), Gaps = 1/46 (2%) Frame = +1 Query: 157 ASSSPPAKQNDNRQLWFASKQSLTYLDGTLPGDFGFDPLGLS-DPE 291 ASSSP + + L S +S +YL G PGD+G+D GLS DPE Sbjct: 44 ASSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPE 89
>CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII type III,| chloroplast precursor (CAB) Length = 268 Score = 34.7 bits (78), Expect = 0.060 Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 6/49 (12%) Frame = +1 Query: 211 SKQSLTYLDGTLPGDFGFDPLGLS-DPEGTG-----GFIEPRWLAYGEI 339 S Q+ +YL+G PGD+G+D GLS DPE I RW G + Sbjct: 63 SAQTPSYLNGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGAL 111
>CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type III CAB-13) Length = 265 Score = 34.7 bits (78), Expect = 0.060 Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 6/49 (12%) Frame = +1 Query: 211 SKQSLTYLDGTLPGDFGFDPLGLS-DPEGTG-----GFIEPRWLAYGEI 339 S Q+ +YL+G PGD+G+D GLS DPE I RW G + Sbjct: 60 SAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGAL 108
>CB21_SILPR (P12332) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) (Fragment) Length = 205 Score = 34.3 bits (77), Expect = 0.078 Identities = 16/28 (57%), Positives = 21/28 (75%), Gaps = 1/28 (3%) Frame = +1 Query: 211 SKQSLTYLDGTLPGDFGFDPLGLS-DPE 291 S+Q+ +YL G PGD+G+D GLS DPE Sbjct: 61 SEQTPSYLTGEFPGDYGWDTAGLSADPE 88
>CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 263 Score = 34.3 bits (77), Expect = 0.078 Identities = 16/28 (57%), Positives = 21/28 (75%), Gaps = 1/28 (3%) Frame = +1 Query: 211 SKQSLTYLDGTLPGDFGFDPLGLS-DPE 291 S+Q+ +YL G PGD+G+D GLS DPE Sbjct: 60 SEQTPSYLTGEFPGDYGWDTAGLSADPE 87
>CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloroplast precursor| (LHCII type I CAB-5) (LHCP) (Fragment) Length = 237 Score = 34.3 bits (77), Expect = 0.078 Identities = 16/28 (57%), Positives = 21/28 (75%), Gaps = 1/28 (3%) Frame = +1 Query: 211 SKQSLTYLDGTLPGDFGFDPLGLS-DPE 291 S+Q+ +YL G PGD+G+D GLS DPE Sbjct: 34 SEQTPSYLTGEFPGDYGWDTAGLSADPE 61
>CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCII type I CAB-8) Length = 268 Score = 34.3 bits (77), Expect = 0.078 Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 1/48 (2%) Frame = +1 Query: 151 VRASSSPPAKQNDNRQLWFASKQSLTYLDGTLPGDFGFDPLGLS-DPE 291 V +S SP + + L S +S +YL G PGD+G+D GLS DPE Sbjct: 45 VASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPE 92
>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast| precursor (LHCII type I CAB-AB80) (LHCP) Length = 269 Score = 34.3 bits (77), Expect = 0.078 Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 1/48 (2%) Frame = +1 Query: 151 VRASSSPPAKQNDNRQLWFASKQSLTYLDGTLPGDFGFDPLGLS-DPE 291 V +S SP + + L S +S +YL G PGD+G+D GLS DPE Sbjct: 46 VASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPE 93
>CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 264 Score = 34.3 bits (77), Expect = 0.078 Identities = 16/28 (57%), Positives = 21/28 (75%), Gaps = 1/28 (3%) Frame = +1 Query: 211 SKQSLTYLDGTLPGDFGFDPLGLS-DPE 291 S+Q+ +YL G PGD+G+D GLS DPE Sbjct: 61 SEQTPSYLTGEFPGDYGWDTAGLSADPE 88
>CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor| (LHCII type I CAB-1B) (LHCP) Length = 265 Score = 34.3 bits (77), Expect = 0.078 Identities = 21/45 (46%), Positives = 27/45 (60%), Gaps = 1/45 (2%) Frame = +1 Query: 160 SSSPPAKQNDNRQLWFASKQSLTYLDGTLPGDFGFDPLGLS-DPE 291 SSSP + + L S +S +YL G PGD+G+D GLS DPE Sbjct: 45 SSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPE 89
>CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloroplast precursor| (LHCII type I CAB-37) (LHCP) Length = 265 Score = 34.3 bits (77), Expect = 0.078 Identities = 16/28 (57%), Positives = 21/28 (75%), Gaps = 1/28 (3%) Frame = +1 Query: 211 SKQSLTYLDGTLPGDFGFDPLGLS-DPE 291 S+Q+ +YL G PGD+G+D GLS DPE Sbjct: 62 SEQTPSYLTGEFPGDYGWDTAGLSADPE 89
>CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCII type I CAB-4) (LHCP) Length = 265 Score = 34.3 bits (77), Expect = 0.078 Identities = 16/28 (57%), Positives = 21/28 (75%), Gaps = 1/28 (3%) Frame = +1 Query: 211 SKQSLTYLDGTLPGDFGFDPLGLS-DPE 291 S+Q+ +YL G PGD+G+D GLS DPE Sbjct: 62 SEQTPSYLTGEFPGDYGWDTAGLSADPE 89
>CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloroplast precursor| (LHCII type I CAB-36) (LHCP) Length = 265 Score = 34.3 bits (77), Expect = 0.078 Identities = 16/28 (57%), Positives = 21/28 (75%), Gaps = 1/28 (3%) Frame = +1 Query: 211 SKQSLTYLDGTLPGDFGFDPLGLS-DPE 291 S+Q+ +YL G PGD+G+D GLS DPE Sbjct: 62 SEQTPSYLTGEFPGDYGWDTAGLSADPE 89
>CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 member F3,| chloroplast precursor (DE Chlorophyll a-b binding protein type I F3) (CAB-F3) (LHCP) Length = 265 Score = 34.3 bits (77), Expect = 0.078 Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 11/57 (19%) Frame = +1 Query: 154 RASSSPPAKQNDNRQLWFASKQSL----------TYLDGTLPGDFGFDPLGLS-DPE 291 R P + + +W+ S + L +YL G PGD+G+D GLS DPE Sbjct: 33 RVQMMAPKSKAPSGSIWYGSDRPLYLGPFSGSPPSYLSGEFPGDYGWDTAGLSADPE 89
>CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 267 Score = 34.3 bits (77), Expect = 0.078 Identities = 21/45 (46%), Positives = 27/45 (60%), Gaps = 1/45 (2%) Frame = +1 Query: 160 SSSPPAKQNDNRQLWFASKQSLTYLDGTLPGDFGFDPLGLS-DPE 291 SSSP + + L S +S +YL G PGD+G+D GLS DPE Sbjct: 47 SSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPE 91
>LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins precursor| [Contains: LH38 protein 1; LH38 protein 2; LH38 protein 3] (Fragment) Length = 530 Score = 33.9 bits (76), Expect = 0.10 Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 1/35 (2%) Frame = +1 Query: 187 DNRQLWFASKQSLTYLDGTLPGDFGFDPLGL-SDP 288 + R+LWF + YL G GD GFDP GL +DP Sbjct: 369 EERELWFPNIVPPRYLTGEAYGDKGFDPAGLAADP 403 Score = 32.3 bits (72), Expect = 0.30 Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 1/32 (3%) Frame = +1 Query: 199 LWFASKQSLTYLDGTLPGDFGFDPLGL-SDPE 291 LWF + + ++L+G GD GFDP GL +DP+ Sbjct: 4 LWFPNTLAPSWLNGEYYGDRGFDPAGLAADPD 35 Score = 32.0 bits (71), Expect = 0.39 Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 1/32 (3%) Frame = +1 Query: 199 LWFASKQSLTYLDGTLPGDFGFDPLGL-SDPE 291 LWF + + L G P D GFDPL L +DP+ Sbjct: 189 LWFPNAEPPALLTGEYPADRGFDPLNLAADPD 220
>CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 266 Score = 33.9 bits (76), Expect = 0.10 Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 11/50 (22%) Frame = +1 Query: 175 AKQNDNRQLWFASKQSL----------TYLDGTLPGDFGFDPLGLS-DPE 291 AKQ + W+ S + L +YL G PGD+G+D GLS DPE Sbjct: 41 AKQVSSSSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPE 90
>CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 33.9 bits (76), Expect = 0.10 Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 9/59 (15%) Frame = +1 Query: 190 NRQLW---FASKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGF-----IEPRWLAYGEI 339 NR W ++ + YL G PGD+G+D GLS DPE + I RW G + Sbjct: 40 NRAKWLGPYSENATPAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHARWAMLGAL 98
>CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 262 Score = 33.5 bits (75), Expect = 0.13 Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 1/48 (2%) Frame = +1 Query: 151 VRASSSPPAKQNDNRQLWFASKQSLTYLDGTLPGDFGFDPLGLS-DPE 291 V AS SP + + L S + +YL G PGD+G+D GLS DPE Sbjct: 39 VAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPE 86
>CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 264 Score = 33.1 bits (74), Expect = 0.17 Identities = 16/28 (57%), Positives = 20/28 (71%), Gaps = 1/28 (3%) Frame = +1 Query: 211 SKQSLTYLDGTLPGDFGFDPLGLS-DPE 291 S +S +YL G PGD+G+D GLS DPE Sbjct: 61 SGESPSYLTGEFPGDYGWDTAGLSADPE 88
>CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloroplast precursor| (LHCII type I CAB-E) (LHCP) Length = 266 Score = 33.1 bits (74), Expect = 0.17 Identities = 16/28 (57%), Positives = 20/28 (71%), Gaps = 1/28 (3%) Frame = +1 Query: 211 SKQSLTYLDGTLPGDFGFDPLGLS-DPE 291 S +S +YL G PGD+G+D GLS DPE Sbjct: 63 SGESPSYLTGEFPGDYGWDTAGLSADPE 90
>CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloroplast precursor| (LHCII type I CAB-16) (LHCP) Length = 266 Score = 33.1 bits (74), Expect = 0.17 Identities = 16/28 (57%), Positives = 20/28 (71%), Gaps = 1/28 (3%) Frame = +1 Query: 211 SKQSLTYLDGTLPGDFGFDPLGLS-DPE 291 S +S +YL G PGD+G+D GLS DPE Sbjct: 63 SGESPSYLTGEFPGDYGWDTAGLSADPE 90
>CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor| (LHCII type I CAB-3C) (LHCP) Length = 267 Score = 33.1 bits (74), Expect = 0.17 Identities = 16/28 (57%), Positives = 20/28 (71%), Gaps = 1/28 (3%) Frame = +1 Query: 211 SKQSLTYLDGTLPGDFGFDPLGLS-DPE 291 S +S +YL G PGD+G+D GLS DPE Sbjct: 64 SGESPSYLTGEFPGDYGWDTAGLSADPE 91
>CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloroplast precursor| (LHCII type I CAB-50) (LHCP) Length = 267 Score = 33.1 bits (74), Expect = 0.17 Identities = 16/28 (57%), Positives = 20/28 (71%), Gaps = 1/28 (3%) Frame = +1 Query: 211 SKQSLTYLDGTLPGDFGFDPLGLS-DPE 291 S +S +YL G PGD+G+D GLS DPE Sbjct: 64 SGESPSYLTGEFPGDYGWDTAGLSADPE 91
>CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloroplast precursor| (LHCII type I CAB-40) (LHCP) Length = 267 Score = 33.1 bits (74), Expect = 0.17 Identities = 16/28 (57%), Positives = 20/28 (71%), Gaps = 1/28 (3%) Frame = +1 Query: 211 SKQSLTYLDGTLPGDFGFDPLGLS-DPE 291 S +S +YL G PGD+G+D GLS DPE Sbjct: 64 SGESPSYLTGEFPGDYGWDTAGLSADPE 91
>CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloroplast precursor| (LHCII type II CAB-215) (LHCP) Length = 265 Score = 33.1 bits (74), Expect = 0.17 Identities = 16/28 (57%), Positives = 20/28 (71%), Gaps = 1/28 (3%) Frame = +1 Query: 211 SKQSLTYLDGTLPGDFGFDPLGLS-DPE 291 S+Q +YL G PGD+G+D GLS DPE Sbjct: 62 SEQIPSYLTGEFPGDYGWDTAGLSADPE 89
>CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (CAB-140) (LHCP) Length = 267 Score = 33.1 bits (74), Expect = 0.17 Identities = 16/28 (57%), Positives = 20/28 (71%), Gaps = 1/28 (3%) Frame = +1 Query: 211 SKQSLTYLDGTLPGDFGFDPLGLS-DPE 291 S +S +YL G PGD+G+D GLS DPE Sbjct: 63 SGESPSYLTGEFPGDYGWDTAGLSADPE 90
>CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chloroplast| precursor (LHCII type I CAB-165/180) Length = 267 Score = 33.1 bits (74), Expect = 0.17 Identities = 16/28 (57%), Positives = 20/28 (71%), Gaps = 1/28 (3%) Frame = +1 Query: 211 SKQSLTYLDGTLPGDFGFDPLGLS-DPE 291 S +S +YL G PGD+G+D GLS DPE Sbjct: 63 SGESPSYLTGEFPGDYGWDTAGLSADPE 90
>CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 32.7 bits (73), Expect = 0.23 Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 6/51 (11%) Frame = +1 Query: 205 FASKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGF-----IEPRWLAYGEI 339 F+ + YL G PGD+G+D GLS DP+ + I RW G + Sbjct: 45 FSENDTPEYLTGEFPGDYGWDTAGLSADPQTFARYREIELIHARWALLGAL 95
>CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 256 Score = 32.3 bits (72), Expect = 0.30 Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 8/58 (13%) Frame = +1 Query: 190 NRQLWFA--SKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGF-----IEPRWLAYGEI 339 +R W S + YL G PGD+G+D GLS DPE + I RW G + Sbjct: 43 DRAKWLGPFSTNTPAYLTGEFPGDYGWDTAGLSADPETFKKYRELEVIHARWALLGAL 100
>CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chloroplast precursor| (LHCII type II CAB-151) (LHCP) Length = 265 Score = 32.3 bits (72), Expect = 0.30 Identities = 16/28 (57%), Positives = 19/28 (67%), Gaps = 1/28 (3%) Frame = +1 Query: 211 SKQSLTYLDGTLPGDFGFDPLGLS-DPE 291 S Q +YL G PGD+G+D GLS DPE Sbjct: 62 SDQIPSYLTGEFPGDYGWDTAGLSADPE 89
>MOD5_HUMAN (Q9H3H1) tRNA isopentenyltransferase, mitochondrial precursor (EC| 2.5.1.8) (Isopentenyl-diphosphate:tRNA isopentenyltransferase) (IPP transferase) (IPTase) (IPPT) (hGRO1) Length = 467 Score = 32.0 bits (71), Expect = 0.39 Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 1/35 (2%) Frame = -1 Query: 261 AKVTRQRAVEVGEGLLGREPQLPVVILLG-RGAGR 160 A V RAV VG GL G + LP+V++LG G G+ Sbjct: 2 ASVAAARAVPVGSGLRGLQRTLPLVVILGATGTGK 36
>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor| (Allergen Api g 3) Length = 264 Score = 32.0 bits (71), Expect = 0.39 Identities = 15/28 (53%), Positives = 20/28 (71%), Gaps = 1/28 (3%) Frame = +1 Query: 211 SKQSLTYLDGTLPGDFGFDPLGLS-DPE 291 S ++ +YL G PGD+G+D GLS DPE Sbjct: 61 SGEAPSYLTGEFPGDYGWDTAGLSADPE 88
>CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 member 1B,| chloroplast precursor (Chlorophyll a-b binding protein type II 1B) (CAB) (LHCP) Length = 274 Score = 32.0 bits (71), Expect = 0.39 Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 3/48 (6%) Frame = +1 Query: 157 ASSSPPAKQNDNRQLWFA--SKQSLTYLDGTLPGDFGFDPLGLS-DPE 291 AS+S +R L+ S + +YL G PGD+G+D GLS DPE Sbjct: 51 ASASTSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPE 98
>CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCII type I CAB-7) (LHCP) Length = 267 Score = 32.0 bits (71), Expect = 0.39 Identities = 15/28 (53%), Positives = 20/28 (71%), Gaps = 1/28 (3%) Frame = +1 Query: 211 SKQSLTYLDGTLPGDFGFDPLGLS-DPE 291 S ++ +YL G PGD+G+D GLS DPE Sbjct: 64 SGEAPSYLTGEFPGDYGWDTAGLSADPE 91
>CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chloroplast precursor| (LHCII type I CAB-22L) (LHCP) Length = 267 Score = 32.0 bits (71), Expect = 0.39 Identities = 15/28 (53%), Positives = 20/28 (71%), Gaps = 1/28 (3%) Frame = +1 Query: 211 SKQSLTYLDGTLPGDFGFDPLGLS-DPE 291 S ++ +YL G PGD+G+D GLS DPE Sbjct: 64 SGEAPSYLTGEFPGDYGWDTAGLSADPE 91
>CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor| (LHCII type I CAB-25) (LHCP) Length = 266 Score = 32.0 bits (71), Expect = 0.39 Identities = 15/28 (53%), Positives = 20/28 (71%), Gaps = 1/28 (3%) Frame = +1 Query: 211 SKQSLTYLDGTLPGDFGFDPLGLS-DPE 291 S ++ +YL G PGD+G+D GLS DPE Sbjct: 63 SGEAPSYLTGEFPGDYGWDTAGLSADPE 90
>CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloroplast precursor| (LHCII type I CAB-M9) (LHCP) Length = 265 Score = 31.6 bits (70), Expect = 0.51 Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 3/48 (6%) Frame = +1 Query: 157 ASSSPPAKQNDNRQLWFA--SKQSLTYLDGTLPGDFGFDPLGLS-DPE 291 A+SS +R L+ S + +YL G PGD+G+D GLS DPE Sbjct: 42 AASSGSPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPE 89
>CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 265 Score = 31.6 bits (70), Expect = 0.51 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 11/58 (18%) Frame = +1 Query: 151 VRASSSPPAKQNDNRQLWFASKQSL----------TYLDGTLPGDFGFDPLGLS-DPE 291 +R +++ P + W+ + + L +YL G PGD+G+D GLS DPE Sbjct: 32 MRKTAAKPKPAASSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPE 89
>CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloroplast precursor| (LHCII type I CAB-3) (LHCP) Length = 263 Score = 31.2 bits (69), Expect = 0.66 Identities = 14/23 (60%), Positives = 17/23 (73%), Gaps = 1/23 (4%) Frame = +1 Query: 226 TYLDGTLPGDFGFDPLGLS-DPE 291 +YL G PGD+G+D GLS DPE Sbjct: 65 SYLTGEFPGDYGWDTAGLSADPE 87
>CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) (Fragment) Length = 245 Score = 31.2 bits (69), Expect = 0.66 Identities = 14/23 (60%), Positives = 17/23 (73%), Gaps = 1/23 (4%) Frame = +1 Query: 226 TYLDGTLPGDFGFDPLGLS-DPE 291 +YL G PGD+G+D GLS DPE Sbjct: 47 SYLTGEFPGDYGWDTAGLSADPE 69
>CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 261 Score = 31.2 bits (69), Expect = 0.66 Identities = 14/23 (60%), Positives = 17/23 (73%), Gaps = 1/23 (4%) Frame = +1 Query: 226 TYLDGTLPGDFGFDPLGLS-DPE 291 +YL G PGD+G+D GLS DPE Sbjct: 63 SYLTGEFPGDYGWDTAGLSADPE 85
>CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 265 Score = 31.2 bits (69), Expect = 0.66 Identities = 14/23 (60%), Positives = 17/23 (73%), Gaps = 1/23 (4%) Frame = +1 Query: 226 TYLDGTLPGDFGFDPLGLS-DPE 291 +YL G PGD+G+D GLS DPE Sbjct: 67 SYLTGEFPGDYGWDTAGLSADPE 89
>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 266 Score = 31.2 bits (69), Expect = 0.66 Identities = 14/23 (60%), Positives = 17/23 (73%), Gaps = 1/23 (4%) Frame = +1 Query: 226 TYLDGTLPGDFGFDPLGLS-DPE 291 +YL G PGD+G+D GLS DPE Sbjct: 67 SYLTGEFPGDYGWDTAGLSADPE 89
>CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) (Fragment) Length = 255 Score = 31.2 bits (69), Expect = 0.66 Identities = 14/23 (60%), Positives = 17/23 (73%), Gaps = 1/23 (4%) Frame = +1 Query: 226 TYLDGTLPGDFGFDPLGLS-DPE 291 +YL G PGD+G+D GLS DPE Sbjct: 57 SYLTGEFPGDYGWDTAGLSADPE 79
>CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chloroplast precursor| (LHCII type I CAB-22R) (LHCP) Length = 267 Score = 31.2 bits (69), Expect = 0.66 Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%) Frame = +1 Query: 157 ASSSPPAKQNDNRQLWFASKQSLTYLDGTLPGDFGFDPLGLS-DPE 291 +SSSP + + L S ++ +YL G P D+G+D GLS DPE Sbjct: 46 SSSSPWYGPDRVKYLGPFSGEAPSYLTGEFPSDYGWDTAGLSADPE 91
>CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII type 1| (Chlorophyll a-b binding protein of LHCII type I) (CAB) (LHCP) (Fragment) Length = 206 Score = 31.2 bits (69), Expect = 0.66 Identities = 14/23 (60%), Positives = 17/23 (73%), Gaps = 1/23 (4%) Frame = +1 Query: 226 TYLDGTLPGDFGFDPLGLS-DPE 291 +YL G PGD+G+D GLS DPE Sbjct: 8 SYLTGEFPGDYGWDTAGLSADPE 30
>CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type II CAB-1A) (LHCP) Length = 278 Score = 31.2 bits (69), Expect = 0.66 Identities = 14/23 (60%), Positives = 17/23 (73%), Gaps = 1/23 (4%) Frame = +1 Query: 226 TYLDGTLPGDFGFDPLGLS-DPE 291 +YL G PGD+G+D GLS DPE Sbjct: 80 SYLTGEFPGDYGWDTAGLSADPE 102
>CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 member 1A,| chloroplast precursor (Chlorophyll a-b binding protein type II 1A) (CAB) (LHCP) Length = 278 Score = 31.2 bits (69), Expect = 0.66 Identities = 14/23 (60%), Positives = 17/23 (73%), Gaps = 1/23 (4%) Frame = +1 Query: 226 TYLDGTLPGDFGFDPLGLS-DPE 291 +YL G PGD+G+D GLS DPE Sbjct: 80 SYLTGEFPGDYGWDTAGLSADPE 102
>LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins precursor| [Contains: LH35 protein 1; LH35 protein 2] (Fragment) Length = 331 Score = 30.8 bits (68), Expect = 0.87 Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 1/31 (3%) Frame = +1 Query: 199 LWFASKQSLTYLDGTLPGDFGFDPLGL-SDP 288 +WF Q +L G P D GFDPL + +DP Sbjct: 161 VWFPGAQPPAHLTGEYPADRGFDPLSVAADP 191
>CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloroplast| precursor (Light-harvesting complex II protein 5) (LHCB5) (LHCIIc) Length = 280 Score = 30.8 bits (68), Expect = 0.87 Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 6/41 (14%) Frame = +1 Query: 229 YLDGTLPGDFGFDPLGL-SDPEGTGGF-----IEPRWLAYG 333 YL+G + GD+G+DP GL PE + I RW G Sbjct: 84 YLNGEVAGDYGYDPFGLGKKPENFAKYQAFELIHARWAMLG 124
>CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloroplast precursor| (LHCII type I CAB-48) (LHCP) Length = 264 Score = 30.4 bits (67), Expect = 1.1 Identities = 14/23 (60%), Positives = 17/23 (73%), Gaps = 1/23 (4%) Frame = +1 Query: 226 TYLDGTLPGDFGFDPLGLS-DPE 291 +YL G PGD+G+D GLS DPE Sbjct: 66 SYLTGEFPGDYGWDTEGLSADPE 88
>FCP_ISOGA (Q39709) Fucoxanthin-chlorophyll a-c binding protein, chloroplast| precursor (FCP) Length = 208 Score = 30.4 bits (67), Expect = 1.1 Identities = 14/21 (66%), Positives = 16/21 (76%), Gaps = 2/21 (9%) Frame = +1 Query: 235 DGTLPGDFGFDPLGL--SDPE 291 +G PGD GFDPLGL SDP+ Sbjct: 145 EGYEPGDLGFDPLGLAPSDPD 165
>AROC_METKA (Q8TXN1) Chorismate synthase (EC 4.2.3.5)| (5-enolpyruvylshikimate-3-phosphate phospholyase) Length = 386 Score = 30.0 bits (66), Expect = 1.5 Identities = 15/43 (34%), Positives = 22/43 (51%) Frame = -1 Query: 345 VEDLAVGQPPGLDEPAGALRVGQPQGVEAKVTRQRAVEVGEGL 217 +E +A PPGL +P G+ G + +AVEVG G+ Sbjct: 216 IEVIAENVPPGLGDPVFGRLDGELAGALMNIPAVKAVEVGSGV 258
>CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type I CAB-13) (LHCP) Length = 266 Score = 30.0 bits (66), Expect = 1.5 Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 1/27 (3%) Frame = +1 Query: 211 SKQSLTYLDGTLPGDFGFDPLGLS-DP 288 S ++ +YL G PGD+G+D GLS DP Sbjct: 63 SGEAPSYLTGEFPGDYGWDTAGLSADP 89
>NAC3_RAT (P70549) Sodium/calcium exchanger 3 precursor| (Na(+)/Ca(2+)-exchange protein 3) Length = 927 Score = 30.0 bits (66), Expect = 1.5 Identities = 17/56 (30%), Positives = 32/56 (57%), Gaps = 5/56 (8%) Frame = -1 Query: 336 LAVGQPPGLDEPAGALRVGQPQGVEAKVTRQ-----RAVEVGEGLLGREPQLPVVI 184 +A+G+P ++ AL + P+ + K+T + R E+G+ +LG P+L V+I Sbjct: 616 IALGEPKWMERGISALLLS-PEVTDRKLTMEEEEAKRIAEMGKPVLGEHPKLEVII 670
>CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 269 Score = 29.6 bits (65), Expect = 1.9 Identities = 14/28 (50%), Positives = 20/28 (71%), Gaps = 1/28 (3%) Frame = +1 Query: 211 SKQSLTYLDGTLPGDFGFDPLGL-SDPE 291 S ++ +YL+G GD+G+D GL SDPE Sbjct: 65 SGETPSYLNGEFAGDYGWDTAGLSSDPE 92
>SYE1_WOLPM (Q73HV5) Glutamyl-tRNA synthetase 1 (EC 6.1.1.17) (Glutamate--tRNA| ligase 1) (GluRS 1) Length = 473 Score = 29.3 bits (64), Expect = 2.5 Identities = 13/35 (37%), Positives = 15/35 (42%) Frame = -2 Query: 164 DDALTTKGDFREEDDLEKEDCRGLPSSCLPERRPW 60 D+ K REE + K C P SC P R W Sbjct: 104 DEVAEKKAKAREEGKIYKHKCTTKPPSCHPSSRHW 138
>NAC3_HUMAN (P57103) Sodium/calcium exchanger 3 precursor| (Na(+)/Ca(2+)-exchange protein 3) Length = 927 Score = 29.3 bits (64), Expect = 2.5 Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 5/56 (8%) Frame = -1 Query: 336 LAVGQPPGLDEPAGALRVGQPQGVEAKVTRQ-----RAVEVGEGLLGREPQLPVVI 184 +A+G+P ++ AL + P + K+T + R E+G+ +LG P+L V+I Sbjct: 616 IALGEPKWMERGISALLLS-PDVTDRKLTMEEEEAKRIAEMGKPVLGEHPKLEVII 670
>OMPY_CHLPN (Q9Z6M5) Putative outer membrane protein| CPn_1034/CP0818/CPj1034/CpB1074 precursor Length = 262 Score = 28.9 bits (63), Expect = 3.3 Identities = 15/48 (31%), Positives = 22/48 (45%) Frame = -2 Query: 188 SFCLAGGLDDALTTKGDFREEDDLEKEDCRGLPSSCLPERRPWAAIVP 45 +F L LDD L G+ + + +GL PE+ W A+VP Sbjct: 41 NFWLILDLDDTLLQGGEALSHSIWKSKAIQGLQKQGTPEQEAWEAVVP 88
>GUC2E_RAT (P51840) Guanylyl cyclase GC-E precursor (EC 4.6.1.2) (Guanylate| cyclase 2E) Length = 1108 Score = 28.9 bits (63), Expect = 3.3 Identities = 13/26 (50%), Positives = 17/26 (65%) Frame = +2 Query: 257 LASTPWGCPTRRAPAGSSSPGGWPTA 334 +A PWGCP RA AG+++P P A Sbjct: 148 VALVPWGCPGTRA-AGTTAPAVTPAA 172
>GUC2E_MOUSE (P52785) Guanylyl cyclase GC-E precursor (EC 4.6.1.2) (Guanylate| cyclase 2E) Length = 1108 Score = 28.9 bits (63), Expect = 3.3 Identities = 13/26 (50%), Positives = 17/26 (65%) Frame = +2 Query: 257 LASTPWGCPTRRAPAGSSSPGGWPTA 334 +A PWGCP RA AG+++P P A Sbjct: 148 VALVPWGCPGTRA-AGTTAPAVTPAA 172
>CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chloroplast| precursor (LHCII type I CAB-AB10) (LHCP) Length = 268 Score = 28.9 bits (63), Expect = 3.3 Identities = 11/19 (57%), Positives = 14/19 (73%) Frame = +1 Query: 226 TYLDGTLPGDFGFDPLGLS 282 +YL G PGD+G+D GLS Sbjct: 71 SYLTGEFPGDYGWDTAGLS 89
>CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chloroplast precursor| (LHCII type I CAB-91R) (LHCP) Length = 267 Score = 28.9 bits (63), Expect = 3.3 Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 1/28 (3%) Frame = +1 Query: 211 SKQSLTYLDGTLPGDFGFDPLGLS-DPE 291 S ++ +YL G PGD+G+D LS DPE Sbjct: 64 SGEAPSYLTGEFPGDYGWDTAELSADPE 91
>CBID_METCH (Q9X7G7) Putative cobalt-precorrin-6A synthase [deacetylating] (EC| 2.1.1.-) Length = 361 Score = 28.5 bits (62), Expect = 4.3 Identities = 19/49 (38%), Positives = 24/49 (48%) Frame = -1 Query: 312 LDEPAGALRVGQPQGVEAKVTRQRAVEVGEGLLGREPQLPVVILLGRGA 166 ++ GALR G G A + A E LLG EP+ PV + L GA Sbjct: 1 MNSETGALRRGWTTGTCASAAARAAFEA---LLGIEPEDPVPVTLPSGA 46
>GUC2D_CANFA (O19179) Retinal guanylyl cyclase 1 precursor (EC 4.6.1.2)| (Guanylate cyclase 2D, retinal) (RETGC-1) (Rod outer segment membrane guanylate cyclase) (ROS-GC) (Guanylate cyclase E) (GC-E) Length = 1109 Score = 28.5 bits (62), Expect = 4.3 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = +2 Query: 257 LASTPWGCPTRRAPAGSSSPGGWPTA 334 +A PW CP RA G+++P G P A Sbjct: 149 VALVPWSCPGTRA-GGTTAPAGTPAA 173
>EDD_RHIME (Q9Z3S0) Phosphogluconate dehydratase (EC 4.2.1.12)| (6-phosphogluconate dehydratase) Length = 606 Score = 28.5 bits (62), Expect = 4.3 Identities = 20/60 (33%), Positives = 26/60 (43%) Frame = -1 Query: 336 LAVGQPPGLDEPAGALRVGQPQGVEAKVTRQRAVEVGEGLLGREPQLPVVILLGRGAGRC 157 L G P + PAG + G P +AKV + A EG +GR+ L G G C Sbjct: 168 LTFGHLPAVFIPAGPMTTGLPNDEKAKVRQLFA----EGKVGRDELLEAESKSYHGPGTC 223
>REP2_YEAST (P03872) Trans-acting factor C (REP2) (Protein charlie)| Length = 296 Score = 28.1 bits (61), Expect = 5.6 Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 5/52 (9%) Frame = -1 Query: 345 VEDLAVGQPPGLDEPAGALRVGQPQGVE-----AKVTRQRAVEVGEGLLGRE 205 +E L G+P GLD A V E AK+ ++R +G G+L + Sbjct: 58 MESLTTGRPYGLDSSAEDSSVSSDSSAEVILPAAKMVKERFDSIGNGMLSSQ 109
>CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chloroplast| precursor (CAB) (LHCP) Length = 266 Score = 28.1 bits (61), Expect = 5.6 Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 1/28 (3%) Frame = +1 Query: 211 SKQSLTYLDGTLPGDFGFDPLGLS-DPE 291 S+ + +YL G PGD+G+D +S DPE Sbjct: 63 SEGTPSYLTGEFPGDYGWDTAAVSADPE 90
>GUC2D_BOVIN (P55203) Retinal guanylyl cyclase 1 precursor (EC 4.6.1.2)| (Guanylate cyclase 2D, retinal) (RETGC-1) (Rod outer segment membrane guanylate cyclase) (ROS-GC) (Guanylate cyclase E) (GC-E) Length = 1110 Score = 27.7 bits (60), Expect = 7.3 Identities = 13/26 (50%), Positives = 17/26 (65%) Frame = +2 Query: 257 LASTPWGCPTRRAPAGSSSPGGWPTA 334 +A PWGCP RA AG+++P P A Sbjct: 150 VALVPWGCPGTRA-AGTTAPVVTPAA 174
>SALL2_MOUSE (Q9QX96) Sal-like protein 2 (Spalt-like protein 2) (MSal-2)| Length = 1004 Score = 27.7 bits (60), Expect = 7.3 Identities = 14/24 (58%), Positives = 15/24 (62%) Frame = +2 Query: 251 VTLASTPWGCPTRRAPAGSSSPGG 322 V +AST G PT APA SSS G Sbjct: 604 VAVASTASGAPTTSAPAPSSSASG 627
>FBSH_HUMAN (Q9HAH7) Probable fibrosin-1 long transcript protein| Length = 372 Score = 27.7 bits (60), Expect = 7.3 Identities = 11/19 (57%), Positives = 13/19 (68%) Frame = +1 Query: 271 LGLSDPEGTGGFIEPRWLA 327 LG S P+ GF+EP WLA Sbjct: 260 LGPSPPDRCAGFLEPTWLA 278
>AROC_WOLSU (Q7M841) Chorismate synthase (EC 4.2.3.5)| (5-enolpyruvylshikimate-3-phosphate phospholyase) Length = 360 Score = 27.7 bits (60), Expect = 7.3 Identities = 17/43 (39%), Positives = 21/43 (48%) Frame = -1 Query: 345 VEDLAVGQPPGLDEPAGALRVGQPQGVEAKVTRQRAVEVGEGL 217 +E A G P GL EP G G + +AVE+GEGL Sbjct: 204 IEVRAKGMPIGLGEPLYHKLDGALGGALMGLNAVKAVEIGEGL 246
>CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 273 Score = 27.3 bits (59), Expect = 9.6 Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 1/31 (3%) Frame = +1 Query: 202 WFASKQSLTYLDGTLPGDFGFDPLGLS-DPE 291 W Q G PGD+G+D GLS DPE Sbjct: 66 WDLQHQHPRLPTGEFPGDYGWDTAGLSADPE 96 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.315 0.136 0.418 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 40,704,470 Number of Sequences: 219361 Number of extensions: 709180 Number of successful extensions: 2085 Number of sequences better than 10.0: 88 Number of HSP's better than 10.0 without gapping: 1972 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2085 length of database: 80,573,946 effective HSP length: 90 effective length of database: 60,831,456 effective search space used: 1459954944 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits)
