ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal16g09 |
|---|---|
| Clone Library Name | barley_pub |
>XPB1_ARATH (Q38861) DNA repair helicase XPB1 (EC 3.6.1.-) (XPB homolog 1) (ERCC3| homolog 1) (RAD25 homolog 1) (AtXPB1) (Protein araXPB) Length = 767 Score = 228 bits (581), Expect = 8e-60 Identities = 116/161 (72%), Positives = 129/161 (80%), Gaps = 6/161 (3%) Frame = +3 Query: 24 AQRLGRILRAKGKHQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVI 203 AQRLGRILRAKGK +DRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVI Sbjct: 606 AQRLGRILRAKGKLEDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVI 665 Query: 204 TSLPPPEEGPNLSFHTLDEQLDLLGKVLSAGDDMIGVEHLEEDSDGKALLKARRSAGLMS 383 TSLPPP+ G +LS+H+ +EQL LLGKV++AGDD++G+E LEED+DG AL KARRS G MS Sbjct: 666 TSLPPPDAGSSLSYHSQEEQLSLLGKVMNAGDDLVGLEQLEEDTDGMALQKARRSMGSMS 725 Query: 384 AFSGAGGMVYMEYNXXXXXXXXXX------XXRHTLFKKRY 488 SG+ GMVYMEYN RH LFKKRY Sbjct: 726 VMSGSKGMVYMEYNSGRHKSGQQFKKPKDPTKRHNLFKKRY 766
>XPB2_ARATH (Q9FUG4) DNA repair helicase XPB2 (EC 3.6.1.-) (XPB homolog 2) (ERCC3| homolog 2) (RAD25 homolog 2) (AtXPB2) Length = 766 Score = 226 bits (576), Expect = 3e-59 Identities = 117/161 (72%), Positives = 128/161 (79%), Gaps = 6/161 (3%) Frame = +3 Query: 24 AQRLGRILRAKGKHQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVI 203 AQRLGRILRAKGK +DRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVI Sbjct: 606 AQRLGRILRAKGKLEDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVI 665 Query: 204 TSLPPPEEGPNLSFHTLDEQLDLLGKVLSAGDDMIGVEHLEEDSDGKALLKARRSAGLMS 383 TSLPPP+ G +L +H+ +EQL LLGKVL+AGDDM+G+E LEED+DGKA LK RRS G MS Sbjct: 666 TSLPPPDAGSSLGYHSQEEQLSLLGKVLNAGDDMVGLEQLEEDTDGKA-LKTRRSMGSMS 724 Query: 384 AFSGAGGMVYMEYNXXXXXXXXXX------XXRHTLFKKRY 488 A SGA G VYMEYN RH +FKKRY Sbjct: 725 AMSGANGRVYMEYNSGRQKSGNQSKKPKDPTKRHNIFKKRY 765
>ERCC3_SCHPO (O13768) Probable DNA repair helicase ercc3 (EC 3.6.1.-)| Length = 804 Score = 128 bits (321), Expect = 1e-29 Identities = 76/159 (47%), Positives = 100/159 (62%), Gaps = 6/159 (3%) Frame = +3 Query: 24 AQRLGRILRAKGKHQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVI 203 AQRLGRILRAK ++ E +NAFFYSLVS DTQEMYYS+KRQ FLIDQGY+FKVI Sbjct: 646 AQRLGRILRAKRRND-------EGFNAFFYSLVSKDTQEMYYSSKRQAFLIDQGYAFKVI 698 Query: 204 TSLPPPEEGPNLSFHTLDEQLDLLGKVLSAGDDMIGVEHLEEDSDG-----KALLKARRS 368 T+L E PNL++ + E+L+LL +VL ++ ++ E+ S G +A KA+RS Sbjct: 699 TNLKGMENLPNLAYASKAERLELLQEVLLQNEEAADLDDGEDTSFGSRSLSRAPAKAKRS 758 Query: 369 AGLMSAFSGAGGMVYMEYN-XXXXXXXXXXXXRHTLFKK 482 +G +S +GA M Y+EYN H LF+K Sbjct: 759 SGSLSTLAGADNMAYVEYNKSANKQLKKDSKEHHALFRK 797
>ERCC3_MOUSE (P49135) TFIIH basal transcription factor complex helicase XPB| subunit (EC 3.6.1.-) (Basic transcription factor 2 89 kDa subunit) (BTF2-p89) (TFIIH 89 kDa subunit) (DNA-repair protein complementing XP-B cells) (Xeroderma pigmentosum group B c Length = 783 Score = 123 bits (308), Expect = 3e-28 Identities = 80/153 (52%), Positives = 94/153 (61%) Frame = +3 Query: 24 AQRLGRILRAKGKHQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVI 203 AQRLGR+LRAK + +A EEYNAFFYSLVS DTQEM YSTKRQ+FL+DQGYSFKVI Sbjct: 638 AQRLGRVLRAK---KGMVA---EEYNAFFYSLVSQDTQEMAYSTKRQRFLVDQGYSFKVI 691 Query: 204 TSLPPPEEGPNLSFHTLDEQLDLLGKVLSAGDDMIGVEHLEEDSDGKALLKARRSAGLMS 383 T L EE L+F T +EQ LL KVL+A D+ E + G +A R G MS Sbjct: 692 TKLAGMEE-EELAFSTKEEQQQLLQKVLAA-TDLDAEEEVVAGEFGSRSGQASRRCGTMS 749 Query: 384 AFSGAGGMVYMEYNXXXXXXXXXXXXRHTLFKK 482 + SGA VYMEY+ H LFK+ Sbjct: 750 SLSGADDTVYMEYHSSRSKASSKHV--HPLFKR 780
>ERCC3_MACFA (Q60HG1) TFIIH basal transcription factor complex helicase XPB| subunit (EC 3.6.1.-) (Basic transcription factor 2 89 kDa subunit) (BTF2-p89) (TFIIH 89 kDa subunit) (DNA-repair protein complementing XP-B cells) (Xeroderma pigmentosum group B-c Length = 782 Score = 122 bits (307), Expect = 5e-28 Identities = 80/153 (52%), Positives = 95/153 (62%) Frame = +3 Query: 24 AQRLGRILRAKGKHQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVI 203 AQRLGR+LRAK + +A EEYNAFFYSLVS DTQEM YSTKRQ+FL+DQGYSFKVI Sbjct: 637 AQRLGRVLRAK---KGMVA---EEYNAFFYSLVSQDTQEMAYSTKRQRFLVDQGYSFKVI 690 Query: 204 TSLPPPEEGPNLSFHTLDEQLDLLGKVLSAGDDMIGVEHLEEDSDGKALLKARRSAGLMS 383 T L EE +L+F T +EQ LL KVL+A D+ E + G +A R G MS Sbjct: 691 TKLAGMEE-EDLAFSTKEEQQQLLQKVLAA-TDLDAEEEVVAGEFGSRSSQASRRFGTMS 748 Query: 384 AFSGAGGMVYMEYNXXXXXXXXXXXXRHTLFKK 482 + SGA VYMEY+ H LFK+ Sbjct: 749 SMSGADDTVYMEYHSSRSKAPSKHV--HPLFKR 779
>ERCC3_HUMAN (P19447) TFIIH basal transcription factor complex helicase XPB| subunit (EC 3.6.1.-) (Basic transcription factor 2 89 kDa subunit) (BTF2-p89) (TFIIH 89 kDa subunit) (DNA-repair protein complementing XP-B cells) (Xeroderma pigmentosum group B c Length = 782 Score = 122 bits (307), Expect = 5e-28 Identities = 80/153 (52%), Positives = 95/153 (62%) Frame = +3 Query: 24 AQRLGRILRAKGKHQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVI 203 AQRLGR+LRAK + +A EEYNAFFYSLVS DTQEM YSTKRQ+FL+DQGYSFKVI Sbjct: 637 AQRLGRVLRAK---KGMVA---EEYNAFFYSLVSQDTQEMAYSTKRQRFLVDQGYSFKVI 690 Query: 204 TSLPPPEEGPNLSFHTLDEQLDLLGKVLSAGDDMIGVEHLEEDSDGKALLKARRSAGLMS 383 T L EE +L+F T +EQ LL KVL+A D+ E + G +A R G MS Sbjct: 691 TKLAGMEE-EDLAFSTKEEQQQLLQKVLAA-TDLDAEEEVVAGEFGSRSSQASRRFGTMS 748 Query: 384 AFSGAGGMVYMEYNXXXXXXXXXXXXRHTLFKK 482 + SGA VYMEY+ H LFK+ Sbjct: 749 SMSGADDTVYMEYHSSRSKAPSKHV--HPLFKR 779
>RAD25_YEAST (Q00578) DNA repair helicase RAD25 (EC 3.6.1.-) (General| transcription and DNA repair factor IIH subunit RAD25) (TFIIH subunit RAD25) Length = 843 Score = 115 bits (289), Expect = 6e-26 Identities = 73/165 (44%), Positives = 95/165 (57%), Gaps = 10/165 (6%) Frame = +3 Query: 24 AQRLGRILRAKGKHQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVI 203 AQRLGRILRAK ++ E +NAFFYSLVS DTQEMYYSTKRQ FL+DQGY+FKVI Sbjct: 684 AQRLGRILRAKRRND-------EGFNAFFYSLVSKDTQEMYYSTKRQAFLVDQGYAFKVI 736 Query: 204 TSLPPPEEGPNLSFHTLDEQLDLLGKVLSAGDDMIGVEHLEEDSDG----------KALL 353 T L E PNL++ + E+ +LL +VL ++ G+E + +D+D + Sbjct: 737 THLHGMENIPNLAYASPRERRELLQEVLLKNEEAAGIE-VGDDADNSVGRGSNGHKRFKS 795 Query: 354 KARRSAGLMSAFSGAGGMVYMEYNXXXXXXXXXXXXRHTLFKKRY 488 KA R G +S +G M YMEY+ H L +K Y Sbjct: 796 KAVRGEGSLSGLAGGEDMAYMEYS---TNKNKELKEHHPLIRKMY 837
>ERCC3_DROME (Q02870) DNA excision repair protein haywire (EC 3.6.1.-)| (ATP-dependent DNA helicase hay) (ERCC-3 homolog protein) Length = 798 Score = 97.4 bits (241), Expect = 2e-20 Identities = 68/159 (42%), Positives = 83/159 (52%), Gaps = 6/159 (3%) Frame = +3 Query: 24 AQRLGRILRAKGKHQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVI 203 AQRLGRILRAK EEYNAFFY+LVS DT EM YS KRQ+FL++QGYS+KVI Sbjct: 653 AQRLGRILRAK------KGAIAEEYNAFFYTLVSQDTMEMSYSRKRQRFLVNQGYSYKVI 706 Query: 204 TSLPPPEEGPNLSFHTLDEQLDLLGKVLSAGD------DMIGVEHLEEDSDGKALLKARR 365 T L + +L + T +EQ LL VLSA D + G G A+ R Sbjct: 707 THLKGMDTDSDLMYGTQEEQGQLLQLVLSASDLDCEDEKLPGEPGYRPSGSGGAV----R 762 Query: 366 SAGLMSAFSGAGGMVYMEYNXXXXXXXXXXXXRHTLFKK 482 G +S+ SG +Y E+ H LFKK Sbjct: 763 RVGGLSSMSGGDDAIYYEHRKKNIGSV------HPLFKK 795
>PER1_RAT (Q8CHI5) Period circadian protein 1 (rPER1) (Fragment)| Length = 1244 Score = 32.7 bits (73), Expect = 0.61 Identities = 13/35 (37%), Positives = 17/35 (48%) Frame = -2 Query: 405 FHPLQKMRSLIQQSAEPSGEPCHQNPLPSAQHQSC 301 F L ++R L S PS CH P+PS + C Sbjct: 797 FRDLGRLRGLDTSSVAPSAPGCHHGPIPSGRRHHC 831
>ABCA2_MOUSE (P41234) ATP-binding cassette sub-family A member 2 (ATP-binding| cassette transporter 2) (ATP-binding cassette 2) Length = 2434 Score = 32.0 bits (71), Expect = 1.0 Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 3/94 (3%) Frame = -1 Query: 484 RFLNSVCLLAGSFFLAPLPLLYSM*TIP-PAPENALINPAER--RAFRRALPSESSSKCS 314 RF +S+CL + F LPL + P PAP ++ ++P E +A+ +LP + + Sbjct: 1569 RFFDSMCLES---FTQGLPLSNFVPPPPSPAPSDSPVSPDEDSLQAWNMSLPPTAGPETW 1625 Query: 313 TPIMSSPALNTLPKRSSCSSSV*KLRLGPSSGGG 212 T S P L P R +CS+ PSS GG Sbjct: 1626 TSAPSLPRLVHEPVRCTCSAQGTGFSC-PSSVGG 1658
>RPOB_BACLD (Q65PB5) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1193 Score = 31.2 bits (69), Expect = 1.8 Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 3/45 (6%) Frame = +3 Query: 219 PEEGPNLSFHTLDEQLDLLG---KVLSAGDDMIGVEHLEEDSDGK 344 PE G SF L ++L LG K+LS+ ++ I + LE+D D K Sbjct: 1120 PEPGVPESFKVLIKELQSLGMDVKILSSDEEEIEMRDLEDDEDAK 1164
>SYFB_BACC1 (Q72ZI2) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)| (Phenylalanine--tRNA ligase beta chain) (PheRS) Length = 806 Score = 31.2 bits (69), Expect = 1.8 Identities = 27/125 (21%), Positives = 54/125 (43%), Gaps = 6/125 (4%) Frame = +3 Query: 36 GRILRAKGKHQD--RMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITS 209 G++ A+ K + R G Y A YSL STD K +Q++++ V + Sbjct: 494 GKLTSAQTKRRKVRRFLEGAGLYEAITYSLTSTD--------KAKQYMVEPNEKAPVALA 545 Query: 210 LPPPEEGPNLSFHTLDEQLDLLGKVLSAGDDMIGVEHLEE----DSDGKALLKARRSAGL 377 LP EE L + + L+ + ++ +D + + + +G+ + + AG+ Sbjct: 546 LPMSEERSQLRLSLVPQLLEAVSYNVARKNDSVALYEVGSIFLPTEEGELPKEEQHLAGV 605 Query: 378 MSAFS 392 M+ + Sbjct: 606 MTGLA 610
>SPEG_RAT (Q63638) Striated muscle-specific serine/threonine protein kinase| (EC 2.7.11.1) (Aortic preferentially expressed protein 1) (APEG-1) Length = 3259 Score = 31.2 bits (69), Expect = 1.8 Identities = 20/75 (26%), Positives = 32/75 (42%) Frame = -1 Query: 406 IPPAPENALINPAERRAFRRALPSESSSKCSTPIMSSPALNTLPKRSSCSSSV*KLRLGP 227 +PP ++AL+ P R +RALP S+ +TP +++ K P Sbjct: 303 LPPPSKSALLPPPSPRVGKRALPGSSAQPPATPTSPHRCTQEPSLPEDITTTEEKRGKKP 362 Query: 226 SSGGGKLVMTLKLYP 182 S G L T++ P Sbjct: 363 KSSGPSLAGTVESRP 377
>PER1_MOUSE (O35973) Period circadian protein 1 (Circadian pacemaker protein| Rigui) (mPER) (M-Rigui) Length = 1291 Score = 30.8 bits (68), Expect = 2.3 Identities = 12/35 (34%), Positives = 16/35 (45%) Frame = -2 Query: 405 FHPLQKMRSLIQQSAEPSGEPCHQNPLPSAQHQSC 301 F L ++R L S PS CH P+P + C Sbjct: 798 FRDLGRLRGLDTSSVAPSAPGCHHGPIPPGRRHHC 832
>SPEG_MOUSE (Q62407) Striated muscle-specific serine/threonine protein kinase| (EC 2.7.11.1) (Aortic preferentially expressed protein 1) (APEG-1) Length = 3262 Score = 30.4 bits (67), Expect = 3.0 Identities = 20/75 (26%), Positives = 32/75 (42%) Frame = -1 Query: 406 IPPAPENALINPAERRAFRRALPSESSSKCSTPIMSSPALNTLPKRSSCSSSV*KLRLGP 227 +PP ++AL+ P R +RALP S+ +TP +++ K P Sbjct: 303 LPPPSKSALLPPPSPRVGKRALPGPSTQPPATPTSPHRRAQEPSLPEDITTTEEKRGKKP 362 Query: 226 SSGGGKLVMTLKLYP 182 S G L T++ P Sbjct: 363 KSSGPSLAGTVESRP 377
>GLI3_PANTR (Q5IS56) Zinc finger protein GLI3| Length = 1580 Score = 30.4 bits (67), Expect = 3.0 Identities = 24/71 (33%), Positives = 31/71 (43%) Frame = +3 Query: 153 TKRQQFLIDQGYSFKVITSLPPPEEGPNLSFHTLDEQLDLLGKVLSAGDDMIGVEHLEED 332 T QQ+ + Y+ T PPP PN+ +L +L LLG L G + V Sbjct: 922 TPAQQYRLKAKYA--AATGGPPPTPLPNMERMSLKTRLALLGDALEPGVALPPVHAPRRC 979 Query: 333 SDGKALLKARR 365 SDG A RR Sbjct: 980 SDGGAHGYGRR 990
>GLI3_HUMAN (P10071) Zinc finger protein GLI3| Length = 1580 Score = 30.4 bits (67), Expect = 3.0 Identities = 24/71 (33%), Positives = 31/71 (43%) Frame = +3 Query: 153 TKRQQFLIDQGYSFKVITSLPPPEEGPNLSFHTLDEQLDLLGKVLSAGDDMIGVEHLEED 332 T QQ+ + Y+ T PPP PN+ +L +L LLG L G + V Sbjct: 922 TPAQQYRLKAKYA--AATGGPPPTPLPNMERMSLKTRLALLGDALEPGVALPPVHAPRRC 979 Query: 333 SDGKALLKARR 365 SDG A RR Sbjct: 980 SDGGAHGYGRR 990
>SMC3_YEAST (P47037) Structural maintenance of chromosome 3 (DA-box protein| SMC3) Length = 1230 Score = 30.0 bits (66), Expect = 4.0 Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 2/86 (2%) Frame = +3 Query: 63 HQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQ--QFLIDQGYSFKVITSLPPPEEGPN 236 HQ+ + G + F++ + + Y + KR+ Q LI QG V+++ Sbjct: 26 HQNVIIGSNGSGKSNFFAAIRFVLSDDYSNLKREERQGLIHQGSGGSVMSA------SVE 79 Query: 237 LSFHTLDEQLDLLGKVLSAGDDMIGV 314 + FH D + L VLS GDD + + Sbjct: 80 IVFHDPDHSMILPSGVLSRGDDEVTI 105
>VRP1_YEAST (P37370) Verprolin| Length = 817 Score = 30.0 bits (66), Expect = 4.0 Identities = 24/77 (31%), Positives = 32/77 (41%), Gaps = 6/77 (7%) Frame = -1 Query: 481 FLNSVCLLAGSFFLAPLP------LLYSM*TIPPAPENALINPAERRAFRRALPSESSSK 320 F S L A S LAPLP + S+ + PP P N + + + S SSS Sbjct: 409 FSTSSALSASSIPLAPLPPPPPPSVATSVPSAPPPPPTLTTNKPSASSKQSKISSSSSSS 468 Query: 319 CSTPIMSSPALNTLPKR 269 TP P L + K+ Sbjct: 469 AVTPGGPLPFLAEIQKK 485
>NELFA_DROME (Q86NP2) Negative elongation factor A homolog| Length = 1248 Score = 29.6 bits (65), Expect = 5.2 Identities = 14/34 (41%), Positives = 22/34 (64%) Frame = -1 Query: 376 NPAERRAFRRALPSESSSKCSTPIMSSPALNTLP 275 +P+ +RA ALPS S+S +T + S A+ T+P Sbjct: 615 SPSAQRAKALALPSSSTSATTTTTIPSQAIKTMP 648
>TAT_HV1MA (P04613) TAT protein (Transactivating regulatory protein)| Length = 87 Score = 29.3 bits (64), Expect = 6.8 Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 3/29 (10%) Frame = -2 Query: 372 QQSAEPSGEPCHQNPL---PSAQHQSCHP 295 Q+ P G HQ+PL PS+QH+ HP Sbjct: 54 QRRRPPQGNQAHQDPLPEQPSSQHRGDHP 82
>SAHH_ROSDE (Q9ZNA5) Adenosylhomocysteinase (EC 3.3.1.1)| (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase) Length = 462 Score = 29.3 bits (64), Expect = 6.8 Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 5/55 (9%) Frame = +3 Query: 222 EEGPNLSFHTLDEQLD-----LLGKVLSAGDDMIGVEHLEEDSDGKALLKARRSA 371 E+GPNL LD+ D LLG AG+++I V EE+ KA +K R +A Sbjct: 119 EDGPNL---ILDDGGDATLYVLLGARAEAGEEIIPVPTSEEEEAIKAQIKKRMAA 170
>RDRP_ROTGI (P35942) RNA-directed RNA polymerase subunit VP1 (EC 2.7.7.48) (Inner| layer protein VP1) (Core protein VP1) Length = 1159 Score = 29.3 bits (64), Expect = 6.8 Identities = 20/64 (31%), Positives = 30/64 (46%) Frame = -1 Query: 370 AERRAFRRALPSESSSKCSTPIMSSPALNTLPKRSSCSSSV*KLRLGPSSGGGKLVMTLK 191 A + FR L S+ STP + L T+P + + V +RLG ++VM L Sbjct: 1047 ASKMLFRDLLMSKYDDLYSTPGFGATQLTTIPLDVTSAEKVFSIRLGLPPHLYEVVMLLL 1106 Query: 190 LYPW 179 LY + Sbjct: 1107 LYEY 1110
>MURB_BUCBP (P59450) UDP-N-acetylenolpyruvoylglucosamine reductase (EC| 1.1.1.158) (UDP-N-acetylmuramate dehydrogenase) Length = 334 Score = 29.3 bits (64), Expect = 6.8 Identities = 13/57 (22%), Positives = 29/57 (50%) Frame = +1 Query: 58 VSIKIGWQVEKKNTMPFSILLYQPTHRKCIIRQKGNNSLSTRDIVSRSSLACRHLKK 228 + + GW +EK FS+ + H++ +I NN ++++I+ + + +KK Sbjct: 264 IKLSAGWLIEKCKLKNFSVGNAKIYHKQALILINKNNLATSKNIIKLAKIIISKVKK 320
>AZI1_HUMAN (Q9UPN4) 5-azacytidine-induced protein 1 (Pre-acrosome localization| protein 1) (Centrosomal protein of 131 kDa) (Cep131 protein) Length = 1083 Score = 28.9 bits (63), Expect = 8.9 Identities = 21/75 (28%), Positives = 32/75 (42%) Frame = -1 Query: 391 ENALINPAERRAFRRALPSESSSKCSTPIMSSPALNTLPKRSSCSSSV*KLRLGPSSGGG 212 + A+ N R PSE + + ++P+LN + K ++C S SSG G Sbjct: 175 KGAVGNCVTTMVHNRYTPSERAPPLKSSNQTAPSLNNIIKAATCEGS-------ESSGFG 227 Query: 211 KLVMTLKLYPWSIRN 167 KL + S RN Sbjct: 228 KLPKNVSSATHSARN 242
>PGKH_CHLRE (P41758) Phosphoglycerate kinase, chloroplast precursor (EC| 2.7.2.3) Length = 461 Score = 28.9 bits (63), Expect = 8.9 Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 3/71 (4%) Frame = +3 Query: 114 SLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPPPEEGPNLSFH---TLDEQLDLLGKV 284 +L TD + + ++L+D G + + L P+ GP + + +LLGK Sbjct: 92 TLAITDDTRIRAAVPTLKYLLDNGAKVLLTSHLGRPKGGPEDKYRLTPVVARLSELLGKP 151 Query: 285 LSAGDDMIGVE 317 ++ DD IG E Sbjct: 152 VTKVDDCIGPE 162
>Y1595_STAS1 (Q49WV8) Uncharacterized N-acetyltransferase SSP1595 (EC 2.3.1.-)| Length = 146 Score = 28.9 bits (63), Expect = 8.9 Identities = 18/53 (33%), Positives = 24/53 (45%) Frame = +3 Query: 45 LRAKGKHQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVI 203 L KG+ ++ G ++YN + V D Q Y T F DQG KVI Sbjct: 62 LYRKGEVEETHFPGFDDYNVIWKLEVLRDFQGRGYGTSLLDFAKDQGLPIKVI 114
>NOEI_RHISN (P55473) Nodulation protein noeI| Length = 243 Score = 28.9 bits (63), Expect = 8.9 Identities = 18/66 (27%), Positives = 29/66 (43%) Frame = +3 Query: 54 KGKHQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPPPEEGP 233 +G D +AGGKE + QE+Y + ++D SF+++ P EG Sbjct: 176 QGAESDVIAGGKETLTKTRFIYTEYSDQELYEGQLPLRAILDLLPSFELVAQFPRGVEGD 235 Query: 234 NLSFHT 251 L +T Sbjct: 236 VLLRNT 241
>DUET_HUMAN (Q9Y2A5) Serine/threonine-protein kinase Duet (EC 2.7.11.1)| (Serine/threonine kinase with Dbl- and pleckstrin homology domain) Length = 1289 Score = 28.9 bits (63), Expect = 8.9 Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 9/53 (16%) Frame = -2 Query: 453 GPS-SWL--PCPCCTPCRPFHPLQ------KMRSLIQQSAEPSGEPCHQNPLP 322 GPS WL C CC PCR + K S+ A+PS H +P P Sbjct: 11 GPSLGWLFAKCCCCFPCRDAYSHSSSENGGKSESVANLQAQPSLNSIHSSPGP 63 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 77,380,222 Number of Sequences: 219361 Number of extensions: 1648599 Number of successful extensions: 5324 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 4940 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5278 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3927707336 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
