>RED_MOUSE (Q9Z1M8) Protein Red (Protein RER) (IK factor) (Cytokine IK)|
          Length = 557

 Score =  130 bits (326), Expect = 3e-30
 Identities = 74/171 (43%), Positives = 111/171 (64%), Gaps = 11/171 (6%)
 Frame = +2

Query: 11  NPDYEPTEL----GSFHAVAPPG-ADLRLEDAQKISIEKSKYLGGDLEHTHLVKGLDFAL 175
           N DYE TEL     ++ AV P   AD    + ++  I++SK+LGGD+EHTHLVKGLDFAL
Sbjct: 111 NKDYEETELISTTANYRAVGPTAEADKSAAEKRRQLIQESKFLGGDMEHTHLVKGLDFAL 170

Query: 176 LNKVRSEI-DKKPDAEDGKDAKARETKED----RAVSFRTAIAKSVYQWTVKQQQSMIKA 340
           L KVR+EI  K+ + E+  +   +ETK+D      + F+T + ++VY+   K +    + 
Sbjct: 171 LQKVRAEIASKEKEEEELMEKPQKETKKDEDPENKIEFKTRLGRNVYRMLFKSKS--YER 228

Query: 341 NDMFLPGRMAFIYNMEDG-LNSDIPTTLHRSKADCPVPEEMVTVSVDGSVL 490
           N++FLPGRMA++ +++D   ++DIPTTL RSKADCP  E   T++ +  V+
Sbjct: 229 NELFLPGRMAYVVDLDDEYADTDIPTTLIRSKADCPTMEAQTTLTTNDIVI 279

>RED_HUMAN (Q13123) Protein Red (Protein RER) (IK factor) (Cytokine IK)|
          Length = 557

 Score =  127 bits (320), Expect = 1e-29
 Identities = 74/171 (43%), Positives = 109/171 (63%), Gaps = 11/171 (6%)
 Frame = +2

Query: 11  NPDYEPTEL----GSFHAVAPPG-ADLRLEDAQKISIEKSKYLGGDLEHTHLVKGLDFAL 175
           N DYE TEL     ++ AV P   AD    + ++  I++SK+LGGD+EHTHLVKGLDFAL
Sbjct: 111 NKDYEETELISTTANYRAVGPTAEADKSAAEKRRQLIQESKFLGGDMEHTHLVKGLDFAL 170

Query: 176 LNKVRSEI-DKKPDAEDGKDAKARETKED----RAVSFRTAIAKSVYQWTVKQQQSMIKA 340
           L KVR EI  K  + E+  +   +ETK+D      + F+T + ++VY+   K +    + 
Sbjct: 171 LQKVRLEIASKDKEEEELMEKPQKETKKDEDPENKIEFKTRLGRNVYRMLFKSK--AYER 228

Query: 341 NDMFLPGRMAFIYNMEDG-LNSDIPTTLHRSKADCPVPEEMVTVSVDGSVL 490
           N++FLPGRMA++ +++D   ++DIPTTL RSKADCP  E   T++ +  V+
Sbjct: 229 NELFLPGRMAYVVDLDDEYADTDIPTTLIRSKADCPTMEAQTTLTTNDIVI 279

>YK13_CAEEL (P34337) Putative tyrosine-protein phosphatase C15H7.3 (EC|
           3.1.3.48)
          Length = 398

 Score = 33.9 bits (76), Expect = 0.24
 Identities = 21/95 (22%), Positives = 42/95 (44%), Gaps = 7/95 (7%)
 Frame = +2

Query: 218 EDGKDAKARETKEDRAVSFRTAIAKSVYQWTVKQQQSMIKANDMFLPGRMAFIYNMEDGL 397
           ++ KD K  E KE+R    +  + +    W+ ++    + AN  F    +   +   D  
Sbjct: 81  DEKKDDKKEEKKEERKEEKKEEVKEP---WSEEEPAKRMVANGFFTTTNVGGTFKQTDNF 137

Query: 398 NSDIPT------TLHRSKA-DCPVPEEMVTVSVDG 481
            + + +       +H+ +A DCP+PEE +    +G
Sbjct: 138 KTPMDSCPSFKNNMHKIRAPDCPIPEEKLVKLTNG 172

>TAL2_STRCO (Q9XAC0) Transaldolase 2 (EC 2.2.1.2)|
          Length = 372

 Score = 32.7 bits (73), Expect = 0.54
 Identities = 21/59 (35%), Positives = 32/59 (54%)
 Frame = +2

Query: 77  RLEDAQKISIEKSKYLGGDLEHTHLVKGLDFALLNKVRSEIDKKPDAEDGKDAKARETK 253
           ++ DA    +EK+K  G DL   H V       +++V +EIDK+ DA    +AKA+  K
Sbjct: 174 KVMDAFLTGLEKAKERGLDLSQIHSVASF---FVSRVDTEIDKRIDALGTDEAKAQRGK 229

>TAL2_STRAW (Q829U5) Transaldolase 2 (EC 2.2.1.2)|
          Length = 372

 Score = 32.0 bits (71), Expect = 0.93
 Identities = 21/56 (37%), Positives = 29/56 (51%)
 Frame = +2

Query: 86  DAQKISIEKSKYLGGDLEHTHLVKGLDFALLNKVRSEIDKKPDAEDGKDAKARETK 253
           DA    +EK+K  G DL   H V       +++V +EIDK+ DA    +AKA   K
Sbjct: 177 DAYLAGLEKAKERGLDLSKIHSVASF---FVSRVDTEIDKRIDALGTPEAKAARGK 229

>BAGS_BOMMO (Q9BLJ6) BAG domain-containing protein Samui|
          Length = 677

 Score = 32.0 bits (71), Expect = 0.93
 Identities = 23/68 (33%), Positives = 29/68 (42%)
 Frame = +2

Query: 59  PPGADLRLEDAQKISIEKSKYLGGDLEHTHLVKGLDFALLNKVRSEIDKKPDAEDGKDAK 238
           PP AD R ED        +K  GGD E     K        KV   + K+  ++D KDA 
Sbjct: 588 PPAADTRPED--------NKSTGGDAEKKEDKKSTP----KKVTKTVKKRDKSKDKKDAP 635

Query: 239 ARETKEDR 262
               KED+
Sbjct: 636 KDSNKEDK 643

>UVRC_ZYMMO (Q5NPR4) UvrABC system protein C (Protein uvrC) (Excinuclease ABC|
           subunit C)
          Length = 664

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 10/67 (14%)
 Frame = +2

Query: 5   RXNPDYEPTEL----------GSFHAVAPPGADLRLEDAQKISIEKSKYLGGDLEHTHLV 154
           R +PD+  +E           G  HAV    A+  + D   + I K        EH HLV
Sbjct: 505 RSDPDHSSSEWPDLLLIDGGKGQVHAVKDILAEQGISDIAIVGISKGPDRNAGREHFHLV 564

Query: 155 KGLDFAL 175
            G ++AL
Sbjct: 565 DGSEYAL 571

>ENO_KLULA (Q70CP7) Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase)|
           (2-phospho-D-glycerate hydro-lyase)
          Length = 437

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
 Frame = +2

Query: 5   RXNPDYE---PTELGSFHAVAPPGADLRLEDAQKI-SIEKSKYLG-GDLEHTHLVKGLDF 169
           R NP  E    TE G+F ++ P GA   + +A ++   +KSK+LG G L     V  +  
Sbjct: 15  RGNPTVEVELTTEKGTFRSIVPSGASTGVHEALELRDGDKSKWLGKGVLTAVSNVNNIIA 74

Query: 170 ALLNKVRSEIDKKPDAED 223
             L K   ++  +   +D
Sbjct: 75  PALVKANVDVTNQQQVDD 92

>GSTF_HYOMU (P46423) Glutathione S-transferase (EC 2.5.1.18) (GST class-phi)|
           (25 kDa auxin-binding protein)
          Length = 212

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
 Frame = +2

Query: 86  DAQKISIEKSKYLGGD---LEHTHLVKGLDFALLNKVRSEIDKKP 211
           D  +  ++ SKYLGGD   L   H    +++ +  KV+S  D +P
Sbjct: 145 DVYESRLKDSKYLGGDSFTLADLHHAPAMNYLMGTKVKSLFDSRP 189

>KLDC2_RAT (Q3KRE6) Kelch domain-containing protein 2|
          Length = 406

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 20/87 (22%), Positives = 35/87 (40%), Gaps = 6/87 (6%)
 Frame = +2

Query: 200 DKKPDAEDGKDAKARETKEDRAVSFRTAIAKSVYQWTVKQQQSMIKANDMFLPGRMAFIY 379
           D    A +G +A       +R+     +  + ++ W   +   +    D +LP    +IY
Sbjct: 12  DMPGPAFEGYEAMELACPAERSGHVAVSDGRHMFVWGGYKSNQVRGLYDFYLPREELWIY 71

Query: 380 NMEDG------LNSDIPTTLHRSKADC 442
           NME G         D+P ++  S A C
Sbjct: 72  NMETGRWKKINTEGDVPPSMSGSCAVC 98

>SMRC1_HUMAN (Q92922) SWI/SNF-related matrix-associated actin-dependent|
           regulator of chromatin subfamily C member 1 (SWI/SNF
           complex 155 kDa subunit) (BRG1-associated factor 155)
          Length = 1105

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = +2

Query: 179 NKVRSEIDKKPDAEDGKDAKARETKEDRAVS 271
           NKV +E D+   A+DG++ K  E ++D  VS
Sbjct: 795 NKVENETDEGDKAQDGENEKNSEKEQDSEVS 825

>GSTF1_TOBAC (P30109) Glutathione S-transferase PARB (EC 2.5.1.18) (GST|
           class-phi)
          Length = 213

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
 Frame = +2

Query: 86  DAQKISIEKSKYLGGD---LEHTHLVKGLDFALLNKVRSEIDKKP 211
           D  +  + +SKYLGGD   L   H +  + + + +KV+   D +P
Sbjct: 145 DIYETQLAESKYLGGDSFTLVDLHHIPNIYYLMSSKVKEVFDSRP 189

>HMO1_YEAST (Q03973) High mobility group protein 1 (High spontaneous|
           mutagenesis protein 2)
          Length = 246

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 11/73 (15%)
 Frame = +2

Query: 71  DLRLEDAQKISIEKSKYLGG---------DLEH--THLVKGLDFALLNKVRSEIDKKPDA 217
           ++ LE+ Q+   EKSKYL            LE+  TH    + F+L +     ++K+P  
Sbjct: 165 NVELENYQR---EKSKYLEAKKNGTLPPASLENGPTHAPVPIPFSLQHAAEPPVEKRPHD 221

Query: 218 EDGKDAKARETKE 256
           +DG   K ++ K+
Sbjct: 222 DDGSSEKKKKKKK 234

>Y849_METTH (O26937) Hypothetical protein MTH849|
          Length = 403

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = +2

Query: 125 GGDLEHTHLVKGLDFALLNKVRSEIDKKPDAEDGKDAKARETKEDRAV 268
           GG L    L + +D A +N V S +DK+ +    KD K R + +   +
Sbjct: 41  GGSLIQIQLERPVDAATMNTVTSVLDKRLNIFGVKDVKVRASGDQNVI 88

>ENO_RHORB (Q870B9) Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase)|
           (2-phospho-D-glycerate hydro-lyase) (Allergen Rho m 1)
          Length = 439

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
 Frame = +2

Query: 5   RXNPDYE---PTELGSFHAVAPPGADLRLEDAQKI-SIEKSKYLG 127
           R NP  E    TE G+F ++ P GA   + +A ++   +KSK+LG
Sbjct: 15  RGNPTVEVELTTEKGTFRSIVPSGASTGVHEALELRDGDKSKWLG 59


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,923,875
Number of Sequences: 219361
Number of extensions: 1417755
Number of successful extensions: 4040
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3942
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4034
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3478785780
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)