ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal16f01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1YEE9_SCHPO (O13825) Hypothetical protein C19A8.09 in chromosome I 53 3e-07
2YOS1_YEAST (Q3E834) Protein YOS1 (YIP one suppressor protein 1) 42 5e-04
3BOI2_YEAST (P39969) Protein BOI2 (Protein BEB1) 29 3.9
4ZBTB4_HUMAN (Q9P1Z0) Zinc finger and BTB domain-containing prote... 29 3.9
5EPL1_CRYNE (Q5K767) Enhancer of polycomb-like protein 1 29 5.2
6Y392_BUCBP (Q89AC2) Hypothetical UPF0004 protein bbp_392 28 6.7
7V2R_PIG (P32307) Vasopressin V2 receptor (Renal-type arginine va... 28 6.7
8YFIH_BACSU (P54724) Hypothetical protein yfiH 28 8.8
9TLR5_MOUSE (Q9JLF7) Toll-like receptor 5 precursor 28 8.8

>YEE9_SCHPO (O13825) Hypothetical protein C19A8.09 in chromosome I|
          Length = 81

 Score = 53.1 bits (126), Expect = 3e-07
 Identities = 30/66 (45%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
 Frame = +1

Query: 130 NSLAILNEDRFLGPRGWSMSEVSGNGQTK-SLKGQIVGLIYATQ-FLRMPLIALNVLIIV 303
           N++AIL+EDRFLG  GWS S   G G  + ++K +I+ LI A +  +  PLIA+N ++IV
Sbjct: 16  NAVAILSEDRFLGRIGWSQSAALGFGDRQDTIKSRILHLIRAIRTVMTFPLIAINTIVIV 75

Query: 304 VKMVSG 321
             +V G
Sbjct: 76  YNLVLG 81



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>YOS1_YEAST (Q3E834) Protein YOS1 (YIP one suppressor protein 1)|
          Length = 85

 Score = 42.4 bits (98), Expect = 5e-04
 Identities = 28/69 (40%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
 Frame = +1

Query: 130 NSLAILNEDRFLGPRGWSMSE----VSGNGQTKSLKGQIVGLIYATQ-FLRMPLIALNVL 294
           N++A+L+E+RFL   G   S     V G  Q  + K ++V LI A Q  LR+PLI +N+L
Sbjct: 18  NAVAVLSEERFLRRIGLGRSNDETPVFGQDQNTT-KSKVVQLIGAVQTLLRIPLIGINIL 76

Query: 295 IIVVKMVSG 321
           +IV +++ G
Sbjct: 77  VIVYELLLG 85



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>BOI2_YEAST (P39969) Protein BOI2 (Protein BEB1)|
          Length = 1040

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 24/82 (29%), Positives = 36/82 (43%)
 Frame = -3

Query: 381 HNAGN*NQINPTAETRERASA*HHFHNNDKNIKRYQGHPQKLSGIDEPHDLPLQRLCLPI 202
           +NA   NQ+ P A   +RAS              Y+GH +K S      DLP Q+  +P 
Sbjct: 345 NNANIYNQLMPPANVDQRAS--------------YRGHVRKTS--QSLEDLPSQQNFIPT 388

Query: 201 S*NFRHAPSPGTKKAVFIQDSQ 136
             N R++ +   +    + DSQ
Sbjct: 389 PRNTRNSSASKHRPKSLVFDSQ 410



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>ZBTB4_HUMAN (Q9P1Z0) Zinc finger and BTB domain-containing protein 4|
           (KAISO-like zinc finger protein 1) (KAISO-L1)
          Length = 1013

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -3

Query: 135 RICKKQKTLQQHPQAHLSDRPRGVP 61
           ++CK    L +H Q H ++RP G P
Sbjct: 772 KVCKTAAALSRHGQRHAAERPGGTP 796



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>EPL1_CRYNE (Q5K767) Enhancer of polycomb-like protein 1|
          Length = 846

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = -3

Query: 108 QQHPQAHLSDRPRGVP 61
           Q HPQAHL   P+GVP
Sbjct: 765 QGHPQAHLQTHPQGVP 780



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>Y392_BUCBP (Q89AC2) Hypothetical UPF0004 protein bbp_392|
          Length = 445

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 15/39 (38%), Positives = 26/39 (66%)
 Frame = -3

Query: 225 LQRLCLPIS*NFRHAPSPGTKKAVFIQDSQRICKKQKTL 109
           ++ L + +S +F ++P PGT  A  +QD+  +C+KQK L
Sbjct: 326 IKDLNIDMSYSFIYSPRPGTP-ASELQDNVTLCEKQKRL 363



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>V2R_PIG (P32307) Vasopressin V2 receptor (Renal-type arginine vasopressin|
           receptor) (Antidiuretic hormone receptor) (AVPR V2)
          Length = 370

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 19/58 (32%), Positives = 22/58 (37%)
 Frame = -2

Query: 253 WHR*APRSAPSTTLFAHFLKLQTCSIPWDQESGLHSG*PKNLQEAKNPPAASTSPSLR 80
           W   APR  P   L      L +C+ PW   S   S     L+     P   T PSLR
Sbjct: 295 WDPKAPREGPPFVLLMLLASLNSCTNPWIYAS-FSSSISSELRSLLCCPRRRTPPSLR 351



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>YFIH_BACSU (P54724) Hypothetical protein yfiH|
          Length = 313

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = -3

Query: 354 NPTAETRERASA*HHFHNNDKNIKRY 277
           +P    RE  SA HH H  D  I+RY
Sbjct: 209 DPIIAARELGSAIHHVHGKDVRIERY 234



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>TLR5_MOUSE (Q9JLF7) Toll-like receptor 5 precursor|
          Length = 859

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 16/32 (50%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
 Frame = +2

Query: 89  WACGCCWRVF---CFLQILWLS*MKTAFLVPG 175
           W  G CW VF     LQIL+LS     FL PG
Sbjct: 490 WETGLCWDVFQGLSRLQILYLSNNYLNFLPPG 521


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,459,183
Number of Sequences: 219361
Number of extensions: 1215702
Number of successful extensions: 3557
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3485
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3555
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2286875994
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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