| Clone Name | baal15p20 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 918 bits (463), Expect = 0.0 Identities = 463/463 (100%) Strand = Plus / Minus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119526 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 119467 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119466 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 119407 Query: 140 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119406 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 119347 Query: 200 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119346 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 119287 Query: 260 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119286 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 119227 Query: 320 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119226 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 119167 Query: 380 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119166 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 119107 Query: 440 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 482 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119106 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 119064 Score = 918 bits (463), Expect = 0.0 Identities = 463/463 (100%) Strand = Plus / Plus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95368 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 95427 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95428 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 95487 Query: 140 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95488 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 95547 Query: 200 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95548 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 95607 Query: 260 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95608 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 95667 Query: 320 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95668 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 95727 Query: 380 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95728 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 95787 Query: 440 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 482 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95788 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 95830
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 910 bits (459), Expect = 0.0 Identities = 462/463 (99%) Strand = Plus / Minus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118307 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 118248 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 139 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118247 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 118188 Query: 140 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118187 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 118128 Query: 200 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118127 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 118068 Query: 260 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118067 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 118008 Query: 320 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118007 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 117948 Query: 380 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117947 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 117888 Query: 440 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 482 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117887 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 117845
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 910 bits (459), Expect = 0.0 Identities = 462/463 (99%) Strand = Plus / Minus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119391 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 119332 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 139 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119331 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 119272 Query: 140 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119271 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 119212 Query: 200 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119211 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 119152 Query: 260 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119151 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 119092 Query: 320 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119091 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 119032 Query: 380 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119031 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 118972 Query: 440 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 482 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118971 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 118929 Score = 910 bits (459), Expect = 0.0 Identities = 462/463 (99%) Strand = Plus / Plus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95765 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 95824 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 139 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95825 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 95884 Query: 140 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95885 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 95944 Query: 200 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95945 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 96004 Query: 260 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96005 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 96064 Query: 320 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96065 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 96124 Query: 380 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96125 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 96184 Query: 440 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 482 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96185 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 96227
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 910 bits (459), Expect = 0.0 Identities = 462/463 (99%) Strand = Plus / Minus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119391 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 119332 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 139 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119331 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 119272 Query: 140 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119271 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 119212 Query: 200 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119211 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 119152 Query: 260 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119151 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 119092 Query: 320 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119091 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 119032 Query: 380 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119031 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 118972 Query: 440 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 482 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118971 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 118929 Score = 910 bits (459), Expect = 0.0 Identities = 462/463 (99%) Strand = Plus / Plus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95765 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 95824 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 139 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95825 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 95884 Query: 140 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95885 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 95944 Query: 200 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95945 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 96004 Query: 260 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96005 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 96064 Query: 320 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96065 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 96124 Query: 380 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96125 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 96184 Query: 440 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 482 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96185 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 96227
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 910 bits (459), Expect = 0.0 Identities = 462/463 (99%) Strand = Plus / Minus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119340 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 119281 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 139 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119280 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 119221 Query: 140 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119220 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 119161 Query: 200 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119160 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 119101 Query: 260 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119100 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 119041 Query: 320 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119040 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 118981 Query: 380 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118980 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 118921 Query: 440 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 482 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118920 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 118878 Score = 910 bits (459), Expect = 0.0 Identities = 462/463 (99%) Strand = Plus / Plus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95710 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 95769 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 139 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95770 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 95829 Query: 140 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95830 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 95889 Query: 200 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95890 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 95949 Query: 260 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95950 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 96009 Query: 320 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96010 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 96069 Query: 380 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96070 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 96129 Query: 440 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 482 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96130 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 96172
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 910 bits (459), Expect = 0.0 Identities = 462/463 (99%) Strand = Plus / Plus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508343 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 31508402 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 139 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508403 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 31508462 Query: 140 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508463 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 31508522 Query: 200 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508523 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 31508582 Query: 260 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508583 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 31508642 Query: 320 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508643 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 31508702 Query: 380 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508703 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 31508762 Query: 440 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 482 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508763 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 31508805 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 380 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataa 434 |||| ||||||||||||||| |||||| |||||| || |||||||| |||||||| Sbjct: 35945442 gcgaacggtaccaaatcgagacaaactttgaatattatatatgacctaaaaataa 35945496 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 462 atgggggataagcttcatcgt 482 ||||||||||||||||||||| Sbjct: 11513317 atgggggataagcttcatcgt 11513297
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 910 bits (459), Expect = 0.0 Identities = 462/463 (99%) Strand = Plus / Minus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84253 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 84194 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 139 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84193 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 84134 Query: 140 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84133 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 84074 Query: 200 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84073 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 84014 Query: 260 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84013 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 83954 Query: 320 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83953 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 83894 Query: 380 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83893 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 83834 Query: 440 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 482 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83833 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 83791
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 910 bits (459), Expect = 0.0 Identities = 462/463 (99%) Strand = Plus / Minus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119360 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 119301 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 139 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119300 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 119241 Query: 140 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119240 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 119181 Query: 200 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119180 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 119121 Query: 260 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119120 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 119061 Query: 320 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119060 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 119001 Query: 380 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119000 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 118941 Query: 440 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 482 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118940 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 118898 Score = 910 bits (459), Expect = 0.0 Identities = 462/463 (99%) Strand = Plus / Plus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95758 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 95817 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 139 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95818 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 95877 Query: 140 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95878 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 95937 Query: 200 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95938 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 95997 Query: 260 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95998 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 96057 Query: 320 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96058 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 96117 Query: 380 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96118 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 96177 Query: 440 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 482 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96178 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 96220
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 910 bits (459), Expect = 0.0 Identities = 462/463 (99%) Strand = Plus / Plus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14532 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 14591 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 139 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14592 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 14651 Query: 140 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14652 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 14711 Query: 200 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14712 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 14771 Query: 260 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14772 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 14831 Query: 320 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14832 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 14891 Query: 380 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14892 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 14951 Query: 440 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 482 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14952 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 14994 Score = 886 bits (447), Expect = 0.0 Identities = 460/463 (99%), Gaps = 1/463 (0%) Strand = Plus / Plus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122807 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 122866 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 139 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122867 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 122926 Query: 140 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 199 ||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| Sbjct: 122927 atagggcgattgtcactgcttatggacccgaac-taggtgatctatccatgaccaggatg 122985 Query: 200 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122986 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 123045 Query: 260 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123046 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 123105 Query: 320 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123106 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 123165 Query: 380 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123166 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 123225 Query: 440 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 482 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123226 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 123268
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 910 bits (459), Expect = 0.0 Identities = 462/463 (99%) Strand = Plus / Plus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141340 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 141399 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 139 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141400 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 141459 Query: 140 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141460 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 141519 Query: 200 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141520 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 141579 Query: 260 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141580 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 141639 Query: 320 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141640 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 141699 Query: 380 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141700 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 141759 Query: 440 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 482 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141760 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 141802
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 910 bits (459), Expect = 0.0 Identities = 462/463 (99%) Strand = Plus / Plus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93936 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 93995 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 139 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93996 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 94055 Query: 140 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94056 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 94115 Query: 200 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94116 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 94175 Query: 260 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94176 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 94235 Query: 320 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94236 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 94295 Query: 380 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94296 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 94355 Query: 440 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 482 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94356 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 94398
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 910 bits (459), Expect = 0.0 Identities = 462/463 (99%) Strand = Plus / Minus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58079 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 58020 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 139 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58019 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 57960 Query: 140 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57959 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 57900 Query: 200 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57899 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 57840 Query: 260 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57839 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 57780 Query: 320 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57779 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 57720 Query: 380 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57719 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 57660 Query: 440 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 482 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57659 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 57617
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 910 bits (459), Expect = 0.0 Identities = 462/463 (99%) Strand = Plus / Plus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28000 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 28059 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 139 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28060 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 28119 Query: 140 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28120 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 28179 Query: 200 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28180 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 28239 Query: 260 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28240 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 28299 Query: 320 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28300 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 28359 Query: 380 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28360 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 28419 Query: 440 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 482 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28420 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 28462
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 910 bits (459), Expect = 0.0 Identities = 462/463 (99%) Strand = Plus / Plus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268692 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 9268751 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 139 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268752 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 9268811 Query: 140 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268812 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 9268871 Query: 200 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268872 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 9268931 Query: 260 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268932 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 9268991 Query: 320 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268992 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 9269051 Query: 380 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269052 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 9269111 Query: 440 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 482 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269112 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 9269154 Score = 910 bits (459), Expect = 0.0 Identities = 462/463 (99%) Strand = Plus / Plus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056606 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 9056665 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 139 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056666 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 9056725 Query: 140 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056726 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 9056785 Query: 200 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056786 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 9056845 Query: 260 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056846 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 9056905 Query: 320 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056906 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 9056965 Query: 380 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056966 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 9057025 Query: 440 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 482 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057026 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 9057068 Score = 902 bits (455), Expect = 0.0 Identities = 461/463 (99%) Strand = Plus / Plus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228192 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 9228251 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 139 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228252 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 9228311 Query: 140 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 199 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 9228312 atagggcgattgtcactgcttatggacccgaacctaggtgatctatccatgaccaggatg 9228371 Query: 200 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228372 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 9228431 Query: 260 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228432 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 9228491 Query: 320 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228492 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 9228551 Query: 380 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228552 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 9228611 Query: 440 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 482 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228612 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 9228654 Score = 886 bits (447), Expect = 0.0 Identities = 460/463 (99%), Gaps = 1/463 (0%) Strand = Plus / Plus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164781 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 9164840 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 139 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164841 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 9164900 Query: 140 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 199 ||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| Sbjct: 9164901 atagggcgattgtcactgcttatggacccgaac-taggtgatctatccatgaccaggatg 9164959 Query: 200 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164960 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 9165019 Query: 260 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165020 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 9165079 Query: 320 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165080 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 9165139 Query: 380 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165140 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 9165199 Query: 440 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 482 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165200 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 9165242
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 910 bits (459), Expect = 0.0 Identities = 462/463 (99%) Strand = Plus / Plus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938677 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 19938736 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 139 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938737 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 19938796 Query: 140 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938797 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 19938856 Query: 200 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938857 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 19938916 Query: 260 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938917 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 19938976 Query: 320 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938977 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 19939036 Query: 380 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939037 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 19939096 Query: 440 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 482 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939097 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 19939139 Score = 910 bits (459), Expect = 0.0 Identities = 462/463 (99%) Strand = Plus / Plus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387544 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 10387603 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 139 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387604 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 10387663 Query: 140 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387664 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 10387723 Query: 200 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387724 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 10387783 Query: 260 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387784 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 10387843 Query: 320 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387844 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 10387903 Query: 380 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387904 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 10387963 Query: 440 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 482 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387964 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 10388006 Score = 910 bits (459), Expect = 0.0 Identities = 462/463 (99%) Strand = Plus / Minus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276754 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 10276695 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 139 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276694 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 10276635 Query: 140 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276634 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 10276575 Query: 200 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276574 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 10276515 Query: 260 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276514 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 10276455 Query: 320 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276454 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 10276395 Query: 380 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276394 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 10276335 Query: 440 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 482 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276334 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 10276292 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/53 (88%), Gaps = 2/53 (3%) Strand = Plus / Plus Query: 387 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 439 ||||||||||||| |||| ||| |||||||||| ||| |||||||||||||| Sbjct: 781053 gtaccaaatcgagacaaagtctaaatactagatgtga--caaaaataacaggg 781103
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 910 bits (459), Expect = 0.0 Identities = 462/463 (99%) Strand = Plus / Plus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598859 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 31598918 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 139 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598919 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 31598978 Query: 140 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598979 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 31599038 Query: 200 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599039 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 31599098 Query: 260 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599099 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 31599158 Query: 320 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599159 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 31599218 Query: 380 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599219 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 31599278 Query: 440 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 482 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599279 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 31599321 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 380 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataa 434 |||| ||||||||||||||| |||||| |||||| || |||||||| |||||||| Sbjct: 36035516 gcgaacggtaccaaatcgagacaaactttgaatattatatatgacctaaaaataa 36035570 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 462 atgggggataagcttcatcgt 482 ||||||||||||||||||||| Sbjct: 11510080 atgggggataagcttcatcgt 11510060
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 910 bits (459), Expect = 0.0 Identities = 462/463 (99%) Strand = Plus / Plus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526175 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 33526234 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 139 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526235 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 33526294 Query: 140 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526295 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 33526354 Query: 200 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526355 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 33526414 Query: 260 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526415 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 33526474 Query: 320 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526475 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 33526534 Query: 380 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526535 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 33526594 Query: 440 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 482 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526595 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 33526637 Score = 206 bits (104), Expect = 5e-50 Identities = 104/104 (100%) Strand = Plus / Minus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16678029 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 16677970 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgta 123 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16677969 taggcagtggcttggttaagggaacggaacccaccggagccgta 16677926 Score = 103 bits (52), Expect = 5e-19 Identities = 52/52 (100%) Strand = Plus / Minus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 71 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32744714 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 32744663
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 910 bits (459), Expect = 0.0 Identities = 462/463 (99%) Strand = Plus / Minus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47366 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 47307 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 139 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47306 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 47247 Query: 140 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47246 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 47187 Query: 200 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47186 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 47127 Query: 260 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47126 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 47067 Query: 320 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47066 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 47007 Query: 380 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47006 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 46947 Query: 440 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 482 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46946 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 46904
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 910 bits (459), Expect = 0.0 Identities = 462/463 (99%) Strand = Plus / Plus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71372 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 71431 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 139 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71432 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 71491 Query: 140 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71492 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 71551 Query: 200 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71552 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 71611 Query: 260 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71612 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 71671 Query: 320 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71672 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 71731 Query: 380 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71732 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 71791 Query: 440 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 482 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71792 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 71834
>dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E12, full insert sequence Length = 1517 Score = 910 bits (459), Expect = 0.0 Identities = 462/463 (99%) Strand = Plus / Plus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 336 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 395 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 139 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 396 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 455 Query: 140 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 456 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 515 Query: 200 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 516 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 575 Query: 260 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 576 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 635 Query: 320 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 636 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 695 Query: 380 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 696 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 755 Query: 440 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 482 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 756 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 798
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 910 bits (459), Expect = 0.0 Identities = 462/463 (99%) Strand = Plus / Plus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 144 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 203 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 139 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 204 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 263 Query: 140 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 264 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 323 Query: 200 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 324 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 383 Query: 260 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 384 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 443 Query: 320 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 444 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 503 Query: 380 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 504 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 563 Query: 440 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 482 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 564 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 606
>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full insert sequence Length = 1684 Score = 910 bits (459), Expect = 0.0 Identities = 462/463 (99%) Strand = Plus / Plus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 544 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 603 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 139 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 604 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 663 Query: 140 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 664 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 723 Query: 200 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 724 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 783 Query: 260 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 784 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 843 Query: 320 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 844 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 903 Query: 380 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 904 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 963 Query: 440 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 482 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 964 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 1006
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 910 bits (459), Expect = 0.0 Identities = 462/463 (99%) Strand = Plus / Plus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 339 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 398 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 139 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 399 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 458 Query: 140 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 459 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 518 Query: 200 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 519 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 578 Query: 260 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 579 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 638 Query: 320 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 639 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 698 Query: 380 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 699 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 758 Query: 440 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 482 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 759 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 801
>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full insert sequence Length = 1223 Score = 910 bits (459), Expect = 0.0 Identities = 462/463 (99%) Strand = Plus / Plus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 451 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 510 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 139 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 511 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 570 Query: 140 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 571 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 630 Query: 200 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 631 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 690 Query: 260 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 691 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 750 Query: 320 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 751 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 810 Query: 380 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 811 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 870 Query: 440 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 482 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 871 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 913
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 910 bits (459), Expect = 0.0 Identities = 462/463 (99%) Strand = Plus / Plus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 210 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 269 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 139 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 270 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 329 Query: 140 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 330 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 389 Query: 200 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 390 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 449 Query: 260 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 450 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 509 Query: 320 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 510 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 569 Query: 380 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 570 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 629 Query: 440 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 482 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 630 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 672
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 910 bits (459), Expect = 0.0 Identities = 462/463 (99%) Strand = Plus / Plus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 341 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 400 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 139 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 401 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 460 Query: 140 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 461 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 520 Query: 200 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 521 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 580 Query: 260 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 581 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 640 Query: 320 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 641 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 700 Query: 380 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 701 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 760 Query: 440 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 482 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 761 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 803
>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full insert sequence Length = 1634 Score = 910 bits (459), Expect = 0.0 Identities = 462/463 (99%) Strand = Plus / Plus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 160 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 219 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 139 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 220 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 279 Query: 140 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 280 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 339 Query: 200 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 340 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 399 Query: 260 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 400 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 459 Query: 320 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 460 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 519 Query: 380 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 520 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 579 Query: 440 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 482 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 580 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 622
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 910 bits (459), Expect = 0.0 Identities = 462/463 (99%) Strand = Plus / Plus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 339 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 398 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 139 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 399 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 458 Query: 140 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 459 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 518 Query: 200 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 519 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 578 Query: 260 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 579 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 638 Query: 320 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 639 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 698 Query: 380 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 699 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 758 Query: 440 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 482 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 759 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 801
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full insert sequence Length = 1462 Score = 910 bits (459), Expect = 0.0 Identities = 462/463 (99%) Strand = Plus / Plus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 341 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 400 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 139 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 401 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 460 Query: 140 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 461 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 520 Query: 200 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 521 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 580 Query: 260 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 581 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 640 Query: 320 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 641 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 700 Query: 380 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 701 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 760 Query: 440 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 482 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 761 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 803
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 910 bits (459), Expect = 0.0 Identities = 462/463 (99%) Strand = Plus / Plus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949953 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 19950012 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 139 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950013 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 19950072 Query: 140 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950073 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 19950132 Query: 200 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950133 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 19950192 Query: 260 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950193 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 19950252 Query: 320 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950253 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 19950312 Query: 380 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950313 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 19950372 Query: 440 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 482 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950373 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 19950415 Score = 910 bits (459), Expect = 0.0 Identities = 462/463 (99%) Strand = Plus / Plus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393583 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 10393642 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 139 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393643 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 10393702 Query: 140 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393703 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 10393762 Query: 200 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393763 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 10393822 Query: 260 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393823 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 10393882 Query: 320 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393883 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 10393942 Query: 380 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393943 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 10394002 Query: 440 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 482 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394003 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 10394045 Score = 910 bits (459), Expect = 0.0 Identities = 462/463 (99%) Strand = Plus / Minus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282793 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 10282734 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 139 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282733 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 10282674 Query: 140 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282673 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 10282614 Query: 200 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282613 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 10282554 Query: 260 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282553 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 10282494 Query: 320 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282493 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 10282434 Query: 380 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282433 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 10282374 Query: 440 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 482 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282373 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 10282331 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/53 (88%), Gaps = 2/53 (3%) Strand = Plus / Plus Query: 387 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 439 ||||||||||||| |||| ||| |||||||||| ||| |||||||||||||| Sbjct: 781050 gtaccaaatcgagacaaagtctaaatactagatgtga--caaaaataacaggg 781100
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 910 bits (459), Expect = 0.0 Identities = 462/463 (99%) Strand = Plus / Minus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119334 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 119275 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 139 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119274 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 119215 Query: 140 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119214 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 119155 Query: 200 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119154 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 119095 Query: 260 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119094 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 119035 Query: 320 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119034 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 118975 Query: 380 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118974 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 118915 Query: 440 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 482 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118914 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 118872 Score = 910 bits (459), Expect = 0.0 Identities = 462/463 (99%) Strand = Plus / Plus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95705 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 95764 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 139 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95765 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 95824 Query: 140 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95825 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 95884 Query: 200 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95885 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 95944 Query: 260 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95945 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 96004 Query: 320 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96005 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 96064 Query: 380 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96065 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 96124 Query: 440 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 482 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96125 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 96167
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 902 bits (455), Expect = 0.0 Identities = 461/463 (99%) Strand = Plus / Plus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20767 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 20826 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 139 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 20827 taggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttc 20886 Query: 140 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20887 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 20946 Query: 200 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20947 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 21006 Query: 260 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21007 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 21066 Query: 320 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21067 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 21126 Query: 380 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21127 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 21186 Query: 440 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 482 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21187 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 21229 Score = 864 bits (436), Expect = 0.0 Identities = 458/464 (98%), Gaps = 1/464 (0%) Strand = Plus / Minus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44351 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 44292 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 139 |||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||||| Sbjct: 44291 taggcagtggcttggttaagggaatggaaccctccggagccgtagtgaaagcgagtcttc 44232 Query: 140 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44231 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 44172 Query: 200 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44171 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 44112 Query: 260 gttgtggttaggggtg-aaatgccactcgaacccagagctagctggttctccccgaaatg 318 |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 44111 gttgtggttaggggtgtaaatgccactcgaacccagagctagttggttctccccgaaatg 44052 Query: 319 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 378 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44051 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 43992 Query: 379 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 438 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43991 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 43932 Query: 439 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgt 482 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43931 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgt 43888
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 902 bits (455), Expect = 0.0 Identities = 461/463 (99%) Strand = Plus / Minus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 980 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 921 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 139 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 920 taggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttc 861 Query: 140 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 860 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 801 Query: 200 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 800 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 741 Query: 260 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 740 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 681 Query: 320 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 680 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 621 Query: 380 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 620 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 561 Query: 440 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 482 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 560 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 518
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 902 bits (455), Expect = 0.0 Identities = 461/463 (99%) Strand = Plus / Minus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123190 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 123131 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 139 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 123130 taggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttc 123071 Query: 140 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123070 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 123011 Query: 200 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123010 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 122951 Query: 260 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122950 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 122891 Query: 320 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122890 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 122831 Query: 380 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122830 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 122771 Query: 440 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 482 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122770 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 122728 Score = 902 bits (455), Expect = 0.0 Identities = 461/463 (99%) Strand = Plus / Plus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99647 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 99706 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 139 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 99707 taggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttc 99766 Query: 140 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99767 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 99826 Query: 200 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99827 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 99886 Query: 260 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99887 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 99946 Query: 320 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99947 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 100006 Query: 380 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100007 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 100066 Query: 440 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 482 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100067 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 100109
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 902 bits (455), Expect = 0.0 Identities = 461/463 (99%) Strand = Plus / Plus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 338 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 397 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 139 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 398 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 457 Query: 140 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 458 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 517 Query: 200 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 259 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 518 aagcttggatgaaaccaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 577 Query: 260 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 578 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 637 Query: 320 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 638 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 697 Query: 380 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 698 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 757 Query: 440 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 482 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 758 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 800
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 902 bits (455), Expect = 0.0 Identities = 461/463 (99%) Strand = Plus / Minus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123907 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 123848 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 139 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 123847 taggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttc 123788 Query: 140 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123787 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 123728 Query: 200 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123727 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 123668 Query: 260 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123667 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 123608 Query: 320 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123607 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 123548 Query: 380 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123547 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 123488 Query: 440 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 482 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123487 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 123445 Score = 902 bits (455), Expect = 0.0 Identities = 461/463 (99%) Strand = Plus / Plus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100324 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 100383 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 139 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 100384 taggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttc 100443 Query: 140 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100444 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 100503 Query: 200 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100504 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 100563 Query: 260 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100564 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 100623 Query: 320 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100624 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 100683 Query: 380 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100684 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 100743 Query: 440 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 482 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100744 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 100786
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 894 bits (451), Expect = 0.0 Identities = 460/463 (99%) Strand = Plus / Minus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 9241589 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagctggcgactca 9241530 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 139 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241529 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 9241470 Query: 140 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241469 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 9241410 Query: 200 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 259 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 9241409 aagcttggatgaaactaagcagaggtccgaaccgtctgatgttgaagaatcagcggatga 9241350 Query: 260 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241349 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 9241290 Query: 320 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241289 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 9241230 Query: 380 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241229 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 9241170 Query: 440 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 482 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241169 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 9241127 Score = 165 bits (83), Expect = 2e-37 Identities = 120/131 (91%), Gaps = 1/131 (0%) Strand = Plus / Minus Query: 352 ggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaa 411 |||||||||| |||| |||||||| ||| ||||||| ||||||||||| ||||||||||| Sbjct: 3580549 ggtaaagcaccgtttaggtgcgggttgcacgagcggcaccaaatcgagacaaactctgaa 3580490 Query: 412 tactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggata 471 ||||||||||||||||||| |||||||||||| | |||| ||||||||||||||||||| Sbjct: 3580489 tactagatatgacccaaaagtaacaggggtcatgatcgg-tagtgagacgatgggggata 3580431 Query: 472 agcttcatcgt 482 ||||||||||| Sbjct: 3580430 agcttcatcgt 3580420
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 894 bits (451), Expect = 0.0 Identities = 460/463 (99%) Strand = Plus / Minus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 52802 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagctggcgactca 52743 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 139 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52742 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 52683 Query: 140 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52682 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 52623 Query: 200 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 259 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 52622 aagcttggatgaaactaagcagaggtccgaaccgtctgatgttgaagaatcagcggatga 52563 Query: 260 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52562 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 52503 Query: 320 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52502 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 52443 Query: 380 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52442 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 52383 Query: 440 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 482 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52382 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 52340
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 886 bits (447), Expect = 0.0 Identities = 460/463 (99%), Gaps = 1/463 (0%) Strand = Plus / Minus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123130 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 123071 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 139 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 123070 taggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttc 123011 Query: 140 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123010 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 122951 Query: 200 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122950 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 122891 Query: 260 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122890 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 122831 Query: 320 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 379 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 122830 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgc-ggctgc 122772 Query: 380 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122771 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 122712 Query: 440 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 482 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122711 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 122669 Score = 886 bits (447), Expect = 0.0 Identities = 460/463 (99%), Gaps = 1/463 (0%) Strand = Plus / Plus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99607 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 99666 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 139 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 99667 taggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttc 99726 Query: 140 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99727 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 99786 Query: 200 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99787 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 99846 Query: 260 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99847 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 99906 Query: 320 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 379 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 99907 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgc-ggctgc 99965 Query: 380 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99966 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 100025 Query: 440 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 482 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100026 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 100068
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 886 bits (447), Expect = 0.0 Identities = 460/463 (99%), Gaps = 1/463 (0%) Strand = Plus / Plus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5960 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 6019 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 139 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 6020 taggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttc 6079 Query: 140 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6080 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 6139 Query: 200 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6140 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 6199 Query: 260 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6200 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 6259 Query: 320 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 379 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 6260 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgc-ggctgc 6318 Query: 380 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6319 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 6378 Query: 440 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 482 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6379 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 6421
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 886 bits (447), Expect = 0.0 Identities = 460/463 (99%), Gaps = 1/463 (0%) Strand = Plus / Plus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 548 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 607 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 139 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 608 taggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttc 667 Query: 140 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 668 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 727 Query: 200 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 728 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 787 Query: 260 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 788 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 847 Query: 320 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 379 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 848 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgc-ggctgc 906 Query: 380 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 907 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 966 Query: 440 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 482 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 967 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 1009
>gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, partial sequence; chloroplast Length = 982 Score = 850 bits (429), Expect = 0.0 Identities = 435/437 (99%) Strand = Plus / Minus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 437 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 378 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 139 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 377 taggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttc 318 Query: 140 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 317 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 258 Query: 200 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 257 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 198 Query: 260 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 197 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 138 Query: 320 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 137 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 78 Query: 380 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 77 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 18 Query: 440 gtcaaggtcggccagtg 456 ||||||||||||||||| Sbjct: 17 gtcaaggtcggccagtg 1
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 837 bits (422), Expect = 0.0 Identities = 455/465 (97%), Gaps = 2/465 (0%) Strand = Plus / Minus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 122672 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggtgactca 122613 Query: 80 taggcagtg--gcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 137 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122612 taggcagtgtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 122553 Query: 138 taatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 197 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122552 tcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 122493 Query: 198 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggat 257 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 122492 tgaagcttggatgaaactaagcagaggttcgaaccgactgatgttgaagaatcagcggat 122433 Query: 258 gagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaat 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122432 gagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaat 122373 Query: 318 gcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggct 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122372 gcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggct 122313 Query: 378 gcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacag 437 |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || Sbjct: 122312 gcgcgagcggtaccaaattgaggcaaactctgaatactagatatgacccaaaaataatag 122253 Query: 438 gggtcaaggtcggccagtgagacgatgggggataagcttcatcgt 482 | |||| ||||||||||||||||||||||||||||||||||||| Sbjct: 122252 gattcaaagtcggccagtgagacgatgggggataagcttcatcgt 122208
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 837 bits (422), Expect = 0.0 Identities = 455/465 (97%), Gaps = 2/465 (0%) Strand = Plus / Minus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 12825213 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggtgactca 12825154 Query: 80 taggcagtg--gcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 137 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825153 taggcagtgtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 12825094 Query: 138 taatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 197 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825093 tcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 12825034 Query: 198 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggat 257 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 12825033 tgaagcttggatgaaactaagcagaggttcgaaccgactgatgttgaagaatcagcggat 12824974 Query: 258 gagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaat 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12824973 gagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaat 12824914 Query: 318 gcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggct 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12824913 gcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggct 12824854 Query: 378 gcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacag 437 |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || Sbjct: 12824853 gcgcgagcggtaccaaattgaggcaaactctgaatactagatatgacccaaaaataatag 12824794 Query: 438 gggtcaaggtcggccagtgagacgatgggggataagcttcatcgt 482 | |||| ||||||||||||||||||||||||||||||||||||| Sbjct: 12824793 gattcaaagtcggccagtgagacgatgggggataagcttcatcgt 12824749
>dbj|AK058324.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B08, full insert sequence Length = 1310 Score = 831 bits (419), Expect = 0.0 Identities = 422/423 (99%) Strand = Plus / Plus Query: 60 aagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagc 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2 aagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagc 61 Query: 120 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 179 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 62 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 121 Query: 180 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 181 Query: 240 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 241 Query: 300 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 242 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 301 Query: 360 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 302 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 361 Query: 420 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 362 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 421 Query: 480 cgt 482 ||| Sbjct: 422 cgt 424
>dbj|AK059795.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-E09, full insert sequence Length = 819 Score = 829 bits (418), Expect = 0.0 Identities = 421/422 (99%) Strand = Plus / Plus Query: 61 agaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagcc 60 Query: 121 gtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtga 180 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtga 120 Query: 181 tctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatg 180 Query: 241 ttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctag 240 Query: 301 ctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagca 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagca 300 Query: 361 ctgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagata 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 ctgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagata 360 Query: 421 tgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 tgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatc 420 Query: 481 gt 482 || Sbjct: 421 gt 422
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 783 bits (395), Expect = 0.0 Identities = 446/463 (96%), Gaps = 5/463 (1%) Strand = Plus / Minus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141566 cagtgggaggagaatttgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 141507 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 139 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 141506 taggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttc 141452 Query: 140 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 199 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141451 atagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 141392 Query: 200 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 259 |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 141391 aagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatga 141332 Query: 260 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141331 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 141272 Query: 320 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 379 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 141271 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgc 141212 Query: 380 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 439 | ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 141211 gagagcggtaccaaatcgaggcaaactctgaatactagatatgaccccaaaataacaggg 141152 Query: 440 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 482 || |||||||||||||||||||||||||||||||||||||||| Sbjct: 141151 gtaaaggtcggccagtgagacgatgggggataagcttcatcgt 141109 Score = 783 bits (395), Expect = 0.0 Identities = 446/463 (96%), Gaps = 5/463 (1%) Strand = Plus / Plus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112091 cagtgggaggagaatttgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 112150 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 139 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 112151 taggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttc 112205 Query: 140 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 199 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112206 atagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 112265 Query: 200 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 259 |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 112266 aagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatga 112325 Query: 260 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112326 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 112385 Query: 320 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 379 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 112386 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgc 112445 Query: 380 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 439 | ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 112446 gagagcggtaccaaatcgaggcaaactctgaatactagatatgaccccaaaataacaggg 112505 Query: 440 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 482 || |||||||||||||||||||||||||||||||||||||||| Sbjct: 112506 gtaaaggtcggccagtgagacgatgggggataagcttcatcgt 112548
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 783 bits (395), Expect = 0.0 Identities = 447/463 (96%), Gaps = 6/463 (1%) Strand = Plus / Minus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133681 cagtgggaggagaatgtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 133622 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 139 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 133621 taggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttc 133567 Query: 140 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133566 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 133507 Query: 200 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 259 |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 133506 aagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatga 133447 Query: 260 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133446 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 133387 Query: 320 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 379 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 133386 gttgaggcgcagcagttgactagacatctaggggtaaagcactgtttcggtgcgggccgc 133327 Query: 380 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 439 | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || Sbjct: 133326 gagagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaatcaca-gg 133268 Query: 440 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 482 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133267 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 133225 Score = 783 bits (395), Expect = 0.0 Identities = 447/463 (96%), Gaps = 6/463 (1%) Strand = Plus / Plus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104290 cagtgggaggagaatgtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 104349 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 139 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 104350 taggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttc 104404 Query: 140 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104405 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 104464 Query: 200 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 259 |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 104465 aagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatga 104524 Query: 260 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104525 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 104584 Query: 320 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 379 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 104585 gttgaggcgcagcagttgactagacatctaggggtaaagcactgtttcggtgcgggccgc 104644 Query: 380 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 439 | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || Sbjct: 104645 gagagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaatcaca-gg 104703 Query: 440 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 482 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104704 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 104746
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 767 bits (387), Expect = 0.0 Identities = 429/443 (96%), Gaps = 5/443 (1%) Strand = Plus / Minus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132214 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 132155 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 132154 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 132100 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 132099 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 132040 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132039 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 131980 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131979 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 131920 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 131919 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 131860 Query: 400 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 459 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 131859 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgaga 131800 Query: 460 cgatgggggataagcttcatcgt 482 ||||||||||||||||||||||| Sbjct: 131799 cgatgggggataagcttcatcgt 131777 Score = 767 bits (387), Expect = 0.0 Identities = 429/443 (96%), Gaps = 5/443 (1%) Strand = Plus / Plus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104664 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 104723 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 104724 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 104778 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 104779 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 104838 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104839 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 104898 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104899 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 104958 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 104959 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 105018 Query: 400 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 459 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 105019 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgaga 105078 Query: 460 cgatgggggataagcttcatcgt 482 ||||||||||||||||||||||| Sbjct: 105079 cgatgggggataagcttcatcgt 105101
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 767 bits (387), Expect = 0.0 Identities = 429/443 (96%), Gaps = 5/443 (1%) Strand = Plus / Minus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131106 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 131047 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 131046 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 130992 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 130991 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 130932 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130931 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 130872 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130871 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 130812 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 130811 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 130752 Query: 400 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 459 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 130751 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgaga 130692 Query: 460 cgatgggggataagcttcatcgt 482 ||||||||||||||||||||||| Sbjct: 130691 cgatgggggataagcttcatcgt 130669 Score = 767 bits (387), Expect = 0.0 Identities = 429/443 (96%), Gaps = 5/443 (1%) Strand = Plus / Plus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103529 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 103588 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 103589 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 103643 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 103644 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 103703 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103704 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 103763 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103764 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 103823 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 103824 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 103883 Query: 400 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 459 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 103884 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgaga 103943 Query: 460 cgatgggggataagcttcatcgt 482 ||||||||||||||||||||||| Sbjct: 103944 cgatgggggataagcttcatcgt 103966
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 767 bits (387), Expect = 0.0 Identities = 429/443 (96%), Gaps = 5/443 (1%) Strand = Plus / Minus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132207 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 132148 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 132147 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 132093 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 132092 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 132033 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132032 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 131973 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131972 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 131913 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 131912 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 131853 Query: 400 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 459 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 131852 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgaga 131793 Query: 460 cgatgggggataagcttcatcgt 482 ||||||||||||||||||||||| Sbjct: 131792 cgatgggggataagcttcatcgt 131770 Score = 767 bits (387), Expect = 0.0 Identities = 429/443 (96%), Gaps = 5/443 (1%) Strand = Plus / Plus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104662 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 104721 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 104722 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 104776 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 104777 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 104836 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104837 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 104896 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104897 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 104956 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 104957 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 105016 Query: 400 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 459 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 105017 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgaga 105076 Query: 460 cgatgggggataagcttcatcgt 482 ||||||||||||||||||||||| Sbjct: 105077 cgatgggggataagcttcatcgt 105099
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 767 bits (387), Expect = 0.0 Identities = 429/443 (96%), Gaps = 5/443 (1%) Strand = Plus / Plus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 562 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 621 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 622 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 676 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 677 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 736 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 737 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 796 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 797 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 856 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 857 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 916 Query: 400 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 459 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 917 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgaga 976 Query: 460 cgatgggggataagcttcatcgt 482 ||||||||||||||||||||||| Sbjct: 977 cgatgggggataagcttcatcgt 999
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 759 bits (383), Expect = 0.0 Identities = 428/443 (96%), Gaps = 5/443 (1%) Strand = Plus / Minus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138943 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 138884 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 138883 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 138829 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 138828 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 138769 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138768 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 138709 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138708 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 138649 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 138648 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 138589 Query: 400 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 459 |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| Sbjct: 138588 gcaaactctgaatactagatatgacctcaaaataacaggggtcgaggtcggccagtgaga 138529 Query: 460 cgatgggggataagcttcatcgt 482 ||||||||||||||||||||||| Sbjct: 138528 cgatgggggataagcttcatcgt 138506 Score = 759 bits (383), Expect = 0.0 Identities = 428/443 (96%), Gaps = 5/443 (1%) Strand = Plus / Plus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110154 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 110213 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 110214 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 110268 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 110269 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 110328 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110329 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 110388 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110389 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 110448 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 110449 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 110508 Query: 400 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 459 |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| Sbjct: 110509 gcaaactctgaatactagatatgacctcaaaataacaggggtcgaggtcggccagtgaga 110568 Query: 460 cgatgggggataagcttcatcgt 482 ||||||||||||||||||||||| Sbjct: 110569 cgatgggggataagcttcatcgt 110591
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 759 bits (383), Expect = 0.0 Identities = 428/443 (96%), Gaps = 5/443 (1%) Strand = Plus / Minus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135739 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 135680 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 135679 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 135625 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135624 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 135565 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135564 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 135505 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135504 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 135445 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 135444 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 135385 Query: 400 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 459 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 135384 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 135325 Query: 460 cgatgggggataagcttcatcgt 482 ||||||||||||||||||||||| Sbjct: 135324 cgatgggggataagcttcatcgt 135302 Score = 759 bits (383), Expect = 0.0 Identities = 428/443 (96%), Gaps = 5/443 (1%) Strand = Plus / Plus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106891 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106950 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106951 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 107005 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 107006 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 107065 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107066 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 107125 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107126 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 107185 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 107186 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 107245 Query: 400 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 459 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 107246 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 107305 Query: 460 cgatgggggataagcttcatcgt 482 ||||||||||||||||||||||| Sbjct: 107306 cgatgggggataagcttcatcgt 107328
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 759 bits (383), Expect = 0.0 Identities = 428/443 (96%), Gaps = 5/443 (1%) Strand = Plus / Minus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136377 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 136318 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 136317 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 136263 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 136262 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 136203 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136202 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 136143 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136142 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 136083 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 136082 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 136023 Query: 400 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 459 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 136022 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 135963 Query: 460 cgatgggggataagcttcatcgt 482 ||||||||||||||||||||||| Sbjct: 135962 cgatgggggataagcttcatcgt 135940 Score = 759 bits (383), Expect = 0.0 Identities = 428/443 (96%), Gaps = 5/443 (1%) Strand = Plus / Plus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107180 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 107239 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 107240 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 107294 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 107295 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 107354 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107355 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 107414 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107415 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 107474 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 107475 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 107534 Query: 400 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 459 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 107535 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 107594 Query: 460 cgatgggggataagcttcatcgt 482 ||||||||||||||||||||||| Sbjct: 107595 cgatgggggataagcttcatcgt 107617
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 759 bits (383), Expect = 0.0 Identities = 428/443 (96%), Gaps = 5/443 (1%) Strand = Plus / Minus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142318 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 142259 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 142258 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 142204 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142203 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 142144 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142143 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 142084 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 142083 gccactcgaacccagagctagctcgttctccccgaaatgcgttgaggcgcagcagttgac 142024 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 142023 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 141964 Query: 400 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 459 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 141963 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 141904 Query: 460 cgatgggggataagcttcatcgt 482 ||||||||||||||||| ||||| Sbjct: 141903 cgatgggggataagcttgatcgt 141881 Score = 759 bits (383), Expect = 0.0 Identities = 428/443 (96%), Gaps = 5/443 (1%) Strand = Plus / Plus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111010 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 111069 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 111070 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 111124 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111125 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 111184 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111185 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 111244 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 111245 gccactcgaacccagagctagctcgttctccccgaaatgcgttgaggcgcagcagttgac 111304 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 111305 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 111364 Query: 400 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 459 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 111365 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 111424 Query: 460 cgatgggggataagcttcatcgt 482 ||||||||||||||||| ||||| Sbjct: 111425 cgatgggggataagcttgatcgt 111447
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 759 bits (383), Expect = 0.0 Identities = 428/443 (96%), Gaps = 5/443 (1%) Strand = Plus / Plus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2085 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 2144 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 2145 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 2199 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 2200 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 2259 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2260 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 2319 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2320 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 2379 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 2380 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 2439 Query: 400 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 459 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 2440 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 2499 Query: 460 cgatgggggataagcttcatcgt 482 ||||||||||||||||||||||| Sbjct: 2500 cgatgggggataagcttcatcgt 2522
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 759 bits (383), Expect = 0.0 Identities = 428/443 (96%), Gaps = 5/443 (1%) Strand = Plus / Minus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134985 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 134926 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 134925 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 134871 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 134870 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 134811 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134810 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 134751 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134750 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 134691 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 134690 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 134631 Query: 400 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 459 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 134630 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 134571 Query: 460 cgatgggggataagcttcatcgt 482 ||||||||||||||||||||||| Sbjct: 134570 cgatgggggataagcttcatcgt 134548 Score = 759 bits (383), Expect = 0.0 Identities = 428/443 (96%), Gaps = 5/443 (1%) Strand = Plus / Plus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106051 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106110 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106111 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 106165 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106166 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 106225 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106226 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 106285 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106286 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 106345 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 106346 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 106405 Query: 400 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 459 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 106406 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 106465 Query: 460 cgatgggggataagcttcatcgt 482 ||||||||||||||||||||||| Sbjct: 106466 cgatgggggataagcttcatcgt 106488
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 759 bits (383), Expect = 0.0 Identities = 428/443 (96%), Gaps = 5/443 (1%) Strand = Plus / Minus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136031 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 135972 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 135971 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 135917 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135916 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 135857 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135856 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 135797 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135796 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 135737 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 135736 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 135677 Query: 400 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 459 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 135676 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 135617 Query: 460 cgatgggggataagcttcatcgt 482 ||||||||||||||||||||||| Sbjct: 135616 cgatgggggataagcttcatcgt 135594 Score = 759 bits (383), Expect = 0.0 Identities = 428/443 (96%), Gaps = 5/443 (1%) Strand = Plus / Plus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106394 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106453 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106454 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 106508 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106509 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 106568 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106569 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 106628 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106629 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 106688 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 106689 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 106748 Query: 400 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 459 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 106749 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 106808 Query: 460 cgatgggggataagcttcatcgt 482 ||||||||||||||||||||||| Sbjct: 106809 cgatgggggataagcttcatcgt 106831
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 759 bits (383), Expect = 0.0 Identities = 428/443 (96%), Gaps = 5/443 (1%) Strand = Plus / Minus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135120 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 135061 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 135060 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 135006 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135005 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 134946 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134945 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 134886 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134885 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 134826 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 134825 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 134766 Query: 400 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 459 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 134765 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 134706 Query: 460 cgatgggggataagcttcatcgt 482 ||||||||||||||||||||||| Sbjct: 134705 cgatgggggataagcttcatcgt 134683 Score = 759 bits (383), Expect = 0.0 Identities = 428/443 (96%), Gaps = 5/443 (1%) Strand = Plus / Plus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106223 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106282 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106283 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 106337 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106338 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 106397 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106398 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 106457 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106458 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 106517 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 106518 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 106577 Query: 400 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 459 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 106578 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 106637 Query: 460 cgatgggggataagcttcatcgt 482 ||||||||||||||||||||||| Sbjct: 106638 cgatgggggataagcttcatcgt 106660
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 759 bits (383), Expect = 0.0 Identities = 428/443 (96%), Gaps = 5/443 (1%) Strand = Plus / Minus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135118 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 135059 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 135058 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 135004 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135003 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 134944 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134943 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 134884 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134883 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 134824 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 134823 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 134764 Query: 400 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 459 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 134763 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 134704 Query: 460 cgatgggggataagcttcatcgt 482 ||||||||||||||||||||||| Sbjct: 134703 cgatgggggataagcttcatcgt 134681 Score = 759 bits (383), Expect = 0.0 Identities = 428/443 (96%), Gaps = 5/443 (1%) Strand = Plus / Plus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106220 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106279 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106280 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 106334 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106335 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 106394 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106395 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 106454 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106455 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 106514 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 106515 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 106574 Query: 400 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 459 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 106575 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 106634 Query: 460 cgatgggggataagcttcatcgt 482 ||||||||||||||||||||||| Sbjct: 106635 cgatgggggataagcttcatcgt 106657
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 759 bits (383), Expect = 0.0 Identities = 428/443 (96%), Gaps = 5/443 (1%) Strand = Plus / Minus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135030 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 134971 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 134970 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 134916 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 134915 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 134856 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134855 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 134796 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134795 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 134736 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 134735 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 134676 Query: 400 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 459 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 134675 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 134616 Query: 460 cgatgggggataagcttcatcgt 482 ||||||||||||||||||||||| Sbjct: 134615 cgatgggggataagcttcatcgt 134593 Score = 759 bits (383), Expect = 0.0 Identities = 428/443 (96%), Gaps = 5/443 (1%) Strand = Plus / Plus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106098 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106157 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106158 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 106212 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106213 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 106272 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106273 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 106332 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106333 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 106392 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 106393 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 106452 Query: 400 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 459 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 106453 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 106512 Query: 460 cgatgggggataagcttcatcgt 482 ||||||||||||||||||||||| Sbjct: 106513 cgatgggggataagcttcatcgt 106535
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 759 bits (383), Expect = 0.0 Identities = 428/443 (96%), Gaps = 5/443 (1%) Strand = Plus / Minus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135737 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 135678 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 135677 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 135623 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135622 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 135563 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135562 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 135503 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135502 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 135443 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 135442 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 135383 Query: 400 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 459 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 135382 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 135323 Query: 460 cgatgggggataagcttcatcgt 482 ||||||||||||||||||||||| Sbjct: 135322 cgatgggggataagcttcatcgt 135300 Score = 759 bits (383), Expect = 0.0 Identities = 428/443 (96%), Gaps = 5/443 (1%) Strand = Plus / Plus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106889 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106948 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106949 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 107003 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 107004 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 107063 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107064 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 107123 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107124 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 107183 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 107184 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 107243 Query: 400 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 459 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 107244 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 107303 Query: 460 cgatgggggataagcttcatcgt 482 ||||||||||||||||||||||| Sbjct: 107304 cgatgggggataagcttcatcgt 107326
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 759 bits (383), Expect = 0.0 Identities = 428/443 (96%), Gaps = 5/443 (1%) Strand = Plus / Minus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135468 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 135409 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 135408 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 135354 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135353 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 135294 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135293 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 135234 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135233 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 135174 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 135173 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 135114 Query: 400 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 459 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 135113 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 135054 Query: 460 cgatgggggataagcttcatcgt 482 ||||||||||||||||||||||| Sbjct: 135053 cgatgggggataagcttcatcgt 135031 Score = 759 bits (383), Expect = 0.0 Identities = 428/443 (96%), Gaps = 5/443 (1%) Strand = Plus / Plus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106670 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106729 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106730 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 106784 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106785 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 106844 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106845 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 106904 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106905 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 106964 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 106965 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 107024 Query: 400 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 459 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 107025 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 107084 Query: 460 cgatgggggataagcttcatcgt 482 ||||||||||||||||||||||| Sbjct: 107085 cgatgggggataagcttcatcgt 107107
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 759 bits (383), Expect = 0.0 Identities = 428/443 (96%), Gaps = 5/443 (1%) Strand = Plus / Plus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 658 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 717 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 718 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 772 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 773 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 832 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 833 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 892 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 893 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 952 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 953 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 1012 Query: 400 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 459 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 1013 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 1072 Query: 460 cgatgggggataagcttcatcgt 482 ||||||||||||||||||||||| Sbjct: 1073 cgatgggggataagcttcatcgt 1095
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 757 bits (382), Expect = 0.0 Identities = 443/463 (95%), Gaps = 9/463 (1%) Strand = Plus / Minus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127322 cagtgggaggagaatgtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 127263 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 139 |||||||||||||||||||||||| |||||| |||||||||||||||||||||| Sbjct: 127262 taggcagtggcttggttaagggaat-----ccaccgtagccgtagcgaaagcgagtcttc 127208 Query: 140 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127207 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 127148 Query: 200 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 259 |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 127147 aagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatga 127088 Query: 260 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127087 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 127028 Query: 320 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 379 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 127027 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgc 126968 Query: 380 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 439 | ||||||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct: 126967 gagagcggtaccaaatcgaggcaaactctgaatactagatatgacccca----aacaggg 126912 Query: 440 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 482 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126911 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 126869 Score = 757 bits (382), Expect = 0.0 Identities = 443/463 (95%), Gaps = 9/463 (1%) Strand = Plus / Plus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107600 cagtgggaggagaatgtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 107659 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 139 |||||||||||||||||||||||| |||||| |||||||||||||||||||||| Sbjct: 107660 taggcagtggcttggttaagggaat-----ccaccgtagccgtagcgaaagcgagtcttc 107714 Query: 140 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107715 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 107774 Query: 200 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 259 |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 107775 aagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatga 107834 Query: 260 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107835 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 107894 Query: 320 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 379 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 107895 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgc 107954 Query: 380 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 439 | ||||||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct: 107955 gagagcggtaccaaatcgaggcaaactctgaatactagatatgacccca----aacaggg 108010 Query: 440 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 482 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108011 gtcaaggtcggccagtgagacgatgggggataagcttcatcgt 108053
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 755 bits (381), Expect = 0.0 Identities = 426/441 (96%), Gaps = 5/441 (1%) Strand = Plus / Minus Query: 42 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 101 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131228 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 131169 Query: 102 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 161 ||| ||||||||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 131168 aac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgctta 131114 Query: 162 tggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcag 221 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct: 131113 tggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtgg 131054 Query: 222 aggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgc 281 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131053 aggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgc 130994 Query: 282 cactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactg 341 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130993 cactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactg 130934 Query: 342 gacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 401 ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| Sbjct: 130933 gacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggc 130874 Query: 402 aaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacg 461 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 130873 aaactctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgagacg 130814 Query: 462 atgggggataagcttcatcgt 482 ||||||||||||||||||||| Sbjct: 130813 atgggggataagcttcatcgt 130793 Score = 755 bits (381), Expect = 0.0 Identities = 426/441 (96%), Gaps = 5/441 (1%) Strand = Plus / Plus Query: 42 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 101 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102217 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 102276 Query: 102 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 161 ||| ||||||||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 102277 aac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgctta 102331 Query: 162 tggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcag 221 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct: 102332 tggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtgg 102391 Query: 222 aggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgc 281 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102392 aggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgc 102451 Query: 282 cactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactg 341 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102452 cactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactg 102511 Query: 342 gacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 401 ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| Sbjct: 102512 gacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggc 102571 Query: 402 aaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacg 461 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 102572 aaactctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgagacg 102631 Query: 462 atgggggataagcttcatcgt 482 ||||||||||||||||||||| Sbjct: 102632 atgggggataagcttcatcgt 102652
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 753 bits (380), Expect = 0.0 Identities = 446/468 (95%), Gaps = 10/468 (2%) Strand = Plus / Minus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139044 cagtgggaggagaatttgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 138985 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 139 ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 138984 taggcagtggcttggttaagggaac-----ccaccggagccatagcgaaagcgagtcttc 138930 Query: 140 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 199 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138929 atagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 138870 Query: 200 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 259 |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 138869 aagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatga 138810 Query: 260 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138809 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 138750 Query: 320 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 379 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 138749 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgc 138690 Query: 380 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc-----aaaaataa 434 | ||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 138689 gagagcggtaccaaatcgaggcaaactctgaatactagatatgaccccaaaacaaaataa 138630 Query: 435 caggggtcaaggtcggccagtgagacgatgggggataagcttcatcgt 482 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138629 caggggtcaaggtcggccagtgagacgatgggggataagcttcatcgt 138582 Score = 753 bits (380), Expect = 0.0 Identities = 446/468 (95%), Gaps = 10/468 (2%) Strand = Plus / Plus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110901 cagtgggaggagaatttgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 110960 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 139 ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 110961 taggcagtggcttggttaagggaac-----ccaccggagccatagcgaaagcgagtcttc 111015 Query: 140 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 199 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111016 atagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 111075 Query: 200 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 259 |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 111076 aagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatga 111135 Query: 260 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111136 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 111195 Query: 320 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 379 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 111196 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgc 111255 Query: 380 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc-----aaaaataa 434 | ||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 111256 gagagcggtaccaaatcgaggcaaactctgaatactagatatgaccccaaaacaaaataa 111315 Query: 435 caggggtcaaggtcggccagtgagacgatgggggataagcttcatcgt 482 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111316 caggggtcaaggtcggccagtgagacgatgggggataagcttcatcgt 111363
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 751 bits (379), Expect = 0.0 Identities = 427/443 (96%), Gaps = 5/443 (1%) Strand = Plus / Minus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135340 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 135281 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 ||||| ||||||||||||||||||||||||||||| || |||| |||||||||||| Sbjct: 135280 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatggggcaattgtcactgct 135226 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135225 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 135166 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135165 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 135106 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135105 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 135046 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 135045 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 134986 Query: 400 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 459 |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| Sbjct: 134985 gcaaactctgaatactagatatgatctcaaaataacaggggtcaaggtcggccagtgaga 134926 Query: 460 cgatgggggataagcttcatcgt 482 ||||||||||||||||||||||| Sbjct: 134925 cgatgggggataagcttcatcgt 134903 Score = 751 bits (379), Expect = 0.0 Identities = 427/443 (96%), Gaps = 5/443 (1%) Strand = Plus / Plus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106566 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106625 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 ||||| ||||||||||||||||||||||||||||| || |||| |||||||||||| Sbjct: 106626 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatggggcaattgtcactgct 106680 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106681 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 106740 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106741 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 106800 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106801 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 106860 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 106861 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 106920 Query: 400 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 459 |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| Sbjct: 106921 gcaaactctgaatactagatatgatctcaaaataacaggggtcaaggtcggccagtgaga 106980 Query: 460 cgatgggggataagcttcatcgt 482 ||||||||||||||||||||||| Sbjct: 106981 cgatgggggataagcttcatcgt 107003
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 751 bits (379), Expect = 0.0 Identities = 427/443 (96%), Gaps = 5/443 (1%) Strand = Plus / Minus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135619 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 135560 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 ||||| ||||||||||||||||||||||||||||| || |||| |||||||||||| Sbjct: 135559 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatggggcaattgtcactgct 135505 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135504 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 135445 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135444 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 135385 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135384 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 135325 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 135324 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 135265 Query: 400 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 459 |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| Sbjct: 135264 gcaaactctgaatactagatatgatctcaaaataacaggggtcaaggtcggccagtgaga 135205 Query: 460 cgatgggggataagcttcatcgt 482 ||||||||||||||||||||||| Sbjct: 135204 cgatgggggataagcttcatcgt 135182 Score = 751 bits (379), Expect = 0.0 Identities = 427/443 (96%), Gaps = 5/443 (1%) Strand = Plus / Plus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106788 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106847 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 ||||| ||||||||||||||||||||||||||||| || |||| |||||||||||| Sbjct: 106848 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatggggcaattgtcactgct 106902 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106903 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 106962 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106963 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 107022 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107023 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 107082 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 107083 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 107142 Query: 400 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 459 |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| Sbjct: 107143 gcaaactctgaatactagatatgatctcaaaataacaggggtcaaggtcggccagtgaga 107202 Query: 460 cgatgggggataagcttcatcgt 482 ||||||||||||||||||||||| Sbjct: 107203 cgatgggggataagcttcatcgt 107225
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 751 bits (379), Expect = 0.0 Identities = 427/443 (96%), Gaps = 5/443 (1%) Strand = Plus / Minus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139148 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139089 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 139088 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 139034 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 139033 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 138974 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138973 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 138914 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138913 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 138854 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 138853 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 138794 Query: 400 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 459 |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| Sbjct: 138793 gcaaactctgaatactagatatgacctccaaataataggggtcaaggtcggccagtgaga 138734 Query: 460 cgatgggggataagcttcatcgt 482 ||||||||||||||||||||||| Sbjct: 138733 cgatgggggataagcttcatcgt 138711 Score = 751 bits (379), Expect = 0.0 Identities = 427/443 (96%), Gaps = 5/443 (1%) Strand = Plus / Plus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110151 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 110210 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 110211 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 110265 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 110266 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 110325 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110326 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 110385 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110386 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 110445 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 110446 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 110505 Query: 400 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 459 |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| Sbjct: 110506 gcaaactctgaatactagatatgacctccaaataataggggtcaaggtcggccagtgaga 110565 Query: 460 cgatgggggataagcttcatcgt 482 ||||||||||||||||||||||| Sbjct: 110566 cgatgggggataagcttcatcgt 110588
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 747 bits (377), Expect = 0.0 Identities = 422/437 (96%), Gaps = 5/437 (1%) Strand = Plus / Plus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46818 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 46877 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 46878 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 46932 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 46933 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 46992 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46993 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 47052 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47053 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 47112 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 47113 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 47172 Query: 400 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 459 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 47173 gcaaactctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgaga 47232 Query: 460 cgatgggggataagctt 476 ||||||||||||||||| Sbjct: 47233 cgatgggggataagctt 47249
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 743 bits (375), Expect = 0.0 Identities = 426/443 (96%), Gaps = 5/443 (1%) Strand = Plus / Minus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 134997 ctctgaccgcgtgcctgttgaagaatgagccggcgactaataggcagtggcttggttaag 134938 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 134937 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 134883 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 134882 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 134823 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134822 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 134763 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134762 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 134703 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 134702 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 134643 Query: 400 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 459 |||||||||||||| ||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 134642 gcaaactctgaataatagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 134583 Query: 460 cgatgggggataagcttcatcgt 482 ||||||||||||||||||||||| Sbjct: 134582 cgatgggggataagcttcatcgt 134560 Score = 743 bits (375), Expect = 0.0 Identities = 426/443 (96%), Gaps = 5/443 (1%) Strand = Plus / Plus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 106065 ctctgaccgcgtgcctgttgaagaatgagccggcgactaataggcagtggcttggttaag 106124 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106125 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 106179 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106180 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 106239 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106240 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 106299 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106300 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 106359 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 106360 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 106419 Query: 400 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 459 |||||||||||||| ||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 106420 gcaaactctgaataatagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 106479 Query: 460 cgatgggggataagcttcatcgt 482 ||||||||||||||||||||||| Sbjct: 106480 cgatgggggataagcttcatcgt 106502
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 735 bits (371), Expect = 0.0 Identities = 425/443 (95%), Gaps = 5/443 (1%) Strand = Plus / Plus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 560 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 619 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 620 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 674 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 675 tatggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaagt 734 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 735 ggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaat 794 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 795 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 854 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 855 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 914 Query: 400 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 459 |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 915 gcaaactctgaatactagatatgacctcaaaataactggggtcaaggtcggccagtgaga 974 Query: 460 cgatgggggataagcttcatcgt 482 || |||||||||||||||||||| Sbjct: 975 cggtgggggataagcttcatcgt 997
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 735 bits (371), Expect = 0.0 Identities = 425/443 (95%), Gaps = 5/443 (1%) Strand = Plus / Minus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132437 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 132378 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 132377 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 132323 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 132322 tatggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaagt 132263 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 132262 ggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaat 132203 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132202 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 132143 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 132142 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 132083 Query: 400 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 459 |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 132082 gcaaactctgaatactagatatgacctcaaaataactggggtcaaggtcggccagtgaga 132023 Query: 460 cgatgggggataagcttcatcgt 482 || |||||||||||||||||||| Sbjct: 132022 cggtgggggataagcttcatcgt 132000 Score = 735 bits (371), Expect = 0.0 Identities = 425/443 (95%), Gaps = 5/443 (1%) Strand = Plus / Plus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104327 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 104386 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 104387 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 104441 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 104442 tatggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaagt 104501 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 104502 ggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaat 104561 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104562 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 104621 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 104622 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 104681 Query: 400 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 459 |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 104682 gcaaactctgaatactagatatgacctcaaaataactggggtcaaggtcggccagtgaga 104741 Query: 460 cgatgggggataagcttcatcgt 482 || |||||||||||||||||||| Sbjct: 104742 cggtgggggataagcttcatcgt 104764
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 735 bits (371), Expect = 0.0 Identities = 425/443 (95%), Gaps = 5/443 (1%) Strand = Plus / Plus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||| Sbjct: 567 ctctgaacgcgtgcctgttgaaaaatgagccggcgactcatacgcagtggcttggttaag 626 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 627 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 681 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 682 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 741 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 742 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 801 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 802 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 861 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 862 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 921 Query: 400 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 459 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 922 gcaaactctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgaga 981 Query: 460 cgatgggggataagcttcatcgt 482 ||||||||||||||||||||||| Sbjct: 982 cgatgggggataagcttcatcgt 1004
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 735 bits (371), Expect = 0.0 Identities = 425/443 (95%), Gaps = 5/443 (1%) Strand = Plus / Plus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 569 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 628 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 ||||| ||||||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 629 ggaac-----ccaccggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgct 683 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 |||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 684 tatggacccgaacctgggtgatctatccatgaccaggatggagcttgggtgaaactaagt 743 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 744 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 803 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 804 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 863 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 864 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 923 Query: 400 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 459 |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 924 gcaaactctgaatactagatatgacctcaaaataacaggggttaaggtcggccagtgaga 983 Query: 460 cgatgggggataagcttcatcgt 482 | ||||||||||||||||||||| Sbjct: 984 caatgggggataagcttcatcgt 1006
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 735 bits (371), Expect = 0.0 Identities = 425/443 (95%), Gaps = 5/443 (1%) Strand = Plus / Minus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131306 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 131247 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 |||| ||||||||||||||||||||||||||||| | ||||| |||||||||||| Sbjct: 131246 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcacagggcaattgtcactgct 131192 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 131191 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 131132 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131131 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 131072 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131071 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 131012 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 | ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 131011 tagacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 130952 Query: 400 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 459 |||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 130951 gcaaactctgaatactagatatgacctcaaaataacaagggtcaaggtcggccagtgaga 130892 Query: 460 cgatgggggataagcttcatcgt 482 ||||||||||||||||||||||| Sbjct: 130891 cgatgggggataagcttcatcgt 130869 Score = 735 bits (371), Expect = 0.0 Identities = 425/443 (95%), Gaps = 5/443 (1%) Strand = Plus / Plus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104088 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 104147 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 |||| ||||||||||||||||||||||||||||| | ||||| |||||||||||| Sbjct: 104148 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcacagggcaattgtcactgct 104202 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 104203 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 104262 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104263 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 104322 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104323 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 104382 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 | ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 104383 tagacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 104442 Query: 400 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 459 |||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 104443 gcaaactctgaatactagatatgacctcaaaataacaagggtcaaggtcggccagtgaga 104502 Query: 460 cgatgggggataagcttcatcgt 482 ||||||||||||||||||||||| Sbjct: 104503 cgatgggggataagcttcatcgt 104525
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 735 bits (371), Expect = 0.0 Identities = 425/443 (95%), Gaps = 5/443 (1%) Strand = Plus / Minus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133398 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 133339 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 133338 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 133284 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 133283 tatggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaagt 133224 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 133223 ggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaat 133164 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133163 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 133104 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 133103 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 133044 Query: 400 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 459 |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 133043 gcaaactctgaatactagatatgacctcaaaataactggggtcaaggtcggccagtgaga 132984 Query: 460 cgatgggggataagcttcatcgt 482 || |||||||||||||||||||| Sbjct: 132983 cggtgggggataagcttcatcgt 132961 Score = 735 bits (371), Expect = 0.0 Identities = 425/443 (95%), Gaps = 5/443 (1%) Strand = Plus / Plus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105251 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105310 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 105311 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 105365 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 105366 tatggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaagt 105425 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 105426 ggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaat 105485 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105486 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 105545 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 105546 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 105605 Query: 400 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 459 |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 105606 gcaaactctgaatactagatatgacctcaaaataactggggtcaaggtcggccagtgaga 105665 Query: 460 cgatgggggataagcttcatcgt 482 || |||||||||||||||||||| Sbjct: 105666 cggtgggggataagcttcatcgt 105688
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 729 bits (368), Expect = 0.0 Identities = 426/444 (95%), Gaps = 6/444 (1%) Strand = Plus / Plus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1056 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 1115 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 1116 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 1170 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1171 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 1230 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1231 gagggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 1290 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1291 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 1350 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 1351 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 1410 Query: 400 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 459 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1411 gcaaactctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgaga 1470 Query: 460 cgat-gggggataagcttcatcgt 482 |||| ||||||||||||||||||| Sbjct: 1471 cgatggggggataagcttcatcgt 1494
>emb|Y08501.2|MIATGENA Arabidopsis thaliana mitochondrial genome Length = 366924 Score = 729 bits (368), Expect = 0.0 Identities = 426/444 (95%), Gaps = 6/444 (1%) Strand = Plus / Plus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364743 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 364802 Query: 100 ggaacggaacccaccggagccgtagcgaaag-cgagtcttaatagggcgattgtcactgc 158 ||||| ||||||||||||||||||||| |||||||| ||||||| ||||||||||| Sbjct: 364803 ggaac-----ccaccggagccgtagcgaaaggcgagtcttcatagggcaattgtcactgc 364857 Query: 159 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 218 |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 364858 ttatggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaag 364917 Query: 219 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 278 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 364918 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaa 364977 Query: 279 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 338 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364978 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 365037 Query: 339 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 398 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 365038 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 365097 Query: 399 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 458 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 365098 ggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgag 365157 Query: 459 acgatgggggataagcttcatcgt 482 ||| |||||||||||||||||||| Sbjct: 365158 acggtgggggataagcttcatcgt 365181
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 724 bits (365), Expect = 0.0 Identities = 428/445 (96%), Gaps = 8/445 (1%) Strand = Plus / Plus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2329 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 2388 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 2389 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 2443 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 2444 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 2503 Query: 220 agagg-tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 278 |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2504 ggagggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 2563 Query: 279 tg-ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 337 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2564 tggccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 2623 Query: 338 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 397 ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 2624 actggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcg 2683 Query: 398 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 457 ||||||||||||||||||||||||||| | |||||||||||||||||||||||| ||||| Sbjct: 2684 aggcaaactctgaatactagatatgactc-aaaataacaggggtcaaggtcggctagtga 2742 Query: 458 gacgatgggggataagcttcatcgt 482 ||||||||||||||||||||||||| Sbjct: 2743 gacgatgggggataagcttcatcgt 2767
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 720 bits (363), Expect = 0.0 Identities = 424/445 (95%), Gaps = 12/445 (2%) Strand = Plus / Minus Query: 38 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 97 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134425 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 134366 Query: 98 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 157 ||||||| ||||||||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 134365 agggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactg 134311 Query: 158 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 217 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 134310 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 134251 Query: 218 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 277 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134250 gtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 134191 Query: 278 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134190 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 134131 Query: 338 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 397 ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 134130 actggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcg 134071 Query: 398 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 457 |||||||||||||||||||||||||| || ||| |||||||||||||||||||| Sbjct: 134070 aggcaaactctgaatactagatatgatcccaaa-------gggtcaaggtcggccagtga 134018 Query: 458 gacgatgggggataagcttcatcgt 482 ||||||||||||||||||||||||| Sbjct: 134017 gacgatgggggataagcttcatcgt 133993 Score = 720 bits (363), Expect = 0.0 Identities = 424/445 (95%), Gaps = 12/445 (2%) Strand = Plus / Plus Query: 38 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 97 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105857 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 105916 Query: 98 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 157 ||||||| ||||||||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 105917 agggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactg 105971 Query: 158 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 217 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 105972 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 106031 Query: 218 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 277 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106032 gtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 106091 Query: 278 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106092 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 106151 Query: 338 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 397 ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 106152 actggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcg 106211 Query: 398 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 457 |||||||||||||||||||||||||| || ||| |||||||||||||||||||| Sbjct: 106212 aggcaaactctgaatactagatatgatcccaaa-------gggtcaaggtcggccagtga 106264 Query: 458 gacgatgggggataagcttcatcgt 482 ||||||||||||||||||||||||| Sbjct: 106265 gacgatgggggataagcttcatcgt 106289
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 720 bits (363), Expect = 0.0 Identities = 423/443 (95%), Gaps = 5/443 (1%) Strand = Plus / Minus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 129969 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggtagtggcttggttaag 129910 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 129909 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 129855 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 129854 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 129795 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129794 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 129735 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129734 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 129675 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 129674 cggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 129615 Query: 400 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 459 |||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||| Sbjct: 129614 gcaaactctgaatactagatatgacctgaaaataataagggtcaaggtcggccagtgaga 129555 Query: 460 cgatgggggataagcttcatcgt 482 ||||| ||||||||||||||||| Sbjct: 129554 cgatgagggataagcttcatcgt 129532 Score = 720 bits (363), Expect = 0.0 Identities = 423/443 (95%), Gaps = 5/443 (1%) Strand = Plus / Plus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 102487 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggtagtggcttggttaag 102546 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 102547 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 102601 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 102602 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 102661 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102662 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 102721 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102722 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 102781 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 102782 cggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 102841 Query: 400 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 459 |||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||| Sbjct: 102842 gcaaactctgaatactagatatgacctgaaaataataagggtcaaggtcggccagtgaga 102901 Query: 460 cgatgggggataagcttcatcgt 482 ||||| ||||||||||||||||| Sbjct: 102902 cgatgagggataagcttcatcgt 102924
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 694 bits (350), Expect = 0.0 Identities = 421/443 (95%), Gaps = 5/443 (1%) Strand = Plus / Plus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||| ||||||||||||||| ||||| ||| ||| ||||| |||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaaaaatgacccg-cgaatcataagcagtggcttggttaac 639 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 || ||||||||||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 640 gg----gaacccaccggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgct 695 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 696 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 755 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 756 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 815 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 816 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 875 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 876 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 935 Query: 400 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 459 |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 936 gcaaactctgaatactagatatgacctcaaaataacaggggttaaggtcggccagtgaga 995 Query: 460 cgatgggggataagcttcatcgt 482 ||||||||||||||||||||||| Sbjct: 996 cgatgggggataagcttcatcgt 1018
>gb|AY848693.1| Vitis pseudoreticulata clone EST-4 23S ribosomal RNA, partial sequence; chloroplast Length = 673 Score = 692 bits (349), Expect = 0.0 Identities = 419/443 (94%), Gaps = 12/443 (2%) Strand = Plus / Plus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 160 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 161 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 220 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 221 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 280 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 281 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcggttgac 340 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 341 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 400 Query: 400 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 459 |||||||||||||||||||| || || |||| ||||||||||||||||||||| Sbjct: 401 gcaaactctgaatactagatctggcctcaaaa-------ggtcaaggtcggccagtgaga 453 Query: 460 cgatgggggataagcttcatcgt 482 ||||||||||||||||||||||| Sbjct: 454 cgatgggggataagcttcatcgt 476
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 692 bits (349), Expect = 0.0 Identities = 419/443 (94%), Gaps = 12/443 (2%) Strand = Plus / Minus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139799 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139740 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 139739 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 139685 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 139684 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 139625 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139624 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 139565 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 139564 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcggttgac 139505 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 139504 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 139445 Query: 400 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 459 |||||||||||||||||||| || || |||| ||||||||||||||||||||| Sbjct: 139444 gcaaactctgaatactagatctggcctcaaaa-------ggtcaaggtcggccagtgaga 139392 Query: 460 cgatgggggataagcttcatcgt 482 ||||||||||||||||||||||| Sbjct: 139391 cgatgggggataagcttcatcgt 139369 Score = 692 bits (349), Expect = 0.0 Identities = 419/443 (94%), Gaps = 12/443 (2%) Strand = Plus / Plus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110261 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 110320 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 110321 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 110375 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 110376 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 110435 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110436 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 110495 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 110496 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcggttgac 110555 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 110556 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 110615 Query: 400 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 459 |||||||||||||||||||| || || |||| ||||||||||||||||||||| Sbjct: 110616 gcaaactctgaatactagatctggcctcaaaa-------ggtcaaggtcggccagtgaga 110668 Query: 460 cgatgggggataagcttcatcgt 482 ||||||||||||||||||||||| Sbjct: 110669 cgatgggggataagcttcatcgt 110691
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 690 bits (348), Expect = 0.0 Identities = 421/444 (94%), Gaps = 6/444 (1%) Strand = Plus / Minus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 52125 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagcggcttggttaag 52066 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 ||||| ||||||||||| |||||||||||||| || ||||||| |||||||||||| Sbjct: 52065 ggaac-----ccaccggagccatagcgaaagcgagtattcatagggcaattgtcactgct 52011 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 52010 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 51951 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51950 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 51891 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51890 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 51831 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 |||||||||||||||||||||||||||| |||||||| | | ||||||||||||||||| Sbjct: 51830 tggacatctaggggtaaagcactgtttcagtgcgggccgtgagagcggtaccaaatcgaa 51771 Query: 400 gcaaactctgaatactag-atatgacccaaaaataacaggggtcaaggtcggccagtgag 458 |||||||||||||||||| |||||||| | |||||| |||||| |||||||||||||||| Sbjct: 51770 gcaaactctgaatactagaatatgacctacaaataataggggtaaaggtcggccagtgag 51711 Query: 459 acgatgggggataagcttcatcgt 482 |||||||||||||||||||||||| Sbjct: 51710 acgatgggggataagcttcatcgt 51687 Score = 690 bits (348), Expect = 0.0 Identities = 421/444 (94%), Gaps = 6/444 (1%) Strand = Plus / Plus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 37703 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagcggcttggttaag 37762 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 ||||| ||||||||||| |||||||||||||| || ||||||| |||||||||||| Sbjct: 37763 ggaac-----ccaccggagccatagcgaaagcgagtattcatagggcaattgtcactgct 37817 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 37818 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 37877 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37878 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 37937 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37938 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 37997 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 |||||||||||||||||||||||||||| |||||||| | | ||||||||||||||||| Sbjct: 37998 tggacatctaggggtaaagcactgtttcagtgcgggccgtgagagcggtaccaaatcgaa 38057 Query: 400 gcaaactctgaatactag-atatgacccaaaaataacaggggtcaaggtcggccagtgag 458 |||||||||||||||||| |||||||| | |||||| |||||| |||||||||||||||| Sbjct: 38058 gcaaactctgaatactagaatatgacctacaaataataggggtaaaggtcggccagtgag 38117 Query: 459 acgatgggggataagcttcatcgt 482 |||||||||||||||||||||||| Sbjct: 38118 acgatgggggataagcttcatcgt 38141
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 690 bits (348), Expect = 0.0 Identities = 421/444 (94%), Gaps = 6/444 (1%) Strand = Plus / Plus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 560 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagcggcttggttaag 619 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 ||||| ||||||||||| |||||||||||||| || ||||| | |||||||||||| Sbjct: 620 ggaac-----ccaccggagccatagcgaaagcgagtattcataggactattgtcactgct 674 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 675 tatggacccgaacctgggtgatctatccatgaccaggatgaagctttggtgaaactaagt 734 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 735 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 794 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 795 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 854 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 |||||||||||||||||||||||||||| |||||||| | | ||||||||||||||||| Sbjct: 855 tggacatctaggggtaaagcactgtttcagtgcgggccgtgagagcggtaccaaatcgaa 914 Query: 400 gcaaactctgaatactag-atatgacccaaaaataacaggggtcaaggtcggccagtgag 458 |||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||||| Sbjct: 915 gcaaactctgaatactagaatatgacctaaaaataacaggggtaaaggtcggccagtgag 974 Query: 459 acgatgggggataagcttcatcgt 482 |||||||||||||||||||||||| Sbjct: 975 acgatgggggataagcttcatcgt 998
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 690 bits (348), Expect = 0.0 Identities = 422/444 (95%), Gaps = 7/444 (1%) Strand = Plus / Plus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaa-aatgagccggcgactcataggaagtggcttggttaag 639 Query: 100 ggaacggaacccaccgga-gccgtagcgaaagcgagtcttaatagggcgattgtcactgc 158 ||||| |||||||| ||||||||||||||||||||| |||||| ||||||||||| Sbjct: 640 ggaac-----ccaccggaagccgtagcgaaagcgagtcttcgtagggcaattgtcactgc 694 Query: 159 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 218 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 695 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 754 Query: 219 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 278 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 755 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 814 Query: 279 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 338 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 815 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 874 Query: 339 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 398 ||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 875 ctggacatctaagggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 934 Query: 399 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 458 |||||||||||||||||| |||||||| |||||||||||||| |||||||||||||||| Sbjct: 935 ggcaaactctgaatactaaatatgacctcaaaataacaggggttaaggtcggccagtgag 994 Query: 459 acgatgggggataagcttcatcgt 482 |||||||||||||||||||||||| Sbjct: 995 acgatgggggataagcttcatcgt 1018
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 690 bits (348), Expect = 0.0 Identities = 422/444 (95%), Gaps = 7/444 (1%) Strand = Plus / Plus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177405 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 177464 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 177465 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 177519 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 177520 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 177579 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 177580 ggaggtccga-ccgactgatgttgaagaatcagcgggtgagttgtggttaggggtgaaat 177638 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177639 gccactcgcacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 177698 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 |||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||| Sbjct: 177699 tggacatctaggggtaaagcacggtttcggtgcgggccgcgagagcggtaccaaatcgag 177758 Query: 400 gcaaactctgaatactagatatgacccaaaaataaca-ggggtcaaggtcggccagtgag 458 |||||||||||||||||||||||||| ||||||| | |||| |||||||||| |||||| Sbjct: 177759 gcaaactctgaatactagatatgacctcaaaataagaggggggcaaggtcggctagtgag 177818 Query: 459 acgatgggggataagcttcatcgt 482 |||||||||||||||||||||||| Sbjct: 177819 acgatgggggataagcttcatcgt 177842
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 690 bits (348), Expect = 0.0 Identities = 421/444 (94%), Gaps = 6/444 (1%) Strand = Plus / Plus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 4631 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagcggcttggttaag 4690 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 ||||| ||||||||||| |||||||||||||| || ||||||| |||||||||||| Sbjct: 4691 ggaac-----ccaccggagccatagcgaaagcgagtattcatagggcaattgtcactgct 4745 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 4746 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 4805 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4806 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 4865 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4866 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 4925 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 |||||||||||||||||||||||||||| |||||||| | | ||||||||||||||||| Sbjct: 4926 tggacatctaggggtaaagcactgtttcagtgcgggccgtgagagcggtaccaaatcgaa 4985 Query: 400 gcaaactctgaatactag-atatgacccaaaaataacaggggtcaaggtcggccagtgag 458 |||||||||||||||||| |||||||| | |||||| |||||| |||||||||||||||| Sbjct: 4986 gcaaactctgaatactagaatatgacctacaaataataggggtaaaggtcggccagtgag 5045 Query: 459 acgatgggggataagcttcatcgt 482 |||||||||||||||||||||||| Sbjct: 5046 acgatgggggataagcttcatcgt 5069
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 688 bits (347), Expect = 0.0 Identities = 420/443 (94%), Gaps = 6/443 (1%) Strand = Plus / Plus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||| |||||||||||| || ||||||||| ||||||||||| ||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgtttaaaaatgagccg-cgactcataggaagtggcttggttaag 639 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 ||||| ||| ||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 640 ggaac-----ccaacggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgct 694 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 695 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 754 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 755 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 814 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 815 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 874 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 875 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 934 Query: 400 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 459 |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 935 gcaaactctgaatactagatatgacctcaaaataacaggggttaaggtcggccagtgaga 994 Query: 460 cgatgggggataagcttcatcgt 482 | ||||||||||||||||||||| Sbjct: 995 ccatgggggataagcttcatcgt 1017
>gb|DQ176643.1| Vitis pseudoreticulata clone EST-423 23S ribosomal RNA, partial sequence; chloroplast Length = 674 Score = 684 bits (345), Expect = 0.0 Identities = 418/443 (94%), Gaps = 12/443 (2%) Strand = Plus / Plus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 121 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 122 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 176 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 177 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 236 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 237 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 296 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 297 gccgctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcggttgac 356 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 357 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 416 Query: 400 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 459 |||||||||||||||||||| || || |||| ||||||||||||||||||||| Sbjct: 417 gcaaactctgaatactagatctggcctcaaaa-------ggtcaaggtcggccagtgaga 469 Query: 460 cgatgggggataagcttcatcgt 482 ||||||||||||||||||||||| Sbjct: 470 cgatgggggataagcttcatcgt 492
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 676 bits (341), Expect = 0.0 Identities = 392/409 (95%), Gaps = 5/409 (1%) Strand = Plus / Plus Query: 74 gactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcga 133 ||||||||| |||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 592 gactcatagtaagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcga 646 Query: 134 gtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacc 193 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 647 gtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgacc 706 Query: 194 aggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagc 253 |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 707 aggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagc 766 Query: 254 ggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccg 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 767 ggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccg 826 Query: 314 aaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 827 aaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcg 886 Query: 374 ggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaata 433 ||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 887 ggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaata 946 Query: 434 acaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgt 482 |||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 947 acaggggttaaggtcggccagtgagacgatgggggataagcttcatcgt 995
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 670 bits (338), Expect = 0.0 Identities = 368/378 (97%) Strand = Plus / Plus Query: 105 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 164 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 602 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 661 Query: 165 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 224 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 662 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 721 Query: 225 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 284 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 722 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 781 Query: 285 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 344 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 782 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 841 Query: 345 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 404 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 842 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 901 Query: 405 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 464 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 902 ctctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgagacgatg 961 Query: 465 ggggataagcttcatcgt 482 |||||||||||||||||| Sbjct: 962 ggggataagcttcatcgt 979
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 670 bits (338), Expect = 0.0 Identities = 415/441 (94%), Gaps = 11/441 (2%) Strand = Plus / Plus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaagaattaaccggcgactcataggcagtggcttggttaag 640 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 ||||| ||||||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 641 ggaac-----ccaccggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgct 695 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 696 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 755 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 756 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 815 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 816 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 875 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 ||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||| Sbjct: 876 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcagtaccaaatcgag 935 Query: 400 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 459 |||||||||||||||||||||||||| | |||||||| ||||||||||| ||||| Sbjct: 936 gcaaactctgaatactagatatgacc------tcacaggggttaaggtcggccaatgaga 989 Query: 460 cgatgggggataagcttcatc 480 ||||||||||||||||||||| Sbjct: 990 cgatgggggataagcttcatc 1010
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 664 bits (335), Expect = 0.0 Identities = 421/447 (94%), Gaps = 7/447 (1%) Strand = Plus / Plus Query: 38 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 97 |||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||| Sbjct: 561 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataggtagtggcctggtta 620 Query: 98 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 157 ||||||| ||||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 621 agggaac-----ccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcacta 675 Query: 158 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 217 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 676 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 735 Query: 218 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 277 | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 736 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaa 795 Query: 278 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 796 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 855 Query: 338 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 396 ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 856 actggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatc 915 Query: 397 gaggcaaactctgaatactagatatgacccaaaaataacagggg-tcaaggtcggccagt 455 ||||||||||||||||||||||||||| || |||||||||||| | |||||| ||||| Sbjct: 916 gaggcaaactctgaatactagatatgatccccaaataacaggggataaaggtcaaccagt 975 Query: 456 gagacgatgggggataagcttcatcgt 482 |||||| |||||||||||||||||||| Sbjct: 976 gagacggtgggggataagcttcatcgt 1002
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 644 bits (325), Expect = 0.0 Identities = 419/447 (93%), Gaps = 10/447 (2%) Strand = Plus / Plus Query: 37 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 96 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 86823 gatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggtt 86882 Query: 97 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 156 |||||||| |||||||||||||||||| |||||||||| || |||| ||||||||| Sbjct: 86883 aagggaac-----ccaccggagccgtagcgagagcgagtcttcatggggcaattgtcact 86937 Query: 157 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 216 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 86938 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 86997 Query: 217 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 276 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 86998 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 87057 Query: 277 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 336 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87058 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 87117 Query: 337 gactgga-catctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 395 ||||||| ||||||||||||||||||||||||||| ||||| ||| |||||||||||||| Sbjct: 87118 gactggaccatctaggggtaaagcactgtttcggtacgggccgcgagagcggtaccaaat 87177 Query: 396 cgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagt 455 |||||||||||||||||||||||| || ||| ||||| |||||| | |||| ||||| Sbjct: 87178 cgaggcaaactctgaatactagat-tgcccc---aataaaaggggtaagggtcaaccagt 87233 Query: 456 gagacgatgggggataagcttcatcgt 482 ||||||||||||||||||||||||||| Sbjct: 87234 gagacgatgggggataagcttcatcgt 87260
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 640 bits (323), Expect = 0.0 Identities = 418/447 (93%), Gaps = 7/447 (1%) Strand = Plus / Minus Query: 38 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 97 |||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||| Sbjct: 117588 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataggtagtggcctggtta 117529 Query: 98 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 157 ||||||| ||||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 117528 agggaac-----ccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcacta 117474 Query: 158 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 217 ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| Sbjct: 117473 cttatggacccgaacctgggtgatctaaccatgaccaggatgaagcttgggtgaaactaa 117414 Query: 218 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 277 | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 117413 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaa 117354 Query: 278 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117353 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 117294 Query: 338 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 396 ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 117293 actggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatc 117234 Query: 397 gaggcaaactctgaatactagatatgacccaaaaataaca-ggggtcaaggtcggccagt 455 ||||||||||||||||||||||||||| || |||||| | ||||| | |||| ||||| Sbjct: 117233 gaggcaaactctgaatactagatatgatccccaaataatagggggtaatggtcaaccagt 117174 Query: 456 gagacgatgggggataagcttcatcgt 482 |||||| |||||||||||||||||||| Sbjct: 117173 gagacggtgggggataagcttcatcgt 117147 Score = 640 bits (323), Expect = 0.0 Identities = 418/447 (93%), Gaps = 7/447 (1%) Strand = Plus / Plus Query: 38 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 97 |||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||| Sbjct: 90514 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataggtagtggcctggtta 90573 Query: 98 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 157 ||||||| ||||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 90574 agggaac-----ccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcacta 90628 Query: 158 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 217 ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| Sbjct: 90629 cttatggacccgaacctgggtgatctaaccatgaccaggatgaagcttgggtgaaactaa 90688 Query: 218 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 277 | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 90689 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaa 90748 Query: 278 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90749 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 90808 Query: 338 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 396 ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 90809 actggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatc 90868 Query: 397 gaggcaaactctgaatactagatatgacccaaaaataaca-ggggtcaaggtcggccagt 455 ||||||||||||||||||||||||||| || |||||| | ||||| | |||| ||||| Sbjct: 90869 gaggcaaactctgaatactagatatgatccccaaataatagggggtaatggtcaaccagt 90928 Query: 456 gagacgatgggggataagcttcatcgt 482 |||||| |||||||||||||||||||| Sbjct: 90929 gagacggtgggggataagcttcatcgt 90955
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 636 bits (321), Expect = e-179 Identities = 436/470 (92%), Gaps = 12/470 (2%) Strand = Plus / Minus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||| ||| |||| |||||||||||||||||||||||||||||||||||| | Sbjct: 146016 cagtgggaggagaatcggatccctgaccgcgtgcctgttgaagaatgagccggcgactta 145957 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 139 ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 145956 taggcagtggcctggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttc 145902 Query: 140 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 199 |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 145901 ctagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 145842 Query: 200 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 259 |||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 145841 aagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatga 145782 Query: 260 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 319 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 145781 gttgtggttaggggtgaaatgccaatcgaacccagagctagctggttctccccgaaatgc 145722 Query: 320 gttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctg 378 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 145721 gttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcggtgcgggctg 145662 Query: 379 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatga--cccaa---aaata 433 || |||||||||||||||||||||||||||||||||||| ||||| |||| ||| | Sbjct: 145661 cgagagcggtaccaaatcgaggcaaactctgaatactaggtatgatctccaaatgaaaga 145602 Query: 434 acagg-ggtcaaggtcggccagtgagacgatgggggataagcttcatcgt 482 ||||| ||| |||||| |||||||||||| |||||||||||||||||||| Sbjct: 145601 acaggaggtaaaggtcagccagtgagacggtgggggataagcttcatcgt 145552 Score = 636 bits (321), Expect = e-179 Identities = 436/470 (92%), Gaps = 12/470 (2%) Strand = Plus / Plus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||| ||| |||| |||||||||||||||||||||||||||||||||||| | Sbjct: 112446 cagtgggaggagaatcggatccctgaccgcgtgcctgttgaagaatgagccggcgactta 112505 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 139 ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 112506 taggcagtggcctggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttc 112560 Query: 140 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 199 |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112561 ctagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 112620 Query: 200 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 259 |||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 112621 aagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatga 112680 Query: 260 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 319 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 112681 gttgtggttaggggtgaaatgccaatcgaacccagagctagctggttctccccgaaatgc 112740 Query: 320 gttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctg 378 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 112741 gttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcggtgcgggctg 112800 Query: 379 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatga--cccaa---aaata 433 || |||||||||||||||||||||||||||||||||||| ||||| |||| ||| | Sbjct: 112801 cgagagcggtaccaaatcgaggcaaactctgaatactaggtatgatctccaaatgaaaga 112860 Query: 434 acagg-ggtcaaggtcggccagtgagacgatgggggataagcttcatcgt 482 ||||| ||| |||||| |||||||||||| |||||||||||||||||||| Sbjct: 112861 acaggaggtaaaggtcagccagtgagacggtgggggataagcttcatcgt 112910
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 624 bits (315), Expect = e-176 Identities = 387/407 (95%), Gaps = 8/407 (1%) Strand = Plus / Plus Query: 80 taggcagtggcttggttaa-gggaacggaacccaccggagccgtagcgaaagcgagtctt 138 ||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||| Sbjct: 613 taggcagtggcttggttaaagggaac----cccaccggaaccgtagcgaaagcgagtctt 668 Query: 139 aatagggcgattgtcactgcttatggacccgaacct--gggtgatctatccatgaccagg 196 ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 669 catagggcaattgtcactgcttatggacccgaaccctggggtgatctatccatgaccagg 728 Query: 197 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 256 ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 729 atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcgga 788 Query: 257 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcccc-gaa 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 789 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcccccgaa 848 Query: 316 atgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcggg 375 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 849 atgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcggg 908 Query: 376 ctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataac 435 | ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 909 ccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctaaaaataac 968 Query: 436 aggggtcaaggtcggccagtgagacgatgggggataagcttcatcgt 482 | |||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 969 aagggtcaaggtcggcaagtgagacgatgggggataagcttcatcgt 1015
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 622 bits (314), Expect = e-175 Identities = 365/382 (95%), Gaps = 5/382 (1%) Strand = Plus / Plus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4791 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 4850 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 4851 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggctattgtcactgct 4905 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 4906 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttaggtgaaactaagt 4965 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| Sbjct: 4966 ggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaat 5025 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5026 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 5085 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 |||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||| Sbjct: 5086 tggacatctaggggtaaagcactgtttcggcgcgggccgcgagagcggtaccaaatcgag 5145 Query: 400 gcaaactctgaatactagatat 421 |||||||||||||||||||||| Sbjct: 5146 gcaaactctgaatactagatat 5167 Score = 73.8 bits (37), Expect = 5e-10 Identities = 37/37 (100%) Strand = Plus / Plus Query: 446 gtcggccagtgagacgatgggggataagcttcatcgt 482 ||||||||||||||||||||||||||||||||||||| Sbjct: 5182 gtcggccagtgagacgatgggggataagcttcatcgt 5218
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 622 bits (314), Expect = e-175 Identities = 365/382 (95%), Gaps = 5/382 (1%) Strand = Plus / Minus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23134 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 23075 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 23074 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggctattgtcactgct 23020 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 23019 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttaggtgaaactaagt 22960 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| Sbjct: 22959 ggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaat 22900 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22899 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 22840 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 |||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||| Sbjct: 22839 tggacatctaggggtaaagcactgtttcggcgcgggccgcgagagcggtaccaaatcgag 22780 Query: 400 gcaaactctgaatactagatat 421 |||||||||||||||||||||| Sbjct: 22779 gcaaactctgaatactagatat 22758 Score = 73.8 bits (37), Expect = 5e-10 Identities = 37/37 (100%) Strand = Plus / Minus Query: 446 gtcggccagtgagacgatgggggataagcttcatcgt 482 ||||||||||||||||||||||||||||||||||||| Sbjct: 22743 gtcggccagtgagacgatgggggataagcttcatcgt 22707
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 618 bits (312), Expect = e-174 Identities = 416/447 (93%), Gaps = 9/447 (2%) Strand = Plus / Plus Query: 37 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 96 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 88909 gatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggtt 88968 Query: 97 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 156 |||||||| |||||||||||||||||| |||||||||| || |||| ||||||||| Sbjct: 88969 aagggaac-----ccaccggagccgtagcgagagcgagtcttcatggggcaattgtcact 89023 Query: 157 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 216 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 89024 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 89083 Query: 217 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 276 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 89084 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 89143 Query: 277 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 336 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89144 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 89203 Query: 337 gactgga-catctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 395 ||||||| ||||||||||||||||||||||||||| ||||| || |||||||||||||| Sbjct: 89204 gactggaccatctaggggtaaagcactgtttcggtacgggccacgagagcggtaccaaat 89263 Query: 396 cgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagt 455 |||||||||||||||||||||||| | ||||| | || ||||| | |||| ||||| Sbjct: 89264 cgaggcaaactctgaatactagat-taccccaata--aaagggggtaagggtcaaccagt 89320 Query: 456 gagacgatgggggataagcttcatcgt 482 ||||||||||||||||||||||||||| Sbjct: 89321 gagacgatgggggataagcttcatcgt 89347
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 617 bits (311), Expect = e-173 Identities = 368/387 (95%), Gaps = 5/387 (1%) Strand = Plus / Plus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5059 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 5118 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 5119 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggctattgtcactgct 5173 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 ||||||||||||||||||||||||||||||||||||||||||| || | |||||||||| Sbjct: 5174 tatggacccgaacctgggtgatctatccatgaccaggatgaagtttaggtgaaactaagt 5233 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| Sbjct: 5234 ggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaat 5293 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5294 gccaatcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 5353 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 |||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||| Sbjct: 5354 tggacatctaggggtaaagcactgtttcggcgcgggccgcgagagcggtaccaaatcgag 5413 Query: 400 gcaaactctgaatactagatatgaccc 426 ||||||||||||||||||||||||||| Sbjct: 5414 gcaaactctgaatactagatatgaccc 5440 Score = 85.7 bits (43), Expect = 1e-13 Identities = 43/43 (100%) Strand = Plus / Plus Query: 438 gggtcaaggtcggccagtgagacgatgggggataagcttcatc 480 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5445 gggtcaaggtcggccagtgagacgatgggggataagcttcatc 5487
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 617 bits (311), Expect = e-173 Identities = 368/387 (95%), Gaps = 5/387 (1%) Strand = Plus / Plus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5059 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 5118 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 5119 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggctattgtcactgct 5173 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 ||||||||||||||||||||||||||||||||||||||||||| || | |||||||||| Sbjct: 5174 tatggacccgaacctgggtgatctatccatgaccaggatgaagtttaggtgaaactaagt 5233 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| Sbjct: 5234 ggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaat 5293 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5294 gccaatcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 5353 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 |||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||| Sbjct: 5354 tggacatctaggggtaaagcactgtttcggcgcgggccgcgagagcggtaccaaatcgag 5413 Query: 400 gcaaactctgaatactagatatgaccc 426 ||||||||||||||||||||||||||| Sbjct: 5414 gcaaactctgaatactagatatgaccc 5440 Score = 85.7 bits (43), Expect = 1e-13 Identities = 43/43 (100%) Strand = Plus / Plus Query: 438 gggtcaaggtcggccagtgagacgatgggggataagcttcatc 480 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5445 gggtcaaggtcggccagtgagacgatgggggataagcttcatc 5487
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 613 bits (309), Expect = e-172 Identities = 364/381 (95%), Gaps = 6/381 (1%) Strand = Plus / Minus Query: 38 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 97 |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 115650 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtta 115591 Query: 98 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 157 ||||| | ||||||||||||||||||||||||||||| |||||| |||||||||| Sbjct: 115590 agggagc-----ccaccggagccgtagcgaaagcgagtcttcttagggcaattgtcactg 115536 Query: 158 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 217 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 115535 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 115476 Query: 218 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 277 | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 115475 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaa 115416 Query: 278 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 115415 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 115356 Query: 338 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 396 ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 115355 actggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatc 115296 Query: 397 gaggcaaactctgaatactag 417 ||||||||||||||||||||| Sbjct: 115295 gaggcaaactctgaatactag 115275 Score = 613 bits (309), Expect = e-172 Identities = 364/381 (95%), Gaps = 6/381 (1%) Strand = Plus / Plus Query: 38 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 97 |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 86470 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtta 86529 Query: 98 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 157 ||||| | ||||||||||||||||||||||||||||| |||||| |||||||||| Sbjct: 86530 agggagc-----ccaccggagccgtagcgaaagcgagtcttcttagggcaattgtcactg 86584 Query: 158 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 217 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 86585 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 86644 Query: 218 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 277 | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 86645 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaa 86704 Query: 278 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86705 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 86764 Query: 338 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 396 ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 86765 actggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatc 86824 Query: 397 gaggcaaactctgaatactag 417 ||||||||||||||||||||| Sbjct: 86825 gaggcaaactctgaatactag 86845 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Minus Query: 445 ggtcggccagtgagacgatgggggataagcttcat 479 |||| ||||||||||| ||||||||||||||||| Sbjct: 115246 ggtcagccagtgagacagtgggggataagcttcat 115212 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Plus Query: 445 ggtcggccagtgagacgatgggggataagcttcat 479 |||| ||||||||||| ||||||||||||||||| Sbjct: 86874 ggtcagccagtgagacagtgggggataagcttcat 86908
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 613 bits (309), Expect = e-172 Identities = 428/465 (92%), Gaps = 7/465 (1%) Strand = Plus / Plus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct: 543 cagtgggaggagaatcggatctctgaccgcgtgcctgttgaagaatgagccggcgactta 602 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 139 |||| |||||| |||||||||| || ||||||||||||||||||||||||||||| Sbjct: 603 taggtagtggcctggttaaggggac-----ccaccggagccgtagcgaaagcgagtcttc 657 Query: 140 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 199 | |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 658 ctggggcaattgtcactacttatggacccgaacctgggtgatctatccatgaccaggatg 717 Query: 200 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 259 ||||| || |||||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 718 aagctcgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatga 777 Query: 260 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 778 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 837 Query: 320 gttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctg 378 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 838 gttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcggtgcgggctg 897 Query: 379 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 438 || |||||||||||||||||||||||||||||||||||||||||| | |||||| || Sbjct: 898 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgatctccgaataacggg 957 Query: 439 gg-tcaaggtcggccagtgagacgatgggggataagcttcatcgt 482 || | | |||| ||||||||||| |||||||||||||||||||| Sbjct: 958 ggataagggtcaaccagtgagacggtgggggataagcttcatcgt 1002
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 609 bits (307), Expect = e-171 Identities = 368/387 (95%), Gaps = 6/387 (1%) Strand = Plus / Plus Query: 37 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 96 ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct: 4449 gatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtt 4508 Query: 97 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 156 ||||||| |||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 4509 aagggaatt-----caccggagccgtagcgaaagcgagtcttcctagggcaattgtcact 4563 Query: 157 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 216 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 4564 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 4623 Query: 217 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 276 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 4624 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 4683 Query: 277 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 336 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4684 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 4743 Query: 337 gactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 395 |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 4744 gactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaat 4803 Query: 396 cgaggcaaactctgaatactagatatg 422 |||||||||||||||||||||| |||| Sbjct: 4804 cgaggcaaactctgaatactaggtatg 4830 Score = 60.0 bits (30), Expect = 7e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 445 ggtcggccagtgagacgatgggggataagcttcatcgt 482 |||| |||||||||||| |||||||||||||||||||| Sbjct: 4858 ggtcagccagtgagacggtgggggataagcttcatcgt 4895
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 609 bits (307), Expect = e-171 Identities = 368/387 (95%), Gaps = 6/387 (1%) Strand = Plus / Plus Query: 37 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 96 ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct: 559 gatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtt 618 Query: 97 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 156 ||||||| |||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 619 aagggaatt-----caccggagccgtagcgaaagcgagtcttcctagggcaattgtcact 673 Query: 157 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 216 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 674 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 733 Query: 217 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 276 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 734 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 793 Query: 277 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 336 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 794 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 853 Query: 337 gactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 395 |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 854 gactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaat 913 Query: 396 cgaggcaaactctgaatactagatatg 422 |||||||||||||||||||||| |||| Sbjct: 914 cgaggcaaactctgaatactaggtatg 940 Score = 60.0 bits (30), Expect = 7e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 445 ggtcggccagtgagacgatgggggataagcttcatcgt 482 |||| |||||||||||| |||||||||||||||||||| Sbjct: 968 ggtcagccagtgagacggtgggggataagcttcatcgt 1005
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 609 bits (307), Expect = e-171 Identities = 368/387 (95%), Gaps = 6/387 (1%) Strand = Plus / Minus Query: 37 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 96 ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct: 150686 gatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtt 150627 Query: 97 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 156 ||||||| |||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 150626 aagggaatt-----caccggagccgtagcgaaagcgagtcttcctagggcaattgtcact 150572 Query: 157 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 216 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 150571 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 150512 Query: 217 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 276 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 150511 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 150452 Query: 277 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 336 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150451 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 150392 Query: 337 gactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 395 |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 150391 gactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaat 150332 Query: 396 cgaggcaaactctgaatactagatatg 422 |||||||||||||||||||||| |||| Sbjct: 150331 cgaggcaaactctgaatactaggtatg 150305 Score = 609 bits (307), Expect = e-171 Identities = 368/387 (95%), Gaps = 6/387 (1%) Strand = Plus / Plus Query: 37 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 96 ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct: 117980 gatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtt 118039 Query: 97 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 156 ||||||| |||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 118040 aagggaatt-----caccggagccgtagcgaaagcgagtcttcctagggcaattgtcact 118094 Query: 157 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 216 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 118095 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 118154 Query: 217 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 276 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 118155 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 118214 Query: 277 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 336 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118215 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 118274 Query: 337 gactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 395 |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 118275 gactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaat 118334 Query: 396 cgaggcaaactctgaatactagatatg 422 |||||||||||||||||||||| |||| Sbjct: 118335 cgaggcaaactctgaatactaggtatg 118361 Score = 60.0 bits (30), Expect = 7e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 445 ggtcggccagtgagacgatgggggataagcttcatcgt 482 |||| |||||||||||| |||||||||||||||||||| Sbjct: 150277 ggtcagccagtgagacggtgggggataagcttcatcgt 150240 Score = 60.0 bits (30), Expect = 7e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 445 ggtcggccagtgagacgatgggggataagcttcatcgt 482 |||| |||||||||||| |||||||||||||||||||| Sbjct: 118389 ggtcagccagtgagacggtgggggataagcttcatcgt 118426
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 609 bits (307), Expect = e-171 Identities = 368/387 (95%), Gaps = 6/387 (1%) Strand = Plus / Plus Query: 37 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 96 ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct: 559 gatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtt 618 Query: 97 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 156 ||||||| |||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 619 aagggaatt-----caccggagccgtagcgaaagcgagtcttcctagggcaattgtcact 673 Query: 157 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 216 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 674 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 733 Query: 217 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 276 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 734 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 793 Query: 277 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 336 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 794 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 853 Query: 337 gactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 395 |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 854 gactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaat 913 Query: 396 cgaggcaaactctgaatactagatatg 422 |||||||||||||||||||||| |||| Sbjct: 914 cgaggcaaactctgaatactaggtatg 940 Score = 60.0 bits (30), Expect = 7e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 445 ggtcggccagtgagacgatgggggataagcttcatcgt 482 |||| |||||||||||| |||||||||||||||||||| Sbjct: 968 ggtcagccagtgagacggtgggggataagcttcatcgt 1005
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 605 bits (305), Expect = e-170 Identities = 423/461 (91%), Gaps = 6/461 (1%) Strand = Plus / Minus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||| ||| ||||||||||||| |||||||||| |||||||||||||||||| Sbjct: 127898 cagtgggaggagaattggatctctgaccgcatgcctgttgaggaatgagccggcgactca 127839 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 139 ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 127838 taggcagtggcctggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttc 127784 Query: 140 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 199 |||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 127783 ctagggcaattgtcactgctcatggacccgaacctgggtgatctatccatgaccaggatg 127724 Query: 200 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 259 |||||||| | |||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 127723 aagcttgggtaaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatga 127664 Query: 260 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127663 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 127604 Query: 320 gttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctg 378 |||||||||||||||||||| |||| | |||||||||||||||||||||||||||||||| Sbjct: 127603 gttgaggcgcagcagttgaccggactacctaggggtaaagcactgtttcggtgcgggctg 127544 Query: 379 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 438 || ||||||||||||||||||||||||||||||||||| |||||||| || ||| || Sbjct: 127543 cgaaagcggtaccaaatcgaggcaaactctgaatactaggtatgacccccgaagaacggg 127484 Query: 439 ggtcaaggtcggccagtgagacgatgggggataagcttcat 479 | | |||| ||||||||||||||||||||||||||||| Sbjct: 127483 gaaaagggtcaaccagtgagacgatgggggataagcttcat 127443 Score = 605 bits (305), Expect = e-170 Identities = 423/461 (91%), Gaps = 6/461 (1%) Strand = Plus / Plus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||| ||| ||||||||||||| |||||||||| |||||||||||||||||| Sbjct: 95549 cagtgggaggagaattggatctctgaccgcatgcctgttgaggaatgagccggcgactca 95608 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 139 ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 95609 taggcagtggcctggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttc 95663 Query: 140 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 199 |||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 95664 ctagggcaattgtcactgctcatggacccgaacctgggtgatctatccatgaccaggatg 95723 Query: 200 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 259 |||||||| | |||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 95724 aagcttgggtaaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatga 95783 Query: 260 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95784 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 95843 Query: 320 gttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctg 378 |||||||||||||||||||| |||| | |||||||||||||||||||||||||||||||| Sbjct: 95844 gttgaggcgcagcagttgaccggactacctaggggtaaagcactgtttcggtgcgggctg 95903 Query: 379 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 438 || ||||||||||||||||||||||||||||||||||| |||||||| || ||| || Sbjct: 95904 cgaaagcggtaccaaatcgaggcaaactctgaatactaggtatgacccccgaagaacggg 95963 Query: 439 ggtcaaggtcggccagtgagacgatgggggataagcttcat 479 | | |||| ||||||||||||||||||||||||||||| Sbjct: 95964 gaaaagggtcaaccagtgagacgatgggggataagcttcat 96004
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 599 bits (302), Expect = e-168 Identities = 424/462 (91%), Gaps = 7/462 (1%) Strand = Plus / Plus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct: 547 cagtgggaggagaatcggatctctgaccgcgtgcctgttgaagaatgagccggcgactta 606 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 139 ||||||||||| ||||||||||||| |||||||||||||||||||||| |||||| Sbjct: 607 taggcagtggcctggttaagggaac-----ccaccggagccgtagcgaaagcaagtcttc 661 Query: 140 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 199 | |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 662 ctggggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 721 Query: 200 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 259 |||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 722 aagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatga 781 Query: 260 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 782 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 841 Query: 320 gttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctg 378 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 842 gttgaggcgcagcagttgactagactatctaggggtaaagcactgtttcggtgcgggctg 901 Query: 379 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 438 || |||||||||||||||||||||||||||||||||| |||| ||| | ||||| || Sbjct: 902 cgagagcggtaccaaatcgaggcaaactctgaatactggataggactccctaataataga 961 Query: 439 g-gtcaaggtcggccagtgagacgatgggggataagcttcat 479 | || | |||| |||||||||| ||||||||||||||||| Sbjct: 962 gagtaagggtcaaccagtgagacagtgggggataagcttcat 1003
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 593 bits (299), Expect = e-166 Identities = 378/402 (94%), Gaps = 3/402 (0%) Strand = Plus / Plus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct: 526 cagtgggaggagaatcggatctctgaccgcgtgcctgttgaagaatgagccggcgactta 585 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 139 ||||||||||| |||||||||||| | | ||||||||||| ||||||||||||||||| Sbjct: 586 taggcagtggcctggttaagggaaagaa--ccaccggagccatagcgaaagcgagtcttc 643 Query: 140 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 199 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 644 ccagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 703 Query: 200 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 259 |||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 704 aagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatga 763 Query: 260 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 764 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 823 Query: 320 gttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctg 378 ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 824 gttgaggcgcaacagttgactggactatctaggggtaaagcactgtttcggtgcgggccg 883 Query: 379 cgcgagcggtaccaaatcgaggcaaactctgaatactagata 420 || |||||||||||||||||||||||||||||||||| |||| Sbjct: 884 cgagagcggtaccaaatcgaggcaaactctgaatactggata 925 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 451 ccagtgagacgatgggggataagcttcat 479 |||||||||| ||||||||||||||||| Sbjct: 955 ccagtgagacagtgggggataagcttcat 983
>gb|AF263517.1|AF263517 Vitis vinifera 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 433 Score = 589 bits (297), Expect = e-165 Identities = 336/349 (96%), Gaps = 5/349 (1%) Strand = Plus / Plus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 149 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 150 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 204 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 205 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 264 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 265 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 324 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 325 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcggttgac 384 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggt 388 ||||||||||||||||||||||||||||||||||||| ||| ||||||| Sbjct: 385 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggt 433
>gb|AF143267.1| Vitis vinifera 23S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 425 Score = 569 bits (287), Expect = e-159 Identities = 323/335 (96%), Gaps = 5/335 (1%) Strand = Plus / Plus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 145 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 146 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 200 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 201 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 260 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 261 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 320 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| Sbjct: 321 gccactcgaacccagagctagctggctctccccgaaatgcgttgaggcgcagcggttgac 380 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgg 374 ||||||||||||||||||||||||||||||||||| Sbjct: 381 tggacatctaggggtaaagcactgtttcggtgcgg 415
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 567 bits (286), Expect = e-158 Identities = 292/294 (99%) Strand = Plus / Minus Query: 25 ggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggc 84 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75153 ggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggc 75094 Query: 85 agtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagg 144 ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| Sbjct: 75093 agtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagg 75034 Query: 145 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagct 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75033 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagct 74974 Query: 205 tggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgt 264 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 74973 tggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgt 74914 Query: 265 ggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 74913 ggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 74860
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 567 bits (286), Expect = e-158 Identities = 292/294 (99%) Strand = Plus / Plus Query: 25 ggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggc 84 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382385 ggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggc 382444 Query: 85 agtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagg 144 ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| Sbjct: 382445 agtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagg 382504 Query: 145 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagct 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382505 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagct 382564 Query: 205 tggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgt 264 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382565 tggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgt 382624 Query: 265 ggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382625 ggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 382678
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 567 bits (286), Expect = e-158 Identities = 292/294 (99%) Strand = Plus / Minus Query: 25 ggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggc 84 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113244 ggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggc 113185 Query: 85 agtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagg 144 ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| Sbjct: 113184 agtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagg 113125 Query: 145 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagct 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113124 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagct 113065 Query: 205 tggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgt 264 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113064 tggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgt 113005 Query: 265 ggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113004 ggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 112951
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 567 bits (286), Expect = e-158 Identities = 295/298 (98%) Strand = Plus / Minus Query: 25 ggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggc 84 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367926 ggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggc 367867 Query: 85 agtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagg 144 ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| Sbjct: 367866 agtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagg 367807 Query: 145 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagct 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367806 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagct 367747 Query: 205 tggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgt 264 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367746 tggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgt 367687 Query: 265 ggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 322 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 367686 ggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaattcgtt 367629 Score = 567 bits (286), Expect = e-158 Identities = 295/298 (98%) Strand = Plus / Minus Query: 25 ggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggc 84 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184531 ggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggc 184472 Query: 85 agtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagg 144 ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| Sbjct: 184471 agtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagg 184412 Query: 145 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagct 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184411 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagct 184352 Query: 205 tggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgt 264 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184351 tggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgt 184292 Query: 265 ggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 322 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 184291 ggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaattcgtt 184234
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 533 bits (269), Expect = e-148 Identities = 371/401 (92%), Gaps = 3/401 (0%) Strand = Plus / Plus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||| ||| | ||||||| ||||||||||||||||||||||||||||||||| Sbjct: 144462 cagtgggaggagaatgagatctctaaccgcgtgcctgttgaagaatgagccggcgacttg 144521 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 139 ||||| ||||| ||||||||| | ||||| |||||||||||||||||||||||||| Sbjct: 144522 taggcggtggcccggttaagggggag-aaccc-ccggagccgtagcgaaagcgagtcttg 144579 Query: 140 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 199 | |||| |||||||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct: 144580 ctggggcaattgtcaccgcttataaacccgaacctgggtgatctatccatgaccaggatg 144639 Query: 200 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 259 |||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 144640 aagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatga 144699 Query: 260 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 144700 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 144759 Query: 320 gttgaggcgcagcagttgactgga-catctaggggtaaagcactgtttcggtgcgggctg 378 ||||||||||||||||||||| || |||||||||||||||||| ||| |||||||||||| Sbjct: 144760 gttgaggcgcagcagttgactagaccatctaggggtaaagcaccgttccggtgcgggctg 144819 Query: 379 cgcgagcggtaccaaatcgaggcaaactctgaatactagat 419 || |||||||||||||||||||||||||||||||||||||| Sbjct: 144820 cgagagcggtaccaaatcgaggcaaactctgaatactagat 144860 Score = 533 bits (269), Expect = e-148 Identities = 371/401 (92%), Gaps = 3/401 (0%) Strand = Plus / Minus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||| ||| | ||||||| ||||||||||||||||||||||||||||||||| Sbjct: 88389 cagtgggaggagaatgagatctctaaccgcgtgcctgttgaagaatgagccggcgacttg 88330 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 139 ||||| ||||| ||||||||| | ||||| |||||||||||||||||||||||||| Sbjct: 88329 taggcggtggcccggttaagggggag-aaccc-ccggagccgtagcgaaagcgagtcttg 88272 Query: 140 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 199 | |||| |||||||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct: 88271 ctggggcaattgtcaccgcttataaacccgaacctgggtgatctatccatgaccaggatg 88212 Query: 200 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 259 |||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 88211 aagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatga 88152 Query: 260 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88151 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 88092 Query: 320 gttgaggcgcagcagttgactgga-catctaggggtaaagcactgtttcggtgcgggctg 378 ||||||||||||||||||||| || |||||||||||||||||| ||| |||||||||||| Sbjct: 88091 gttgaggcgcagcagttgactagaccatctaggggtaaagcaccgttccggtgcgggctg 88032 Query: 379 cgcgagcggtaccaaatcgaggcaaactctgaatactagat 419 || |||||||||||||||||||||||||||||||||||||| Sbjct: 88031 cgagagcggtaccaaatcgaggcaaactctgaatactagat 87991 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Plus Query: 451 ccagtgagacgatgggggataagcttca 478 |||||||||||||| ||||||||||||| Sbjct: 144899 ccagtgagacgatgagggataagcttca 144926 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Minus Query: 451 ccagtgagacgatgggggataagcttca 478 |||||||||||||| ||||||||||||| Sbjct: 87952 ccagtgagacgatgagggataagcttca 87925
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 525 bits (265), Expect = e-146 Identities = 373/405 (92%), Gaps = 8/405 (1%) Strand = Plus / Minus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||| ||| | |||||||||||||||||| ||||||||||||||||||||| | Sbjct: 6005 cagtgggaggagaatggaatctctgaccgcgtgccttttgaagaatgagccggcgactta 5946 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 139 |||||||||||||||||||||| || |||||||||||||||||| |||||||||| Sbjct: 5945 taggcagtggcttggttaagggcac-----ccaccggagccgtagcgagagcgagtcttc 5891 Query: 140 atagggcgattgtcactgctt-atggacccgaacctgggtgatctatccatgaccaggat 198 ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 5890 atagggcaattgtcactgctttatggacccgaacctgggtgatctatccatgaccaggat 5831 Query: 199 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 258 |||||| ||||||||||||| |||||||||||||||||||||||| | |||||||||||| Sbjct: 5830 gaagct-ggatgaaactaagtagaggtccgaaccgactgatgttgcaaaatcagcggatg 5772 Query: 259 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5771 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 5712 Query: 319 cgttgaggcgcagcagttgactgga-catctaggggtaaagcactgtttcggtgcgggct 377 ||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||| Sbjct: 5711 cgttgaggcgcagcagttgactggaccgtctaggggtaaagcactgtttcggtataggcc 5652 Query: 378 gcgcgagcggtaccaaatcgaggcaaactctgaatactagatatg 422 | | |||||||| | ||||||||||||| ||||||||||||||| Sbjct: 5651 gtgtaagcggtacgacatcgaggcaaactatgaatactagatatg 5607 Score = 60.0 bits (30), Expect = 7e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 445 ggtcggccagtgagacgatgggggataagcttcatcgt 482 |||| ||||||||||||||| ||||||||||||||||| Sbjct: 5602 ggtcagccagtgagacgatgagggataagcttcatcgt 5565
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 490 bits (247), Expect = e-135 Identities = 410/462 (88%), Gaps = 8/462 (1%) Strand = Plus / Minus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct: 138725 cagtgggaggagaattggatctctgaccgcgtgcctgttgaagaatgagccggcgactta 138666 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 139 ||||| | ||| ||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 138665 taggcggcggcctggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttc 138611 Query: 140 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 199 ||||| | |||| ||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 138610 ccagggcaactgtcgctgcttatggacccgaacccgggtgatctatccatgaccaggatg 138551 Query: 200 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 259 |||||||||| ||| | | ||||||||||||||||||||||||| ||||||||||||| Sbjct: 138550 aagcttggatagaaccaggtggaggtccgaaccgactgatgttgaaaaatcagcggatga 138491 Query: 260 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 319 || |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 138490 gtcgtggttaggggtgaaatgccactcgaacccggagctagctggttctccccgaaatgc 138431 Query: 320 gttgaggcgcagcagttgact-ggacatctaggggtaaagcactgtttcggtgcgggctg 378 ||||||||||||| ||||||| || | || | |||||||||||||| |||||||||||| Sbjct: 138430 gttgaggcgcagcggttgactaggctacctggaggtaaagcactgttacggtgcgggctg 138371 Query: 379 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataaca-- 436 || |||| |||||||| |||||||||||||||||||| | |||| ||| | | | ||| Sbjct: 138370 cgagagcagtaccaaaccgaggcaaactctgaatactgggtatggccccagagtcacacg 138311 Query: 437 ggggtcaaggtcggccagtgagacgatgggggataagcttca 478 |||| ||||||||||||||||||| |||||||||||||||| Sbjct: 138310 agggtgaaggtcggccagtgagacggtgggggataagcttca 138269 Score = 490 bits (247), Expect = e-135 Identities = 410/462 (88%), Gaps = 8/462 (1%) Strand = Plus / Plus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct: 83152 cagtgggaggagaattggatctctgaccgcgtgcctgttgaagaatgagccggcgactta 83211 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 139 ||||| | ||| ||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 83212 taggcggcggcctggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttc 83266 Query: 140 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 199 ||||| | |||| ||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 83267 ccagggcaactgtcgctgcttatggacccgaacccgggtgatctatccatgaccaggatg 83326 Query: 200 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 259 |||||||||| ||| | | ||||||||||||||||||||||||| ||||||||||||| Sbjct: 83327 aagcttggatagaaccaggtggaggtccgaaccgactgatgttgaaaaatcagcggatga 83386 Query: 260 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 319 || |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 83387 gtcgtggttaggggtgaaatgccactcgaacccggagctagctggttctccccgaaatgc 83446 Query: 320 gttgaggcgcagcagttgact-ggacatctaggggtaaagcactgtttcggtgcgggctg 378 ||||||||||||| ||||||| || | || | |||||||||||||| |||||||||||| Sbjct: 83447 gttgaggcgcagcggttgactaggctacctggaggtaaagcactgttacggtgcgggctg 83506 Query: 379 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataaca-- 436 || |||| |||||||| |||||||||||||||||||| | |||| ||| | | | ||| Sbjct: 83507 cgagagcagtaccaaaccgaggcaaactctgaatactgggtatggccccagagtcacacg 83566 Query: 437 ggggtcaaggtcggccagtgagacgatgggggataagcttca 478 |||| ||||||||||||||||||| |||||||||||||||| Sbjct: 83567 agggtgaaggtcggccagtgagacggtgggggataagcttca 83608
>gb|BT014358.1| Lycopersicon esculentum clone 133635F, mRNA sequence Length = 838 Score = 488 bits (246), Expect = e-135 Identities = 276/286 (96%), Gaps = 5/286 (1%) Strand = Plus / Plus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 535 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 594 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 595 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 649 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 650 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 709 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 710 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 769 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgag 325 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 770 gccactcgaacccagagctagctggttctccccgaaatgcgttgag 815
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 488 bits (246), Expect = e-135 Identities = 363/399 (90%), Gaps = 6/399 (1%) Strand = Plus / Plus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||| ||| | |||||||||||||||||||||||||||||||||||||||| | Sbjct: 542 cagtgggaggagaatggaatctctgaccgcgtgcctgttgaagaatgagccggcgactta 601 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 139 ||||||||||| ||||||||| | ||| || |||||||||||||||||||||||| Sbjct: 602 taggcagtggcctggttaaggcga--gaagcc---ggagccgtagcgaaagcgagtcttt 656 Query: 140 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 199 |||||||| |||||||||||||||||||||||| |||||||||| ||||| ||||| || Sbjct: 657 ctagggcgaatgtcactgcttatggacccgaacccgggtgatctaaccatggccagggtg 716 Query: 200 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 259 |||||||| |||| | ||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 717 aagcttgggtgaagccaagtggaggtccgaaccgactgatgttgaaaaatcagcggatga 776 Query: 260 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 319 | ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| Sbjct: 777 gctgtggttaggggtgaaatgccactcgaactcggagctagctggttctccccgaaatgc 836 Query: 320 gttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctg 378 ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 837 gttgaggcgcagcggttgactggactgcctaggggtaaagcactgtttcggtgcgggctg 896 Query: 379 cgcgagcggtaccaaatcgaggcaaactctgaatactag 417 || ||||||||||||||||||||||||||||||||||| Sbjct: 897 cgaaagcggtaccaaatcgaggcaaactctgaatactag 935 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 445 ggtcggccagtgagacgatgggggataagcttcatcgt 482 |||| |||||| ||||| |||||||||||||||||||| Sbjct: 946 ggtcagccagtaagacggtgggggataagcttcatcgt 983
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 488 bits (246), Expect = e-135 Identities = 363/399 (90%), Gaps = 6/399 (1%) Strand = Plus / Plus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||| ||| | |||||||||||||||||||||||||||||||||||||||| | Sbjct: 555 cagtgggaggagaatggaatctctgaccgcgtgcctgttgaagaatgagccggcgactta 614 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 139 ||||||||||| ||||||||| | ||| || |||||||||||||||||||||||| Sbjct: 615 taggcagtggcctggttaaggcga--gaagcc---ggagccgtagcgaaagcgagtcttt 669 Query: 140 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 199 |||||||| |||||||||||||||||||||||| |||||||||| ||||| ||||| || Sbjct: 670 ctagggcgaatgtcactgcttatggacccgaacccgggtgatctaaccatggccagggtg 729 Query: 200 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 259 |||||||| |||| | ||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 730 aagcttgggtgaagccaagtggaggtccgaaccgactgatgttgaaaaatcagcggatga 789 Query: 260 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 319 | ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| Sbjct: 790 gctgtggttaggggtgaaatgccactcgaactcggagctagctggttctccccgaaatgc 849 Query: 320 gttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctg 378 ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 850 gttgaggcgcagcggttgactggactgcctaggggtaaagcactgtttcggtgcgggctg 909 Query: 379 cgcgagcggtaccaaatcgaggcaaactctgaatactag 417 || ||||||||||||||||||||||||||||||||||| Sbjct: 910 cgaaagcggtaccaaatcgaggcaaactctgaatactag 948 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 445 ggtcggccagtgagacgatgggggataagcttcatcgt 482 |||| |||||| ||||| |||||||||||||||||||| Sbjct: 959 ggtcagccagtaagacggtgggggataagcttcatcgt 996
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 486 bits (245), Expect = e-134 Identities = 398/445 (89%), Gaps = 8/445 (1%) Strand = Plus / Plus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 ||||||| |||| ||||||||||||||||||||||||||||| | ||||||||||||||| Sbjct: 566 ctctgactgcgttcctgttgaagaatgagccggcgactcataagtagtggcttggttaag 625 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 | |||| ||||||||| | |||||||||| |||||| ||||||| | ||||| |||| Sbjct: 626 g----ggaa-ccaccggagtcatagcgaaagcaagtcttcatagggcaaatgtcattgct 680 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 ||||||||||||| ||||||||||| ||||||||| |||||| |||| |||||||||| Sbjct: 681 tatggacccgaacttgggtgatctaaccatgaccaagatgaaatttggttgaaactaagt 740 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 741 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 800 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 |||| || |||||| |||||| ||||||||||||||||||||| |||||||| |||| || Sbjct: 801 gccaatcaaacccaaagctagttggttctccccgaaatgcgtttaggcgcagaagtt-ac 859 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 ||||||||||||||||||||||||||||| |||| ||| |||| ||||||||| ||| Sbjct: 860 cagacatctaggggtaaagcactgtttcggttcgggtcgcgagagccgtaccaaattgag 919 Query: 400 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 457 ||||||| ||||||||||||||||| ||||||||||||||| | ||||| | ||||||| Sbjct: 920 gcaaactatgaatactagatatgacctccaaaaataacagggataaaggtggaccagtga 979 Query: 458 gacgatgggggataagcttcatcgt 482 ||| ||||||||||||||||||||| Sbjct: 980 gaccatgggggataagcttcatcgt 1004
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 484 bits (244), Expect = e-133 Identities = 364/400 (91%), Gaps = 8/400 (2%) Strand = Plus / Plus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||| ||| | |||||||||||||||||||||||||||||||||||||||| | Sbjct: 659 cagtgggaggagaatggaatctctgaccgcgtgcctgttgaagaatgagccggcgactta 718 Query: 80 taggcagtggcttggttaagggaacg-gaacccaccggagccgtagcgaaagcgagtctt 138 ||||||||||| ||||||||| || ||| || |||||||||||||||||||||||| Sbjct: 719 taggcagtggcctggttaagg---cgtgaagcc---ggagccgtagcgaaagcgagtctt 772 Query: 139 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 198 |||||||| |||||||||||||||||||||||| |||||||||| ||||| ||||| | Sbjct: 773 tctagggcgaatgtcactgcttatggacccgaacccgggtgatctaaccatggccagggt 832 Query: 199 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 258 ||||||||| |||| | ||| ||||||||||||||||||||||||| |||||||||||| Sbjct: 833 gaagcttgggtgaagccaagtggaggtccgaaccgactgatgttgaaaaatcagcggatg 892 Query: 259 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 318 || ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| Sbjct: 893 agctgtggttaggggtgaaatgccactcgaactcggagctagctggttctccccgaaatg 952 Query: 319 cgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggct 377 |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 953 cgttgaggcgcagcggttgactggactgcctaggggtaaagcactgtttcggtgcgggct 1012 Query: 378 gcgcgagcggtaccaaatcgaggcaaactctgaatactag 417 ||| ||||||||||||||||||||||||||||||||||| Sbjct: 1013 gcgaaagcggtaccaaatcgaggcaaactctgaatactag 1052 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 445 ggtcggccagtgagacgatgggggataagcttcatcgt 482 |||| |||||| ||||| |||||||||||||||||||| Sbjct: 1063 ggtcagccagtaagacggtgggggataagcttcatcgt 1100
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 478 bits (241), Expect = e-132 Identities = 348/381 (91%), Gaps = 7/381 (1%) Strand = Plus / Plus Query: 43 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 102 ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 567 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggttaaggga 626 Query: 103 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 162 | |||||| |||| |||||||||| |||||| |||||||||||||||| |||| Sbjct: 627 at-----ccaccgaagccatagcgaaagcaagtctttc-agggcgattgtcactgtttat 680 Query: 163 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 222 ||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||| || Sbjct: 681 ggacccgaacccgggtgatctatccatgaccaggatgaagcttgggtgaaaccaagtgga 740 Query: 223 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 282 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 741 ggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgcc 800 Query: 283 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgg 342 |||||||| | ||||||||||||||||||||||||||||||||||||||| ||| | ||| Sbjct: 801 actcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaaatgg 860 Query: 343 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 401 | || ||||||||||||||||||||||||||||||||| |||||||||||||||| || Sbjct: 861 gctatttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgc 920 Query: 402 aaactctgaatactagatatg 422 ||||||||||||||| ||||| Sbjct: 921 aaactctgaatactaaatatg 941 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 450 gccagtgagacgatgggggataagcttcatcgt 482 |||||| ||||| |||||||||||||||||||| Sbjct: 951 gccagtaagacggtgggggataagcttcatcgt 983
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 478 bits (241), Expect = e-132 Identities = 348/381 (91%), Gaps = 7/381 (1%) Strand = Plus / Plus Query: 43 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 102 ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 3601 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggttaaggga 3660 Query: 103 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 162 | |||||| |||| |||||||||| |||||| |||||||||||||||| |||| Sbjct: 3661 at-----ccaccgaagccatagcgaaagcaagtctttc-agggcgattgtcactgtttat 3714 Query: 163 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 222 ||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||| || Sbjct: 3715 ggacccgaacccgggtgatctatccatgaccaggatgaagcttgggtgaaaccaagtgga 3774 Query: 223 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 282 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 3775 ggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgcc 3834 Query: 283 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgg 342 |||||||| | ||||||||||||||||||||||||||||||||||||||| ||| | ||| Sbjct: 3835 actcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaaatgg 3894 Query: 343 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 401 | || ||||||||||||||||||||||||||||||||| |||||||||||||||| || Sbjct: 3895 gctatttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgc 3954 Query: 402 aaactctgaatactagatatg 422 ||||||||||||||| ||||| Sbjct: 3955 aaactctgaatactaaatatg 3975 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 450 gccagtgagacgatgggggataagcttcatcgt 482 |||||| ||||| |||||||||||||||||||| Sbjct: 3985 gccagtaagacggtgggggataagcttcatcgt 4017
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 478 bits (241), Expect = e-132 Identities = 348/381 (91%), Gaps = 7/381 (1%) Strand = Plus / Plus Query: 38 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 97 |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 562 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcgtggtta 621 Query: 98 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 157 |||||| ||||||||||||||||||||||||||| || |||||||||||||||| Sbjct: 622 agggaatt-----caccggagccgtagcgaaagcgagtct-aacagggcgattgtcactg 675 Query: 158 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 217 |||||||||||||||| |||||||||||||||| |||||||||||||||| |||||| || Sbjct: 676 cttatggacccgaacccgggtgatctatccatggccaggatgaagcttgggtgaaaccaa 735 Query: 218 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 277 | ||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct: 736 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttagcggtgaa 795 Query: 278 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 337 || ||| |||||| | ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 796 ataccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtta 855 Query: 338 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 396 | ||| | |||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 856 attgggctgcctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatc 915 Query: 397 gaggcaaactctgaatactag 417 ||||||||||||||||||||| Sbjct: 916 gaggcaaactctgaatactag 936 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 450 gccagtgagacgatgggggataagcttcatcgt 482 |||||||||||| |||||||||||||||||||| Sbjct: 953 gccagtgagacggtgggggataagcttcatcgt 985
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 476 bits (240), Expect = e-131 Identities = 351/385 (91%), Gaps = 6/385 (1%) Strand = Plus / Plus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||||||||||||||||||||||||||||||||||||| | |||||| |||||||| Sbjct: 579 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataagtagtggcctggttaag 638 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 | |||| ||||||||||| |||||||||| |||||| ||||||| | ||||| |||| Sbjct: 639 g----ggaa-ccaccggagccatagcgaaagcaagtcttcatagggcaaatgtcattgct 693 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 |||| |||||||| ||||||||||| |||||||||||||||| |||| |||||||||| Sbjct: 694 tatgtacccgaacttgggtgatctaaccatgaccaggatgaaatttggttgaaactaagt 753 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 754 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 813 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 |||| ||||||||| |||||||||||||||||||||||||||| ||| ||||||||| || Sbjct: 814 gccaatcgaacccaaagctagctggttctccccgaaatgcgtttaggggcagcagtt-ac 872 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 ||||||||||||||||||||||||||||||||||| || |||||||||||||| ||| Sbjct: 873 cggacatctaggggtaaagcactgtttcggtgcgggtctcgagagcggtaccaaattgag 932 Query: 400 gcaaactctgaatactagatatgac 424 ||||||| ||||||||||||||||| Sbjct: 933 gcaaactatgaatactagatatgac 957 Score = 60.0 bits (30), Expect = 7e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 449 ggccagtgagacgatgggggataagcttcatcgt 482 |||||||||||| ||||||||||||||||||||| Sbjct: 1000 ggccagtgagaccatgggggataagcttcatcgt 1033
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 470 bits (237), Expect = e-129 Identities = 347/381 (91%), Gaps = 7/381 (1%) Strand = Plus / Plus Query: 43 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 102 ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 567 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggttaaggga 626 Query: 103 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 162 | |||||| |||| |||||||||| |||||| |||||||||||||||| |||| Sbjct: 627 at-----ccaccgaagccatagcgaaagcaagtctttc-agggcgattgtcactgtttat 680 Query: 163 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 222 ||||||||||| ||||||||||||||||||||||||||||||||| | |||| ||| || Sbjct: 681 ggacccgaacccgggtgatctatccatgaccaggatgaagcttgggtaaaaccaagtgga 740 Query: 223 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 282 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 741 ggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgcc 800 Query: 283 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgg 342 |||||||| | ||||||||||||||||||||||||||||||||||||||| ||| | ||| Sbjct: 801 actcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaaatgg 860 Query: 343 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 401 | || ||||||||||||||||||||||||||||||||| |||||||||||||||| || Sbjct: 861 gctatttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgc 920 Query: 402 aaactctgaatactagatatg 422 ||||||||||||||| ||||| Sbjct: 921 aaactctgaatactaaatatg 941 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 450 gccagtgagacgatgggggataagcttcatcgt 482 |||||| ||||| |||||||||||||||||||| Sbjct: 951 gccagtaagacggtgggggataagcttcatcgt 983
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 462 bits (233), Expect = e-127 Identities = 346/381 (90%), Gaps = 7/381 (1%) Strand = Plus / Minus Query: 38 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 97 |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 124703 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcgtggtta 124644 Query: 98 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 157 |||||| ||||||||||||||||||||||||||| || |||||||||||||||| Sbjct: 124643 agggaatt-----caccggagccgtagcgaaagcgagtct-aacagggcgattgtcactg 124590 Query: 158 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 217 |||||||||||||||| |||||||||||||||| |||||||||||||||| |||| | || Sbjct: 124589 cttatggacccgaacccgggtgatctatccatggccaggatgaagcttgggtgaagccaa 124530 Query: 218 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 277 | ||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct: 124529 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttagcggtgaa 124470 Query: 278 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 337 || ||| |||||| | ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 124469 ataccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtta 124410 Query: 338 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 396 | ||| | |||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 124409 attgggctgcctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatc 124350 Query: 397 gaggcaaactctgaatactag 417 ||| ||||||||||||||||| Sbjct: 124349 gagtcaaactctgaatactag 124329 Score = 462 bits (233), Expect = e-127 Identities = 346/381 (90%), Gaps = 7/381 (1%) Strand = Plus / Plus Query: 38 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 97 |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 95163 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcgtggtta 95222 Query: 98 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 157 |||||| ||||||||||||||||||||||||||| || |||||||||||||||| Sbjct: 95223 agggaatt-----caccggagccgtagcgaaagcgagtct-aacagggcgattgtcactg 95276 Query: 158 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 217 |||||||||||||||| |||||||||||||||| |||||||||||||||| |||| | || Sbjct: 95277 cttatggacccgaacccgggtgatctatccatggccaggatgaagcttgggtgaagccaa 95336 Query: 218 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 277 | ||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct: 95337 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttagcggtgaa 95396 Query: 278 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 337 || ||| |||||| | ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 95397 ataccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtta 95456 Query: 338 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 396 | ||| | |||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 95457 attgggctgcctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatc 95516 Query: 397 gaggcaaactctgaatactag 417 ||| ||||||||||||||||| Sbjct: 95517 gagtcaaactctgaatactag 95537 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 450 gccagtgagacgatgggggataagcttcatcgt 482 |||||||||||| |||||||||||||||||||| Sbjct: 124312 gccagtgagacggtgggggataagcttcatcgt 124280 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 450 gccagtgagacgatgggggataagcttcatcgt 482 |||||||||||| |||||||||||||||||||| Sbjct: 95554 gccagtgagacggtgggggataagcttcatcgt 95586
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 442 bits (223), Expect = e-121 Identities = 342/379 (90%), Gaps = 2/379 (0%) Strand = Plus / Plus Query: 38 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 97 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4606 atctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 4665 Query: 98 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 157 |||||| | || ||||||||| |||||||||| |||||| |||||| |||||||||| Sbjct: 4666 agggaaattatcc-accggagccatagcgaaagcaagtctttttagggctattgtcactg 4724 Query: 158 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 217 |||||||||||||| |||||||||| ||||| |||||||||||||||| | ||||||| Sbjct: 4725 tctatggacccgaacccgggtgatctaaccatggccaggatgaagcttgggtaaaactaa 4784 Query: 218 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 277 | ||||||| ||||||| ||||||||| |||| ||||||||| ||||||||| |||||| Sbjct: 4785 gtggaggtccaaaccgaccgatgttgaaaaatcggcggatgagctgtggttagtggtgaa 4844 Query: 278 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 337 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||| || Sbjct: 4845 atgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcaatta 4904 Query: 338 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 396 |||| || ||| ||||||||||||||||||||||||||||| || || ||||||||||| Sbjct: 4905 actgcactatccaggggtaaagcactgtttcggtgcgggctacgaaagtggtaccaaatc 4964 Query: 397 gaggcaaactctgaatact 415 ||||||||||||||||||| Sbjct: 4965 gaggcaaactctgaatact 4983
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 442 bits (223), Expect = e-121 Identities = 342/379 (90%), Gaps = 2/379 (0%) Strand = Plus / Plus Query: 38 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 97 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 573 atctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 632 Query: 98 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 157 |||||| | || ||||||||| |||||||||| |||||| |||||| |||||||||| Sbjct: 633 agggaaattatcc-accggagccatagcgaaagcaagtctttttagggctattgtcactg 691 Query: 158 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 217 |||||||||||||| |||||||||| ||||| |||||||||||||||| | ||||||| Sbjct: 692 tctatggacccgaacccgggtgatctaaccatggccaggatgaagcttgggtaaaactaa 751 Query: 218 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 277 | ||||||| ||||||| ||||||||| |||| ||||||||| ||||||||| |||||| Sbjct: 752 gtggaggtccaaaccgaccgatgttgaaaaatcggcggatgagctgtggttagtggtgaa 811 Query: 278 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 337 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||| || Sbjct: 812 atgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcaatta 871 Query: 338 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 396 |||| || ||| ||||||||||||||||||||||||||||| || || ||||||||||| Sbjct: 872 actgcactatccaggggtaaagcactgtttcggtgcgggctacgaaagtggtaccaaatc 931 Query: 397 gaggcaaactctgaatact 415 ||||||||||||||||||| Sbjct: 932 gaggcaaactctgaatact 950
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 442 bits (223), Expect = e-121 Identities = 342/379 (90%), Gaps = 2/379 (0%) Strand = Plus / Plus Query: 38 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 97 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 573 atctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 632 Query: 98 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 157 |||||| | || ||||||||| |||||||||| |||||| |||||| |||||||||| Sbjct: 633 agggaaattatcc-accggagccatagcgaaagcaagtctttttagggctattgtcactg 691 Query: 158 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 217 |||||||||||||| |||||||||| ||||| |||||||||||||||| | ||||||| Sbjct: 692 tctatggacccgaacccgggtgatctaaccatggccaggatgaagcttgggtaaaactaa 751 Query: 218 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 277 | ||||||| ||||||| ||||||||| |||| ||||||||| ||||||||| |||||| Sbjct: 752 gtggaggtccaaaccgaccgatgttgaaaaatcggcggatgagctgtggttagtggtgaa 811 Query: 278 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 337 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||| || Sbjct: 812 atgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcaatta 871 Query: 338 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 396 |||| || ||| ||||||||||||||||||||||||||||| || || ||||||||||| Sbjct: 872 actgcactatccaggggtaaagcactgtttcggtgcgggctacgaaagtggtaccaaatc 931 Query: 397 gaggcaaactctgaatact 415 ||||||||||||||||||| Sbjct: 932 gaggcaaactctgaatact 950
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 420 bits (212), Expect = e-114 Identities = 345/385 (89%), Gaps = 7/385 (1%) Strand = Plus / Plus Query: 36 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 95 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||| Sbjct: 557 tgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggctaggt 616 Query: 96 taagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcac 155 ||||| | | || ||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 617 taaggta-caaaa---accggagccatagcgaaagcgagtcttaatagggcgat-gtcac 671 Query: 156 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 215 || ||| |||||||||| |||||||||| ||||| |||||||||||||| | ||||||| Sbjct: 672 tgtctatagacccgaacccgggtgatctaaccatggccaggatgaagctttggtgaaact 731 Query: 216 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 275 || || |||||||||||| ||||||||| |||| |||||||||||||||||||||||| Sbjct: 732 cagtggaagtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtg 791 Query: 276 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 335 |||||||| |||||| | ||||||||||||||||||||||||||||||||||||||| || Sbjct: 792 aaatgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggt 851 Query: 336 tgact--ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaa 393 || | || ||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 852 tggatagggctttctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaa 911 Query: 394 atcgaggcaaactctgaatactaga 418 ||||| ||||||||||||||||||| Sbjct: 912 atcgatgcaaactctgaatactaga 936 Score = 48.1 bits (24), Expect = 0.027 Identities = 30/32 (93%) Strand = Plus / Plus Query: 451 ccagtgagacgatgggggataagcttcatcgt 482 ||||||||||| ||||||||||||| |||||| Sbjct: 952 ccagtgagacggtgggggataagctccatcgt 983
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 420 bits (212), Expect = e-114 Identities = 345/385 (89%), Gaps = 7/385 (1%) Strand = Plus / Minus Query: 36 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 95 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||| Sbjct: 115105 tgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggctaggt 115046 Query: 96 taagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcac 155 ||||| | | || ||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 115045 taaggta-caaaa---accggagccatagcgaaagcgagtcttaatagggcgat-gtcac 114991 Query: 156 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 215 || ||| |||||||||| |||||||||| ||||| |||||||||||||| | ||||||| Sbjct: 114990 tgtctatagacccgaacccgggtgatctaaccatggccaggatgaagctttggtgaaact 114931 Query: 216 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 275 || || |||||||||||| ||||||||| |||| |||||||||||||||||||||||| Sbjct: 114930 cagtggaagtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtg 114871 Query: 276 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 335 |||||||| |||||| | ||||||||||||||||||||||||||||||||||||||| || Sbjct: 114870 aaatgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggt 114811 Query: 336 tgact--ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaa 393 || | || ||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 114810 tggatagggctttctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaa 114751 Query: 394 atcgaggcaaactctgaatactaga 418 ||||| ||||||||||||||||||| Sbjct: 114750 atcgatgcaaactctgaatactaga 114726 Score = 420 bits (212), Expect = e-114 Identities = 345/385 (89%), Gaps = 7/385 (1%) Strand = Plus / Plus Query: 36 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 95 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||| Sbjct: 86883 tgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggctaggt 86942 Query: 96 taagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcac 155 ||||| | | || ||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 86943 taaggta-caaaa---accggagccatagcgaaagcgagtcttaatagggcgat-gtcac 86997 Query: 156 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 215 || ||| |||||||||| |||||||||| ||||| |||||||||||||| | ||||||| Sbjct: 86998 tgtctatagacccgaacccgggtgatctaaccatggccaggatgaagctttggtgaaact 87057 Query: 216 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 275 || || |||||||||||| ||||||||| |||| |||||||||||||||||||||||| Sbjct: 87058 cagtggaagtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtg 87117 Query: 276 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 335 |||||||| |||||| | ||||||||||||||||||||||||||||||||||||||| || Sbjct: 87118 aaatgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggt 87177 Query: 336 tgact--ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaa 393 || | || ||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 87178 tggatagggctttctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaa 87237 Query: 394 atcgaggcaaactctgaatactaga 418 ||||| ||||||||||||||||||| Sbjct: 87238 atcgatgcaaactctgaatactaga 87262 Score = 48.1 bits (24), Expect = 0.027 Identities = 30/32 (93%) Strand = Plus / Minus Query: 451 ccagtgagacgatgggggataagcttcatcgt 482 ||||||||||| ||||||||||||| |||||| Sbjct: 114710 ccagtgagacggtgggggataagctccatcgt 114679 Score = 48.1 bits (24), Expect = 0.027 Identities = 30/32 (93%) Strand = Plus / Plus Query: 451 ccagtgagacgatgggggataagcttcatcgt 482 ||||||||||| ||||||||||||| |||||| Sbjct: 87278 ccagtgagacggtgggggataagctccatcgt 87309
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 420 bits (212), Expect = e-114 Identities = 343/384 (89%), Gaps = 2/384 (0%) Strand = Plus / Plus Query: 38 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 97 |||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 568 atctttgaccgcgtgcctgttgaagaatgagccggcgactcatagatagtggctgggtta 627 Query: 98 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 157 |||||| | | || |||||| |||||||||| |||||| ||||| |||||||||| Sbjct: 628 agggaatttatgc-actggagccatagcgaaagcaagtcttttcagggctattgtcactg 686 Query: 158 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 217 |||||||||||||| |||||||||| ||||| |||||||||||||||| ||||||||| Sbjct: 687 tctatggacccgaacccgggtgatctaaccatggccaggatgaagcttgggtgaaactaa 746 Query: 218 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 277 | ||||||| ||||||| ||||||||| |||| ||||||||| ||||||||| |||||| Sbjct: 747 gtggaggtcccaaccgaccgatgttgaaaaatcggcggatgagctgtggttagtggtgaa 806 Query: 278 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 337 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||| || Sbjct: 807 atgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcaatta 866 Query: 338 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 396 ||||||| ||| |||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 867 actggactatccaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatc 926 Query: 397 gaggcaaactctgaatactagata 420 ||| ||||||||||||||| |||| Sbjct: 927 gagacaaactctgaatactggata 950
>emb|AJ318074.1|CSA318074 Cucumis sativus chloroplast ccsA gene, ndhD gene (partial), 4.5S rRNA gene, 23S rRNA gene (partial) and 5S rRNA gene Length = 6689 Score = 420 bits (212), Expect = e-114 Identities = 267/284 (94%), Gaps = 6/284 (2%) Strand = Plus / Plus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaa 98 |||||||||||||||||||||||||||||||||||||||||| || | |||||||| Sbjct: 20 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataacggatgacgttggttaa 79 Query: 99 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 158 | |||||||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 80 g-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgc 134 Query: 159 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 218 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 194 Query: 219 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 278 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 195 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 254 Query: 279 tgccactcgaacccagagctagctggttctccccgaaatgcgtt 322 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 255 tgccactcgaacccagagctagctggttctccccgaaatgcgtt 298 Score = 244 bits (123), Expect = 2e-61 Identities = 138/143 (96%) Strand = Plus / Plus Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 317 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 376 Query: 400 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 459 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 377 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 436 Query: 460 cgatgggggataagcttcatcgt 482 ||||||||||||||||||||||| Sbjct: 437 cgatgggggataagcttcatcgt 459
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 398 bits (201), Expect = e-108 Identities = 341/387 (88%), Gaps = 8/387 (2%) Strand = Plus / Plus Query: 38 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 97 |||| ||||||||||||||||||||||||||||||||||| ||| |||||||| |||||| Sbjct: 966 atctttgaccgcgtgcctgttgaagaatgagccggcgacttataagcagtggcctggtta 1025 Query: 98 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 157 |||| | |||| |||||||||||||||||||| | |||||| |||||||| Sbjct: 1026 agggtat-------accgaagccgtagcgaaagcgagtcattcaagggcgcatgtcactg 1078 Query: 158 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 217 ||||||||||||||| |||||||||||||||| ||||| |||||||||| |||| | || Sbjct: 1079 tttatggacccgaacccgggtgatctatccatggccagggtgaagcttgggtgaagccaa 1138 Query: 218 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 277 | |||| |||||||||||| ||||||| || ||||||||||| |||||||||||||||| Sbjct: 1139 gtggaggcccgaaccgactggtgttgaaaaaccagcggatgagctgtggttaggggtgaa 1198 Query: 278 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 337 ||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1199 atgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcgattg 1258 Query: 338 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 396 ||| || | ||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 1259 actaaactgtttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatc 1318 Query: 397 gaggcaaactctgaatactagatatga 423 |||||||||||||||||||||| |||| Sbjct: 1319 gaggcaaactctgaatactagacatga 1345
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 396 bits (200), Expect = e-107 Identities = 341/386 (88%), Gaps = 9/386 (2%) Strand = Plus / Plus Query: 38 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 97 |||||||||||||||||||||||||||||||||||||||| ||| | |||||| |||||| Sbjct: 519 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataagtagtggcctggtta 578 Query: 98 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 157 || ||| || ||||||||||||||||| |||| || | || || |||||||| Sbjct: 579 agagaat-------actggagccgtagcgaaagcaagtcatatttgg-cgcatgtcactg 630 Query: 158 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 217 |||| |||||||||| |||||||||||||||| ||||| |||| ||||| |||| | || Sbjct: 631 tttatagacccgaacccgggtgatctatccatggccagggtgaaacttgggtgaagccaa 690 Query: 218 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 277 | ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| Sbjct: 691 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaa 750 Query: 278 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 337 ||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 751 atgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcgattg 810 Query: 338 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 396 | ||||| | ||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 811 attggactacttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatc 870 Query: 397 gaggcaaactctgaatactagatatg 422 ||||||||||||||||||||| |||| Sbjct: 871 gaggcaaactctgaatactaggtatg 896 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 452 cagtgagacgatgggggataagcttcatcgt 482 |||||||||| |||||||||||||||||||| Sbjct: 912 cagtgagacggtgggggataagcttcatcgt 942
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 377 bits (190), Expect = e-101 Identities = 336/381 (88%), Gaps = 9/381 (2%) Strand = Plus / Plus Query: 42 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 101 |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 629 ctgaccgcgtgcctgttgaagaatgagccggcgacttataaaaagtggcttggttaagga 688 Query: 102 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgct 159 ||| | |||||||| ||||||||| |||||||||||||||||| |||||| | Sbjct: 689 ----gaatcatccggagccagagcgaaagcaagtcttaatagggcgattttgtcactttt 744 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 |||||||||||||| |||||||||| |||||||||||||||||||||| | |||| ||| Sbjct: 745 tatggacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtaaaaccaagt 804 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 || |||||||||||| ||||||||| |||| |||||||||||||||||||||||||||| Sbjct: 805 ggaagtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaat 864 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga- 338 |||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 865 gccaatcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcggttgat 924 Query: 339 -ctg-gacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 396 || | ||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 925 gttgagctgtctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatc 984 Query: 397 gaggcaaactctgaatactag 417 | ||||||| ||||||||| Sbjct: 985 gtagcaaactaagaatactag 1005 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 451 ccagtgagacgatgggggataagcttcat 479 |||||||||| ||||||||||||||||| Sbjct: 1023 ccagtgagacagtgggggataagcttcat 1051
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 373 bits (188), Expect = e-100 Identities = 338/385 (87%), Gaps = 6/385 (1%) Strand = Plus / Plus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||| |||||| ||||||||||||| |||||||||||| | |||||| |||||||| Sbjct: 554 ctctgaccacgtgcccgttgaagaatgagtcggcgactcataagtagtggcctggttaag 613 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 | |||| ||||||||||| |||||||||| |||||| |||||| | ||||| |||| Sbjct: 614 g----ggaa-ccaccggagccatagcgaaagcaagtcttcatagggaaaatgtcattgct 668 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 | ||||||||||| ||||||||||| |||||||||||||| | |||| | |||||||| Sbjct: 669 tgtggacccgaacttgggtgatctaaccatgaccaggatgcaatttggttaaaactaagt 728 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 | |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 729 gggggtctgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 788 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 |||| ||||||||| ||||||||||||| ||||||||||| || ||||||||||||| || Sbjct: 789 gccaatcgaacccaaagctagctggttcgccccgaaatgcatttaggcgcagcagtt-ac 847 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 || ||||||||||||||||| ||||| |||||||| || |||||||||||||| ||| Sbjct: 848 cgggcatctaggggtaaagcattgttttggtgcgggtcacgagagcggtaccaaattgag 907 Query: 400 gcaaactctgaatactagatatgac 424 ||| ||| ||||||||||||||||| Sbjct: 908 gcagactatgaatactagatatgac 932 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 427 aaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgt 482 ||||||||||||| | | ||| | |||||||||| | ||||||||||||||||||| Sbjct: 944 aaaaataacagggataagggtggaccagtgagaccacgggggataagcttcatcgt 999
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 353 bits (178), Expect = 3e-94 Identities = 263/290 (90%), Gaps = 1/290 (0%) Strand = Plus / Minus Query: 193 caggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcag 252 ||||||| ||||||| |||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 3111 caggatgcagcttgggtgaaactaagtggaggtccgaactgactgatgttgaagaatcag 3052 Query: 253 cggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcccc 312 |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| Sbjct: 3051 cggatgagttgtggttaggggtgaaatgccactcaaacc-agagctagctggttctccct 2993 Query: 313 gaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgc 372 ||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 2992 gaaatgcattgaagcgcagcagttgactggacatctaggagtaaagcactgtttcggtgc 2933 Query: 373 gggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaat 432 |||| | |||| ||||||||| ||||||||||||||||| |||||| || | ||||| Sbjct: 2932 gggcaatgagagcagtaccaaattgaggcaaactctgaatattagatacgatctcaaaat 2873 Query: 433 aacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgt 482 ||| |||||||||||||| |||||||||| | ||||||||||||||||| Sbjct: 2872 cacaagggtcaaggtcggcgagtgagacgacgagggataagcttcatcgt 2823 Score = 157 bits (79), Expect = 4e-35 Identities = 121/135 (89%), Gaps = 5/135 (3%) Strand = Plus / Minus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 3249 ctctgaccgcgtacctattgaagaatgagccgacgactcataggcagtggcttggttaag 3190 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 |||||||||||||||| ||||||||||||||| ||| |||| ||| |||||||| Sbjct: 3189 -----ggaacccaccggagccatagcgaaagcgagtcagaatggggcaattctcactgct 3135 Query: 160 tatggacccgaacct 174 ||||||||||||||| Sbjct: 3134 tatggacccgaacct 3120
>dbj|AK105837.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F02, full insert sequence Length = 1822 Score = 353 bits (178), Expect = 3e-94 Identities = 181/182 (99%) Strand = Plus / Plus Query: 20 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 79 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 447 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 506 Query: 80 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 139 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 507 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttc 566 Query: 140 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 567 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 626 Query: 200 aa 201 || Sbjct: 627 aa 628
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 351 bits (177), Expect = 1e-93 Identities = 381/445 (85%), Gaps = 8/445 (1%) Strand = Plus / Plus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 400 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 457 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 458 gacgatgggggataagcttcatcgt 482 ||| ||||||||||||||||||||| Sbjct: 956 gaccatgggggataagcttcatcgt 980
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 351 bits (177), Expect = 1e-93 Identities = 381/445 (85%), Gaps = 8/445 (1%) Strand = Plus / Plus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 400 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 457 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 458 gacgatgggggataagcttcatcgt 482 ||| ||||||||||||||||||||| Sbjct: 956 gaccatgggggataagcttcatcgt 980
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 351 bits (177), Expect = 1e-93 Identities = 381/445 (85%), Gaps = 8/445 (1%) Strand = Plus / Plus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 400 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 457 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 458 gacgatgggggataagcttcatcgt 482 ||| ||||||||||||||||||||| Sbjct: 956 gaccatgggggataagcttcatcgt 980
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 351 bits (177), Expect = 1e-93 Identities = 381/445 (85%), Gaps = 8/445 (1%) Strand = Plus / Plus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 400 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 457 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 458 gacgatgggggataagcttcatcgt 482 ||| ||||||||||||||||||||| Sbjct: 956 gaccatgggggataagcttcatcgt 980
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 351 bits (177), Expect = 1e-93 Identities = 381/445 (85%), Gaps = 8/445 (1%) Strand = Plus / Plus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 400 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 457 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 458 gacgatgggggataagcttcatcgt 482 ||| ||||||||||||||||||||| Sbjct: 956 gaccatgggggataagcttcatcgt 980
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 351 bits (177), Expect = 1e-93 Identities = 381/445 (85%), Gaps = 8/445 (1%) Strand = Plus / Plus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 600 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 601 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 655 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 656 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 715 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 716 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 775 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 776 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 834 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 835 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 894 Query: 400 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 457 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 895 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 954 Query: 458 gacgatgggggataagcttcatcgt 482 ||| ||||||||||||||||||||| Sbjct: 955 gaccatgggggataagcttcatcgt 979
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 351 bits (177), Expect = 1e-93 Identities = 381/445 (85%), Gaps = 8/445 (1%) Strand = Plus / Plus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 400 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 457 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 458 gacgatgggggataagcttcatcgt 482 ||| ||||||||||||||||||||| Sbjct: 956 gaccatgggggataagcttcatcgt 980
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 351 bits (177), Expect = 1e-93 Identities = 381/445 (85%), Gaps = 8/445 (1%) Strand = Plus / Plus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 400 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 457 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 458 gacgatgggggataagcttcatcgt 482 ||| ||||||||||||||||||||| Sbjct: 956 gaccatgggggataagcttcatcgt 980
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 351 bits (177), Expect = 1e-93 Identities = 381/445 (85%), Gaps = 8/445 (1%) Strand = Plus / Plus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 400 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 457 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 458 gacgatgggggataagcttcatcgt 482 ||| ||||||||||||||||||||| Sbjct: 956 gaccatgggggataagcttcatcgt 980
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 351 bits (177), Expect = 1e-93 Identities = 381/445 (85%), Gaps = 8/445 (1%) Strand = Plus / Plus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 400 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 457 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 458 gacgatgggggataagcttcatcgt 482 ||| ||||||||||||||||||||| Sbjct: 956 gaccatgggggataagcttcatcgt 980
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 351 bits (177), Expect = 1e-93 Identities = 381/445 (85%), Gaps = 8/445 (1%) Strand = Plus / Plus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 400 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 457 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 458 gacgatgggggataagcttcatcgt 482 ||| ||||||||||||||||||||| Sbjct: 956 gaccatgggggataagcttcatcgt 980
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 343 bits (173), Expect = 3e-91 Identities = 380/445 (85%), Gaps = 8/445 (1%) Strand = Plus / Plus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 600 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 601 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 655 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 656 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 715 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 716 ggaggtccgaacagattgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 775 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 776 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 834 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 835 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 894 Query: 400 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 457 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 895 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 954 Query: 458 gacgatgggggataagcttcatcgt 482 ||| ||||||||||||||||||||| Sbjct: 955 gaccatgggggataagcttcatcgt 979
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 343 bits (173), Expect = 3e-91 Identities = 381/445 (85%), Gaps = 9/445 (2%) Strand = Plus / Plus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagc-gtt-ac 834 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 835 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 894 Query: 400 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 457 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 895 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 954 Query: 458 gacgatgggggataagcttcatcgt 482 ||| ||||||||||||||||||||| Sbjct: 955 gaccatgggggataagcttcatcgt 979
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 343 bits (173), Expect = 3e-91 Identities = 380/445 (85%), Gaps = 8/445 (1%) Strand = Plus / Plus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 | || ||||||||| |||||||||||||||||||||||||||| ||||| || ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagtcgtt-ac 835 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 400 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 457 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 458 gacgatgggggataagcttcatcgt 482 ||| ||||||||||||||||||||| Sbjct: 956 gaccatgggggataagcttcatcgt 980
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 337 bits (170), Expect = 2e-89 Identities = 329/379 (86%), Gaps = 6/379 (1%) Strand = Plus / Plus Query: 43 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 102 ||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||| | Sbjct: 714 tgaccgcatgcctgttgaagaatgagccggcgacttataaagagtggcttggttaaggaa 773 Query: 103 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 162 | | || |||||| ||||||||| |||||||||||||| |||||| |||| Sbjct: 774 aaaaatcc----ggagccaaagcgaaagcaagtcttaatagggctcaggtcactctttat 829 Query: 163 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 222 ||||||||||| |||||||||| |||||||||||||||||||| | | |||| || || Sbjct: 830 ggacccgaacccgggtgatctaaccatgaccaggatgaagcttcggtaaaacggagtgga 889 Query: 223 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 282 |||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 890 agtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgcc 949 Query: 283 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac-tg 341 | |||||| | ||||||||||||||||||||||||||||||||||||||| ||| || || Sbjct: 950 aatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaacgtg 1009 Query: 342 gac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 400 | | ||||||||||||||||||||||||||||||||||| |||||||||||||||| | Sbjct: 1010 ggcggtctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgtag 1069 Query: 401 caaactctgaatactagat 419 |||||| ||||||||||| Sbjct: 1070 caaactaagaatactagat 1088 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 451 ccagtgagacgatgggggataagcttcatcgt 482 ||||||||||| |||||||||||||||||||| Sbjct: 1103 ccagtgagacggtgggggataagcttcatcgt 1134
>gb|L42846.1|GLZCPRGOL Gloeotilopsis sterilis large subunit ribosomal RNA gene, partial sequence; chloroplast Length = 2661 Score = 337 bits (170), Expect = 2e-89 Identities = 278/311 (89%), Gaps = 6/311 (1%) Strand = Plus / Plus Query: 113 ccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 170 |||||||| ||||||||||||||| |||||||| || |||||| |||||||||||| Sbjct: 632 ccggagccaaagcgaaagcgagtctgaatagggcacttttgtcactttttatggacccga 691 Query: 171 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 230 ||| |||||||||| |||||||||||||||||||||| | |||| ||| |||||||||| Sbjct: 692 acccgggtgatctaaccatgaccaggatgaagcttgggtaaaaccaagtggaggtccgaa 751 Query: 231 ccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 290 ||||| ||||||||| |||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 752 ccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgccaatcgaac 811 Query: 291 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac---tggac-at 346 | ||||||||||||||||||||||||||||||||||||||| |||||| ||| | || Sbjct: 812 tcggagctagctggttctccccgaaatgcgttgaggcgcagcggttgacgaatgggctat 871 Query: 347 ctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 406 |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| Sbjct: 872 ctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaact 931 Query: 407 ctgaatactag 417 ||||||||| Sbjct: 932 aagaatactag 942 Score = 83.8 bits (42), Expect = 5e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 43 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 100 ||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct: 566 tgaccgcgttcctgttgaagaatgagccggcgacttatagaaagtggcttggttaagg 623 Score = 63.9 bits (32), Expect = 4e-07 Identities = 32/32 (100%) Strand = Plus / Plus Query: 451 ccagtgagacgatgggggataagcttcatcgt 482 |||||||||||||||||||||||||||||||| Sbjct: 960 ccagtgagacgatgggggataagcttcatcgt 991
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 335 bits (169), Expect = 8e-89 Identities = 379/445 (85%), Gaps = 8/445 (1%) Strand = Plus / Plus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| | | | Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccg-tatc 835 Query: 340 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 400 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 457 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 458 gacgatgggggataagcttcatcgt 482 ||| ||||||||||||||||||||| Sbjct: 956 gaccatgggggataagcttcatcgt 980
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 329 bits (166), Expect = 5e-87 Identities = 290/329 (88%), Gaps = 3/329 (0%) Strand = Plus / Plus Query: 156 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 215 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 216 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 275 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 276 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 335 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 336 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 395 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 396 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 453 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 454 gtgagacgatgggggataagcttcatcgt 482 | ||||| ||||||||||||||||||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgt 980 Score = 60.0 bits (30), Expect = 7e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||| ||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccacgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 100 gg 101 || Sbjct: 602 gg 603
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 327 bits (165), Expect = 2e-86 Identities = 277/313 (88%), Gaps = 1/313 (0%) Strand = Plus / Plus Query: 112 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 171 |||| |||| |||||||||| |||| || | ||||| |||||||| ||||||||||||| Sbjct: 592 accgaagccatagcgaaagcaagtcataccaaggcgaatgtcactgtttatggacccgaa 651 Query: 172 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 231 || |||||||||||||||| ||||||||||| |||| |||||| || ||||||||||| Sbjct: 652 cccgggtgatctatccatggccaggatgaagtttgggtgaaaccaaatggaggtccgaac 711 Query: 232 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 291 |||||| ||||||| || || |||||||| ||||| ||||||||||||||||||||||| Sbjct: 712 cgactggtgttgaaaaaccaacggatgagctgtggataggggtgaaatgccactcgaact 771 Query: 292 cagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctag 350 | ||||||||||||||||||||||||||||||||||||||| ||||||| ||| || ||| Sbjct: 772 cggagctagctggttctccccgaaatgcgttgaggcgcagcggttgactagactatttag 831 Query: 351 gggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctga 410 |||||||||||||||||||||||||||| | | ||||||||||| || ||||||||||| Sbjct: 832 gggtaaagcactgtttcggtgcgggctgtgaaaacggtaccaaattgatgcaaactctga 891 Query: 411 atactagatatga 423 |||||| |||||| Sbjct: 892 atactaaatatga 904 Score = 103 bits (52), Expect = 5e-19 Identities = 58/60 (96%) Strand = Plus / Plus Query: 41 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 100 ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| Sbjct: 528 tctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaagg 587 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 450 gccagtgagacgatgggggataagcttcatcgt 482 |||||||||||| ||||||||||||| |||||| Sbjct: 915 gccagtgagacggtgggggataagctccatcgt 947
>gb|U30821.1|CPU30821 Cyanophora paradoxa cyanelle, complete genome Length = 135599 Score = 323 bits (163), Expect = 3e-85 Identities = 328/378 (86%), Gaps = 5/378 (1%) Strand = Plus / Minus Query: 41 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 100 |||||| |||||||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 114870 tctgactgcgtgcctgttgaagaatgagccggcgacttataggtagtggca-ggttaagg 114812 Query: 101 gaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt-gtcactgct 159 || | | || |||||| |||||||||||||| | |||| ||| || |||||| | Sbjct: 114811 taaagaatt--actggagccctagcgaaagcgagtttgtatagagcgttttgtcactatt 114754 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 ||| |||||||||| |||||||||| ||||| ||||| |||||||||| | |||||||| Sbjct: 114753 tatagacccgaacccgggtgatctaaccatggccagggtgaagcttgggtaaaactaagt 114694 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 |||| |||||| || | |||||||| ||| | ||||||||||||||||||||||||||| Sbjct: 114693 ggaggcccgaactgattaatgttgaaaaattaccggatgagttgtggttaggggtgaaat 114634 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 |||| |||||||| ||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 114633 gccaatcgaacccggagctagctggttctccccgaaatgtgttgaggcgcagcggttgag 114574 Query: 340 tggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 398 | | | ||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 114573 attataacttaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcga 114514 Query: 399 ggcaaactctgaatacta 416 |||||||||||||||||| Sbjct: 114513 ggcaaactctgaatacta 114496 Score = 323 bits (163), Expect = 3e-85 Identities = 328/378 (86%), Gaps = 5/378 (1%) Strand = Plus / Plus Query: 41 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 100 |||||| |||||||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 2647 tctgactgcgtgcctgttgaagaatgagccggcgacttataggtagtggca-ggttaagg 2705 Query: 101 gaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt-gtcactgct 159 || | | || |||||| |||||||||||||| | |||| ||| || |||||| | Sbjct: 2706 taaagaatt--actggagccctagcgaaagcgagtttgtatagagcgttttgtcactatt 2763 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 ||| |||||||||| |||||||||| ||||| ||||| |||||||||| | |||||||| Sbjct: 2764 tatagacccgaacccgggtgatctaaccatggccagggtgaagcttgggtaaaactaagt 2823 Query: 220 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 279 |||| |||||| || | |||||||| ||| | ||||||||||||||||||||||||||| Sbjct: 2824 ggaggcccgaactgattaatgttgaaaaattaccggatgagttgtggttaggggtgaaat 2883 Query: 280 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 339 |||| |||||||| ||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 2884 gccaatcgaacccggagctagctggttctccccgaaatgtgttgaggcgcagcggttgag 2943 Query: 340 tggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 398 | | | ||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 2944 attataacttaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcga 3003 Query: 399 ggcaaactctgaatacta 416 |||||||||||||||||| Sbjct: 3004 ggcaaactctgaatacta 3021
>emb|AM084275.1| Cyanoptyche gloeocystis cyanelle 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 34.90 Length = 4586 Score = 317 bits (160), Expect = 2e-83 Identities = 322/371 (86%), Gaps = 5/371 (1%) Strand = Plus / Plus Query: 48 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 107 |||||||||||||||||||||||||||||| ||||| |||||| |||||||| || | Sbjct: 2385 gcgtgcctgttgaagaatgagccggcgacttataggtagtggca-ggttaaggtaatg-- 2441 Query: 108 acccaccggagccgtagcgaaagcgagtcttaatagggcgatt-gtcactgcttatggac 166 | || |||||| |||||||||||||| ||||||| ||| || |||||| |||| ||| Sbjct: 2442 atttactggagccatagcgaaagcgagttttaatagagcgtttagtcactatttatagac 2501 Query: 167 ccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtc 226 ||||||| |||||||||| ||||| ||||| |||||||| | | ||||||| |||| | Sbjct: 2502 ccgaacccgggtgatctaaccatggccagggtgaagcttaggtaaaactaaatggaggcc 2561 Query: 227 cgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactc 286 |||||||| ||||||||| |||| ||||||||||||||||||||||||||||||| || Sbjct: 2562 cgaaccgatcgatgttgaaaaatcgccggatgagttgtggttaggggtgaaatgccaatc 2621 Query: 287 gaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctggaca 345 |||||| ||||||||||||||||||||||||||||||||||||||| ||||| | | Sbjct: 2622 gaacccggagctagctggttctccccgaaatgcgttgaggcgcagcggttgatgttataa 2681 Query: 346 tctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 405 | |||||||||||||||||||||||||||||| || ||| |||||||||||||||||||| Sbjct: 2682 tttaggggtaaagcactgtttcggtgcgggctacgagagtggtaccaaatcgaggcaaac 2741 Query: 406 tctgaatacta 416 ||||||||||| Sbjct: 2742 tctgaatacta 2752
>gb|DQ160149.1| Taraxacum officinale To116-3 mRNA, partial sequence Length = 187 Score = 315 bits (159), Expect = 7e-83 Identities = 174/179 (97%) Strand = Plus / Plus Query: 105 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 164 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 5 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 64 Query: 165 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 224 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 65 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 124 Query: 225 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 283 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 183
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 315 bits (159), Expect = 7e-83 Identities = 329/382 (86%), Gaps = 9/382 (2%) Strand = Plus / Plus Query: 41 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 100 |||||||||||||||||||||||||||||||||||||| || | |||||||||||||||| Sbjct: 538 tctgaccgcgtgcctgttgaagaatgagccggcgactcctaagaagtggcttggttaagg 597 Query: 101 gaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcga--ttgtcactgc 158 | ||| | ||| |||| ||||||||| ||||| |||||||| | | |||||| Sbjct: 598 g---ggattac-ccgaagccaaagcgaaagcaagtctgaatagggcaaaatcgtcacttt 653 Query: 159 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 218 ||| ||||||||||| |||||||||| ||||| |||||||||||||||| | |||| ||| Sbjct: 654 ttagggacccgaacccgggtgatctaaccatggccaggatgaagcttgggtaaaaccaag 713 Query: 219 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 278 ||||||||||||||| ||||||||| |||| ||||||||| ||||||||||||||||| Sbjct: 714 tggaggtccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaa 773 Query: 279 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt-- 336 ||||| |||||| | ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 774 tgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttgg 833 Query: 337 -gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 395 ||| || |||||||||||||||||||||||||||||||| || || |||||||||| Sbjct: 834 cgacgggctgtctaggggtaaagcactgtttcggtgcgggctacgaaagtggtaccaaat 893 Query: 396 cgaggcaaactctgaatactag 417 || ||||||| ||||||||| Sbjct: 894 cgtagcaaactaagaatactag 915 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 451 ccagtgagacgatgggggataagcttcat 479 |||||||||| ||||||||||||||||| Sbjct: 933 ccagtgagacagtgggggataagcttcat 961
>gb|AC147496.19| Medicago truncatula clone mth2-6i7, complete sequence Length = 148736 Score = 311 bits (157), Expect = 1e-81 Identities = 190/201 (94%) Strand = Plus / Minus Query: 221 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 280 ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| Sbjct: 141909 gaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaatg 141850 Query: 281 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 340 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 141849 ccactcgaacccagagctagctggttctccctgaaatgcgttgaggcgcagcagttgact 141790 Query: 341 ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 400 |||||| ||||||||||||| |||||||| ||||| ||| ||||||| ||||||||||| Sbjct: 141789 ggacatttaggggtaaagcattgtttcggcacgggccgcgggagcggttccaaatcgagg 141730 Query: 401 caaactctgaatactagatat 421 ||||||||||||| ||||||| Sbjct: 141729 caaactctgaatattagatat 141709
>gb|L43542.1|TBXCPRRNL Trebouxia aggregata chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5398 Score = 307 bits (155), Expect = 2e-80 Identities = 246/274 (89%), Gaps = 3/274 (1%) Strand = Plus / Plus Query: 148 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 207 ||||||||| |||||||||||||||| |||||||||| ||||| |||||||||||||||| Sbjct: 800 attgtcacttcttatggacccgaacccgggtgatctaaccatggccaggatgaagcttgg 859 Query: 208 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 267 | |||| ||| ||||||||||||||| ||||||||| |||| |||||||||||||||| Sbjct: 860 gtaaaaccaagtggaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggt 919 Query: 268 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 327 |||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 920 taggggtgaaatgccaatcgaacctggagctagctggatctccccgaaatgcgttgaggc 979 Query: 328 gcagcagttgac--tggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgag 384 ||||| ||| || ||| | ||||||||||||||||||||||||||||||||||| ||| Sbjct: 980 gcagcggttaacgatgggctgtctaggggtaaagcactgtttcggtgcgggctgcgagag 1039 Query: 385 cggtaccaaatcgaggcaaactctgaatactaga 418 ||||||||||||| ||||||| |||||||||| Sbjct: 1040 cggtaccaaatcgtagcaaactaagaatactaga 1073 Score = 91.7 bits (46), Expect = 2e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 43 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 100 ||||||||||||||||||||||||||||||||||| ||| | |||||||||||||||| Sbjct: 693 tgaccgcgtgcctgttgaagaatgagccggcgacttataaggagtggcttggttaagg 750 Score = 48.1 bits (24), Expect = 0.027 Identities = 30/32 (93%) Strand = Plus / Plus Query: 451 ccagtgagacgatgggggataagcttcatcgt 482 ||||||||||| ||||||||||||| |||||| Sbjct: 1090 ccagtgagacggtgggggataagctccatcgt 1121
>emb|AJ245645.1|PWI245645 Prototheca wickerhamii chloroplast partial genome Length = 22085 Score = 299 bits (151), Expect = 4e-78 Identities = 237/263 (90%), Gaps = 2/263 (0%) Strand = Plus / Plus Query: 164 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 223 |||||||||| |||||||||| |||||||||||||||||||||| ||| || ||| || Sbjct: 6375 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtgataccaagtgaag 6434 Query: 224 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 283 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 6435 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 6494 Query: 284 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 342 |||||||| |||||||||||||||||||||||||||||||||||||||||| | || | Sbjct: 6495 gtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatctag 6554 Query: 343 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 401 | |||||||||||||||||||||||||||||||||| | || ||||||||||||| ||| Sbjct: 6555 tctatctaggggtaaagcactgtttcggtgcgggctgtgagaacggtaccaaatcgtggc 6614 Query: 402 aaactctgaatactagatatgac 424 ||||||||||||||||| ||||| Sbjct: 6615 aaactctgaatactagaaatgac 6637 Score = 63.9 bits (32), Expect = 4e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 42 ctgaccgcgtgcctgttgaagaatgagccggcgact 77 |||||||| ||||||||||||||||||||||||||| Sbjct: 6234 ctgaccgcatgcctgttgaagaatgagccggcgact 6269 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 117 agccgtagcgaaagcgagtcttaatagggcgat 149 ||||||||| ||||||||||| ||||||||||| Sbjct: 6304 agccgtagcaaaagcgagtctgaatagggcgat 6336
>emb|AJ222802.1|CHPW5KB Prototheca wickerhamii 5.0 kb plastid DNA fragment of ribosomal RNA genecluster Length = 5001 Score = 299 bits (151), Expect = 4e-78 Identities = 237/263 (90%), Gaps = 2/263 (0%) Strand = Plus / Plus Query: 164 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 223 |||||||||| |||||||||| |||||||||||||||||||||| ||| || ||| || Sbjct: 3438 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtgataccaagtgaag 3497 Query: 224 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 283 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 3498 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 3557 Query: 284 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 342 |||||||| |||||||||||||||||||||||||||||||||||||||||| | || | Sbjct: 3558 gtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatctag 3617 Query: 343 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 401 | |||||||||||||||||||||||||||||||||| | || ||||||||||||| ||| Sbjct: 3618 tctatctaggggtaaagcactgtttcggtgcgggctgtgagaacggtaccaaatcgtggc 3677 Query: 402 aaactctgaatactagatatgac 424 ||||||||||||||||| ||||| Sbjct: 3678 aaactctgaatactagaaatgac 3700 Score = 63.9 bits (32), Expect = 4e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 42 ctgaccgcgtgcctgttgaagaatgagccggcgact 77 |||||||| ||||||||||||||||||||||||||| Sbjct: 3297 ctgaccgcatgcctgttgaagaatgagccggcgact 3332 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 117 agccgtagcgaaagcgagtcttaatagggcgat 149 ||||||||| ||||||||||| ||||||||||| Sbjct: 3367 agccgtagcaaaagcgagtctgaatagggcgat 3399
>gb|L42851.1|PTOCPRGOL Prototheca wickerhamii large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2715 Score = 299 bits (151), Expect = 4e-78 Identities = 237/263 (90%), Gaps = 2/263 (0%) Strand = Plus / Plus Query: 164 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 223 |||||||||| |||||||||| |||||||||||||||||||||| ||| || ||| || Sbjct: 726 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtgataccaagtgaag 785 Query: 224 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 283 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 786 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 845 Query: 284 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 342 |||||||| |||||||||||||||||||||||||||||||||||||||||| | || | Sbjct: 846 gtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatctag 905 Query: 343 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 401 | |||||||||||||||||||||||||||||||||| | || ||||||||||||| ||| Sbjct: 906 tctatctaggggtaaagcactgtttcggtgcgggctgtgagaacggtaccaaatcgtggc 965 Query: 402 aaactctgaatactagatatgac 424 ||||||||||||||||| ||||| Sbjct: 966 aaactctgaatactagaaatgac 988 Score = 63.9 bits (32), Expect = 4e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 42 ctgaccgcgtgcctgttgaagaatgagccggcgact 77 |||||||| ||||||||||||||||||||||||||| Sbjct: 585 ctgaccgcatgcctgttgaagaatgagccggcgact 620 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 117 agccgtagcgaaagcgagtcttaatagggcgat 149 ||||||||| ||||||||||| ||||||||||| Sbjct: 655 agccgtagcaaaagcgagtctgaatagggcgat 687
>gb|AY835431.1| Pseudendoclonium akinetum chloroplast, complete genome Length = 195867 Score = 295 bits (149), Expect = 7e-77 Identities = 323/377 (85%), Gaps = 8/377 (2%) Strand = Plus / Plus Query: 43 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 102 ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| | Sbjct: 192429 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggcttggttaaggta 192488 Query: 103 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 162 | || ||||||||| ||||||||| ||||| ||||||||| |||||||| ||||| Sbjct: 192489 a---aat--accggagccaaagcgaaagcaagtctgaatagggcgcttgtcacttcttat 192543 Query: 163 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 222 ||||||||||| | |||||||| ||||| |||||||||| ||||| | | || || || Sbjct: 192544 ggacccgaacccgagtgatctaaccatggccaggatgaatcttgggtaacaccaaatgga 192603 Query: 223 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 282 | |||||||||| ||||||||| |||| ||||||||| |||||||||||||||||| || Sbjct: 192604 agaccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaattcc 192663 Query: 283 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga--ct 340 | |||||| | ||||||||||| ||||| ||||||| ||||||||||||| ||||| | Sbjct: 192664 agtcgaactcggagctagctggatctcctcgaaatgtgttgaggcgcagcggttgatgat 192723 Query: 341 ggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 || | || ||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 192724 gggctatttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtactaaatcgtc 192783 Query: 400 gcaaactctgaatacta 416 ||||||| |||||||| Sbjct: 192784 gcaaactaagaatacta 192800 Score = 295 bits (149), Expect = 7e-77 Identities = 323/377 (85%), Gaps = 8/377 (2%) Strand = Plus / Minus Query: 43 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 102 ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| | Sbjct: 144353 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggcttggttaaggta 144294 Query: 103 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 162 | || ||||||||| ||||||||| ||||| ||||||||| |||||||| ||||| Sbjct: 144293 a---aat--accggagccaaagcgaaagcaagtctgaatagggcgcttgtcacttcttat 144239 Query: 163 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 222 ||||||||||| | |||||||| ||||| |||||||||| ||||| | | || || || Sbjct: 144238 ggacccgaacccgagtgatctaaccatggccaggatgaatcttgggtaacaccaaatgga 144179 Query: 223 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 282 | |||||||||| ||||||||| |||| ||||||||| |||||||||||||||||| || Sbjct: 144178 agaccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaattcc 144119 Query: 283 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga--ct 340 | |||||| | ||||||||||| ||||| ||||||| ||||||||||||| ||||| | Sbjct: 144118 agtcgaactcggagctagctggatctcctcgaaatgtgttgaggcgcagcggttgatgat 144059 Query: 341 ggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 || | || ||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 144058 gggctatttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtactaaatcgtc 143999 Query: 400 gcaaactctgaatacta 416 ||||||| |||||||| Sbjct: 143998 gcaaactaagaatacta 143982
>dbj|AB061306.1| Citrus jambhiri mitochondrial ACRS gene for ACR toxin-sensitivity inducing protein, complete cds Length = 2303 Score = 293 bits (148), Expect = 3e-76 Identities = 178/188 (94%), Gaps = 5/188 (2%) Strand = Plus / Minus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 99 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 183 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 124 Query: 100 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 159 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 123 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 69 Query: 160 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 219 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 68 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 9 Query: 220 agaggtcc 227 ||||||| Sbjct: 8 ggaggtcc 1
>emb|AM084277.1| Porphyridium aerugineum chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene and ITS1, strain SAG 43.94 Length = 4290 Score = 289 bits (146), Expect = 4e-75 Identities = 263/302 (87%) Strand = Plus / Plus Query: 114 cggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacc 173 ||||||| |||||||||||||||| | |||||| | |||||| |||| |||||||||| Sbjct: 2189 cggagccatagcgaaagcgagtctgataagggcgttagtcactatttatagacccgaacc 2248 Query: 174 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 233 || ||||||| |||| |||||||||||||| | | | ||| || ||||||||||||| Sbjct: 2249 cggatgatctagtcatggccaggatgaagcttaggtaacactgagtggaggtccgaaccg 2308 Query: 234 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 293 |||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||| || Sbjct: 2309 actgatgttgaaaaatcagcggatgagttgtgattaggggtgaaatgccaatcgaatccg 2368 Query: 294 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 353 ||||||||||||||||||||||||||||||||||||||| ||| | | | | |||| Sbjct: 2369 gagctagctggttctccccgaaatgcgttgaggcgcagcggttaaatttaagcttggggg 2428 Query: 354 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 413 ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| Sbjct: 2429 taaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgcaaactctgaata 2488 Query: 414 ct 415 || Sbjct: 2489 ct 2490 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 41 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 90 ||||||| ||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 2121 tctgacctcgtgcctgttgaagaatgagccggcgacttataggtagtggc 2170 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 451 ccagtgagacgatgggggataagcttcat 479 |||||||||| ||||||||||||||||| Sbjct: 2505 ccagtgagacagtgggggataagcttcat 2533
>gb|L42845.1|FRICPRGOL Friedmannia israeliensis large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2704 Score = 287 bits (145), Expect = 2e-74 Identities = 240/271 (88%), Gaps = 3/271 (1%) Strand = Plus / Plus Query: 151 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 210 |||||| |||||||||||||||| |||||||||| ||||| |||||||||||||||| | Sbjct: 680 gtcacttcttatggacccgaacccgggtgatctaaccatggccaggatgaagcttgggta 739 Query: 211 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 270 |||| ||| || |||||||||||| ||||||||| |||| ||||||||| ||||||||| Sbjct: 740 aaaccaagtggaagtccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttag 799 Query: 271 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 330 ||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 800 gggtgaaatgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgca 859 Query: 331 gcagt---tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 387 || || ||| || ||||||||||||||||||||||||||||||||||| |||||| Sbjct: 860 gcggttaatgatgggcggtctaggggtaaagcactgtttcggtgcgggctgcgagagcgg 919 Query: 388 taccaaatcgaggcaaactctgaatactaga 418 |||||||||| ||||||| |||||||||| Sbjct: 920 taccaaatcgtagcaaactaagaatactaga 950 Score = 89.7 bits (45), Expect = 8e-15 Identities = 54/57 (94%) Strand = Plus / Plus Query: 42 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 98 |||||||||||||||||||||||||||||||||||| ||| | |||||||||||||| Sbjct: 571 ctgaccgcgtgcctgttgaagaatgagccggcgacttataaggagtggcttggttaa 627 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 451 ccagtgagacgatgggggataagcttcatcgt 482 ||||||||||| |||||||||||||||||||| Sbjct: 966 ccagtgagacggtgggggataagcttcatcgt 997
>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3669 Score = 285 bits (144), Expect = 7e-74 Identities = 271/311 (87%), Gaps = 3/311 (0%) Strand = Plus / Plus Query: 113 ccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 170 ||||||||| ||||||||| ||||| ||||||||||| |||| || | ||||||| Sbjct: 621 ccggagccgaagcgaaagcaagtctgaatagggcgataaagtcatattttctagacccga 680 Query: 171 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 230 ||| |||||||||| |||||||||||||||||||||| ||| || ||| ||||||||| Sbjct: 681 acccgggtgatctaaccatgaccaggatgaagcttgggtgacaccaagtgaaggtccgaa 740 Query: 231 ccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 290 ||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| |||||| Sbjct: 741 ccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaataccagtcgaac 800 Query: 291 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctggacatcta 349 | ||||||||||||||||||||||||||||||||||||||| ||| | || | || Sbjct: 801 tcggagctagctggttctccccgaaatgcgttgaggcgcagcggtttataaggctgttta 860 Query: 350 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 409 ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 861 ggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactctg 920 Query: 410 aatactagata 420 ||||||||||| Sbjct: 921 aatactagata 931 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 42 ctgaccgcgtgcctgttgaagaatgagccggcgact 77 |||||||||||||||||||||||||||||||||||| Sbjct: 554 ctgaccgcgtgcctgttgaagaatgagccggcgact 589 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 450 gccagtgagacgatgggggataagcttcatcgt 482 |||||||||||| |||||||||||||||||||| Sbjct: 944 gccagtgagacggtgggggataagcttcatcgt 976
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 285 bits (144), Expect = 7e-74 Identities = 271/311 (87%), Gaps = 3/311 (0%) Strand = Plus / Plus Query: 113 ccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 170 ||||||||| ||||||||| ||||| ||||||||||| |||| || | ||||||| Sbjct: 25430 ccggagccgaagcgaaagcaagtctgaatagggcgataaagtcatattttctagacccga 25489 Query: 171 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 230 ||| |||||||||| |||||||||||||||||||||| ||| || ||| ||||||||| Sbjct: 25490 acccgggtgatctaaccatgaccaggatgaagcttgggtgacaccaagtgaaggtccgaa 25549 Query: 231 ccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 290 ||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| |||||| Sbjct: 25550 ccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaataccagtcgaac 25609 Query: 291 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctggacatcta 349 | ||||||||||||||||||||||||||||||||||||||| ||| | || | || Sbjct: 25610 tcggagctagctggttctccccgaaatgcgttgaggcgcagcggtttataaggctgttta 25669 Query: 350 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 409 ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 25670 ggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactctg 25729 Query: 410 aatactagata 420 ||||||||||| Sbjct: 25730 aatactagata 25740 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 42 ctgaccgcgtgcctgttgaagaatgagccggcgact 77 |||||||||||||||||||||||||||||||||||| Sbjct: 25363 ctgaccgcgtgcctgttgaagaatgagccggcgact 25398 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 450 gccagtgagacgatgggggataagcttcatcgt 482 |||||||||||| |||||||||||||||||||| Sbjct: 25753 gccagtgagacggtgggggataagcttcatcgt 25785
>gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosomal RNA gene, partial sequence Length = 2364 Score = 283 bits (143), Expect = 3e-73 Identities = 264/303 (87%), Gaps = 1/303 (0%) Strand = Plus / Plus Query: 113 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 172 |||||||| || |||| ||||||| |||||||||| ||||| |||| ||||||||| Sbjct: 249 ccggagccaaagggaaaccgagtctgaatagggcgaaagtcacattttatagacccgaac 308 Query: 173 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 232 | |||||||||| ||||| |||||||||||||||| | | || ||| |||||||||||| Sbjct: 309 ccgggtgatctaaccatgtccaggatgaagcttgggtaacaccaagtggaggtccgaacc 368 Query: 233 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 292 ||||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| Sbjct: 369 gactgatgttgaaaaatcagcggatgaggtgtggttaggggtgaaatgccaatcgaaccc 428 Query: 293 agagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctag-g 351 ||||||||||||||||||||||||| ||| ||||||||| || | |||||| | Sbjct: 429 ggagctagctggttctccccgaaatgtgtttaggcgcagcggtaacgattaaatctaggg 488 Query: 352 ggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaa 411 ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||| Sbjct: 489 ggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactcagaa 548 Query: 412 tac 414 ||| Sbjct: 549 tac 551 Score = 60.0 bits (30), Expect = 7e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 50 gtgcctgttgaagaatgagccggcgactcatagg 83 |||||||||||||||||||||||||||| ||||| Sbjct: 191 gtgcctgttgaagaatgagccggcgacttatagg 224
>gb|L42849.1|PEDCPRGOL Pedinomonas minor large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2632 Score = 283 bits (143), Expect = 3e-73 Identities = 266/305 (87%), Gaps = 4/305 (1%) Strand = Plus / Plus Query: 117 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 176 ||||||||||||||||||||| |||||||||| |||||| |||| |||||||||| || Sbjct: 636 agccgtagcgaaagcgagtctgaatagggcgac-gtcactttttatagacccgaacccgg 694 Query: 177 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 236 |||||||| ||||| |||||||||||||||| | | | ||| ||||||||||||||| Sbjct: 695 gtgatctaaccatggccaggatgaagcttgggtaacaacaagtggaggtccgaaccgacc 754 Query: 237 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 296 ||||||||| |||| ||||||||| |||||||||||||||||| ||| |||||| | ||| Sbjct: 755 gatgttgaaaaatcggcggatgagctgtggttaggggtgaaataccaatcgaactcggag 814 Query: 297 ctagctggttctccccgaaatgcgttgaggcgcagcagt---tgactggacatctagggg 353 |||||||||||||||||||||||||||||||||||| || ||| || |||||||| Sbjct: 815 ctagctggttctccccgaaatgcgttgaggcgcagcggtaaatgatgggctgtctagggg 874 Query: 354 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 413 |||||| |||||||||||||||||||| ||||||||||||||| |||||||| ||||| Sbjct: 875 taaagctctgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactaagaata 934 Query: 414 ctaga 418 ||||| Sbjct: 935 ctaga 939 Score = 101 bits (51), Expect = 2e-18 Identities = 57/59 (96%) Strand = Plus / Plus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 98 |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 560 ctctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcttggttaa 618 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 451 ccagtgagacgatgggggataagcttcatcgt 482 ||||||||||| |||||||||||||||||||| Sbjct: 957 ccagtgagacggtgggggataagcttcatcgt 988
>gb|L42992.1|TESCPRGOL Tetraselmis carteriiformis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2552 Score = 283 bits (143), Expect = 3e-73 Identities = 260/297 (87%), Gaps = 4/297 (1%) Strand = Plus / Plus Query: 123 agcgaaagcgagtcttaa-tagggcgattgtcactgcttatggacccgaacctgggtgat 181 ||||||||||||||| || || |||| | |||| | |||||||||||||||||||||||| Sbjct: 620 agcgaaagcgagtctgaaatacggcgctcgtcatttcttatggacccgaacctgggtgat 679 Query: 182 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 241 ||| ||||||||||| |||||||||| | |||| ||| || | ||||||| |||||||| Sbjct: 680 ctaaccatgaccagggtgaagcttgggtaaaaccaagtggaagcccgaacccactgatgt 739 Query: 242 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 301 |||| |||||| ||||||||||||||||| |||||||||||| |||||| |||||||||| Sbjct: 740 tgaaaaatcaggggatgagttgtggttagcggtgaaatgccaatcgaactcagagctagc 799 Query: 302 tggttctccccgaaatgcgttgaggcgcagc---agttgactggacatctaggggtaaag 358 ||| ||||||||||||||||||||||||||| ||||| || | || |||||||||| Sbjct: 800 tggatctccccgaaatgcgttgaggcgcagcggttgttgatgggtcgtcaaggggtaaag 859 Query: 359 cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 415 |||||||||||||||||||||| ||||||||||||||| |||||||| ||||||| Sbjct: 860 cactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactaagaatact 916 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 43 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 83 ||||||||| ||||||||||||||| ||||||||| ||||| Sbjct: 543 tgaccgcgttcctgttgaagaatgaaccggcgacttatagg 583 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 451 ccagtgagacgatgggggataagcttcat 479 |||||||||| ||||||||||||||||| Sbjct: 935 ccagtgagacagtgggggataagcttcat 963
>gb|AF393605.1| Pedinomonas minor small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; chloroplast genes for chloroplast products Length = 5057 Score = 283 bits (143), Expect = 3e-73 Identities = 266/305 (87%), Gaps = 4/305 (1%) Strand = Plus / Plus Query: 117 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 176 ||||||||||||||||||||| |||||||||| |||||| |||| |||||||||| || Sbjct: 2518 agccgtagcgaaagcgagtctgaatagggcgac-gtcactttttatagacccgaacccgg 2576 Query: 177 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 236 |||||||| ||||| |||||||||||||||| | | | ||| ||||||||||||||| Sbjct: 2577 gtgatctaaccatggccaggatgaagcttgggtaacaacaagtggaggtccgaaccgacc 2636 Query: 237 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 296 ||||||||| |||| ||||||||| |||||||||||||||||| ||| |||||| | ||| Sbjct: 2637 gatgttgaaaaatcggcggatgagctgtggttaggggtgaaataccaatcgaactcggag 2696 Query: 297 ctagctggttctccccgaaatgcgttgaggcgcagcagt---tgactggacatctagggg 353 |||||||||||||||||||||||||||||||||||| || ||| || |||||||| Sbjct: 2697 ctagctggttctccccgaaatgcgttgaggcgcagcggtaaatgatgggctgtctagggg 2756 Query: 354 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 413 |||||| |||||||||||||||||||| ||||||||||||||| |||||||| ||||| Sbjct: 2757 taaagctctgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactaagaata 2816 Query: 414 ctaga 418 ||||| Sbjct: 2817 ctaga 2821 Score = 101 bits (51), Expect = 2e-18 Identities = 57/59 (96%) Strand = Plus / Plus Query: 40 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 98 |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 2442 ctctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcttggttaa 2500 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 451 ccagtgagacgatgggggataagcttcatcgt 482 ||||||||||| |||||||||||||||||||| Sbjct: 2839 ccagtgagacggtgggggataagcttcatcgt 2870
>dbj|AP006715.1| Porphyra yezoensis chloroplast DNA, complete genome Length = 191952 Score = 281 bits (142), Expect = 1e-72 Identities = 254/290 (87%), Gaps = 1/290 (0%) Strand = Plus / Plus Query: 126 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 185 ||||||||| | ||||| ||| | |||||| |||| |||||||||| || ||||||| Sbjct: 189567 gaaagcgagcttgaatagagcgttagtcactatttatagacccgaacccggatgatctag 189626 Query: 186 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 245 ||||| ||||| |||||||| | | | |||||| ||||||||||||||||||||||||| Sbjct: 189627 ccatggccagggtgaagcttaggtaacactaagtggaggtccgaaccgactgatgttgaa 189686 Query: 246 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 305 |||||||||||||||||||| |||||||||||||||| ||||| || |||||||||||| Sbjct: 189687 aaatcagcggatgagttgtggctaggggtgaaatgccaatcgaatccggagctagctggt 189746 Query: 306 tctccccgaaatgcgttgaggcgcagcagttgactggacatc-taggggtaaagcactgt 364 ||||||||||||| ||||||||||||| ||||| ||| | ||||||||||||||| Sbjct: 189747 tctccccgaaatgtgttgaggcgcagcggttgatgcttaatcttgggggtaaagcactgt 189806 Query: 365 ttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 414 |||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 189807 ttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 189856 Score = 281 bits (142), Expect = 1e-72 Identities = 254/290 (87%), Gaps = 1/290 (0%) Strand = Plus / Plus Query: 126 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 185 ||||||||| | ||||| ||| | |||||| |||| |||||||||| || ||||||| Sbjct: 150994 gaaagcgagcttgaatagagcgttagtcactatttatagacccgaacccggatgatctag 151053 Query: 186 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 245 ||||| ||||| |||||||| | | | |||||| ||||||||||||||||||||||||| Sbjct: 151054 ccatggccagggtgaagcttaggtaacactaagtggaggtccgaaccgactgatgttgaa 151113 Query: 246 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 305 |||||||||||||||||||| |||||||||||||||| ||||| || |||||||||||| Sbjct: 151114 aaatcagcggatgagttgtggctaggggtgaaatgccaatcgaatccggagctagctggt 151173 Query: 306 tctccccgaaatgcgttgaggcgcagcagttgactggacatc-taggggtaaagcactgt 364 ||||||||||||| ||||||||||||| ||||| ||| | ||||||||||||||| Sbjct: 151174 tctccccgaaatgtgttgaggcgcagcggttgatgcttaatcttgggggtaaagcactgt 151233 Query: 365 ttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 414 |||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 151234 ttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 151283 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 49 cgtgcctgttgaagaatgagccggcgactcatag 82 ||||| ||||||||||||||||||||||| |||| Sbjct: 189494 cgtgcatgttgaagaatgagccggcgacttatag 189527 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 49 cgtgcctgttgaagaatgagccggcgactcatag 82 ||||| ||||||||||||||||||||||| |||| Sbjct: 150921 cgtgcatgttgaagaatgagccggcgacttatag 150954 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 451 ccagtgagacgatgggggataagcttcat 479 |||||||||| ||||||||||||||||| Sbjct: 189872 ccagtgagacagtgggggataagcttcat 189900 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 451 ccagtgagacgatgggggataagcttcat 479 |||||||||| ||||||||||||||||| Sbjct: 151299 ccagtgagacagtgggggataagcttcat 151327
>gb|AY008341.1| Trichosarcina mucosa large subunit ribosomal RNA (rrnL) gene, partial sequence; and rrnL and putative site-specific DNA endonuclease (rrnL) genes, complete cds; chloroplast genes for chloroplast products Length = 4502 Score = 280 bits (141), Expect = 4e-72 Identities = 321/377 (85%), Gaps = 8/377 (2%) Strand = Plus / Plus Query: 43 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 102 ||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||| | Sbjct: 598 tgaccgcatgcctgttgaagaatgagccggcgacttatagggagtggcttggttaaggca 657 Query: 103 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 162 | || || |||||| ||||||||| ||||| ||||||||| |||||||| |||| Sbjct: 658 aa--aagcc---ggagccaaagcgaaagcaagtctgaatagggcgcttgtcactttttat 712 Query: 163 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 222 ||||||||||||| |||||||| ||||| |||||||||| ||||| | | || || || Sbjct: 713 ggacccgaacctgagtgatctaaccatggccaggatgaatcttgggtaacaccaaatgga 772 Query: 223 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 282 | |||||||||| ||||||||| |||| ||||||||| |||||||||||||||||| || Sbjct: 773 agaccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaattcc 832 Query: 283 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga--ct 340 | |||||| ||||||||||||| ||||| ||||||| ||||||||||||| ||||| | Sbjct: 833 agtcgaactcagagctagctggatctcctcgaaatgtgttgaggcgcagcggttgatgat 892 Query: 341 ggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 399 || | | ||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 893 gggctagttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtactaaatcgtc 952 Query: 400 gcaaactctgaatacta 416 ||||||| |||||||| Sbjct: 953 gcaaactaagaatacta 969
>gb|U38804.1|PPU38804 Porphyra purpurea chloroplast, complete genome Length = 191028 Score = 278 bits (140), Expect = 2e-71 Identities = 315/369 (85%), Gaps = 7/369 (1%) Strand = Plus / Plus Query: 50 gtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaac 109 |||| ||||||||||||||||||||||| ||| | |||||| |||||||| || | | Sbjct: 188572 gtgcatgttgaagaatgagccggcgacttataagtagtggca-ggttaaggtaaagaat- 188629 Query: 110 ccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccg 169 |||| |||| || ||||||||| | ||||| ||| | |||||| |||| |||||| Sbjct: 188630 --accgaagccaaagtgaaagcgagcttgaatagagcgttggtcactatttatagacccg 188687 Query: 170 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccga 229 |||| || ||||||| ||||| ||||| |||||||| | | | |||||| ||||||||| Sbjct: 188688 aacccggatgatctagccatggccagggtgaagcttaggtaacactaagtggaggtccga 188747 Query: 230 accgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaa 289 ||||||| |||||||| ||| |||||||||||||||| |||||||||||||||| ||||| Sbjct: 188748 accgactaatgttgaaaaattagcggatgagttgtggctaggggtgaaatgccaatcgaa 188807 Query: 290 cccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga--ctggacatc 347 || ||||||||||||||||||||||||| ||||||||||||| ||||| || | | Sbjct: 188808 tccggagctagctggttctccccgaaatgtgttgaggcgcagcggttgatgct-taaact 188866 Query: 348 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 407 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 188867 taggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactc 188926 Query: 408 tgaatacta 416 ||||||||| Sbjct: 188927 tgaatacta 188935 Score = 276 bits (139), Expect = 6e-71 Identities = 320/376 (85%), Gaps = 7/376 (1%) Strand = Plus / Plus Query: 43 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 102 ||||| ||||| ||||||||||||||||||||||| ||| | |||||| |||||||| | Sbjct: 150122 tgacctcgtgcatgttgaagaatgagccggcgacttataagtagtggca-ggttaaggta 150180 Query: 103 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 162 | | | |||| |||| || ||||||||| | ||||| ||| | |||||| |||| Sbjct: 150181 aagaat---accgaagccaaagtgaaagcgagcttgaatagagcgttggtcactatttat 150237 Query: 163 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 222 |||||||||| || ||||||| ||||| ||||| |||||||| | | | |||||| || Sbjct: 150238 agacccgaacccggatgatctagccatggccagggtgaagcttaggtaacactaagtgga 150297 Query: 223 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 282 ||||||| |||||| |||||||| ||| |||||||||||||||| ||||||||||||||| Sbjct: 150298 ggtccgagccgactaatgttgaaaaattagcggatgagttgtggctaggggtgaaatgcc 150357 Query: 283 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga--ct 340 | ||||| || ||||||||||||||||||||||||| ||||||||||||| ||||| || Sbjct: 150358 aatcgaatccggagctagctggttctccccgaaatgtgttgaggcgcagcggttgatgct 150417 Query: 341 ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 400 | | ||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 150418 -taaacttaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagg 150476 Query: 401 caaactctgaatacta 416 |||||||||||||||| Sbjct: 150477 caaactctgaatacta 150492
>emb|BX572100.1| Prochlorococcus marinus MIT9313 complete genome; segment 6/7 Length = 348071 Score = 274 bits (138), Expect = 2e-70 Identities = 195/214 (91%) Strand = Plus / Minus Query: 115 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 174 |||||| |||||||||||||||| ||||||||||| |||| || |||| |||||||||| Sbjct: 5974 ggagccatagcgaaagcgagtctgaatagggcgatcgtcagtgtttatagacccgaaccc 5915 Query: 175 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 234 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 5914 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 5855 Query: 235 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 294 ||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 5854 ctgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 5795 Query: 295 agctagctggttctccccgaaatgcgttgaggcg 328 ||||||||||||||||||||||| |||||||||| Sbjct: 5794 agctagctggttctccccgaaatacgttgaggcg 5761 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 43 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 90 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 6041 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 5994 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 364 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 414 ||||||||||||||||| |||||||||| ||||||| |||||||||||| Sbjct: 5723 tttcggtgcgggctgcgagagcggtacctaatcgagatgaactctgaatac 5673
>emb|BX572095.1| Prochlorococcus marinus MIT9313 complete genome; segment 1/7 Length = 349391 Score = 274 bits (138), Expect = 2e-70 Identities = 195/214 (91%) Strand = Plus / Plus Query: 115 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 174 |||||| |||||||||||||||| ||||||||||| |||| || |||| |||||||||| Sbjct: 211798 ggagccatagcgaaagcgagtctgaatagggcgatcgtcagtgtttatagacccgaaccc 211857 Query: 175 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 234 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 211858 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 211917 Query: 235 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 294 ||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 211918 ctgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 211977 Query: 295 agctagctggttctccccgaaatgcgttgaggcg 328 ||||||||||||||||||||||| |||||||||| Sbjct: 211978 agctagctggttctccccgaaatacgttgaggcg 212011 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 43 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 90 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 211731 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 211778 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 364 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 414 ||||||||||||||||| |||||||||| ||||||| |||||||||||| Sbjct: 212049 tttcggtgcgggctgcgagagcggtacctaatcgagatgaactctgaatac 212099
>gb|DQ312949.1| Uncultured bacterium clone 3M6B 23S ribosomal RNA gene, partial sequence Length = 806 Score = 274 bits (138), Expect = 2e-70 Identities = 195/214 (91%) Strand = Plus / Plus Query: 115 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 174 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 175 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 234 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 235 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 294 ||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 295 agctagctggttctccccgaaatgcgttgaggcg 328 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 43 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 90 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465 Score = 69.9 bits (35), Expect = 7e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 364 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 414 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 736 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 786
>gb|L44126.1|SFFCPRGOL Scherffelia dubia chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 3334 Score = 272 bits (137), Expect = 1e-69 Identities = 231/260 (88%), Gaps = 3/260 (1%) Strand = Plus / Plus Query: 159 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 218 |||| |||||||||||| |||||||| |||||||||||||||||||||| | |||| ||| Sbjct: 687 ttatagacccgaacctgagtgatctaaccatgaccaggatgaagcttgggtaaaaccaag 746 Query: 219 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 278 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 747 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaa 806 Query: 279 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 338 ||||| |||||| ||||||||||||| ||||| ||||||||||||||||||||| |||| Sbjct: 807 tgccaatcgaactcagagctagctggatctcctcgaaatgcgttgaggcgcagcggttgt 866 Query: 339 c--tggacatct-aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 395 | ||| | | | |||||||||||||||||||| ||||||||| | ||||||||||||| Sbjct: 867 cgatgggcttttaaggggtaaagcactgtttcgatgcgggctgtgaaagcggtaccaaat 926 Query: 396 cgaggcaaactctgaatact 415 || ||||||| ||||||| Sbjct: 927 cgttgcaaactaagaatact 946 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 42 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 90 |||||||||| ||||||||||||||| ||||||||| ||||| |||||| Sbjct: 570 ctgaccgcgtacctgttgaagaatgaaccggcgacttataggaagtggc 618 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 451 ccagtgagacgatgggggataagcttcatcgt 482 ||||||||||| |||||||||||||||||||| Sbjct: 965 ccagtgagacggtgggggataagcttcatcgt 996
>gb|AF393609.1| Scherffelia dubia small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and putative site-specific DNA endonuclease (orf167) gene, complete cds; chloroplast genes for chloroplast products Length = 5476 Score = 272 bits (137), Expect = 1e-69 Identities = 231/260 (88%), Gaps = 3/260 (1%) Strand = Plus / Plus Query: 159 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 218 |||| |||||||||||| |||||||| |||||||||||||||||||||| | |||| ||| Sbjct: 2425 ttatagacccgaacctgagtgatctaaccatgaccaggatgaagcttgggtaaaaccaag 2484 Query: 219 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 278 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 2485 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaa 2544 Query: 279 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 338 ||||| |||||| ||||||||||||| ||||| ||||||||||||||||||||| |||| Sbjct: 2545 tgccaatcgaactcagagctagctggatctcctcgaaatgcgttgaggcgcagcggttgt 2604 Query: 339 c--tggacatct-aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 395 | ||| | | | |||||||||||||||||||| ||||||||| | ||||||||||||| Sbjct: 2605 cgatgggcttttaaggggtaaagcactgtttcgatgcgggctgtgaaagcggtaccaaat 2664 Query: 396 cgaggcaaactctgaatact 415 || ||||||| ||||||| Sbjct: 2665 cgttgcaaactaagaatact 2684 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 42 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 90 |||||||||| ||||||||||||||| ||||||||| ||||| |||||| Sbjct: 2308 ctgaccgcgtacctgttgaagaatgaaccggcgacttataggaagtggc 2356 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 451 ccagtgagacgatgggggataagcttcatcgt 482 ||||||||||| |||||||||||||||||||| Sbjct: 2703 ccagtgagacggtgggggataagcttcatcgt 2734
>emb|AM084273.1| Paulinella chromatophora plastid 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain M 0880 Length = 4934 Score = 270 bits (136), Expect = 4e-69 Identities = 251/286 (87%), Gaps = 5/286 (1%) Strand = Plus / Plus Query: 43 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 102 |||||| |||||||||||||||||||||||||||| ||||| | |||| ||||||||| Sbjct: 2776 tgaccgtgtgcctgttgaagaatgagccggcgacttataggtactggca-ggttaaggg- 2833 Query: 103 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 162 |||| | |||||||| ||||||||||||||| ||||||||||| |||| | |||| Sbjct: 2834 --ggaaatc-ccggagccacagcgaaagcgagtctgaatagggcgatggtcagtatttat 2890 Query: 163 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 222 |||||||||| |||||||||| ||||| |||||||||||||||| ||| || | | || Sbjct: 2891 agacccgaacccgggtgatctaaccatggccaggatgaagcttgggtgataccacgtgga 2950 Query: 223 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 282 ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 2951 ggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgcc 3010 Query: 283 actcgaacccagagctagctggttctccccgaaatgcgttgaggcg 328 | |||||||| |||||||||||||||||||||||| |||| ||||| Sbjct: 3011 aatcgaacccggagctagctggttctccccgaaatacgtttaggcg 3056 Score = 91.7 bits (46), Expect = 2e-15 Identities = 62/66 (93%), Gaps = 1/66 (1%) Strand = Plus / Plus Query: 350 ggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 408 |||||||||| ||||||||||| ||||||||| |||||||||||||||||| |||||||| Sbjct: 3079 ggggtaaagccactgtttcggtacgggctgcgagagcggtaccaaatcgagacaaactct 3138 Query: 409 gaatac 414 |||||| Sbjct: 3139 gaatac 3144
>gb|L43539.1|CRECPRRNL Chlamydomonas sp. (SAG 66.72) chloroplast large subunit ribosomal RNA (rrnL) gene Length = 5575 Score = 268 bits (135), Expect = 2e-68 Identities = 274/317 (86%), Gaps = 10/317 (3%) Strand = Plus / Plus Query: 113 ccggagccgtagcgaaagcgagtcttaatagggcgatt-----gtcactgcttatggacc 167 |||||||| ||||||||||||||||||||||||||||| |||||| | |||||||| Sbjct: 762 ccggagccttagcgaaagcgagtcttaatagggcgattaaagagtcacttcctatggacc 821 Query: 168 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 227 |||||| |||||||||| ||||||||||||||||||||| | | || ||| ||||||| Sbjct: 822 cgaacccgggtgatctaatcatgaccaggatgaagcttgggtaacaccaagtggaggtcc 881 Query: 228 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 287 |||||||| ||||||||| |||| |||||||||||||| ||||||| ||||| ||| ||| Sbjct: 882 gaaccgaccgatgttgaaaaatcggcggatgagttgtgattaggggagaaattccaatcg 941 Query: 288 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact---ggac 344 ||| | ||||||||||| ||||||||||||||||||||||||||| | ||||| | Sbjct: 942 aactcggagctagctggatctccccgaaatgcgttgaggcgcagc-ggtgactatgagct 1000 Query: 345 atctaggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 403 |||||| |||||||| ||||||||| ||||||||||| ||||||||||| ||| ||||| Sbjct: 1001 atctagaggtaaagctactgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaa 1060 Query: 404 actctgaatactagata 420 |||| |||||||||||| Sbjct: 1061 actcagaatactagata 1077 Score = 77.8 bits (39), Expect = 3e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 42 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 100 ||||||||||||||||||||||||||||| |||||| ||||| |||||| |||||||| Sbjct: 695 ctgaccgcgtgcctgttgaagaatgagccagcgacttataggaagtggcaaggttaagg 753
>emb|X68923.1|CHCSRRNX1 Chloroplast Chlamydomonas sp. 66.72 rrnL gene, exon 1 Length = 1218 Score = 268 bits (135), Expect = 2e-68 Identities = 274/317 (86%), Gaps = 10/317 (3%) Strand = Plus / Plus Query: 113 ccggagccgtagcgaaagcgagtcttaatagggcgatt-----gtcactgcttatggacc 167 |||||||| ||||||||||||||||||||||||||||| |||||| | |||||||| Sbjct: 762 ccggagccttagcgaaagcgagtcttaatagggcgattaaagagtcacttcctatggacc 821 Query: 168 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 227 |||||| |||||||||| ||||||||||||||||||||| | | || ||| ||||||| Sbjct: 822 cgaacccgggtgatctaatcatgaccaggatgaagcttgggtaacaccaagtggaggtcc 881 Query: 228 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 287 |||||||| ||||||||| |||| |||||||||||||| ||||||| ||||| ||| ||| Sbjct: 882 gaaccgaccgatgttgaaaaatcggcggatgagttgtgattaggggagaaattccaatcg 941 Query: 288 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact---ggac 344 ||| | ||||||||||| ||||||||||||||||||||||||||| | ||||| | Sbjct: 942 aactcggagctagctggatctccccgaaatgcgttgaggcgcagc-ggtgactatgagct 1000 Query: 345 atctaggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 403 |||||| |||||||| ||||||||| ||||||||||| ||||||||||| ||| ||||| Sbjct: 1001 atctagaggtaaagctactgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaa 1060 Query: 404 actctgaatactagata 420 |||| |||||||||||| Sbjct: 1061 actcagaatactagata 1077 Score = 77.8 bits (39), Expect = 3e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 42 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 100 ||||||||||||||||||||||||||||| |||||| ||||| |||||| |||||||| Sbjct: 695 ctgaccgcgtgcctgttgaagaatgagccagcgacttataggaagtggcaaggttaagg 753
>gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosomal RNA gene, partial sequence Length = 2446 Score = 266 bits (134), Expect = 6e-68 Identities = 255/292 (87%), Gaps = 5/292 (1%) Strand = Plus / Plus Query: 126 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 185 |||| ||||||| || |||||||| ||| || |||| |||||||||| ||||||||| Sbjct: 262 gaaaccgagtctgaaaagggcgataatcagtgtttatagacccgaaccctggtgatctaa 321 Query: 186 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 245 ||||| |||||||||||||||| | | || ||| ||||||||||||||||||||||||| Sbjct: 322 ccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgactgatgttgaa 381 Query: 246 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 305 ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 382 aaatcagcggatgagttgtggttaggggtgaaatgccaatcgaaccaggagctagctggt 441 Query: 306 tctccccgaaatgcgttgaggcgcagcagt--tgactggacatctag-gggtaaagcact 362 ||||||||||||| ||| ||||||||| || ||| | | |||| | |||||||||||| Sbjct: 442 tctccccgaaatgtgtttaggcgcagcggtaatgatt--atatctggggggtaaagcact 499 Query: 363 gtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 414 |||||||||||||||| | || ||||||||||||||| |||||||||||||| Sbjct: 500 gtttcggtgcgggctgggagaccggtaccaaatcgagacaaactctgaatac 551 Score = 81.8 bits (41), Expect = 2e-12 Identities = 44/45 (97%) Strand = Plus / Plus Query: 41 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 85 ||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 182 tctgaccgcgtgcctgttgaagaatgagccggcgacttataggca 226 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Plus Query: 450 gccagtgagacgatgggggataagcttcat 479 ||||||||||| ||||||||||||||||| Sbjct: 566 gccagtgagacagtgggggataagcttcat 595
>gb|DQ291132.1| Oltmannsiellopsis viridis chloroplast, complete genome Length = 151933 Score = 266 bits (134), Expect = 6e-68 Identities = 265/308 (86%), Gaps = 3/308 (0%) Strand = Plus / Plus Query: 113 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 172 |||||||| ||||||||| ||||| ||||||||| |||||||| ||||||||||||||| Sbjct: 137118 ccggagcctaagcgaaagcaagtctgaatagggcgtttgtcacttcttatggacccgaac 137177 Query: 173 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 232 | |||||||||| |||||||||||||||||||||| | |||| ||| || | ||||||| Sbjct: 137178 ccgggtgatctaaccatgaccaggatgaagcttgggtaaaaccaagtggaagaccgaacc 137237 Query: 233 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 292 ||| ||||||||| |||| |||||||||||||||||||||| ||||| | | |||||| | Sbjct: 137238 gaccgatgttgaaaaatcggcggatgagttgtggttaggggagaaattctaatcgaactc 137297 Query: 293 agagctagctggttctccccgaaatgcgttgaggcgcagcagtt---gactggacatcta 349 |||||||||||||||| ||||||| ||||||||||||| ||| ||| || |||| Sbjct: 137298 ggagctagctggttctcttcgaaatgtgttgaggcgcagcggttggcgacgggctgtcta 137357 Query: 350 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 409 ||||||||||||||||||||||||||||| | | |||||||||||| |||||||| | Sbjct: 137358 ggggtaaagcactgtttcggtgcgggctgggaaactggtaccaaatcgtagcaaactcag 137417 Query: 410 aatactag 417 |||||||| Sbjct: 137418 aatactag 137425 Score = 266 bits (134), Expect = 6e-68 Identities = 265/308 (86%), Gaps = 3/308 (0%) Strand = Plus / Minus Query: 113 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 172 |||||||| ||||||||| ||||| ||||||||| |||||||| ||||||||||||||| Sbjct: 48426 ccggagcctaagcgaaagcaagtctgaatagggcgtttgtcacttcttatggacccgaac 48367 Query: 173 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 232 | |||||||||| |||||||||||||||||||||| | |||| ||| || | ||||||| Sbjct: 48366 ccgggtgatctaaccatgaccaggatgaagcttgggtaaaaccaagtggaagaccgaacc 48307 Query: 233 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 292 ||| ||||||||| |||| |||||||||||||||||||||| ||||| | | |||||| | Sbjct: 48306 gaccgatgttgaaaaatcggcggatgagttgtggttaggggagaaattctaatcgaactc 48247 Query: 293 agagctagctggttctccccgaaatgcgttgaggcgcagcagtt---gactggacatcta 349 |||||||||||||||| ||||||| ||||||||||||| ||| ||| || |||| Sbjct: 48246 ggagctagctggttctcttcgaaatgtgttgaggcgcagcggttggcgacgggctgtcta 48187 Query: 350 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 409 ||||||||||||||||||||||||||||| | | |||||||||||| |||||||| | Sbjct: 48186 ggggtaaagcactgtttcggtgcgggctgggaaactggtaccaaatcgtagcaaactcag 48127 Query: 410 aatactag 417 |||||||| Sbjct: 48126 aatactag 48119 Score = 83.8 bits (42), Expect = 5e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 43 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 100 ||||||||| ||||||||||||||||| ||||||| ||||| |||||||||||||||| Sbjct: 137053 tgaccgcgttcctgttgaagaatgagctggcgacttatagggagtggcttggttaagg 137110 Score = 83.8 bits (42), Expect = 5e-13 Identities = 54/58 (93%) Strand = Plus / Minus Query: 43 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 100 ||||||||| ||||||||||||||||| ||||||| ||||| |||||||||||||||| Sbjct: 48491 tgaccgcgttcctgttgaagaatgagctggcgacttatagggagtggcttggttaagg 48434 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 451 ccagtgagacgatgggggataagcttcatcgt 482 ||||||||||| |||||||||||||||||||| Sbjct: 137442 ccagtgagacggtgggggataagcttcatcgt 137473 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 451 ccagtgagacgatgggggataagcttcatcgt 482 ||||||||||| |||||||||||||||||||| Sbjct: 48102 ccagtgagacggtgggggataagcttcatcgt 48071
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 266 bits (134), Expect = 6e-68 Identities = 267/310 (86%), Gaps = 6/310 (1%) Strand = Plus / Plus Query: 112 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 171 ||||||||| ||||||||||||||| ||||||||| ||||||| ||| |||||||| Sbjct: 624 accggagccagagcgaaagcgagtctgaatagggcgcatgtcacttgttaaagacccgaa 683 Query: 172 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 231 || |||||||||| ||||| |||||| ||||||||| |||||| | || |||||||| Sbjct: 684 cccgggtgatctaaccatggccaggaggaagcttgggtgaaaccttgtggaagtccgaac 743 Query: 232 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 291 |||| || |||||||| || |||||||||||||||||||||||||||| ||| |||||| Sbjct: 744 cgaccgacgttgaagagtcggcggatgagttgtggttaggggtgaaataccagtcgaact 803 Query: 292 cagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-----ctggaca- 345 | ||||||||||||||||||||||||||||||||||||||| || || ||| || Sbjct: 804 cggagctagctggttctccccgaaatgcgttgaggcgcagcggtcgattaagatgggcag 863 Query: 346 tctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 405 ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| Sbjct: 864 tctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaac 923 Query: 406 tctgaatact 415 | ||||||| Sbjct: 924 taagaatact 933 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 42 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 100 |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 559 ctgaccgcgtgcctgttgaagaatgagccggcgacttttagcaagtggcttggttaagg 617 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 447 tcggccagtgagacgatgggggataagcttcat 479 |||||||||||||| ||||||||||||||||| Sbjct: 948 tcggccagtgagacagtgggggataagcttcat 980
>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome Length = 1751080 Score = 266 bits (134), Expect = 6e-68 Identities = 194/214 (90%) Strand = Plus / Plus Query: 115 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 174 |||||| |||||||||||||||||||||||||| |||||| || |||| |||||||||| Sbjct: 356101 ggagccatagcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccc 356160 Query: 175 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 234 ||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 356161 tggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 356220 Query: 235 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 294 ||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||| | Sbjct: 356221 ctgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaaccagg 356280 Query: 295 agctagctggttctccccgaaatgcgttgaggcg 328 ||||||||||||||||||||||| |||||||||| Sbjct: 356281 agctagctggttctccccgaaatacgttgaggcg 356314 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 43 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 90 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 356034 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 356081 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 364 tttcggtgcgggctgcgcgagcggtaccaaatcga 398 ||||||||||||||||| |||||||||||||||| Sbjct: 356352 tttcggtgcgggctgcgaaagcggtaccaaatcga 356386
>emb|Z18289.1|PPC16SRNA Palmaria palmata Chloroplast for 16SrRNA gene Length = 4870 Score = 262 bits (132), Expect = 1e-66 Identities = 323/379 (85%), Gaps = 7/379 (1%) Strand = Plus / Plus Query: 41 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 100 ||||||| ||||| ||||||||||||||||||||||| || |||||||| |||||||| Sbjct: 2321 tctgacctcgtgcatgttgaagaatgagccggcgacttgtatgcagtggca-ggttaagg 2379 Query: 101 -gaacggaacccaccggagccgtagcgaaagcgagtcttaatagg-gcgattgtcactgc 158 | | ||| ||||||||| ||| ||||||||| ||| ||| | ||| | ||||||| Sbjct: 2380 cgtaaagaat--accggagccatagtgaaagcgag-cttgataagagcgttcgtcactgt 2436 Query: 159 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 218 ||| |||||||||| || ||||||| |||| ||||| |||||||| | | | |||||| Sbjct: 2437 ttacagacccgaacccggatgatctagtcatggccagggtgaagcttaggtaacactaag 2496 Query: 219 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 278 ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| Sbjct: 2497 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtgattaggggtgaaa 2556 Query: 279 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 338 ||||| ||||| || ||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 2557 tgccaatcgaatccggagctagctggttctccccgaaatgcgttttggcgcagcggttga 2616 Query: 339 ctggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 397 | | | ||||||||||||||||||||||| ||||||| | ||||||||||||||| Sbjct: 2617 tgctatagcttaggggtaaagcactgtttcggtacgggctgtgaaagcggtaccaaatcg 2676 Query: 398 aggcaaactctgaatacta 416 ||||||||||||||||||| Sbjct: 2677 aggcaaactctgaatacta 2695 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 451 ccagtgagacgatgggggataagcttcat 479 |||||||||| ||||||||||||||||| Sbjct: 2709 ccagtgagacagtgggggataagcttcat 2737
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 258 bits (130), Expect = 1e-65 Identities = 193/214 (90%) Strand = Plus / Minus Query: 115 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 174 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 2138158 ggagccatagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaaccc 2138099 Query: 175 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 234 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 2138098 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 2138039 Query: 235 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 294 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 2138038 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 2137979 Query: 295 agctagctggttctccccgaaatgcgttgaggcg 328 ||||||||||||||||||||||| |||||||||| Sbjct: 2137978 agctagctggttctccccgaaatacgttgaggcg 2137945 Score = 258 bits (130), Expect = 1e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 115 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 174 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 476702 ggagccatagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaaccc 476761 Query: 175 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 234 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 476762 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 476821 Query: 235 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 294 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 476822 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 476881 Query: 295 agctagctggttctccccgaaatgcgttgaggcg 328 ||||||||||||||||||||||| |||||||||| Sbjct: 476882 agctagctggttctccccgaaatacgttgaggcg 476915 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 43 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 90 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2138225 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 2138178 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 43 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 90 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 476635 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 476682 Score = 69.9 bits (35), Expect = 7e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 364 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 414 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 2137907 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 2137857 Score = 69.9 bits (35), Expect = 7e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 364 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 414 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 476953 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 477003
>gb|AY584509.1| Anabaena cylindrica strain UTEX 629 23S ribosomal RNA gene, partial sequence Length = 2389 Score = 258 bits (130), Expect = 1e-65 Identities = 254/292 (86%), Gaps = 5/292 (1%) Strand = Plus / Plus Query: 126 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 185 |||| ||||||| || |||||||| ||| || |||| |||||||||| ||||||||| Sbjct: 262 gaaaccgagtctgaagagggcgataatcagtgtttatagacccgaaccctggtgatctaa 321 Query: 186 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 245 ||||| |||||||||||||||| | | || ||| ||||||||||||||||||||||||| Sbjct: 322 ccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgactgatgttgaa 381 Query: 246 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 305 |||||||||||||| |||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 382 aaatcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagctggt 441 Query: 306 tctccccgaaatgcgttgaggcgcagcagt--tgactggacatctag-gggtaaagcact 362 ||||||||||||| ||| ||||||||| || ||| | | |||| | |||||||||||| Sbjct: 442 tctccccgaaatgtgtttaggcgcagcggtaatgatt--atatctggggggtaaagcact 499 Query: 363 gtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 414 |||||||||||||||| | || ||||||||||||||| |||||||||||||| Sbjct: 500 gtttcggtgcgggctgggagaccggtaccaaatcgagacaaactctgaatac 551 Score = 77.8 bits (39), Expect = 3e-11 Identities = 42/43 (97%) Strand = Plus / Plus Query: 43 tgaccgcgtgcctgttgaagaatgagccggcgactcataggca 85 ||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 184 tgaccgcgtgcctgttgaagaatgagccggcgacttataggca 226 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Plus Query: 450 gccagtgagacgatgggggataagcttcat 479 ||||||||||| ||||||||||||||||| Sbjct: 566 gccagtgagacagtgggggataagcttcat 595
>gb|DQ174248.1| Phaeodactylum tricornutum 16S ribosomal RNA, tRNA-Ile, tRNA-Ala, 23S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast Length = 5026 Score = 258 bits (130), Expect = 1e-65 Identities = 253/292 (86%), Gaps = 4/292 (1%) Strand = Plus / Plus Query: 41 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 100 |||||| |||||||||||||||||||||||||||||| ||| | |||||| |||||||| Sbjct: 2303 tctgactgcgtgcctgttgaagaatgagccggcgacttataagtagtggca-ggttaagg 2361 Query: 101 gaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctt 160 | | | ||||||||| ||| ||||||||| || ||||||||| ||||||||| || Sbjct: 2362 tagagaat---accggagccatagtgaaagcgagcctgaatagggcgtttgtcactggtt 2418 Query: 161 atggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagca 220 || |||||||||| || ||||||| ||||| ||||| |||||||| | | | |||||| Sbjct: 2419 atagacccgaacccggatgatctaaccatggccaggttgaagcttaggtaatactaagtg 2478 Query: 221 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 280 |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 2479 gaggaccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatg 2538 Query: 281 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 332 ||| ||||| | ||||||||||||||||||||||||||||| ||||||||| Sbjct: 2539 ccaatcgaattcggagctagctggttctccccgaaatgcgtttaggcgcagc 2590
>emb|BX569694.1| Synechococcus sp. WH8102 complete genome; segment 6/7 Length = 349122 Score = 258 bits (130), Expect = 1e-65 Identities = 193/214 (90%) Strand = Plus / Minus Query: 115 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 174 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 339409 ggagccatagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaaccc 339350 Query: 175 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 234 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 339349 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 339290 Query: 235 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 294 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 339289 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 339230 Query: 295 agctagctggttctccccgaaatgcgttgaggcg 328 ||||||||||||||||||||||| |||||||||| Sbjct: 339229 agctagctggttctccccgaaatacgttgaggcg 339196 Score = 258 bits (130), Expect = 1e-65 Identities = 193/214 (90%) Strand = Plus / Minus Query: 115 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 174 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 132469 ggagccatagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaaccc 132410 Query: 175 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 234 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 132409 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 132350 Query: 235 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 294 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 132349 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 132290 Query: 295 agctagctggttctccccgaaatgcgttgaggcg 328 ||||||||||||||||||||||| |||||||||| Sbjct: 132289 agctagctggttctccccgaaatacgttgaggcg 132256 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 43 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 90 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 339476 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 339429 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 43 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 90 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 132536 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 132489 Score = 69.9 bits (35), Expect = 7e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 364 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 414 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 339158 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 339108 Score = 69.9 bits (35), Expect = 7e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 364 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 414 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 132218 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 132168
>gb|DQ312972.1| Uncultured bacterium clone 3N4D 23S ribosomal RNA gene, partial sequence Length = 723 Score = 258 bits (130), Expect = 1e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 115 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 174 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 175 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 234 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 235 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 294 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 295 agctagctggttctccccgaaatgcgttgaggcg 328 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 43 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 90 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312883.1| Uncultured bacterium clone 3K4C 23S ribosomal RNA gene, partial sequence Length = 723 Score = 258 bits (130), Expect = 1e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 115 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 174 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 175 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 234 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 235 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 294 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 295 agctagctggttctccccgaaatgcgttgaggcg 328 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 43 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 90 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312666.1| Uncultured bacterium clone 3D4G 23S ribosomal RNA gene, partial sequence Length = 806 Score = 258 bits (130), Expect = 1e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 115 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 174 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 175 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 234 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 235 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 294 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 295 agctagctggttctccccgaaatgcgttgaggcg 328 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 43 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 90 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465 Score = 69.9 bits (35), Expect = 7e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 364 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 414 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 736 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 786
>gb|DQ312593.1| Uncultured bacterium clone 3B8B 23S ribosomal RNA gene, partial sequence Length = 723 Score = 258 bits (130), Expect = 1e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 115 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 174 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 175 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 234 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 235 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 294 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 295 agctagctggttctccccgaaatgcgttgaggcg 328 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 43 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 90 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312550.1| Uncultured bacterium clone 3B11D 23S ribosomal RNA gene, partial sequence Length = 806 Score = 258 bits (130), Expect = 1e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 115 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 174 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 175 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 234 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 235 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 294 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 295 agctagctggttctccccgaaatgcgttgaggcg 328 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 43 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 90 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465 Score = 69.9 bits (35), Expect = 7e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 364 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 414 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 736 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 786
>emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL gene Length = 2904 Score = 258 bits (130), Expect = 1e-65 Identities = 271/312 (86%), Gaps = 7/312 (2%) Strand = Plus / Plus Query: 117 agccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccgaacct 174 |||| |||||||||||||||| ||||||||| | |||||| |||||||||||||||| Sbjct: 656 agccatagcgaaagcgagtctgaatagggcgtcttcgtcacttcttatggacccgaaccc 715 Query: 175 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 234 |||||||||| |||||||||||||||||||||| | || | ||| |||||||||||||| Sbjct: 716 gggtgatctaaccatgaccaggatgaagcttgggtaaatccaagtggaggtccgaaccga 775 Query: 235 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 294 | ||||||||| |||| |||||||||||||||||||||| ||||| ||| |||||| | | Sbjct: 776 ccgatgttgaaaaatcggcggatgagttgtggttaggggagaaattccaatcgaactcgg 835 Query: 295 agctagctggttctccccgaaatgcgttgaggcgcagcagt--tgactggac-atctagg 351 |||||||||| ||||||||||||||||||||||||||| || || || || |||| || Sbjct: 836 agctagctggatctccccgaaatgcgttgaggcgcagcggtaacga-tgaactatcttgg 894 Query: 352 ggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctga 410 |||||||| ||||||||| ||||||||||| || |||||||| ||| ||||||||| || Sbjct: 895 ggtaaagctactgtttcgatgcgggctgcgaaagtggtaccaagtcgtggcaaactcaga 954 Query: 411 atactagatatg 422 |||| ||||||| Sbjct: 955 atacaagatatg 966 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 43 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 101 |||| |||||||||||||||||||||||||||||| ||||| ||||||| ||||||||| Sbjct: 586 tgactgcgtgcctgttgaagaatgagccggcgacttataggaagtggctaggttaaggg 644 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 451 ccagtgagacgatgggggataagcttcat 479 |||||||||| ||||||||||||||||| Sbjct: 978 ccagtgagacagtgggggataagcttcat 1006
>gb|AF041468.1| Guillardia theta complete plastid genome Length = 121524 Score = 254 bits (128), Expect = 2e-64 Identities = 310/366 (84%), Gaps = 6/366 (1%) Strand = Plus / Minus Query: 53 cctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccca 112 ||||||||||||||||||||||||| |||| |||||| |||||||| | ||| | Sbjct: 39855 cctgttgaagaatgagccggcgacttgtaggtagtggca-ggttaaggta---gaaaata 39800 Query: 113 ccggagccgtagcgaaagcgagtcttaatagggcgatt-gtcactgcttatggacccgaa 171 |||||||| || ||||||||| ||||||| ||| || ||||||| ||| |||||||| Sbjct: 39799 ccggagccagagtgaaagcgagctttaatagagcgttttgtcactgtttacagacccgaa 39740 Query: 172 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 231 || || ||||||| ||||| |||| |||||||| | | | |||||| ||||| ||||| Sbjct: 39739 cccggatgatctaaccatggccagcgtgaagcttaggtaacactaagtggaggtgcgaac 39680 Query: 232 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 291 |||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||| | Sbjct: 39679 cgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaatc 39620 Query: 292 cagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc-tag 350 | ||||||||||||||||||||||||||||| ||||||||| |||| || | ||| Sbjct: 39619 cggagctagctggttctccccgaaatgcgtttaggcgcagcgattgatgctccaacttag 39560 Query: 351 gggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctga 410 ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 39559 gggtaaagcactgtttcggtgcgggctgctaacgcggtaccaaatcgatgcaaactctga 39500 Query: 411 atacta 416 |||||| Sbjct: 39499 atacta 39494 Score = 254 bits (128), Expect = 2e-64 Identities = 310/366 (84%), Gaps = 6/366 (1%) Strand = Plus / Plus Query: 53 cctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccca 112 ||||||||||||||||||||||||| |||| |||||| |||||||| | ||| | Sbjct: 19545 cctgttgaagaatgagccggcgacttgtaggtagtggca-ggttaaggta---gaaaata 19600 Query: 113 ccggagccgtagcgaaagcgagtcttaatagggcgatt-gtcactgcttatggacccgaa 171 |||||||| || ||||||||| ||||||| ||| || ||||||| ||| |||||||| Sbjct: 19601 ccggagccagagtgaaagcgagctttaatagagcgttttgtcactgtttacagacccgaa 19660 Query: 172 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 231 || || ||||||| ||||| |||| |||||||| | | | |||||| ||||| ||||| Sbjct: 19661 cccggatgatctaaccatggccagcgtgaagcttaggtaacactaagtggaggtgcgaac 19720 Query: 232 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 291 |||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||| | Sbjct: 19721 cgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaatc 19780 Query: 292 cagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc-tag 350 | ||||||||||||||||||||||||||||| ||||||||| |||| || | ||| Sbjct: 19781 cggagctagctggttctccccgaaatgcgtttaggcgcagcgattgatgctccaacttag 19840 Query: 351 gggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctga 410 ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 19841 gggtaaagcactgtttcggtgcgggctgctaacgcggtaccaaatcgatgcaaactctga 19900 Query: 411 atacta 416 |||||| Sbjct: 19901 atacta 19906
>gb|L43355.1|CRECPRRNLF Chlamydomonas pseudopertusa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3397 Score = 252 bits (127), Expect = 9e-64 Identities = 272/317 (85%), Gaps = 10/317 (3%) Strand = Plus / Plus Query: 113 ccggagccgtagcgaaagcgagtcttaatagggcgatt-----gtcactgcttatggacc 167 |||||||| ||||||||||||||||||||||||||| | |||||| |||||||| Sbjct: 816 ccggagccttagcgaaagcgagtcttaatagggcgaataaagagtcactttctatggacc 875 Query: 168 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 227 |||||| |||||||||| ||||||||||||||||||||| | | || ||| ||||||| Sbjct: 876 cgaacccgggtgatctaatcatgaccaggatgaagcttgggtaacaccaagtggaggtcc 935 Query: 228 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 287 |||||||| ||||||||| |||| |||||||||||||| ||||||| ||||| ||| ||| Sbjct: 936 gaaccgaccgatgttgaaaaatcggcggatgagttgtgattaggggagaaattccaatcg 995 Query: 288 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact---ggac 344 ||| | ||||||||||| ||||||||||||||||||||||||||| | ||||| | Sbjct: 996 aactcggagctagctggatctccccgaaatgcgttgaggcgcagc-ggtgactatgagct 1054 Query: 345 atctaggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 403 |||||| |||||||| ||||||||| ||||||||||| ||||||||||| ||| ||||| Sbjct: 1055 atctagaggtaaagctactgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaa 1114 Query: 404 actctgaatactagata 420 |||| |||||||||||| Sbjct: 1115 actcagaatactagata 1131 Score = 83.8 bits (42), Expect = 5e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 43 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 100 ||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 750 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcaaggttaagg 807
>gb|AY584525.1| Plectonema terebrans strain CCAP 1463-4 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 250 bits (126), Expect = 4e-63 Identities = 310/368 (84%), Gaps = 5/368 (1%) Strand = Plus / Plus Query: 48 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 107 |||||||||||||||||||||||||||||| ||||||| |||| ||||||||| | | Sbjct: 188 gcgtgcctgttgaagaatgagccggcgacttataggcactggca-ggttaaggggaataa 246 Query: 108 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 167 |||| | |||| || |||| ||||||| ||||||||| | |||| || |||| |||| Sbjct: 247 accc---gaagccaaagggaaaccgagtctgaatagggcgttagtcagtgtttatagacc 303 Query: 168 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 227 |||||| |||||||||| ||||| |||||||||||||||| ||| || ||| ||||||| Sbjct: 304 cgaacccgggtgatctaaccatgtccaggatgaagcttgggtgacaccaagtggaggtcc 363 Query: 228 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 287 |||||||| |||||| | ||||||||| |||||||||||||||||||||| ||| Sbjct: 364 gaaccgaccaccgttgaaaaggtggcggatgaggtgtggttaggggtgaaatgccaatcg 423 Query: 288 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 347 ||||| ||||||||||||||||| ||||||| |||||||| |||| |||| ||| | Sbjct: 424 aacccggagctagctggttctcctcgaaatgtgttgaggcacagcggttgtgattacagc 483 Query: 348 t-aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 406 | |||||||||||||| |||||||||||||||| |||||||||||||||||| |||||| Sbjct: 484 tggggggtaaagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaact 543 Query: 407 ctgaatac 414 | |||||| Sbjct: 544 cagaatac 551 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 450 gccagtgagacgatgggggataagcttcatcgt 482 |||||| ||||| |||||||||||||||||||| Sbjct: 566 gccagtcagacggtgggggataagcttcatcgt 598
>gb|AY584522.1| Lyngbya aestuarii PCC 7419 23S ribosomal RNA gene, partial sequence Length = 2435 Score = 250 bits (126), Expect = 4e-63 Identities = 189/210 (90%) Strand = Plus / Plus Query: 123 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 182 ||||||||||||||| |||||||||| |||| || || | |||||||||| |||||||| Sbjct: 260 agcgaaagcgagtctgaatagggcgaaagtcattgtttgtagacccgaacccgggtgatc 319 Query: 183 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 242 || ||||| |||||||||||||||| | |||| ||| ||||||||||||||| |||||| Sbjct: 320 taaccatgtccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgaccgatgtt 379 Query: 243 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 302 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 380 gaaaaatcggcggatgaggtgtggttaggggtgaaatgccaatcgaacccggagctagct 439 Query: 303 ggttctccccgaaatgcgttgaggcgcagc 332 |||||||||||||||||||||||||||||| Sbjct: 440 ggttctccccgaaatgcgttgaggcgcagc 469 Score = 113 bits (57), Expect = 5e-22 Identities = 63/65 (96%) Strand = Plus / Plus Query: 350 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 409 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 488 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactctg 547 Query: 410 aatac 414 ||||| Sbjct: 548 aatac 552 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 41 tctgaccgcgtgcctgttgaagaatgagccggcga 75 |||||||||||||||||||||| |||||||||||| Sbjct: 182 tctgaccgcgtgcctgttgaagcatgagccggcga 216 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 451 ccagtgagacgatgggggataagcttcatcgt 482 ||||||||||| |||||||||||||||||||| Sbjct: 568 ccagtgagacggtgggggataagcttcatcgt 599
>gb|AY584518.1| Oscillatoria sp. strain PCC 6506 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 250 bits (126), Expect = 4e-63 Identities = 189/210 (90%) Strand = Plus / Plus Query: 123 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 182 ||||||||||||||| || |||||| | ||||||| |||| |||||||||| |||||||| Sbjct: 260 agcgaaagcgagtctgaaaagggcgttcgtcactgtttatagacccgaacccgggtgatc 319 Query: 183 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 242 || ||||| |||||||||||||||| | | || ||| |||||||||||||||||||||| Sbjct: 320 taaccatgtccaggatgaagcttgggtaacaccaagtggaggtccgaaccgactgatgtt 379 Query: 243 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 302 ||| |||||||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 380 gaaaaatcagcggatgaggtgtggttaggggtgaaatgccaatcgaacccggagctagct 439 Query: 303 ggttctccccgaaatgcgttgaggcgcagc 332 |||||||||||||||| |||||||| |||| Sbjct: 440 ggttctccccgaaatgtgttgaggcacagc 469 Score = 113 bits (57), Expect = 5e-22 Identities = 63/65 (96%) Strand = Plus / Plus Query: 350 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 409 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 488 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactctg 547 Query: 410 aatac 414 ||||| Sbjct: 548 aatac 552 Score = 63.9 bits (32), Expect = 4e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 43 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 90 |||||| ||||||||||||| |||||||||||| | |||||||||||| Sbjct: 184 tgaccgtgtgcctgttgaagcatgagccggcgagttataggcagtggc 231 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 450 gccagtgagacgatgggggataagcttcatcgt 482 |||||| ||||| ||||||||||||| |||||| Sbjct: 567 gccagtcagacggtgggggataagctccatcgt 599
>gb|L43502.1|CRECPRRNLK Chlamydomonas komma chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CkoI genes Length = 5105 Score = 250 bits (126), Expect = 4e-63 Identities = 271/314 (86%), Gaps = 4/314 (1%) Strand = Plus / Plus Query: 113 ccggagccgtagcgaaagcgagtcttaatagggcg-attgtcactgcttatggacccgaa 171 |||||||| ||||||||| ||||| ||||||||| ||||||||| |||||||||||||| Sbjct: 648 ccggagcccaagcgaaagcaagtctgaatagggcgtattgtcacttcttatggacccgaa 707 Query: 172 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 231 || ||||||||||| |||| |||||||||||||||| | | || ||| ||||||||||| Sbjct: 708 cccgggtgatctattcatggccaggatgaagcttgggtaacaccaagtggaggtccgaac 767 Query: 232 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 291 |||| ||||||||| |||| ||||||||| |||| |||||| ||||| ||| |||||| Sbjct: 768 cgaccgatgttgaaaaatcggcggatgagctgtgaataggggagaaattccaatcgaact 827 Query: 292 cagagctagctggttctccccgaaatgcgttgaggcgcagcagt-tgactggac-atcta 349 | ||||||||||| ||||||||||||||||||||||||||| || | ||| | |||| Sbjct: 828 cggagctagctggatctccccgaaatgcgttgaggcgcagcggtaacaatgggctatctt 887 Query: 350 ggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 408 |||||||||| ||||||||| ||||||||||| ||| |||||||| ||| ||||||||| Sbjct: 888 ggggtaaagcgactgtttcgatgcgggctgcgagagtggtaccaagtcgtggcaaactca 947 Query: 409 gaatactagatatg 422 |||||| ||||||| Sbjct: 948 gaatacaagatatg 961 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 43 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 91 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 629 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 451 ccagtgagacgatgggggataagcttcatcgt 482 ||||||||||| |||||||||||||||||||| Sbjct: 973 ccagtgagacggtgggggataagcttcatcgt 1004
>gb|DQ313038.1| Uncultured bacterium clone 3P8C 23S ribosomal RNA gene, partial sequence Length = 793 Score = 250 bits (126), Expect = 4e-63 Identities = 192/214 (89%) Strand = Plus / Plus Query: 115 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 174 |||||| |||||||||||||||| ||||||||| |||||| | |||| |||||||||| Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaaccc 531 Query: 175 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 234 |||||||||| ||||| |||||||||||||||| ||| || ||| ||||||||||| || Sbjct: 532 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaacgga 591 Query: 235 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 294 ||||||||||| ||||||| |||||| |||||||||||||||||||||| |||||||| | Sbjct: 592 ctgatgttgaaaaatcagccgatgagctgtggttaggggtgaaatgccaatcgaacccgg 651 Query: 295 agctagctggttctccccgaaatgcgttgaggcg 328 ||||||||||||||||||||||| |||||||||| Sbjct: 652 agctagctggttctccccgaaatacgttgaggcg 685 Score = 69.9 bits (35), Expect = 7e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 364 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 414 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 723 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 773 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 43 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 83 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>gb|DQ313003.1| Uncultured bacterium clone 3O5G 23S ribosomal RNA gene, partial sequence Length = 793 Score = 250 bits (126), Expect = 4e-63 Identities = 192/214 (89%) Strand = Plus / Plus Query: 115 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 174 |||||| |||||||||||||||| ||||||||| |||||| | |||| |||||||||| Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaaccc 531 Query: 175 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 234 |||||||||| ||||| |||||||||||||||| ||| || ||| ||||||||||| || Sbjct: 532 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaacgga 591 Query: 235 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 294 ||||||||||| ||||||| |||||| |||||||||||||||||||||| |||||||| | Sbjct: 592 ctgatgttgaaaaatcagccgatgagctgtggttaggggtgaaatgccaatcgaacccgg 651 Query: 295 agctagctggttctccccgaaatgcgttgaggcg 328 ||||||||||||||||||||||| |||||||||| Sbjct: 652 agctagctggttctccccgaaatacgttgaggcg 685 Score = 69.9 bits (35), Expect = 7e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 364 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 414 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 723 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 773 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 43 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 83 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>gb|DQ312801.1| Uncultured bacterium clone 3H5F 23S ribosomal RNA gene, partial sequence Length = 793 Score = 250 bits (126), Expect = 4e-63 Identities = 192/214 (89%) Strand = Plus / Plus Query: 115 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 174 |||||| |||||||||||||||| ||||||||| |||||| | |||| |||||||||| Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaaccc 531 Query: 175 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 234 |||||||||| ||||| |||||||||||||||| ||| || ||| ||||||||||| || Sbjct: 532 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaacgga 591 Query: 235 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 294 ||||||||||| ||||||| |||||| |||||||||||||||||||||| |||||||| | Sbjct: 592 ctgatgttgaaaaatcagccgatgagctgtggttaggggtgaaatgccaatcgaacccgg 651 Query: 295 agctagctggttctccccgaaatgcgttgaggcg 328 ||||||||||||||||||||||| |||||||||| Sbjct: 652 agctagctggttctccccgaaatacgttgaggcg 685 Score = 69.9 bits (35), Expect = 7e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 364 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 414 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 723 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 773 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 43 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 83 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 250 bits (126), Expect = 4e-63 Identities = 182/200 (91%), Gaps = 3/200 (1%) Strand = Plus / Plus Query: 221 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 280 |||| |||||||||| ||||||||| |||| ||||||||||||||||||||||||||||| Sbjct: 736 gaggcccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatg 795 Query: 281 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 340 ||| |||||| | ||||||||||||||||||||||||||||||||||||||| || | | Sbjct: 796 ccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtgggtt 855 Query: 341 ---ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 397 || |||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 856 tagggctatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcg 915 Query: 398 aggcaaactctgaatactag 417 || ||||||||||||||||| Sbjct: 916 agacaaactctgaatactag 935 Score = 105 bits (53), Expect = 1e-19 Identities = 56/57 (98%) Strand = Plus / Plus Query: 44 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 100 |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 562 gaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggttaagg 618 Score = 63.9 bits (32), Expect = 4e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 150 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagctt 205 |||||||| ||||||||||||| | | |||||||| ||||||||||| |||||||| Sbjct: 664 tgtcactgtttatggacccgaatccgagtgatctaaccatgaccagggtgaagctt 719 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 451 ccagtgagacgatgggggataagcttcat 479 ||||||||||| || |||||||||||||| Sbjct: 953 ccagtgagacggtgagggataagcttcat 981
>emb|X68927.1|CHCKRRNL1 Chloroplast Chlamydomonas komma rrnL gene, exon 1 Length = 1285 Score = 250 bits (126), Expect = 4e-63 Identities = 271/314 (86%), Gaps = 4/314 (1%) Strand = Plus / Plus Query: 113 ccggagccgtagcgaaagcgagtcttaatagggcg-attgtcactgcttatggacccgaa 171 |||||||| ||||||||| ||||| ||||||||| ||||||||| |||||||||||||| Sbjct: 648 ccggagcccaagcgaaagcaagtctgaatagggcgtattgtcacttcttatggacccgaa 707 Query: 172 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 231 || ||||||||||| |||| |||||||||||||||| | | || ||| ||||||||||| Sbjct: 708 cccgggtgatctattcatggccaggatgaagcttgggtaacaccaagtggaggtccgaac 767 Query: 232 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 291 |||| ||||||||| |||| ||||||||| |||| |||||| ||||| ||| |||||| Sbjct: 768 cgaccgatgttgaaaaatcggcggatgagctgtgaataggggagaaattccaatcgaact 827 Query: 292 cagagctagctggttctccccgaaatgcgttgaggcgcagcagt-tgactggac-atcta 349 | ||||||||||| ||||||||||||||||||||||||||| || | ||| | |||| Sbjct: 828 cggagctagctggatctccccgaaatgcgttgaggcgcagcggtaacaatgggctatctt 887 Query: 350 ggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 408 |||||||||| ||||||||| ||||||||||| ||| |||||||| ||| ||||||||| Sbjct: 888 ggggtaaagcgactgtttcgatgcgggctgcgagagtggtaccaagtcgtggcaaactca 947 Query: 409 gaatactagatatg 422 |||||| ||||||| Sbjct: 948 gaatacaagatatg 961 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 43 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 91 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 629 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 451 ccagtgagacgatgggggataagcttcatcgt 482 ||||||||||| |||||||||||||||||||| Sbjct: 973 ccagtgagacggtgggggataagcttcatcgt 1004
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 248 bits (125), Expect = 1e-62 Identities = 197/221 (89%) Strand = Plus / Plus Query: 112 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 171 ||||||||| ||||||||| ||||| ||||||||| |||| ||||||||||||||||| Sbjct: 622 accggagccagagcgaaagcaagtctgaatagggcgtatgtccctgcttatggacccgaa 681 Query: 172 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 231 || |||||||||| |||||||||||||||||||| | ||| ||| ||||||||||| Sbjct: 682 cccgggtgatctaaccatgaccaggatgaagcttcagtaaaatgaagtggaggtccgaac 741 Query: 232 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 291 |||| ||||||||| |||| || ||||||||||||||||||||||||||||| |||||| Sbjct: 742 cgaccgatgttgaaaaatcggctgatgagttgtggttaggggtgaaatgccaatcgaact 801 Query: 292 cagagctagctggttctccccgaaatgcgttgaggcgcagc 332 | ||||||||||||||||||||||||||||||||||||||| Sbjct: 802 cggagctagctggttctccccgaaatgcgttgaggcgcagc 842 Score = 111 bits (56), Expect = 2e-21 Identities = 59/60 (98%) Strand = Plus / Plus Query: 41 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 100 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 556 tctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggttaagg 615 Score = 103 bits (52), Expect = 5e-19 Identities = 70/76 (92%) Strand = Plus / Plus Query: 345 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 404 |||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||| Sbjct: 859 atctaggggtaaagcactgtatcggtgcgggctgcgaaagcggtaccaaatcgtaacaaa 918 Query: 405 ctctgaatactagata 420 |||||||||||||||| Sbjct: 919 ctctgaatactagata 934 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 450 gccagtgagacgatgggggataagcttcatcgt 482 |||||||||||| |||||||||||||||||||| Sbjct: 944 gccagtgagacggtgggggataagcttcatcgt 976
>gb|L43501.1|CRECPRRNLJ Chlamydomonas callosa chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CcaI genes Length = 5999 Score = 246 bits (124), Expect = 6e-62 Identities = 273/317 (86%), Gaps = 8/317 (2%) Strand = Plus / Plus Query: 113 ccggagccgtagcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccg 169 |||||||| ||||||||||||||| ||||||||| || |||||| |||||||||||| Sbjct: 644 ccggagcccaagcgaaagcgagtctgaatagggcgcaaatggtcacttcttatggacccg 703 Query: 170 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccga 229 |||| ||||||||||| ||||||||||||||||||||| | | || ||| ||||||||| Sbjct: 704 aacccgggtgatctattcatgaccaggatgaagcttgggtaacaccaagtggaggtccga 763 Query: 230 accgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaa 289 |||||| ||||||||| |||| |||||||||||||| |||||| ||||| ||| ||||| Sbjct: 764 accgaccgatgttgaaaaatcggcggatgagttgtgaataggggagaaattccaatcgaa 823 Query: 290 cccagagctagctggttctccccgaaatgcgttgaggcgcagcagt--tgactggac-at 346 | | ||||||||||| ||||||||||||||||||||||||||| || || || || || Sbjct: 824 ctcggagctagctggatctccccgaaatgcgttgaggcgcagcggtaacga-tgaactat 882 Query: 347 ctaggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 405 || |||||||||| ||||||||| ||||||||||| || |||||||| ||| ||||||| Sbjct: 883 cttggggtaaagctactgtttcgatgcgggctgcgaaagtggtaccaagtcgtggcaaac 942 Query: 406 tctgaatactagatatg 422 || |||||| ||||||| Sbjct: 943 tcagaatacaagatatg 959 Score = 83.8 bits (42), Expect = 5e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 43 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 100 ||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 578 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggccgggttaagg 635
>emb|Z15152.1|CHCPRRNL Chloroplast Chlamydomonas pitschmannii rrnL gene Length = 3017 Score = 246 bits (124), Expect = 6e-62 Identities = 269/314 (85%), Gaps = 5/314 (1%) Strand = Plus / Plus Query: 113 ccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 170 |||||||| |||||||||| ||||||||||||||||| |||||| ||||||||||||| Sbjct: 718 ccggagccttagcgaaagcaagtcttaatagggcgataaagtcacttcttatggacccga 777 Query: 171 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 230 ||| ||||||||||| |||| |||||||||||||||| | | || || |||||||||| Sbjct: 778 acccgggtgatctattcatggccaggatgaagcttgggtaacacctagtggaggtccgaa 837 Query: 231 ccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 290 ||||| ||||||||| |||| ||||||||| |||| |||||| ||||| ||| |||||| Sbjct: 838 ccgaccgatgttgaaaaatcggcggatgagctgtgaataggggagaaattccaatcgaac 897 Query: 291 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg--actggacatct 348 | ||||||||||| ||||||||||||||||||||||||||| || | | | |||| Sbjct: 898 tcggagctagctggatctccccgaaatgcgttgaggcgcagcggtggctatgagctatct 957 Query: 349 aggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 407 || |||||||| ||||||||| ||||||||||| ||||||||||| ||| ||||||||| Sbjct: 958 agaggtaaagcgactgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaaactc 1017 Query: 408 tgaatactagatat 421 ||||||||||||| Sbjct: 1018 agaatactagatat 1031 Score = 77.8 bits (39), Expect = 3e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 42 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 100 ||||||||||||||||||||||||||||| |||||| ||||| |||||| |||||||| Sbjct: 651 ctgaccgcgtgcctgttgaagaatgagcctgcgacttatagggagtggcaaggttaagg 709
>gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA gene, partial sequence Length = 2451 Score = 244 bits (123), Expect = 2e-61 Identities = 192/215 (89%) Strand = Plus / Plus Query: 123 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 182 |||||||||||||| |||||||||||| ||||| || | |||||||||| |||||||| Sbjct: 262 agcgaaagcgagtcctaatagggcgatcgtcacgctttgtagacccgaacccgggtgatc 321 Query: 183 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 242 || ||||| |||||||||||||||| | |||| ||| ||||||||||||||| |||||| Sbjct: 322 taaccatgtccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgaccgatgtt 381 Query: 243 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 302 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 382 gaaaaatcggcggatgaggtgtggttaggggtgaaatgccaatcgaacccggagctagct 441 Query: 303 ggttctccccgaaatgcgttgaggcgcagcagttg 337 |||||||||||||||| ||||||||||||| |||| Sbjct: 442 ggttctccccgaaatgtgttgaggcgcagcggttg 476 Score = 97.6 bits (49), Expect = 3e-17 Identities = 61/65 (93%) Strand = Plus / Plus Query: 350 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 409 |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 490 ggggtaaagcactgtttcggtgcgggctgcctcagcggtaccaaatcgagacaaactctg 549 Query: 410 aatac 414 ||||| Sbjct: 550 aatac 554 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 41 tctgaccgcgtgcctgttgaagaatgagccggcga 75 |||||||| |||||||||||||||||||||||||| Sbjct: 182 tctgaccgtgtgcctgttgaagaatgagccggcga 216 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 450 gccagtgagacgatgggggataagcttcatcgt 482 |||||||||||| |||||||||||||||||||| Sbjct: 569 gccagtgagacggtgggggataagcttcatcgt 601
>gb|AY584513.1| Nodularia harveyana strain CCAP 1452/1 23S ribosomal RNA gene, partial sequence Length = 2387 Score = 244 bits (123), Expect = 2e-61 Identities = 262/305 (85%), Gaps = 5/305 (1%) Strand = Plus / Plus Query: 113 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 172 |||||||| || |||| ||||||| || ||||||| ||| || |||| ||||||||| Sbjct: 249 ccggagccaaagggaaaccgagtctgaaaagggcgaaaatcagtgtttatagacccgaac 308 Query: 173 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 232 | ||||||||| ||||| |||||||||||||||| | | || ||| |||||||||||| Sbjct: 309 cctggtgatctaaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaacc 368 Query: 233 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 292 ||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||| Sbjct: 369 gactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacca 428 Query: 293 agagctagctggttctccccgaaatgcgttgaggcgcagcagt--tgactggacatctag 350 ||||||||||||||||||||||||| ||| ||||||||| || ||| | | |||| | Sbjct: 429 ggagctagctggttctccccgaaatgtgtttaggcgcagcggtaatgatt--aaatctgg 486 Query: 351 -gggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 409 |||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 487 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 546 Query: 410 aatac 414 ||||| Sbjct: 547 aatac 551 Score = 77.8 bits (39), Expect = 3e-11 Identities = 42/43 (97%) Strand = Plus / Plus Query: 43 tgaccgcgtgcctgttgaagaatgagccggcgactcataggca 85 ||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 184 tgaccgcgtgcctgttgaagaatgagccggcgacttataggca 226 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Plus Query: 450 gccagtgagacgatgggggataagcttcat 479 ||||||||||| ||||||||||||||||| Sbjct: 566 gccagtgagacagtgggggataagcttcat 595
>gb|L49149.1|CRECPRGOLG Chlamydomonas monadina chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmoI genes Length = 8176 Score = 244 bits (123), Expect = 2e-61 Identities = 267/310 (86%), Gaps = 5/310 (1%) Strand = Plus / Plus Query: 113 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 172 |||||||| |||||||||||||||||| | ||| | |||||| ||||||||||||||| Sbjct: 820 ccggagcctaagcgaaagcgagtcttaa-atggct-tcgtcacttcttatggacccgaac 877 Query: 173 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 232 | |||||||||| |||| |||||||||| |||| | | || || | |||||||||||| Sbjct: 878 ccgggtgatctaatcatggccaggatgaaatttgggtaacaccaaccggaggtccgaacc 937 Query: 233 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 292 ||| ||||||||| |||| |||||||||||||| ||||||| ||||| ||| |||||| | Sbjct: 938 gaccgatgttgaaaaatcggcggatgagttgtgattaggggagaaattccaatcgaactc 997 Query: 293 agagctagctggttctccccgaaatgcgttgaggcgcagcagtt--gactggacatctag 350 ||||||||||| ||||||||||||||||||||||||||| ||| || | ||||||| Sbjct: 998 ggagctagctggatctccccgaaatgcgttgaggcgcagcggttaagatttaccatctag 1057 Query: 351 gggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 409 ||||||||| ||||||||||||||||||||| ||||||||||| ||| ||||||||| | Sbjct: 1058 gggtaaagcgactgtttcggtgcgggctgcgaaagcggtaccaagtcgtggcaaactcag 1117 Query: 410 aatactagat 419 |||||||||| Sbjct: 1118 aatactagat 1127 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 42 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 90 |||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 745 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggc 793
>gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete genome Length = 1709204 Score = 242 bits (122), Expect = 9e-61 Identities = 185/206 (89%) Strand = Plus / Plus Query: 123 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 182 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 320233 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 320292 Query: 183 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 242 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 320293 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 320352 Query: 243 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 302 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 320353 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 320412 Query: 303 ggttctccccgaaatgcgttgaggcg 328 ||||||||||||||| |||||||||| Sbjct: 320413 ggttctccccgaaatacgttgaggcg 320438 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 43 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 90 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 320158 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 320205 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 364 tttcggtgcgggctgcgcgagcggtaccaaatcga 398 ||||||||||||||||| |||||||||||||||| Sbjct: 320476 tttcggtgcgggctgcgaaagcggtaccaaatcga 320510
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 242 bits (122), Expect = 9e-61 Identities = 191/214 (89%) Strand = Plus / Minus Query: 115 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 174 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 1775855 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 1775796 Query: 175 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 234 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 1775795 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 1775736 Query: 235 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 294 ||| |||||| | ||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 1775735 ctggcgttgaaaagccagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 1775676 Query: 295 agctagctggttctccccgaaatgcgttgaggcg 328 ||||||||||||||||||||||| |||||||||| Sbjct: 1775675 agctagctggttctccccgaaatacgttgaggcg 1775642 Score = 242 bits (122), Expect = 9e-61 Identities = 191/214 (89%) Strand = Plus / Plus Query: 115 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 174 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 376214 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 376273 Query: 175 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 234 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 376274 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 376333 Query: 235 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 294 ||| |||||| | ||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 376334 ctggcgttgaaaagccagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 376393 Query: 295 agctagctggttctccccgaaatgcgttgaggcg 328 ||||||||||||||||||||||| |||||||||| Sbjct: 376394 agctagctggttctccccgaaatacgttgaggcg 376427 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 43 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 90 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 1775922 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 1775875 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 43 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 90 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 376147 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 376194 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 364 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 414 ||||||| ||||||||| |||||||||||||||||| |||||||||||| Sbjct: 1775604 tttcggtacgggctgcgagagcggtaccaaatcgagatgaactctgaatac 1775554 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 364 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 414 ||||||| ||||||||| |||||||||||||||||| |||||||||||| Sbjct: 376465 tttcggtacgggctgcgagagcggtaccaaatcgagatgaactctgaatac 376515
>gb|AY033310.1| Uncultured Prochlorococcus sp. MB11F02 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3916 Score = 242 bits (122), Expect = 9e-61 Identities = 185/206 (89%) Strand = Plus / Plus Query: 123 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 182 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 2656 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 2715 Query: 183 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 242 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 2716 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 2775 Query: 243 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 302 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 2776 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 2835 Query: 303 ggttctccccgaaatgcgttgaggcg 328 ||||||||||||||| |||||||||| Sbjct: 2836 ggttctccccgaaatacgttgaggcg 2861 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 43 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 90 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2581 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 2628 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 364 tttcggtgcgggctgcgcgagcggtaccaaatcga 398 ||||||||||||||||| |||||||||||||||| Sbjct: 2899 tttcggtgcgggctgcgaaagcggtaccaaatcga 2933
>gb|AY033307.1| Uncultured Prochlorococcus sp. MB11E08 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3917 Score = 242 bits (122), Expect = 9e-61 Identities = 185/206 (89%) Strand = Plus / Plus Query: 123 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 182 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 2657 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 2716 Query: 183 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 242 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 2717 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 2776 Query: 243 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 302 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 2777 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 2836 Query: 303 ggttctccccgaaatgcgttgaggcg 328 ||||||||||||||| |||||||||| Sbjct: 2837 ggttctccccgaaatacgttgaggcg 2862 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 43 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 90 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2582 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 2629 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 364 tttcggtgcgggctgcgcgagcggtaccaaatcga 398 ||||||||||||||||| |||||||||||||||| Sbjct: 2900 tttcggtgcgggctgcgaaagcggtaccaaatcga 2934
>gb|AY033308.1| Uncultured Synechococcus sp. MB11E09 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 4137 Score = 242 bits (122), Expect = 9e-61 Identities = 191/214 (89%) Strand = Plus / Plus Query: 115 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 174 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 2876 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 2935 Query: 175 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 234 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 2936 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 2995 Query: 235 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 294 ||| |||||| | ||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 2996 ctggcgttgaaaagccagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 3055 Query: 295 agctagctggttctccccgaaatgcgttgaggcg 328 ||||||||||||||||||||||| |||||||||| Sbjct: 3056 agctagctggttctccccgaaatacgttgaggcg 3089 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 43 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 90 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2809 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 2856 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 364 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 414 ||||||| ||||||||| |||||||||||||||||| |||||||||||| Sbjct: 3127 tttcggtacgggctgcgagagcggtaccaaatcgagatgaactctgaatac 3177
>gb|AY584523.1| Microcystis sp. strain PCC 7820 23S ribosomal RNA gene, partial sequence Length = 2435 Score = 242 bits (122), Expect = 9e-61 Identities = 253/295 (85%), Gaps = 5/295 (1%) Strand = Plus / Plus Query: 123 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 182 ||||||||||||||| |||||||||| |||| || | |||||||||| |||||||| Sbjct: 259 agcgaaagcgagtctgaatagggcgaacgtcataatttgtagacccgaacccgggtgatc 318 Query: 183 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 242 || ||||| |||||||||||||||| | |||| ||| |||||||||||||||| ||||| Sbjct: 319 taaccatggccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgactaatgtt 378 Query: 243 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 302 ||| ||| |||||||||| |||||||||||||||||||||| |||||| | ||||||||| Sbjct: 379 gaaaaattagcggatgagctgtggttaggggtgaaatgccaatcgaactcggagctagct 438 Query: 303 ggttctccccgaaatgcgttgaggcgcagcagttgactggacatcta---ggggtaaagc 359 |||||||||||||||| ||||||||||||| || | |||| | || |||||||||| Sbjct: 439 ggttctccccgaaatgtgttgaggcgcagcggt--agtggaagtttagtcggggtaaagc 496 Query: 360 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 414 ||||||||| |||||||| | || ||||||||| ||||||||||||||||||| Sbjct: 497 actgtttcgccgcgggctgggagaccggtaccaaggcgaggcaaactctgaatac 551 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 41 tctgaccgcgtgcctgttgaagaatgagccggcgact 77 |||||||| |||||||||||||||||||||||||||| Sbjct: 182 tctgaccgtgtgcctgttgaagaatgagccggcgact 218 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 451 ccagtgagacgatgggggataagcttcatcgt 482 ||||||||||| |||||||||||||||||||| Sbjct: 566 ccagtgagacggtgggggataagcttcatcgt 597
>gb|DQ366719.1| Uncultured Prochlorococcus marinus clone ASNC729 genomic sequence Length = 38521 Score = 242 bits (122), Expect = 9e-61 Identities = 185/206 (89%) Strand = Plus / Minus Query: 123 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 182 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 20224 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 20165 Query: 183 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 242 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 20164 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 20105 Query: 243 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 302 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 20104 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 20045 Query: 303 ggttctccccgaaatgcgttgaggcg 328 ||||||||||||||| |||||||||| Sbjct: 20044 ggttctccccgaaatacgttgaggcg 20019 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 43 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 90 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 20299 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 20252 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 364 tttcggtgcgggctgcgcgagcggtaccaaatcga 398 ||||||||||||||||| |||||||||||||||| Sbjct: 19981 tttcggtgcgggctgcgaaagcggtaccaaatcga 19947
>gb|DQ366714.1| Uncultured Prochlorococcus marinus clone ASNC2150 genomic sequence Length = 37884 Score = 242 bits (122), Expect = 9e-61 Identities = 185/206 (89%) Strand = Plus / Minus Query: 123 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 182 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 1978 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 1919 Query: 183 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 242 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 1918 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 1859 Query: 243 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 302 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 1858 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 1799 Query: 303 ggttctccccgaaatgcgttgaggcg 328 ||||||||||||||| |||||||||| Sbjct: 1798 ggttctccccgaaatacgttgaggcg 1773 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 43 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 90 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2053 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 2006 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 364 tttcggtgcgggctgcgcgagcggtaccaaatcga 398 ||||||||||||||||| |||||||||||||||| Sbjct: 1735 tttcggtgcgggctgcgaaagcggtaccaaatcga 1701
>emb|BX572090.1| Prochlorococcus marinus MED4 complete genome; segment 1/5 Length = 349742 Score = 242 bits (122), Expect = 9e-61 Identities = 185/206 (89%) Strand = Plus / Plus Query: 123 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 182 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 315722 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 315781 Query: 183 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 242 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 315782 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 315841 Query: 243 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 302 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 315842 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 315901 Query: 303 ggttctccccgaaatgcgttgaggcg 328 ||||||||||||||| |||||||||| Sbjct: 315902 ggttctccccgaaatacgttgaggcg 315927 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 43 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 90 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 315647 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 315694 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 364 tttcggtgcgggctgcgcgagcggtaccaaatcga 398 ||||||||||||||||| |||||||||||||||| Sbjct: 315965 tttcggtgcgggctgcgaaagcggtaccaaatcga 315999
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 242 bits (122), Expect = 9e-61 Identities = 185/206 (89%) Strand = Plus / Plus Query: 123 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 182 ||||||||||||||| ||||||||||| |||| || |||| |||||||||| |||||||| Sbjct: 1659136 agcgaaagcgagtctgaatagggcgatagtcagtgtttatagacccgaacccgggtgatc 1659195 Query: 183 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 242 || ||||| |||||||||||||||| | | || ||| ||||||||||||||| |||||| Sbjct: 1659196 taaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgtt 1659255 Query: 243 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 302 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 1659256 gaaaaatcggcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagct 1659315 Query: 303 ggttctccccgaaatgcgttgaggcg 328 ||||||||||||||| |||||||||| Sbjct: 1659316 ggttctccccgaaatacgttgaggcg 1659341 Score = 242 bits (122), Expect = 9e-61 Identities = 185/206 (89%) Strand = Plus / Minus Query: 123 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 182 ||||||||||||||| ||||||||||| |||| || |||| |||||||||| |||||||| Sbjct: 1049608 agcgaaagcgagtctgaatagggcgatagtcagtgtttatagacccgaacccgggtgatc 1049549 Query: 183 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 242 || ||||| |||||||||||||||| | | || ||| ||||||||||||||| |||||| Sbjct: 1049548 taaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgtt 1049489 Query: 243 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 302 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 1049488 gaaaaatcggcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagct 1049429 Query: 303 ggttctccccgaaatgcgttgaggcg 328 ||||||||||||||| |||||||||| Sbjct: 1049428 ggttctccccgaaatacgttgaggcg 1049403 Score = 89.7 bits (45), Expect = 8e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 350 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 409 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 1659364 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 1659423 Query: 410 aatac 414 ||||| Sbjct: 1659424 aatac 1659428 Score = 89.7 bits (45), Expect = 8e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 350 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 409 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 1049380 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 1049321 Query: 410 aatac 414 ||||| Sbjct: 1049320 aatac 1049316 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 43 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 90 |||| |||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 1659061 tgacggcgtgcctgttgaagaatgagccggcgacttataggcactggc 1659108 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 43 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 90 |||| |||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 1049683 tgacggcgtgcctgttgaagaatgagccggcgacttataggcactggc 1049636
>gb|DQ313008.1| Uncultured bacterium clone 3O7D 23S ribosomal RNA gene, partial sequence Length = 723 Score = 242 bits (122), Expect = 9e-61 Identities = 191/214 (89%) Strand = Plus / Plus Query: 115 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 174 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 486 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 545 Query: 175 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 234 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 546 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 605 Query: 235 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 294 ||| |||||| | ||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 606 ctggcgttgaaaagccagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 665 Query: 295 agctagctggttctccccgaaatgcgttgaggcg 328 ||||||||||||||||||||||| |||||||||| Sbjct: 666 agctagctggttctccccgaaatacgttgaggcg 699 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 43 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 90 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 419 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 466
>emb|X00512.1|ANRN03 Anacystis nidulans 23S rRNA gene and flanking regions Length = 3282 Score = 242 bits (122), Expect = 9e-61 Identities = 185/206 (89%) Strand = Plus / Plus Query: 123 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 182 ||||||||||||||| ||||||||||| |||| || |||| |||||||||| |||||||| Sbjct: 898 agcgaaagcgagtctgaatagggcgatagtcagtgtttatagacccgaacccgggtgatc 957 Query: 183 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 242 || ||||| |||||||||||||||| | | || ||| ||||||||||||||| |||||| Sbjct: 958 taaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgtt 1017 Query: 243 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 302 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 1018 gaaaaatcggcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagct 1077 Query: 303 ggttctccccgaaatgcgttgaggcg 328 ||||||||||||||| |||||||||| Sbjct: 1078 ggttctccccgaaatacgttgaggcg 1103 Score = 89.7 bits (45), Expect = 8e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 350 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 409 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 1126 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 1185 Query: 410 aatac 414 ||||| Sbjct: 1186 aatac 1190 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 43 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 90 |||| |||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 823 tgacggcgtgcctgttgaagaatgagccggcgacttataggcactggc 870
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome Length = 2695903 Score = 242 bits (122), Expect = 9e-61 Identities = 185/206 (89%) Strand = Plus / Minus Query: 123 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 182 ||||||||||||||| ||||||||||| |||| || |||| |||||||||| |||||||| Sbjct: 2657650 agcgaaagcgagtctgaatagggcgatagtcagtgtttatagacccgaacccgggtgatc 2657591 Query: 183 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 242 || ||||| |||||||||||||||| | | || ||| ||||||||||||||| |||||| Sbjct: 2657590 taaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgtt 2657531 Query: 243 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 302 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 2657530 gaaaaatcggcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagct 2657471 Query: 303 ggttctccccgaaatgcgttgaggcg 328 ||||||||||||||| |||||||||| Sbjct: 2657470 ggttctccccgaaatacgttgaggcg 2657445 Score = 242 bits (122), Expect = 9e-61 Identities = 185/206 (89%) Strand = Plus / Plus Query: 123 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 182 ||||||||||||||| ||||||||||| |||| || |||| |||||||||| |||||||| Sbjct: 571271 agcgaaagcgagtctgaatagggcgatagtcagtgtttatagacccgaacccgggtgatc 571330 Query: 183 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 242 || ||||| |||||||||||||||| | | || ||| ||||||||||||||| |||||| Sbjct: 571331 taaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgtt 571390 Query: 243 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 302 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 571391 gaaaaatcggcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagct 571450 Query: 303 ggttctccccgaaatgcgttgaggcg 328 ||||||||||||||| |||||||||| Sbjct: 571451 ggttctccccgaaatacgttgaggcg 571476 Score = 89.7 bits (45), Expect = 8e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 350 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 409 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 2657422 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 2657363 Query: 410 aatac 414 ||||| Sbjct: 2657362 aatac 2657358 Score = 89.7 bits (45), Expect = 8e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 350 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 409 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 571499 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 571558 Query: 410 aatac 414 ||||| Sbjct: 571559 aatac 571563 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 43 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 90 |||| |||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2657725 tgacggcgtgcctgttgaagaatgagccggcgacttataggcactggc 2657678 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 43 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 90 |||| |||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 571196 tgacggcgtgcctgttgaagaatgagccggcgacttataggcactggc 571243
>emb|AM084274.1| Glaucocystis nostochinearum cyanelle 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 45.88 Length = 3065 Score = 240 bits (121), Expect = 3e-60 Identities = 221/253 (87%), Gaps = 1/253 (0%) Strand = Plus / Plus Query: 165 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 224 ||||||||| |||||||||| ||||| ||||| |||||||||| | |||||||| |||| Sbjct: 1132 acccgaacccgggtgatctaaccatggccagggtgaagcttgggtaaaactaagtggagg 1191 Query: 225 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 284 |||||| || ||||||||| |||| |||||||||||||||||| |||||||||||| Sbjct: 1192 cccgaactgatcgatgttgaaaaatcgtcggatgagttgtggttagcggtgaaatgccaa 1251 Query: 285 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 344 |||||||| ||||||||||||||||||||||||| ||||||||||||| ||| | | Sbjct: 1252 tcgaacccggagctagctggttctccccgaaatgtgttgaggcgcagcggttaagattat 1311 Query: 345 atc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 403 | | ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 1312 aacttaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgatgcaa 1371 Query: 404 actctgaatacta 416 ||| |||||||| Sbjct: 1372 actaagaatacta 1384 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 41 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 90 |||||| |||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 1010 tctgactgcgtgcctgttgaagaatgagccggcgacttataggtagtggc 1059
>emb|X76084.1|CHNERRNA N.eucaryotum chloroplast 16S rRNA, tRNA-Ile, tRNA-Ala and 23S rRNA genes Length = 5431 Score = 240 bits (121), Expect = 3e-60 Identities = 229/261 (87%), Gaps = 3/261 (1%) Strand = Plus / Plus Query: 164 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 223 |||||||||| |||||||||| |||||||||||||||||||||| | | || | | || Sbjct: 2719 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtaataccacgtgaag 2778 Query: 224 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 283 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 2779 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 2838 Query: 284 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga 343 |||||| | ||||||||||||||||||||||||||||||||||||| | || | || Sbjct: 2839 gtcgaactcggagctagctggttctccccgaaatgcgttgaggcgca-cggtcagcaaga 2897 Query: 344 c-atctaggggt-aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 401 | |||||||||| |||||||||||||||||||||| ||| ||| ||||||||||| ||| Sbjct: 2898 ctatctaggggtaaaagcactgtttcggtgcgggccgcgaaagctgtaccaaatcgtggc 2957 Query: 402 aaactctgaatactagatatg 422 ||||||||||||||||||||| Sbjct: 2958 aaactctgaatactagatatg 2978 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 42 ctgaccgcgtgcctgttgaagaatgagccggcgact 77 |||||||||| |||||||||||||| |||||||||| Sbjct: 2596 ctgaccgcgtacctgttgaagaatgggccggcgact 2631 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 449 ggccagtgagacgatgggggataagcttcat 479 |||||||||||| ||||||||||||||||| Sbjct: 2988 ggccagtgagacagtgggggataagcttcat 3018
>emb|AM084276.1| Compsopogon coeruleus chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 36.94 Length = 4420 Score = 238 bits (120), Expect = 1e-59 Identities = 256/302 (84%) Strand = Plus / Plus Query: 115 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 174 |||||| ||| ||||||||| | ||||| ||||| |||||| ||| |||||||||| Sbjct: 2324 ggagccatagtgaaagcgagcttgaatagagcgatagtcactatttacagacccgaaccc 2383 Query: 175 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 234 || ||||||| ||||| |||||||||| ||| | | | |||||| |||||||||||||| Sbjct: 2384 ggatgatctagccatggccaggatgaaacttaggtaacactaagtggaggtccgaaccga 2443 Query: 235 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 294 ||||||||||| ||||| |||||||| ||||| ||| |||||||| ||| ||||| | | Sbjct: 2444 ctgatgttgaaaaatcaacggatgagctgtggctagcggtgaaataccaatcgaattcgg 2503 Query: 295 agctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggt 354 |||||||||||||||||||||||||||||||||||||| ||||| | | ||||||| Sbjct: 2504 agctagctggttctccccgaaatgcgttgaggcgcagcggttgaaattaaacttaggggt 2563 Query: 355 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 414 |||||||||||||||||||||||||| || ||||||||||||| ||||||| |||||| Sbjct: 2564 aaagcactgtttcggtgcgggctgcgaaagyggtaccaaatcgatgcaaactaagaatac 2623 Query: 415 ta 416 || Sbjct: 2624 ta 2625 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 43 tgaccgcgtgcctgttgaagaatgagccggcgact 77 ||||| ||||||||||||||||||||||||||||| Sbjct: 2256 tgacctcgtgcctgttgaagaatgagccggcgact 2290
>gb|DQ312633.1| Uncultured bacterium clone 3C6G 23S ribosomal RNA gene, partial sequence Length = 807 Score = 234 bits (118), Expect = 2e-58 Identities = 190/214 (88%) Strand = Plus / Plus Query: 115 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 174 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 486 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 545 Query: 175 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 234 |||||||||| ||||| |||||||||||||||| || || ||| |||||||||||||| Sbjct: 546 gggtgatctaaccatggccaggatgaagcttgggcgataccaagtggaggtccgaaccga 605 Query: 235 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 294 ||| |||||| | ||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 606 ctggcgttgaaaagccagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 665 Query: 295 agctagctggttctccccgaaatgcgttgaggcg 328 ||||||||||||||||||||||| |||||||||| Sbjct: 666 agctagctggttctccccgaaatacgttgaggcg 699 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 43 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 90 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 419 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 466 Score = 69.9 bits (35), Expect = 7e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 364 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 414 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 737 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 787
>gb|L42862.1|PNFCPRGOL Pycnococcus sp. CCMP 1203 large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2664 Score = 234 bits (118), Expect = 2e-58 Identities = 256/300 (85%), Gaps = 4/300 (1%) Strand = Plus / Plus Query: 123 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 182 ||||||||||||||| | |||||| ||||| || ||| |||||||||| |||||||| Sbjct: 642 agcgaaagcgagtctgataagggcgtctgtcattggctatagacccgaacccgggtgatc 701 Query: 183 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 242 || || | ||||||||| ||||| | | |||||| ||||||||||||||| |||||| Sbjct: 702 taaccgcggtcaggatgaaacttgggtaagactaagtggaggtccgaaccgaccgatgtt 761 Query: 243 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 302 ||| |||| |||||||| |||||||||||||||||||||| |||||| | ||||||||| Sbjct: 762 gaaaaatcggcggatgaactgtggttaggggtgaaatgccaatcgaactcggagctagct 821 Query: 303 ggttctccccgaaatgcgttgaggcgcagcagtt---gactggaca-tctaggggtaaag 358 |||||||||||||||||||||||||||||| ||| || | | | |||||||||| || Sbjct: 822 ggttctccccgaaatgcgttgaggcgcagcggttgatgattaggctgtctaggggtagag 881 Query: 359 cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 418 |||||| ||||||||||||||| |||||||||||||||| |||||||| |||||||||| Sbjct: 882 cactgtctcggtgcgggctgcgagagcggtaccaaatcgtagcaaactccgaatactaga 941 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 48 gcgtgcctgttgaagaatgagccggcgactcataggcagtggc 90 |||| ||||||||||||||||||||||||| || | ||||||| Sbjct: 572 gcgttcctgttgaagaatgagccggcgacttatggtcagtggc 614
>gb|M36158.1|CHLCPG C.ellipsoidea chloroplast 23S ribosomal RNA gene, complete sequence Length = 3359 Score = 234 bits (118), Expect = 2e-58 Identities = 244/279 (87%), Gaps = 9/279 (3%) Strand = Plus / Plus Query: 150 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 209 ||||||| ||||| ||||||||| |||||||||| ||||| |||||||||||||||| | Sbjct: 786 tgtcacttcttatccacccgaacccgggtgatctaaccatggccaggatgaagcttgggt 845 Query: 210 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 269 |||| ||| ||||||||||||||| ||||||||| |||| ||||||||| |||||||| Sbjct: 846 aaaaccaagtggaggtccgaaccgaccgatgttgaaaaatcggcggatgagctgtggtta 905 Query: 270 ggggtgaaatgccactcgaacccagagctagctggttctccccg-aaatgcgttgaggcg 328 |||||||||||||| |||||| | ||||||||| |||||||||| ||||||||||| ||| Sbjct: 906 ggggtgaaatgccaatcgaactc-gagctagct-gttctccccgtaaatgcgttga-gcg 962 Query: 329 cagcagt---tgact--ggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 383 |||| || ||||| || |||||||||||||||||||||||||||||||||||| || Sbjct: 963 cagcggttgatgacttgggctatctaggggtaaagcactgtttcggtgcgggctgcgaga 1022 Query: 384 gcggtaccaaatcgaggcaaactctgaatactagatatg 422 |||||||||||||| ||||||| ||||||||| |||| Sbjct: 1023 gcggtaccaaatcgtagcaaactaagaatactaggtatg 1061 Score = 89.7 bits (45), Expect = 8e-15 Identities = 54/57 (94%) Strand = Plus / Plus Query: 42 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 98 |||||||||||||||||||||||||||||||||||| ||||| |||||| ||||||| Sbjct: 680 ctgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggcgtggttaa 736 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 451 ccagtgagacgatgggggataagcttcatcgt 482 ||||||||||| |||||||||||||||||||| Sbjct: 1073 ccagtgagacggtgggggataagcttcatcgt 1104
>gb|AY333417.1| Microcystis sp. 'Brown' 16S ribosomal RNA gene, partial sequence; tRNA-Ile gene and 16S-23S ribosomal RNA intergenic spacer, complete sequences; and 23S ribosomal RNA gene, partial sequence Length = 3321 Score = 232 bits (117), Expect = 8e-58 Identities = 221/254 (87%), Gaps = 5/254 (1%) Strand = Plus / Plus Query: 164 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 223 |||||||||| |||||||||| ||||| |||||||||||||||| | |||| ||| ||| Sbjct: 2216 gacccgaacccgggtgatctaaccatggccaggatgaagcttgggtaaaaccaagtggag 2275 Query: 224 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 283 ||||||||||||| |||||||| ||| |||||||||| |||||||||||||||||||||| Sbjct: 2276 gtccgaaccgactaatgttgaaaaattagcggatgagctgtggttaggggtgaaatgcca 2335 Query: 284 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga 343 |||||| | ||||||||||||||||||||||||| ||||||||||||| || | |||| Sbjct: 2336 atcgaactcggagctagctggttctccccgaaatgtgttgaggcgcagcggt--agtgga 2393 Query: 344 catcta---ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 400 | || ||||||||||||||||||| |||||||| | || ||||||||| ||||| Sbjct: 2394 agtttagtcggggtaaagcactgtttcgccgcgggctgggagaccggtaccaaggcgagg 2453 Query: 401 caaactctgaatac 414 |||||||||||||| Sbjct: 2454 caaactctgaatac 2467 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 41 tctgaccgcgtgcctgttgaagaatgagccggcgact 77 |||||||| |||||||||||||||||||||||||||| Sbjct: 2096 tctgaccgtgtgcctgttgaagaatgagccggcgact 2132 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 451 ccagtgagacgatgggggataagcttcatcgt 482 ||||||||||| |||||||||||||||||||| Sbjct: 2482 ccagtgagacggtgggggataagcttcatcgt 2513 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,740,426 Number of Sequences: 3902068 Number of extensions: 2740426 Number of successful extensions: 55218 Number of sequences better than 10.0: 2521 Number of HSP's better than 10.0 without gapping: 2525 Number of HSP's successfully gapped in prelim test: 26 Number of HSP's that attempted gapping in prelim test: 43670 Number of HSP's gapped (non-prelim): 11086 length of query: 482 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 460 effective length of database: 17,147,199,772 effective search space: 7887711895120 effective search space used: 7887711895120 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)