ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal16f21 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF161719.1|AF161719 Triticum aestivum vacuolar targeting receptor bp-80 mRNA, complete cds Length = 2293 Score = 763 bits (385), Expect = 0.0 Identities = 411/419 (98%), Gaps = 1/419 (0%) Strand = Plus / Plus Query: 1 ggcctgccgcantacgggggcaccttgcaaggctgggtcgtctaccccaaggcacaacag 60 ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 208 ggcctgccgcagtacgggggcaccttgcaaggctgggtcgtctaccccaagg-acaacag 266 Query: 61 gcaggcctgcaaggagttcgacgtctccttcaagggacacaagtcgggagcccgccccaa 120 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 267 gcaggcctgcaaggagttcgacgtctccttcaagggccacaagtcgggagcccgccccaa 326 Query: 121 cttcgtcctcatcgaccgcggagaatgctttttcacaacaaaggcatggaatgcgcaact 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 327 cttcgtcctcatcgaccgcggagaatgctttttcacaacaaaggcatggaatgcacaact 386 Query: 181 tgctggagctgcagcaattctcgttgtggatagcaaggacgagcctttgatcacaatgga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 387 tgctggagctgcagcaattctcgttgtggatagcaaggacgagcctttgatcacaatgga 446 Query: 241 caacccagaagatactggcacgaagcacttagaaaatatcactattccatctgtgctgat 300 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 447 caacccagaagatactggcacgaagcacttagaaaatatcactattccatcagtgctgat 506 Query: 301 aacaaagaaattgggcgaggaccttaagaaatctgctgaaaatggtgacatggttagtgt 360 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 507 aacaaagaaactgggcgaggaccttaagaaatctgctgaaaatggtgacatggttagtgt 566 Query: 361 cctcctggattggagggaatcccttccccatcctgatgagcgtgtanagtatgaattct 419 ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| Sbjct: 567 cctcctggattggagggaatcccttccccatcccgatgagcgtgtagagtatgaattct 625
>dbj|AK121413.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023133A05, full insert sequence Length = 2546 Score = 270 bits (136), Expect = 3e-69 Identities = 264/307 (85%) Strand = Plus / Plus Query: 113 cgccccaacttcgtcctcatcgaccgcggagaatgctttttcacaacaaaggcatggaat 172 ||||| || ||||| ||||||||||| ||| | |||| ||||||||| |||||||||||| Sbjct: 567 cgcccgaagttcgtgctcatcgaccgtggacagtgctatttcacaacgaaggcatggaat 626 Query: 173 gcgcaacttgctggagctgcagcaattctcgttgtggatagcaaggacgagcctttgatc 232 || ||| |||||| ||||||||| |||| ||||||||| |||| |||||||| ||| Sbjct: 627 gcacaaaatgctggggctgcagcagttcttgttgtggatgacaagtcggagcctttaatc 686 Query: 233 acaatggacaacccagaagatactggcacgaagcacttagaaaatatcactattccatct 292 |||||||| |||||||| ||| |||| || ||||| | ||||| ||||||||||| ||| Sbjct: 687 acaatggataacccagatgatgctggaacagagcaccttgaaaacatcactattccctct 746 Query: 293 gtgctgataacaaagaaattgggcgaggaccttaagaaatctgctgaaaatggtgacatg 352 ||||| ||||| |||||||||||||| ||||| || |||||||||||||||||||| ||| Sbjct: 747 gtgcttataacgaagaaattgggcgatgacctaaaaaaatctgctgaaaatggtgatatg 806 Query: 353 gttagtgtcctcctggattggagggaatcccttccccatcctgatgagcgtgtanagtat 412 ||||| ||||| ||||| ||||| ||||| ||||| |||||||||||||||||| ||||| Sbjct: 807 gttagcgtccttctggactggagagaatctcttccacatcctgatgagcgtgtagagtat 866 Query: 413 gaattct 419 ||||||| Sbjct: 867 gaattct 873
>dbj|AK111847.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023146N11, full insert sequence Length = 1579 Score = 270 bits (136), Expect = 3e-69 Identities = 264/307 (85%) Strand = Plus / Plus Query: 113 cgccccaacttcgtcctcatcgaccgcggagaatgctttttcacaacaaaggcatggaat 172 ||||| || ||||| ||||||||||| ||| | |||| ||||||||| |||||||||||| Sbjct: 475 cgcccgaagttcgtgctcatcgaccgtggacagtgctatttcacaacgaaggcatggaat 534 Query: 173 gcgcaacttgctggagctgcagcaattctcgttgtggatagcaaggacgagcctttgatc 232 || ||| |||||| ||||||||| |||| ||||||||| |||| |||||||| ||| Sbjct: 535 gcacaaaatgctggggctgcagcagttcttgttgtggatgacaagtcggagcctttaatc 594 Query: 233 acaatggacaacccagaagatactggcacgaagcacttagaaaatatcactattccatct 292 |||||||| |||||||| ||| |||| || ||||| | ||||| ||||||||||| ||| Sbjct: 595 acaatggataacccagatgatgctggaacagagcaccttgaaaacatcactattccctct 654 Query: 293 gtgctgataacaaagaaattgggcgaggaccttaagaaatctgctgaaaatggtgacatg 352 ||||| ||||| |||||||||||||| ||||| || |||||||||||||||||||| ||| Sbjct: 655 gtgcttataacgaagaaattgggcgatgacctaaaaaaatctgctgaaaatggtgatatg 714 Query: 353 gttagtgtcctcctggattggagggaatcccttccccatcctgatgagcgtgtanagtat 412 ||||| ||||| ||||| ||||| ||||| ||||| |||||||||||||||||| ||||| Sbjct: 715 gttagcgtccttctggactggagagaatctcttccacatcctgatgagcgtgtagagtat 774 Query: 413 gaattct 419 ||||||| Sbjct: 775 gaattct 781
>dbj|AK111509.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001G14, full insert sequence Length = 2546 Score = 270 bits (136), Expect = 3e-69 Identities = 264/307 (85%) Strand = Plus / Plus Query: 113 cgccccaacttcgtcctcatcgaccgcggagaatgctttttcacaacaaaggcatggaat 172 ||||| || ||||| ||||||||||| ||| | |||| ||||||||| |||||||||||| Sbjct: 567 cgcccgaagttcgtgctcatcgaccgtggacagtgctatttcacaacgaaggcatggaat 626 Query: 173 gcgcaacttgctggagctgcagcaattctcgttgtggatagcaaggacgagcctttgatc 232 || ||| |||||| ||||||||| |||| ||||||||| |||| |||||||| ||| Sbjct: 627 gcacaaaatgctggggctgcagcagttcttgttgtggatgacaagtcggagcctttaatc 686 Query: 233 acaatggacaacccagaagatactggcacgaagcacttagaaaatatcactattccatct 292 |||||||| |||||||| ||| |||| || ||||| | ||||| ||||||||||| ||| Sbjct: 687 acaatggataacccagatgatgctggaacagagcaccttgaaaacatcactattccctct 746 Query: 293 gtgctgataacaaagaaattgggcgaggaccttaagaaatctgctgaaaatggtgacatg 352 ||||| ||||| |||||||||||||| ||||| || |||||||||||||||||||| ||| Sbjct: 747 gtgcttataacgaagaaattgggcgatgacctaaaaaaatctgctgaaaatggtgatatg 806 Query: 353 gttagtgtcctcctggattggagggaatcccttccccatcctgatgagcgtgtanagtat 412 ||||| ||||| ||||| ||||| ||||| ||||| |||||||||||||||||| ||||| Sbjct: 807 gttagcgtccttctggactggagagaatctcttccacatcctgatgagcgtgtagagtat 866 Query: 413 gaattct 419 ||||||| Sbjct: 867 gaattct 873
>dbj|AK098846.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000C17, full insert sequence Length = 2527 Score = 270 bits (136), Expect = 3e-69 Identities = 264/307 (85%) Strand = Plus / Plus Query: 113 cgccccaacttcgtcctcatcgaccgcggagaatgctttttcacaacaaaggcatggaat 172 ||||| || ||||| ||||||||||| ||| | |||| ||||||||| |||||||||||| Sbjct: 519 cgcccgaagttcgtgctcatcgaccgtggacagtgctatttcacaacgaaggcatggaat 578 Query: 173 gcgcaacttgctggagctgcagcaattctcgttgtggatagcaaggacgagcctttgatc 232 || ||| |||||| ||||||||| |||| ||||||||| |||| |||||||| ||| Sbjct: 579 gcacaaaatgctggggctgcagcagttcttgttgtggatgacaagtcggagcctttaatc 638 Query: 233 acaatggacaacccagaagatactggcacgaagcacttagaaaatatcactattccatct 292 |||||||| |||||||| ||| |||| || ||||| | ||||| ||||||||||| ||| Sbjct: 639 acaatggataacccagatgatgctggaacagagcaccttgaaaacatcactattccctct 698 Query: 293 gtgctgataacaaagaaattgggcgaggaccttaagaaatctgctgaaaatggtgacatg 352 ||||| ||||| |||||||||||||| ||||| || |||||||||||||||||||| ||| Sbjct: 699 gtgcttataacgaagaaattgggcgatgacctaaaaaaatctgctgaaaatggtgatatg 758 Query: 353 gttagtgtcctcctggattggagggaatcccttccccatcctgatgagcgtgtanagtat 412 ||||| ||||| ||||| ||||| ||||| ||||| |||||||||||||||||| ||||| Sbjct: 759 gttagcgtccttctggactggagagaatctcttccacatcctgatgagcgtgtagagtat 818 Query: 413 gaattct 419 ||||||| Sbjct: 819 gaattct 825
>dbj|AK098891.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001M02, full insert sequence Length = 2508 Score = 262 bits (132), Expect = 8e-67 Identities = 263/307 (85%) Strand = Plus / Plus Query: 113 cgccccaacttcgtcctcatcgaccgcggagaatgctttttcacaacaaaggcatggaat 172 ||||| || ||||| ||||||||||| ||| | |||| ||||||||| |||||||||||| Sbjct: 530 cgcccgaagttcgtgctcatcgaccgtggacagtgctatttcacaacgaaggcatggaat 589 Query: 173 gcgcaacttgctggagctgcagcaattctcgttgtggatagcaaggacgagcctttgatc 232 || || |||||| ||||||||| |||| ||||||||| |||| |||||||| ||| Sbjct: 590 gcacagaatgctggggctgcagcagttcttgttgtggatgacaagtcggagcctttaatc 649 Query: 233 acaatggacaacccagaagatactggcacgaagcacttagaaaatatcactattccatct 292 |||||||| |||||||| ||| |||| || ||||| | ||||| ||||||||||| ||| Sbjct: 650 acaatggataacccagatgatgctggaacagagcaccttgaaaacatcactattccctct 709 Query: 293 gtgctgataacaaagaaattgggcgaggaccttaagaaatctgctgaaaatggtgacatg 352 ||||| ||||| |||||||||||||| ||||| || |||||||||||||||||||| ||| Sbjct: 710 gtgcttataacgaagaaattgggcgatgacctaaaaaaatctgctgaaaatggtgatatg 769 Query: 353 gttagtgtcctcctggattggagggaatcccttccccatcctgatgagcgtgtanagtat 412 ||||| ||||| ||||| ||||| ||||| ||||| |||||||||||||||||| ||||| Sbjct: 770 gttagcgtccttctggactggagagaatctcttccacatcctgatgagcgtgtagagtat 829 Query: 413 gaattct 419 ||||||| Sbjct: 830 gaattct 836
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 252 bits (127), Expect = 8e-64 Identities = 237/274 (86%) Strand = Plus / Plus Query: 146 tgctttttcacaacaaaggcatggaatgcgcaacttgctggagctgcagcaattctcgtt 205 |||| ||||||||| |||||||||||||| ||| |||||| ||||||||| |||| ||| Sbjct: 12377057 tgctatttcacaacgaaggcatggaatgcacaaaatgctggggctgcagcagttcttgtt 12377116 Query: 206 gtggatagcaaggacgagcctttgatcacaatggacaacccagaagatactggcacgaag 265 |||||| |||| |||||||| ||||||||||| |||||||| ||| |||| || || Sbjct: 12377117 gtggatgacaagtcggagcctttaatcacaatggataacccagatgatgctggaacagag 12377176 Query: 266 cacttagaaaatatcactattccatctgtgctgataacaaagaaattgggcgaggacctt 325 ||| | ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 12377177 caccttgaaaacatcactattccctctgtgcttataacgaagaaattgggcgatgaccta 12377236 Query: 326 aagaaatctgctgaaaatggtgacatggttagtgtcctcctggattggagggaatccctt 385 || |||||||||||||||||||| |||||||| ||||| ||||| ||||| ||||| ||| Sbjct: 12377237 aaaaaatctgctgaaaatggtgatatggttagcgtccttctggactggagagaatctctt 12377296 Query: 386 ccccatcctgatgagcgtgtanagtatgaattct 419 || |||||||||||||||||| |||||||||||| Sbjct: 12377297 ccacatcctgatgagcgtgtagagtatgaattct 12377330
>gb|AC125496.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0098H14, complete sequence Length = 132560 Score = 252 bits (127), Expect = 8e-64 Identities = 237/274 (86%) Strand = Plus / Plus Query: 146 tgctttttcacaacaaaggcatggaatgcgcaacttgctggagctgcagcaattctcgtt 205 |||| ||||||||| |||||||||||||| ||| |||||| ||||||||| |||| ||| Sbjct: 36075 tgctatttcacaacgaaggcatggaatgcacaaaatgctggggctgcagcagttcttgtt 36134 Query: 206 gtggatagcaaggacgagcctttgatcacaatggacaacccagaagatactggcacgaag 265 |||||| |||| |||||||| ||||||||||| |||||||| ||| |||| || || Sbjct: 36135 gtggatgacaagtcggagcctttaatcacaatggataacccagatgatgctggaacagag 36194 Query: 266 cacttagaaaatatcactattccatctgtgctgataacaaagaaattgggcgaggacctt 325 ||| | ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 36195 caccttgaaaacatcactattccctctgtgcttataacgaagaaattgggcgatgaccta 36254 Query: 326 aagaaatctgctgaaaatggtgacatggttagtgtcctcctggattggagggaatccctt 385 || |||||||||||||||||||| |||||||| ||||| ||||| ||||| ||||| ||| Sbjct: 36255 aaaaaatctgctgaaaatggtgatatggttagcgtccttctggactggagagaatctctt 36314 Query: 386 ccccatcctgatgagcgtgtanagtatgaattct 419 || |||||||||||||||||| |||||||||||| Sbjct: 36315 ccacatcctgatgagcgtgtagagtatgaattct 36348
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 252 bits (127), Expect = 8e-64 Identities = 237/274 (86%) Strand = Plus / Plus Query: 146 tgctttttcacaacaaaggcatggaatgcgcaacttgctggagctgcagcaattctcgtt 205 |||| ||||||||| |||||||||||||| ||| |||||| ||||||||| |||| ||| Sbjct: 12373820 tgctatttcacaacgaaggcatggaatgcacaaaatgctggggctgcagcagttcttgtt 12373879 Query: 206 gtggatagcaaggacgagcctttgatcacaatggacaacccagaagatactggcacgaag 265 |||||| |||| |||||||| ||||||||||| |||||||| ||| |||| || || Sbjct: 12373880 gtggatgacaagtcggagcctttaatcacaatggataacccagatgatgctggaacagag 12373939 Query: 266 cacttagaaaatatcactattccatctgtgctgataacaaagaaattgggcgaggacctt 325 ||| | ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 12373940 caccttgaaaacatcactattccctctgtgcttataacgaagaaattgggcgatgaccta 12373999 Query: 326 aagaaatctgctgaaaatggtgacatggttagtgtcctcctggattggagggaatccctt 385 || |||||||||||||||||||| |||||||| ||||| ||||| ||||| ||||| ||| Sbjct: 12374000 aaaaaatctgctgaaaatggtgatatggttagcgtccttctggactggagagaatctctt 12374059 Query: 386 ccccatcctgatgagcgtgtanagtatgaattct 419 || |||||||||||||||||| |||||||||||| Sbjct: 12374060 ccacatcctgatgagcgtgtagagtatgaattct 12374093
>gb|AY105262.1| Zea mays PCO087823 mRNA sequence Length = 1974 Score = 155 bits (78), Expect = 1e-34 Identities = 199/239 (83%), Gaps = 3/239 (1%) Strand = Plus / Plus Query: 181 tgctggagctgcagcaattctcgttgtggatagcaaggacgagcctttgatcacaatgga 240 |||||||||||| ||| |||| ||||||||| |||| || ||| | ||||||||||| Sbjct: 6 tgctggagctgctgcagttcttgttgtggatgacaagtcggaacctctaatcacaatgga 65 Query: 241 caacccagaagatactggcacgaagcacttagaaaatatcactattccatctgtgctgat 300 |||||||||||| |||| ||||| ||||||| ||||||||||| || ||||| || Sbjct: 66 caacccagaagaa---ggcaaagagcacctagaaaacatcactattccctcagtgcttat 122 Query: 301 aacaaagaaattgggcgaggaccttaagaaatctgctgaaaatggtgacatggttagtgt 360 ||||||||||||||| || ||||||||||||| || |||||||| || ||| | || || Sbjct: 123 aacaaagaaattgggggaaaaccttaagaaatccgcggaaaatggcgatatgctcagcgt 182 Query: 361 cctcctggattggagggaatcccttccccatcctgatgagcgtgtanagtatgaattct 419 || ||||| ||||| ||||||||||||||||| |||||||||||| ||||||| |||| Sbjct: 183 tcttctggactggagagaatcccttccccatcccgatgagcgtgtagagtatgagttct 241
>ref|XM_479541.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2450 Score = 93.7 bits (47), Expect = 4e-16 Identities = 73/82 (89%) Strand = Plus / Plus Query: 338 gaaaatggtgacatggttagtgtcctcctggattggagggaatcccttccccatcctgat 397 ||||| ||||| ||||| | |||||| ||||||||||||||||| || || ||||||||| Sbjct: 689 gaaaacggtgatatggtcaatgtccttctggattggagggaatctctccctcatcctgat 748 Query: 398 gagcgtgtanagtatgaattct 419 ||||||||| |||||||||||| Sbjct: 749 gagcgtgtagagtatgaattct 770 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 115 ccccaacttcgtcctcatcgaccgcggagaatgctttttcacaacaaaggcatggaatgc 174 ||||| |||| ||||| |||| |||||||| |||| ||||||||||||| ||||||||| Sbjct: 466 ccccatcttcctcctcgtcgatcgcggagactgctacttcacaacaaagggatggaatgc 525 Query: 175 gcaacttgctggagctgcagc 195 ||| |||||||||||||| Sbjct: 526 tcaaaccgctggagctgcagc 546 Score = 48.1 bits (24), Expect = 0.023 Identities = 57/67 (85%), Gaps = 1/67 (1%) Strand = Plus / Plus Query: 5 tgccgcantacgggggcaccttgcaaggctgggtcgtctaccccaaggcacaacaggcag 64 ||||||| |||||||||||| |||| || ||||||||||||||||| ||||| | || Sbjct: 351 tgccgcagtacgggggcaccatgcacggggtcgtcgtctaccccaaggc-caacaagaag 409 Query: 65 gcctgca 71 ||||||| Sbjct: 410 gcctgca 416
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 93.7 bits (47), Expect = 4e-16 Identities = 73/82 (89%) Strand = Plus / Minus Query: 338 gaaaatggtgacatggttagtgtcctcctggattggagggaatcccttccccatcctgat 397 ||||| ||||| ||||| | |||||| ||||||||||||||||| || || ||||||||| Sbjct: 28764293 gaaaacggtgatatggtcaatgtccttctggattggagggaatctctccctcatcctgat 28764234 Query: 398 gagcgtgtanagtatgaattct 419 ||||||||| |||||||||||| Sbjct: 28764233 gagcgtgtagagtatgaattct 28764212 Score = 48.1 bits (24), Expect = 0.023 Identities = 57/67 (85%), Gaps = 1/67 (1%) Strand = Plus / Minus Query: 5 tgccgcantacgggggcaccttgcaaggctgggtcgtctaccccaaggcacaacaggcag 64 ||||||| |||||||||||| |||| || ||||||||||||||||| ||||| | || Sbjct: 28765843 tgccgcagtacgggggcaccatgcacggggtcgtcgtctaccccaaggc-caacaagaag 28765785 Query: 65 gcctgca 71 ||||||| Sbjct: 28765784 gcctgca 28765778 Score = 48.1 bits (24), Expect = 0.023 Identities = 39/44 (88%) Strand = Plus / Minus Query: 152 ttcacaacaaaggcatggaatgcgcaacttgctggagctgcagc 195 ||||||||||||| ||||||||| ||| |||||||||||||| Sbjct: 28764479 ttcacaacaaagggatggaatgctcaaaccgctggagctgcagc 28764436
>dbj|AP005243.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1205_F02 Length = 112862 Score = 93.7 bits (47), Expect = 4e-16 Identities = 73/82 (89%) Strand = Plus / Minus Query: 338 gaaaatggtgacatggttagtgtcctcctggattggagggaatcccttccccatcctgat 397 ||||| ||||| ||||| | |||||| ||||||||||||||||| || || ||||||||| Sbjct: 71854 gaaaacggtgatatggtcaatgtccttctggattggagggaatctctccctcatcctgat 71795 Query: 398 gagcgtgtanagtatgaattct 419 ||||||||| |||||||||||| Sbjct: 71794 gagcgtgtagagtatgaattct 71773 Score = 48.1 bits (24), Expect = 0.023 Identities = 57/67 (85%), Gaps = 1/67 (1%) Strand = Plus / Minus Query: 5 tgccgcantacgggggcaccttgcaaggctgggtcgtctaccccaaggcacaacaggcag 64 ||||||| |||||||||||| |||| || ||||||||||||||||| ||||| | || Sbjct: 73404 tgccgcagtacgggggcaccatgcacggggtcgtcgtctaccccaaggc-caacaagaag 73346 Query: 65 gcctgca 71 ||||||| Sbjct: 73345 gcctgca 73339 Score = 48.1 bits (24), Expect = 0.023 Identities = 39/44 (88%) Strand = Plus / Minus Query: 152 ttcacaacaaaggcatggaatgcgcaacttgctggagctgcagc 195 ||||||||||||| ||||||||| ||| |||||||||||||| Sbjct: 72040 ttcacaacaaagggatggaatgctcaaaccgctggagctgcagc 71997
>dbj|AP005099.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0008J01 Length = 159900 Score = 93.7 bits (47), Expect = 4e-16 Identities = 73/82 (89%) Strand = Plus / Minus Query: 338 gaaaatggtgacatggttagtgtcctcctggattggagggaatcccttccccatcctgat 397 ||||| ||||| ||||| | |||||| ||||||||||||||||| || || ||||||||| Sbjct: 21979 gaaaacggtgatatggtcaatgtccttctggattggagggaatctctccctcatcctgat 21920 Query: 398 gagcgtgtanagtatgaattct 419 ||||||||| |||||||||||| Sbjct: 21919 gagcgtgtagagtatgaattct 21898 Score = 48.1 bits (24), Expect = 0.023 Identities = 57/67 (85%), Gaps = 1/67 (1%) Strand = Plus / Minus Query: 5 tgccgcantacgggggcaccttgcaaggctgggtcgtctaccccaaggcacaacaggcag 64 ||||||| |||||||||||| |||| || ||||||||||||||||| ||||| | || Sbjct: 23529 tgccgcagtacgggggcaccatgcacggggtcgtcgtctaccccaaggc-caacaagaag 23471 Query: 65 gcctgca 71 ||||||| Sbjct: 23470 gcctgca 23464 Score = 48.1 bits (24), Expect = 0.023 Identities = 39/44 (88%) Strand = Plus / Minus Query: 152 ttcacaacaaaggcatggaatgcgcaacttgctggagctgcagc 195 ||||||||||||| ||||||||| ||| |||||||||||||| Sbjct: 22165 ttcacaacaaagggatggaatgctcaaaccgctggagctgcagc 22122
>dbj|AK072667.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023134F15, full insert sequence Length = 2450 Score = 93.7 bits (47), Expect = 4e-16 Identities = 73/82 (89%) Strand = Plus / Plus Query: 338 gaaaatggtgacatggttagtgtcctcctggattggagggaatcccttccccatcctgat 397 ||||| ||||| ||||| | |||||| ||||||||||||||||| || || ||||||||| Sbjct: 689 gaaaacggtgatatggtcaatgtccttctggattggagggaatctctccctcatcctgat 748 Query: 398 gagcgtgtanagtatgaattct 419 ||||||||| |||||||||||| Sbjct: 749 gagcgtgtagagtatgaattct 770 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 115 ccccaacttcgtcctcatcgaccgcggagaatgctttttcacaacaaaggcatggaatgc 174 ||||| |||| ||||| |||| |||||||| |||| ||||||||||||| ||||||||| Sbjct: 466 ccccatcttcctcctcgtcgatcgcggagactgctacttcacaacaaagggatggaatgc 525 Query: 175 gcaacttgctggagctgcagc 195 ||| |||||||||||||| Sbjct: 526 tcaaaccgctggagctgcagc 546 Score = 48.1 bits (24), Expect = 0.023 Identities = 57/67 (85%), Gaps = 1/67 (1%) Strand = Plus / Plus Query: 5 tgccgcantacgggggcaccttgcaaggctgggtcgtctaccccaaggcacaacaggcag 64 ||||||| |||||||||||| |||| || ||||||||||||||||| ||||| | || Sbjct: 351 tgccgcagtacgggggcaccatgcacggggtcgtcgtctaccccaaggc-caacaagaag 409 Query: 65 gcctgca 71 ||||||| Sbjct: 410 gcctgca 416
>gb|AY104972.1| Zea mays PCO068557 mRNA sequence Length = 1725 Score = 61.9 bits (31), Expect = 2e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 366 tggattggagggaatcccttccccatcctgatgagcgtgtanagtatgaattct 419 ||||||||||||| |||| ||||||||||| |||||||| |||||||||||| Sbjct: 221 tggattggagggaggccctgccccatcctgacgagcgtgtcgagtatgaattct 274
>gb|AC123514.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0004B05, complete sequence Length = 121223 Score = 60.0 bits (30), Expect = 6e-06 Identities = 65/77 (84%) Strand = Plus / Minus Query: 341 aatggtgacatggttagtgtcctcctggattggagggaatcccttccccatcctgatgag 400 |||||||||||||||| ||| ||||||||||||| ||||| || || ||||||||| Sbjct: 23747 aatggtgacatggttaatgtgaatttggattggagggagtccctgcctcaccctgatgag 23688 Query: 401 cgtgtanagtatgaatt 417 ||||| |||||||||| Sbjct: 23687 cgtgttgagtatgaatt 23671 Score = 44.1 bits (22), Expect = 0.36 Identities = 43/50 (86%) Strand = Plus / Minus Query: 146 tgctttttcacaacaaaggcatggaatgcgcaacttgctggagctgcagc 195 ||||||||||||| |||||||||||||| ||| |||||||| ||||| Sbjct: 23945 tgctttttcacaaagaaggcatggaatgcacaaaacgctggagcagcagc 23896
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 60.0 bits (30), Expect = 6e-06 Identities = 65/77 (84%) Strand = Plus / Minus Query: 341 aatggtgacatggttagtgtcctcctggattggagggaatcccttccccatcctgatgag 400 |||||||||||||||| ||| ||||||||||||| ||||| || || ||||||||| Sbjct: 745454 aatggtgacatggttaatgtgaatttggattggagggagtccctgcctcaccctgatgag 745395 Query: 401 cgtgtanagtatgaatt 417 ||||| |||||||||| Sbjct: 745394 cgtgttgagtatgaatt 745378 Score = 44.1 bits (22), Expect = 0.36 Identities = 43/50 (86%) Strand = Plus / Minus Query: 146 tgctttttcacaacaaaggcatggaatgcgcaacttgctggagctgcagc 195 ||||||||||||| |||||||||||||| ||| |||||||| ||||| Sbjct: 745652 tgctttttcacaaagaaggcatggaatgcacaaaacgctggagcagcagc 745603
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 60.0 bits (30), Expect = 6e-06 Identities = 65/77 (84%) Strand = Plus / Minus Query: 341 aatggtgacatggttagtgtcctcctggattggagggaatcccttccccatcctgatgag 400 |||||||||||||||| ||| ||||||||||||| ||||| || || ||||||||| Sbjct: 745456 aatggtgacatggttaatgtgaatttggattggagggagtccctgcctcaccctgatgag 745397 Query: 401 cgtgtanagtatgaatt 417 ||||| |||||||||| Sbjct: 745396 cgtgttgagtatgaatt 745380 Score = 44.1 bits (22), Expect = 0.36 Identities = 43/50 (86%) Strand = Plus / Minus Query: 146 tgctttttcacaacaaaggcatggaatgcgcaacttgctggagctgcagc 195 ||||||||||||| |||||||||||||| ||| |||||||| ||||| Sbjct: 745654 tgctttttcacaaagaaggcatggaatgcacaaaacgctggagcagcagc 745605
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 52.0 bits (26), Expect = 0.001 Identities = 64/77 (83%) Strand = Plus / Minus Query: 341 aatggtgacatggttagtgtcctcctggattggagggaatcccttccccatcctgatgag 400 |||||||||||||||| ||| ||||||||||||| ||||| || || ||||||||| Sbjct: 785808 aatggtgacatggttaatgtgaatttggattggagggagtccctgcctcaccctgatgag 785749 Query: 401 cgtgtanagtatgaatt 417 ||||| |||| ||||| Sbjct: 785748 cgtgttgagtacgaatt 785732 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 146 tgctttttcacaacaaaggcatggaatgc 174 ||||||||||||| |||||||||||||| Sbjct: 786006 tgctttttcacaaagaaggcatggaatgc 785978
>dbj|AK102691.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033103D10, full insert sequence Length = 2549 Score = 52.0 bits (26), Expect = 0.001 Identities = 64/77 (83%) Strand = Plus / Plus Query: 341 aatggtgacatggttagtgtcctcctggattggagggaatcccttccccatcctgatgag 400 |||||||||||||||| ||| ||||||||||||| ||||| || || ||||||||| Sbjct: 760 aatggtgacatggttaatgtgaatttggattggagggagtccctgcctcaccctgatgag 819 Query: 401 cgtgtanagtatgaatt 417 ||||| |||| ||||| Sbjct: 820 cgtgttgagtacgaatt 836 Score = 48.1 bits (24), Expect = 0.023 Identities = 51/60 (85%) Strand = Plus / Plus Query: 115 ccccaacttcgtcctcatcgaccgcggagaatgctttttcacaacaaaggcatggaatgc 174 ||||| |||| ||||| |||| | ||||| ||||||||||||| |||||||||||||| Sbjct: 531 ccccaccttcctcctcgtcgataggggagattgctttttcacaaagaaggcatggaatgc 590
>dbj|AK066617.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013073B02, full insert sequence Length = 2553 Score = 52.0 bits (26), Expect = 0.001 Identities = 64/77 (83%) Strand = Plus / Plus Query: 341 aatggtgacatggttagtgtcctcctggattggagggaatcccttccccatcctgatgag 400 |||||||||||||||| ||| ||||||||||||| ||||| || || ||||||||| Sbjct: 821 aatggtgacatggttaatgtgaatttggattggagggagtccctgcctcaccctgatgag 880 Query: 401 cgtgtanagtatgaatt 417 ||||| |||| ||||| Sbjct: 881 cgtgttgagtacgaatt 897 Score = 48.1 bits (24), Expect = 0.023 Identities = 51/60 (85%) Strand = Plus / Plus Query: 115 ccccaacttcgtcctcatcgaccgcggagaatgctttttcacaacaaaggcatggaatgc 174 ||||| |||| ||||| |||| | ||||| ||||||||||||| |||||||||||||| Sbjct: 592 ccccaccttcctcctcgtcgataggggagattgctttttcacaaagaaggcatggaatgc 651
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 52.0 bits (26), Expect = 0.001 Identities = 64/77 (83%) Strand = Plus / Minus Query: 341 aatggtgacatggttagtgtcctcctggattggagggaatcccttccccatcctgatgag 400 |||||||||||||||| ||| ||||||||||||| ||||| || || ||||||||| Sbjct: 785808 aatggtgacatggttaatgtgaatttggattggagggagtccctgcctcaccctgatgag 785749 Query: 401 cgtgtanagtatgaatt 417 ||||| |||| ||||| Sbjct: 785748 cgtgttgagtacgaatt 785732 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 146 tgctttttcacaacaaaggcatggaatgc 174 ||||||||||||| |||||||||||||| Sbjct: 786006 tgctttttcacaaagaaggcatggaatgc 785978
>emb|BX842244.3|CNS0B0PN Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBb0006G23 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 12281 Score = 52.0 bits (26), Expect = 0.001 Identities = 64/77 (83%) Strand = Plus / Minus Query: 341 aatggtgacatggttagtgtcctcctggattggagggaatcccttccccatcctgatgag 400 |||||||||||||||| ||| ||||||||||||| ||||| || || ||||||||| Sbjct: 7580 aatggtgacatggttaatgtgaatttggattggagggagtccctgcctcaccctgatgag 7521 Query: 401 cgtgtanagtatgaatt 417 ||||| |||| ||||| Sbjct: 7520 cgtgttgagtacgaatt 7504 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 146 tgctttttcacaacaaaggcatggaatgc 174 ||||||||||||| |||||||||||||| Sbjct: 7778 tgctttttcacaaagaaggcatggaatgc 7750
>ref|NM_115145.1| Arabidopsis thaliana ATELP1 AT3G52850 (ATELP1) mRNA, complete cds Length = 2307 Score = 50.1 bits (25), Expect = 0.006 Identities = 30/32 (93%) Strand = Plus / Plus Query: 384 ttccccatcctgatgagcgtgtanagtatgaa 415 |||| |||||||||||||||||| |||||||| Sbjct: 714 ttccacatcctgatgagcgtgtagagtatgaa 745
>emb|Y07917.1|ATSPOT3PR A.thaliana mRNA for Spot 3 protein Length = 2305 Score = 50.1 bits (25), Expect = 0.006 Identities = 30/32 (93%) Strand = Plus / Plus Query: 384 ttccccatcctgatgagcgtgtanagtatgaa 415 |||| |||||||||||||||||| |||||||| Sbjct: 708 ttccacatcctgatgagcgtgtagagtatgaa 739
>emb|AL132969.2|ATF8J2 Arabidopsis thaliana DNA chromosome 3, BAC clone F8J2 Length = 99814 Score = 50.1 bits (25), Expect = 0.006 Identities = 30/32 (93%) Strand = Plus / Plus Query: 384 ttccccatcctgatgagcgtgtanagtatgaa 415 |||| |||||||||||||||||| |||||||| Sbjct: 12012 ttccacatcctgatgagcgtgtagagtatgaa 12043
>gb|AY048289.1| Arabidopsis thaliana AT3g52850/F8J2_20 mRNA, complete cds Length = 2308 Score = 50.1 bits (25), Expect = 0.006 Identities = 30/32 (93%) Strand = Plus / Plus Query: 384 ttccccatcctgatgagcgtgtanagtatgaa 415 |||| |||||||||||||||||| |||||||| Sbjct: 714 ttccacatcctgatgagcgtgtagagtatgaa 745
>gb|U86700.1|ATU86700 Arabidopsis thaliana EGF receptor like protein mRNA, complete cds Length = 2313 Score = 50.1 bits (25), Expect = 0.006 Identities = 30/32 (93%) Strand = Plus / Plus Query: 384 ttccccatcctgatgagcgtgtanagtatgaa 415 |||| |||||||||||||||||| |||||||| Sbjct: 698 ttccacatcctgatgagcgtgtagagtatgaa 729
>ref|NM_195907.1| Oryza sativa (japonica cultivar-group) putative vacuolar sorting receptor protein (OSJNBb0078C13.14), mRNA Length = 1932 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Plus Query: 115 ccccaacttcgtcctcatcgaccgcgga 142 |||||||||| ||||||||||||||||| Sbjct: 282 ccccaacttcctcctcatcgaccgcgga 309
>gb|AC091666.4| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0078C13, complete sequence Length = 140553 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Plus Query: 115 ccccaacttcgtcctcatcgaccgcgga 142 |||||||||| ||||||||||||||||| Sbjct: 131094 ccccaacttcctcctcatcgaccgcgga 131121
>gb|AC079634.3|AC079634 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0045C13, from Chromosome 10, complete sequence Length = 161250 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Minus Query: 115 ccccaacttcgtcctcatcgaccgcgga 142 |||||||||| ||||||||||||||||| Sbjct: 135340 ccccaacttcctcctcatcgaccgcgga 135313
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Minus Query: 115 ccccaacttcgtcctcatcgaccgcgga 142 |||||||||| ||||||||||||||||| Sbjct: 9902861 ccccaacttcctcctcatcgaccgcgga 9902834
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Minus Query: 115 ccccaacttcgtcctcatcgaccgcgga 142 |||||||||| ||||||||||||||||| Sbjct: 9908900 ccccaacttcctcctcatcgaccgcgga 9908873
>gb|AC008031.6| Trypanosoma brucei chromosome 2 clone RPCI93-25N14, complete sequence Length = 151499 Score = 46.1 bits (23), Expect = 0.091 Identities = 23/23 (100%) Strand = Plus / Plus Query: 174 cgcaacttgctggagctgcagca 196 ||||||||||||||||||||||| Sbjct: 36984 cgcaacttgctggagctgcagca 37006
>gb|AE017150.2| Trypanosoma brucei chromosome 2, complete sequence Length = 1193948 Score = 46.1 bits (23), Expect = 0.091 Identities = 23/23 (100%) Strand = Plus / Minus Query: 174 cgcaacttgctggagctgcagca 196 ||||||||||||||||||||||| Sbjct: 461713 cgcaacttgctggagctgcagca 461691
>ref|XM_946447.1| Trypanosoma brucei TREU927 hypothetical protein (Tb927.2.2370) partial mRNA Length = 4200 Score = 46.1 bits (23), Expect = 0.091 Identities = 23/23 (100%) Strand = Plus / Plus Query: 174 cgcaacttgctggagctgcagca 196 ||||||||||||||||||||||| Sbjct: 3288 cgcaacttgctggagctgcagca 3310
>ref|XM_877365.1| PREDICTED: Bos taurus similar to Nucleoporin SEH1-like (SEC13-like protein), transcript variant 4 (LOC506020), mRNA Length = 3459 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 272 gaaaatatcactattccatctg 293 |||||||||||||||||||||| Sbjct: 1438 gaaaatatcactattccatctg 1459
>ref|XM_877318.1| PREDICTED: Bos taurus similar to Nucleoporin SEH1-like (SEC13-like protein), transcript variant 3 (LOC506020), mRNA Length = 3456 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 272 gaaaatatcactattccatctg 293 |||||||||||||||||||||| Sbjct: 1435 gaaaatatcactattccatctg 1456
>ref|XM_877224.1| PREDICTED: Bos taurus similar to Nucleoporin SEH1-like (SEC13-like protein), transcript variant 2 (LOC506020), mRNA Length = 3174 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 272 gaaaatatcactattccatctg 293 |||||||||||||||||||||| Sbjct: 1153 gaaaatatcactattccatctg 1174
>gb|AC109666.7| Rattus norvegicus 4 BAC CH230-252C14 (Children's Hospital Oakland Research Institute) complete sequence Length = 214386 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 304 aaagaaattgggcgaggacct 324 ||||||||||||||||||||| Sbjct: 65728 aaagaaattgggcgaggacct 65708
>gb|AC135960.14| Pan troglodytes clone rp43-55o12, complete sequence Length = 157430 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 152 ttcacaacaaaggcatggaat 172 ||||||||||||||||||||| Sbjct: 86936 ttcacaacaaaggcatggaat 86916
>gb|AC137066.23| Pan troglodytes clone ptb-31f12, complete sequence Length = 153498 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 152 ttcacaacaaaggcatggaat 172 ||||||||||||||||||||| Sbjct: 149053 ttcacaacaaaggcatggaat 149073
>emb|BX294126.10| Zebrafish DNA sequence from clone DKEYP-35B8 in linkage group 2, complete sequence Length = 179476 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 150 ttttcacaacaaaggcatgga 170 ||||||||||||||||||||| Sbjct: 129884 ttttcacaacaaaggcatgga 129904
>emb|BX000444.11| Zebrafish DNA sequence from clone RP71-31C2 in linkage group 9, complete sequence Length = 128377 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 332 tctgctgaaaatggtgacatg 352 ||||||||||||||||||||| Sbjct: 16502 tctgctgaaaatggtgacatg 16522
>emb|AL935192.10| Zebrafish DNA sequence from clone CH211-252B2, complete sequence Length = 192649 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 150 ttttcacaacaaaggcatgga 170 ||||||||||||||||||||| Sbjct: 103691 ttttcacaacaaaggcatgga 103671
>gb|U79959.1|ATU79959 Arabidopsis thaliana vacuolar sorting receptor homolog mRNA, complete cds Length = 2286 Score = 42.1 bits (21), Expect = 1.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 384 ttccccatcctgatgagcgtgtanagtatgaa 415 |||| |||||||||||||| ||| |||||||| Sbjct: 708 ttccacatcctgatgagcgagtagagtatgaa 739
>ref|XM_635799.1| Dictyostelium discoideum TATA box-binding protein-associated factor, RNA polymerase III, subunit 2 (DDB0231089), partial mRNA Length = 2121 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 325 taagaaatctgctgaaaatg 344 |||||||||||||||||||| Sbjct: 1797 taagaaatctgctgaaaatg 1816
>ref|XM_706280.1| Candida albicans SC5314 hypothetical protein (CaO19.11136), mRNA Length = 450 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 329 aaatctgctgaaaatggtgacatggtta 356 |||||||||||||||||| |||| |||| Sbjct: 32 aaatctgctgaaaatggtaacattgtta 5
>ref|XM_706279.1| Candida albicans SC5314 3-phosphoglycerate kinase (CaO19.11135), mRNA Length = 1254 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 329 aaatctgctgaaaatggtgacatggtta 356 |||||||||||||||||| |||| |||| Sbjct: 1078 aaatctgctgaaaatggtaacattgtta 1105
>ref|XM_706232.1| Candida albicans SC5314 hypothetical protein (CaO19.3652), mRNA Length = 450 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 329 aaatctgctgaaaatggtgacatggtta 356 |||||||||||||||||| |||| |||| Sbjct: 32 aaatctgctgaaaatggtaacattgtta 5
>ref|XM_706231.1| Candida albicans SC5314 3-phosphoglycerate kinase (CaO19.3651), mRNA Length = 1254 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 329 aaatctgctgaaaatggtgacatggtta 356 |||||||||||||||||| |||| |||| Sbjct: 1078 aaatctgctgaaaatggtaacattgtta 1105
>emb|AL590239.7| Human DNA sequence from clone RP11-466D24 on chromosome 6, complete sequence Length = 127316 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 155 acaacaaaggcatggaatgc 174 |||||||||||||||||||| Sbjct: 94981 acaacaaaggcatggaatgc 95000
>emb|AL162721.11| Human DNA sequence from clone RP4-549K21 on chromosome 6, complete sequence Length = 23797 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 ttcacaacaaaggcatggaa 171 |||||||||||||||||||| Sbjct: 21325 ttcacaacaaaggcatggaa 21306
>gb|AC163762.4| Pan troglodytes BAC clone CH251-176O2 from chromosome unknown, complete sequence Length = 161992 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 ttcacaacaaaggcatggaa 171 |||||||||||||||||||| Sbjct: 112700 ttcacaacaaaggcatggaa 112681
>gb|U25180.1|CAU25180 Candida albicans phosphoglycerate kinase (PGK1) gene, complete cds Length = 2061 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 329 aaatctgctgaaaatggtgacatggtta 356 |||||||||||||||||| |||| |||| Sbjct: 1791 aaatctgctgaaaatggtaacattgtta 1818
>emb|AL772340.19| Zebrafish DNA sequence from clone CH211-150G2, complete sequence Length = 174176 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 aatgctttttcacaacaaag 163 |||||||||||||||||||| Sbjct: 131855 aatgctttttcacaacaaag 131836
>gb|AE016830.1| Enterococcus faecalis V583, complete genome Length = 3218031 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 333 ctgctgaaaatggtgacatg 352 |||||||||||||||||||| Sbjct: 691519 ctgctgaaaatggtgacatg 691538
>gb|AC151323.2| Xenopus tropicalis clone ISB-253E6, complete sequence Length = 74805 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 tcccttccccatcctgatga 399 |||||||||||||||||||| Sbjct: 45358 tcccttccccatcctgatga 45377 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 tcccttccccatcctgatga 399 |||||||||||||||||||| Sbjct: 43776 tcccttccccatcctgatga 43757
>dbj|AB006809.1| Cucurbita cv. Kurokawa Amakuri mRNA for PV72, complete cds Length = 2190 Score = 40.1 bits (20), Expect = 5.6 Identities = 31/35 (88%) Strand = Plus / Plus Query: 383 cttccccatcctgatgagcgtgtanagtatgaatt 417 ||||| ||||||||||| ||||| |||||||||| Sbjct: 579 cttccacatcctgatgatcgtgttgagtatgaatt 613 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,386,299 Number of Sequences: 3902068 Number of extensions: 3386299 Number of successful extensions: 72613 Number of sequences better than 10.0: 61 Number of HSP's better than 10.0 without gapping: 61 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 72298 Number of HSP's gapped (non-prelim): 300 length of query: 419 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 397 effective length of database: 17,147,199,772 effective search space: 6807438309484 effective search space used: 6807438309484 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
