| Clone Name | baal16e23 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK069811.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030D05, full insert sequence Length = 1579 Score = 458 bits (231), Expect = e-126 Identities = 357/399 (89%) Strand = Plus / Plus Query: 11 ggtcgacgacctccgcggcacccctatgagcgttggctcgctcgaggagatcatcgacga 70 |||||| |||||||| |||||||| ||||||||||||||||| |||||||||||||| || Sbjct: 402 ggtcgatgacctccggggcacccccatgagcgttggctcgcttgaggagatcatcgatga 461 Query: 71 gagccacgcgatcgtctcgtcgtccgttgggccggagtactatgtcagcgtactctcgtt 130 ||||||||| ||||||||||||||||| |||||||| |||||||| || || | || || Sbjct: 462 gagccacgccatcgtctcgtcgtccgtcgggccggaatactatgttggcatattatcatt 521 Query: 131 cgtcgacaaggaccagctggagccgggatgctccatactgatgcataacaaggttctctc 190 |||||||||||||||||| ||||| || || |||| ||||||||||||||||||||||| Sbjct: 522 cgtcgacaaggaccagctcgagccagggtgtgccattctgatgcataacaaggttctctc 581 Query: 191 ggtggtcggaattctgcaagatgaagttgatcctatggtttctgtcatgaaagttgagaa 250 ||||| |||||| |||||||||| ||||| |||||||||||||||||||||||||| || Sbjct: 582 tgtggttggaattttgcaagatgaggttgaccctatggtttctgtcatgaaagttgaaaa 641 Query: 251 ggcacctttggagtcttatgctgacattggtggtttggatgcccaaattcaagagatcaa 310 ||||||||||||||||||||| ||||| |||||| |||||||||||||||||||||| || Sbjct: 642 ggcacctttggagtcttatgcggacatcggtggtctggatgcccaaattcaagagattaa 701 Query: 311 agaggcagtggaacttccgttgacacatcctgagctatacgaggacattgggatcaggcc 370 |||||| || || ||||| ||||| |||||||||||||| ||||||||||| || ||||| Sbjct: 702 agaggctgttgagcttcccttgactcatcctgagctatatgaggacattggaataaggcc 761 Query: 371 tccgaagggagtcatactatatggggaacctggaacagg 409 ||| |||||||| ||| |||||||||||||||| ||||| Sbjct: 762 tcccaagggagtaatattatatggggaacctggcacagg 800
>dbj|AB037154.1| Oryza sativa (japonica cultivar-group) OsRPT2b mRNA for 26S proteasome regulatory particle triple-A ATPase subunit2b, complete cds Length = 1616 Score = 458 bits (231), Expect = e-126 Identities = 357/399 (89%) Strand = Plus / Plus Query: 11 ggtcgacgacctccgcggcacccctatgagcgttggctcgctcgaggagatcatcgacga 70 |||||| |||||||| |||||||| ||||||||||||||||| |||||||||||||| || Sbjct: 346 ggtcgatgacctccggggcacccccatgagcgttggctcgcttgaggagatcatcgatga 405 Query: 71 gagccacgcgatcgtctcgtcgtccgttgggccggagtactatgtcagcgtactctcgtt 130 ||||||||| ||||||||||||||||| |||||||| |||||||| || || | || || Sbjct: 406 gagccacgccatcgtctcgtcgtccgtcgggccggaatactatgttggcatattatcatt 465 Query: 131 cgtcgacaaggaccagctggagccgggatgctccatactgatgcataacaaggttctctc 190 |||||||||||||||||| ||||| || || |||| ||||||||||||||||||||||| Sbjct: 466 cgtcgacaaggaccagctcgagccagggtgtgccattctgatgcataacaaggttctctc 525 Query: 191 ggtggtcggaattctgcaagatgaagttgatcctatggtttctgtcatgaaagttgagaa 250 ||||| |||||| |||||||||| ||||| |||||||||||||||||||||||||| || Sbjct: 526 tgtggttggaattttgcaagatgaggttgaccctatggtttctgtcatgaaagttgaaaa 585 Query: 251 ggcacctttggagtcttatgctgacattggtggtttggatgcccaaattcaagagatcaa 310 ||||||||||||||||||||| ||||| |||||| |||||||||||||||||||||| || Sbjct: 586 ggcacctttggagtcttatgcggacatcggtggtctggatgcccaaattcaagagattaa 645 Query: 311 agaggcagtggaacttccgttgacacatcctgagctatacgaggacattgggatcaggcc 370 |||||| || || ||||| ||||| |||||||||||||| ||||||||||| || ||||| Sbjct: 646 agaggctgttgagcttcccttgactcatcctgagctatatgaggacattggaataaggcc 705 Query: 371 tccgaagggagtcatactatatggggaacctggaacagg 409 ||| |||||||| ||| |||||||||||||||| ||||| Sbjct: 706 tcccaagggagtaatattatatggggaacctggcacagg 744
>ref|NM_185558.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1597 Score = 387 bits (195), Expect = e-104 Identities = 351/403 (87%) Strand = Plus / Plus Query: 11 ggtcgacgacctccgcggcacccctatgagcgttggctcgctcgaggagatcatcgacga 70 |||||||||||||||||||||||| |||||||| || || |||||||||||||||||||| Sbjct: 410 ggtcgacgacctccgcggcacccccatgagcgtcggatccctcgaggagatcatcgacga 469 Query: 71 gagccacgcgatcgtctcgtcgtccgttgggccggagtactatgtcagcgtactctcgtt 130 |||||| || |||||||| || ||||| || || |||||||| ||| || | ||||| || Sbjct: 470 gagccatgccatcgtctcctcctccgtcggccccgagtactacgtcggcatcctctcctt 529 Query: 131 cgtcgacaaggaccagctggagccgggatgctccatactgatgcataacaaggttctctc 190 |||||||||||||||||| ||||| || |||||||| || ||||| ||||||||||| || Sbjct: 530 cgtcgacaaggaccagctcgagcccggctgctccatcctcatgcacaacaaggttctgtc 589 Query: 191 ggtggtcggaattctgcaagatgaagttgatcctatggtttctgtcatgaaagttgagaa 250 |||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 590 tgtggtcggaattttgcaagatgaagttgatcctatggtttctgtgatgaaagtggagaa 649 Query: 251 ggcacctttggagtcttatgctgacattggtggtttggatgcccaaattcaagagatcaa 310 || || |||| || ||||||||||||||||| | ||||| || || ||||| ||||| Sbjct: 650 agctccgctggaatcctatgctgacattggtgggctagatgctcagatccaagaaatcaa 709 Query: 311 agaggcagtggaacttccgttgacacatcctgagctatacgaggacattgggatcaggcc 370 ||||||||| || ||||| ||||| |||||||||||||| || |||||||| |||||||| Sbjct: 710 agaggcagttgagcttcctttgacccatcctgagctatatgaagacattggcatcaggcc 769 Query: 371 tccgaagggagtcatactatatggggaacctggaacagggaag 413 || |||||||||||| |||| || |||||||||||||||||| Sbjct: 770 acccaagggagtcatattatacggagaacctggaacagggaag 812
>ref|XM_507415.1| PREDICTED Oryza sativa (japonica cultivar-group), P0034A04.112 mRNA Length = 1599 Score = 387 bits (195), Expect = e-104 Identities = 351/403 (87%) Strand = Plus / Plus Query: 11 ggtcgacgacctccgcggcacccctatgagcgttggctcgctcgaggagatcatcgacga 70 |||||||||||||||||||||||| |||||||| || || |||||||||||||||||||| Sbjct: 409 ggtcgacgacctccgcggcacccccatgagcgtcggatccctcgaggagatcatcgacga 468 Query: 71 gagccacgcgatcgtctcgtcgtccgttgggccggagtactatgtcagcgtactctcgtt 130 |||||| || |||||||| || ||||| || || |||||||| ||| || | ||||| || Sbjct: 469 gagccatgccatcgtctcctcctccgtcggccccgagtactacgtcggcatcctctcctt 528 Query: 131 cgtcgacaaggaccagctggagccgggatgctccatactgatgcataacaaggttctctc 190 |||||||||||||||||| ||||| || |||||||| || ||||| ||||||||||| || Sbjct: 529 cgtcgacaaggaccagctcgagcccggctgctccatcctcatgcacaacaaggttctgtc 588 Query: 191 ggtggtcggaattctgcaagatgaagttgatcctatggtttctgtcatgaaagttgagaa 250 |||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 589 tgtggtcggaattttgcaagatgaagttgatcctatggtttctgtgatgaaagtggagaa 648 Query: 251 ggcacctttggagtcttatgctgacattggtggtttggatgcccaaattcaagagatcaa 310 || || |||| || ||||||||||||||||| | ||||| || || ||||| ||||| Sbjct: 649 agctccgctggaatcctatgctgacattggtgggctagatgctcagatccaagaaatcaa 708 Query: 311 agaggcagtggaacttccgttgacacatcctgagctatacgaggacattgggatcaggcc 370 ||||||||| || ||||| ||||| |||||||||||||| || |||||||| |||||||| Sbjct: 709 agaggcagttgagcttcctttgacccatcctgagctatatgaagacattggcatcaggcc 768 Query: 371 tccgaagggagtcatactatatggggaacctggaacagggaag 413 || |||||||||||| |||| || |||||||||||||||||| Sbjct: 769 acccaagggagtcatattatacggagaacctggaacagggaag 811
>ref|XM_506590.2| PREDICTED Oryza sativa (japonica cultivar-group), P0034A04.112 mRNA Length = 1615 Score = 387 bits (195), Expect = e-104 Identities = 351/403 (87%) Strand = Plus / Plus Query: 11 ggtcgacgacctccgcggcacccctatgagcgttggctcgctcgaggagatcatcgacga 70 |||||||||||||||||||||||| |||||||| || || |||||||||||||||||||| Sbjct: 409 ggtcgacgacctccgcggcacccccatgagcgtcggatccctcgaggagatcatcgacga 468 Query: 71 gagccacgcgatcgtctcgtcgtccgttgggccggagtactatgtcagcgtactctcgtt 130 |||||| || |||||||| || ||||| || || |||||||| ||| || | ||||| || Sbjct: 469 gagccatgccatcgtctcctcctccgtcggccccgagtactacgtcggcatcctctcctt 528 Query: 131 cgtcgacaaggaccagctggagccgggatgctccatactgatgcataacaaggttctctc 190 |||||||||||||||||| ||||| || |||||||| || ||||| ||||||||||| || Sbjct: 529 cgtcgacaaggaccagctcgagcccggctgctccatcctcatgcacaacaaggttctgtc 588 Query: 191 ggtggtcggaattctgcaagatgaagttgatcctatggtttctgtcatgaaagttgagaa 250 |||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 589 tgtggtcggaattttgcaagatgaagttgatcctatggtttctgtgatgaaagtggagaa 648 Query: 251 ggcacctttggagtcttatgctgacattggtggtttggatgcccaaattcaagagatcaa 310 || || |||| || ||||||||||||||||| | ||||| || || ||||| ||||| Sbjct: 649 agctccgctggaatcctatgctgacattggtgggctagatgctcagatccaagaaatcaa 708 Query: 311 agaggcagtggaacttccgttgacacatcctgagctatacgaggacattgggatcaggcc 370 ||||||||| || ||||| ||||| |||||||||||||| || |||||||| |||||||| Sbjct: 709 agaggcagttgagcttcctttgacccatcctgagctatatgaagacattggcatcaggcc 768 Query: 371 tccgaagggagtcatactatatggggaacctggaacagggaag 413 || |||||||||||| |||| || |||||||||||||||||| Sbjct: 769 acccaagggagtcatattatacggagaacctggaacagggaag 811
>dbj|AK105861.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-A02, full insert sequence Length = 1599 Score = 387 bits (195), Expect = e-104 Identities = 351/403 (87%) Strand = Plus / Plus Query: 11 ggtcgacgacctccgcggcacccctatgagcgttggctcgctcgaggagatcatcgacga 70 |||||||||||||||||||||||| |||||||| || || |||||||||||||||||||| Sbjct: 409 ggtcgacgacctccgcggcacccccatgagcgtcggatccctcgaggagatcatcgacga 468 Query: 71 gagccacgcgatcgtctcgtcgtccgttgggccggagtactatgtcagcgtactctcgtt 130 |||||| || |||||||| || ||||| || || |||||||| ||| || | ||||| || Sbjct: 469 gagccatgccatcgtctcctcctccgtcggccccgagtactacgtcggcatcctctcctt 528 Query: 131 cgtcgacaaggaccagctggagccgggatgctccatactgatgcataacaaggttctctc 190 |||||||||||||||||| ||||| || |||||||| || ||||| ||||||||||| || Sbjct: 529 cgtcgacaaggaccagctcgagcccggctgctccatcctcatgcacaacaaggttctgtc 588 Query: 191 ggtggtcggaattctgcaagatgaagttgatcctatggtttctgtcatgaaagttgagaa 250 |||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 589 tgtggtcggaattttgcaagatgaagttgatcctatggtttctgtgatgaaagtggagaa 648 Query: 251 ggcacctttggagtcttatgctgacattggtggtttggatgcccaaattcaagagatcaa 310 || || |||| || ||||||||||||||||| | ||||| || || ||||| ||||| Sbjct: 649 agctccgctggaatcctatgctgacattggtgggctagatgctcagatccaagaaatcaa 708 Query: 311 agaggcagtggaacttccgttgacacatcctgagctatacgaggacattgggatcaggcc 370 ||||||||| || ||||| ||||| |||||||||||||| || |||||||| |||||||| Sbjct: 709 agaggcagttgagcttcctttgacccatcctgagctatatgaagacattggcatcaggcc 768 Query: 371 tccgaagggagtcatactatatggggaacctggaacagggaag 413 || |||||||||||| |||| || |||||||||||||||||| Sbjct: 769 acccaagggagtcatattatacggagaacctggaacagggaag 811
>dbj|AK099264.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023018C04, full insert sequence Length = 1597 Score = 387 bits (195), Expect = e-104 Identities = 351/403 (87%) Strand = Plus / Plus Query: 11 ggtcgacgacctccgcggcacccctatgagcgttggctcgctcgaggagatcatcgacga 70 |||||||||||||||||||||||| |||||||| || || |||||||||||||||||||| Sbjct: 410 ggtcgacgacctccgcggcacccccatgagcgtcggatccctcgaggagatcatcgacga 469 Query: 71 gagccacgcgatcgtctcgtcgtccgttgggccggagtactatgtcagcgtactctcgtt 130 |||||| || |||||||| || ||||| || || |||||||| ||| || | ||||| || Sbjct: 470 gagccatgccatcgtctcctcctccgtcggccccgagtactacgtcggcatcctctcctt 529 Query: 131 cgtcgacaaggaccagctggagccgggatgctccatactgatgcataacaaggttctctc 190 |||||||||||||||||| ||||| || |||||||| || ||||| ||||||||||| || Sbjct: 530 cgtcgacaaggaccagctcgagcccggctgctccatcctcatgcacaacaaggttctgtc 589 Query: 191 ggtggtcggaattctgcaagatgaagttgatcctatggtttctgtcatgaaagttgagaa 250 |||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 590 tgtggtcggaattttgcaagatgaagttgatcctatggtttctgtgatgaaagtggagaa 649 Query: 251 ggcacctttggagtcttatgctgacattggtggtttggatgcccaaattcaagagatcaa 310 || || |||| || ||||||||||||||||| | ||||| || || ||||| ||||| Sbjct: 650 agctccgctggaatcctatgctgacattggtgggctagatgctcagatccaagaaatcaa 709 Query: 311 agaggcagtggaacttccgttgacacatcctgagctatacgaggacattgggatcaggcc 370 ||||||||| || ||||| ||||| |||||||||||||| || |||||||| |||||||| Sbjct: 710 agaggcagttgagcttcctttgacccatcctgagctatatgaagacattggcatcaggcc 769 Query: 371 tccgaagggagtcatactatatggggaacctggaacagggaag 413 || |||||||||||| |||| || |||||||||||||||||| Sbjct: 770 acccaagggagtcatattatacggagaacctggaacagggaag 812
>dbj|AK058311.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-H11, full insert sequence Length = 1615 Score = 387 bits (195), Expect = e-104 Identities = 351/403 (87%) Strand = Plus / Plus Query: 11 ggtcgacgacctccgcggcacccctatgagcgttggctcgctcgaggagatcatcgacga 70 |||||||||||||||||||||||| |||||||| || || |||||||||||||||||||| Sbjct: 409 ggtcgacgacctccgcggcacccccatgagcgtcggatccctcgaggagatcatcgacga 468 Query: 71 gagccacgcgatcgtctcgtcgtccgttgggccggagtactatgtcagcgtactctcgtt 130 |||||| || |||||||| || ||||| || || |||||||| ||| || | ||||| || Sbjct: 469 gagccatgccatcgtctcctcctccgtcggccccgagtactacgtcggcatcctctcctt 528 Query: 131 cgtcgacaaggaccagctggagccgggatgctccatactgatgcataacaaggttctctc 190 |||||||||||||||||| ||||| || |||||||| || ||||| ||||||||||| || Sbjct: 529 cgtcgacaaggaccagctcgagcccggctgctccatcctcatgcacaacaaggttctgtc 588 Query: 191 ggtggtcggaattctgcaagatgaagttgatcctatggtttctgtcatgaaagttgagaa 250 |||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 589 tgtggtcggaattttgcaagatgaagttgatcctatggtttctgtgatgaaagtggagaa 648 Query: 251 ggcacctttggagtcttatgctgacattggtggtttggatgcccaaattcaagagatcaa 310 || || |||| || ||||||||||||||||| | ||||| || || ||||| ||||| Sbjct: 649 agctccgctggaatcctatgctgacattggtgggctagatgctcagatccaagaaatcaa 708 Query: 311 agaggcagtggaacttccgttgacacatcctgagctatacgaggacattgggatcaggcc 370 ||||||||| || ||||| ||||| |||||||||||||| || |||||||| |||||||| Sbjct: 709 agaggcagttgagcttcctttgacccatcctgagctatatgaagacattggcatcaggcc 768 Query: 371 tccgaagggagtcatactatatggggaacctggaacagggaag 413 || |||||||||||| |||| || |||||||||||||||||| Sbjct: 769 acccaagggagtcatattatacggagaacctggaacagggaag 811
>dbj|D17789.1|RICHTBP2 Oryza sativa (japonica cultivar-group) mRNA for homologue of Tat binding protein, complete cds Length = 1609 Score = 387 bits (195), Expect = e-104 Identities = 351/403 (87%) Strand = Plus / Plus Query: 11 ggtcgacgacctccgcggcacccctatgagcgttggctcgctcgaggagatcatcgacga 70 |||||||||||||||||||||||| |||||||| || || |||||||||||||||||||| Sbjct: 377 ggtcgacgacctccgcggcacccccatgagcgtcggatccctcgaggagatcatcgacga 436 Query: 71 gagccacgcgatcgtctcgtcgtccgttgggccggagtactatgtcagcgtactctcgtt 130 |||||| || |||||||| || ||||| || || |||||||| ||| || | ||||| || Sbjct: 437 gagccatgccatcgtctcctcctccgtcggccccgagtactacgtcggcatcctctcctt 496 Query: 131 cgtcgacaaggaccagctggagccgggatgctccatactgatgcataacaaggttctctc 190 |||||||||||||||||| ||||| || |||||||| || ||||| ||||||||||| || Sbjct: 497 cgtcgacaaggaccagctcgagcccggctgctccatcctcatgcacaacaaggttctgtc 556 Query: 191 ggtggtcggaattctgcaagatgaagttgatcctatggtttctgtcatgaaagttgagaa 250 |||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 557 tgtggtcggaattttgcaagatgaagttgatcctatggtttctgtgatgaaagtggagaa 616 Query: 251 ggcacctttggagtcttatgctgacattggtggtttggatgcccaaattcaagagatcaa 310 || || |||| || ||||||||||||||||| | ||||| || || ||||| ||||| Sbjct: 617 agctccgctggaatcctatgctgacattggtgggctagatgctcagatccaagaaatcaa 676 Query: 311 agaggcagtggaacttccgttgacacatcctgagctatacgaggacattgggatcaggcc 370 ||||||||| || ||||| ||||| |||||||||||||| || |||||||| |||||||| Sbjct: 677 agaggcagttgagcttcctttgacccatcctgagctatatgaagacattggcatcaggcc 736 Query: 371 tccgaagggagtcatactatatggggaacctggaacagggaag 413 || |||||||||||| |||| || |||||||||||||||||| Sbjct: 737 acccaagggagtcatattatacggagaacctggaacagggaag 779
>gb|AY105631.1| Zea mays PCO101908 mRNA sequence Length = 1272 Score = 357 bits (180), Expect = 2e-95 Identities = 315/360 (87%) Strand = Plus / Plus Query: 50 gctcgaggagatcatcgacgagagccacgcgatcgtctcgtcgtccgttgggccggagta 109 |||||||||||||||||||||||||||||| |||||||| || ||||| || || ||||| Sbjct: 1 gctcgaggagatcatcgacgagagccacgccatcgtctcctcctccgtcggacccgagta 60 Query: 110 ctatgtcagcgtactctcgttcgtcgacaaggaccagctggagccgggatgctccatact 169 ||||||| || | ||||| ||||| |||||||||||||| |||||||| |||||||| || Sbjct: 61 ctatgtcggcatcctctccttcgttgacaaggaccagctcgagccggggtgctccatcct 120 Query: 170 gatgcataacaaggttctctcggtggtcggaattctgcaagatgaagttgatcctatggt 229 ||||| |||||||||||||| ||||| || || ||||||||||||||||||||||||| Sbjct: 121 catgcacaacaaggttctctctgtggttggtatattgcaagatgaagttgatcctatggt 180 Query: 230 ttctgtcatgaaagttgagaaggcacctttggagtcttatgctgacattggtggtttgga 289 ||||| |||||||||||||| || |||||||| |||||||||||||||||||| |||| Sbjct: 181 atctgtgatgaaagttgagaaagcgcctttggaatcttatgctgacattggtggactgga 240 Query: 290 tgcccaaattcaagagatcaaagaggcagtggaacttccgttgacacatcctgagctata 349 ||| || |||||||| || ||||||||||| || ||||| ||||| || |||||||| || Sbjct: 241 tgctcagattcaagaaattaaagaggcagttgagcttcccttgactcaccctgagctgta 300 Query: 350 cgaggacattgggatcaggcctccgaagggagtcatactatatggggaacctggaacagg 409 || |||||||| || |||||||| |||||||||||| ||||||| |||||||||||||| Sbjct: 301 tgaagacattggtattaggcctcccaagggagtcatattatatggagaacctggaacagg 360
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 280 bits (141), Expect = 3e-72 Identities = 207/229 (90%) Strand = Plus / Plus Query: 181 aggttctctcggtggtcggaattctgcaagatgaagttgatcctatggtttctgtcatga 240 |||||||||| ||||| |||||| |||||||||| ||||| ||||||||||||||||||| Sbjct: 10436459 aggttctctctgtggttggaattttgcaagatgaggttgaccctatggtttctgtcatga 10436518 Query: 241 aagttgagaaggcacctttggagtcttatgctgacattggtggtttggatgcccaaattc 300 ||||||| ||||||||||||||||||||||| ||||| |||||| ||||||||||||||| Sbjct: 10436519 aagttgaaaaggcacctttggagtcttatgcggacatcggtggtctggatgcccaaattc 10436578 Query: 301 aagagatcaaagaggcagtggaacttccgttgacacatcctgagctatacgaggacattg 360 ||||||| |||||||| || || ||||| ||||| |||||||||||||| |||||||||| Sbjct: 10436579 aagagattaaagaggctgttgagcttcccttgactcatcctgagctatatgaggacattg 10436638 Query: 361 ggatcaggcctccgaagggagtcatactatatggggaacctggaacagg 409 | || |||||||| |||||||| ||| |||||||||||||||| ||||| Sbjct: 10436639 gaataaggcctcccaagggagtaatattatatggggaacctggcacagg 10436687 Score = 186 bits (94), Expect = 4e-44 Identities = 154/174 (88%) Strand = Plus / Plus Query: 11 ggtcgacgacctccgcggcacccctatgagcgttggctcgctcgaggagatcatcgacga 70 |||||| |||||||| |||||||| ||||||||||||||||| |||||||||||||| || Sbjct: 10434837 ggtcgatgacctccggggcacccccatgagcgttggctcgcttgaggagatcatcgatga 10434896 Query: 71 gagccacgcgatcgtctcgtcgtccgttgggccggagtactatgtcagcgtactctcgtt 130 ||||||||| ||||||||||||||||| |||||||| |||||||| || || | || || Sbjct: 10434897 gagccacgccatcgtctcgtcgtccgtcgggccggaatactatgttggcatattatcatt 10434956 Query: 131 cgtcgacaaggaccagctggagccgggatgctccatactgatgcataacaaggt 184 |||||||||||||||||| ||||| || || |||| ||||||||||||||||| Sbjct: 10434957 cgtcgacaaggaccagctcgagccagggtgtgccattctgatgcataacaaggt 10435010
>gb|AC137931.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0039F10, complete sequence Length = 139714 Score = 280 bits (141), Expect = 3e-72 Identities = 207/229 (90%) Strand = Plus / Plus Query: 181 aggttctctcggtggtcggaattctgcaagatgaagttgatcctatggtttctgtcatga 240 |||||||||| ||||| |||||| |||||||||| ||||| ||||||||||||||||||| Sbjct: 93012 aggttctctctgtggttggaattttgcaagatgaggttgaccctatggtttctgtcatga 93071 Query: 241 aagttgagaaggcacctttggagtcttatgctgacattggtggtttggatgcccaaattc 300 ||||||| ||||||||||||||||||||||| ||||| |||||| ||||||||||||||| Sbjct: 93072 aagttgaaaaggcacctttggagtcttatgcggacatcggtggtctggatgcccaaattc 93131 Query: 301 aagagatcaaagaggcagtggaacttccgttgacacatcctgagctatacgaggacattg 360 ||||||| |||||||| || || ||||| ||||| |||||||||||||| |||||||||| Sbjct: 93132 aagagattaaagaggctgttgagcttcccttgactcatcctgagctatatgaggacattg 93191 Query: 361 ggatcaggcctccgaagggagtcatactatatggggaacctggaacagg 409 | || |||||||| |||||||| ||| |||||||||||||||| ||||| Sbjct: 93192 gaataaggcctcccaagggagtaatattatatggggaacctggcacagg 93240 Score = 186 bits (94), Expect = 4e-44 Identities = 154/174 (88%) Strand = Plus / Plus Query: 11 ggtcgacgacctccgcggcacccctatgagcgttggctcgctcgaggagatcatcgacga 70 |||||| |||||||| |||||||| ||||||||||||||||| |||||||||||||| || Sbjct: 91390 ggtcgatgacctccggggcacccccatgagcgttggctcgcttgaggagatcatcgatga 91449 Query: 71 gagccacgcgatcgtctcgtcgtccgttgggccggagtactatgtcagcgtactctcgtt 130 ||||||||| ||||||||||||||||| |||||||| |||||||| || || | || || Sbjct: 91450 gagccacgccatcgtctcgtcgtccgtcgggccggaatactatgttggcatattatcatt 91509 Query: 131 cgtcgacaaggaccagctggagccgggatgctccatactgatgcataacaaggt 184 |||||||||||||||||| ||||| || || |||| ||||||||||||||||| Sbjct: 91510 cgtcgacaaggaccagctcgagccagggtgtgccattctgatgcataacaaggt 91563
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 280 bits (141), Expect = 3e-72 Identities = 207/229 (90%) Strand = Plus / Plus Query: 181 aggttctctcggtggtcggaattctgcaagatgaagttgatcctatggtttctgtcatga 240 |||||||||| ||||| |||||| |||||||||| ||||| ||||||||||||||||||| Sbjct: 10434560 aggttctctctgtggttggaattttgcaagatgaggttgaccctatggtttctgtcatga 10434619 Query: 241 aagttgagaaggcacctttggagtcttatgctgacattggtggtttggatgcccaaattc 300 ||||||| ||||||||||||||||||||||| ||||| |||||| ||||||||||||||| Sbjct: 10434620 aagttgaaaaggcacctttggagtcttatgcggacatcggtggtctggatgcccaaattc 10434679 Query: 301 aagagatcaaagaggcagtggaacttccgttgacacatcctgagctatacgaggacattg 360 ||||||| |||||||| || || ||||| ||||| |||||||||||||| |||||||||| Sbjct: 10434680 aagagattaaagaggctgttgagcttcccttgactcatcctgagctatatgaggacattg 10434739 Query: 361 ggatcaggcctccgaagggagtcatactatatggggaacctggaacagg 409 | || |||||||| |||||||| ||| |||||||||||||||| ||||| Sbjct: 10434740 gaataaggcctcccaagggagtaatattatatggggaacctggcacagg 10434788 Score = 186 bits (94), Expect = 4e-44 Identities = 154/174 (88%) Strand = Plus / Plus Query: 11 ggtcgacgacctccgcggcacccctatgagcgttggctcgctcgaggagatcatcgacga 70 |||||| |||||||| |||||||| ||||||||||||||||| |||||||||||||| || Sbjct: 10432938 ggtcgatgacctccggggcacccccatgagcgttggctcgcttgaggagatcatcgatga 10432997 Query: 71 gagccacgcgatcgtctcgtcgtccgttgggccggagtactatgtcagcgtactctcgtt 130 ||||||||| ||||||||||||||||| |||||||| |||||||| || || | || || Sbjct: 10432998 gagccacgccatcgtctcgtcgtccgtcgggccggaatactatgttggcatattatcatt 10433057 Query: 131 cgtcgacaaggaccagctggagccgggatgctccatactgatgcataacaaggt 184 |||||||||||||||||| ||||| || || |||| ||||||||||||||||| Sbjct: 10433058 cgtcgacaaggaccagctcgagccagggtgtgccattctgatgcataacaaggt 10433111
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 224 bits (113), Expect = 2e-55 Identities = 203/233 (87%) Strand = Plus / Minus Query: 181 aggttctctcggtggtcggaattctgcaagatgaagttgatcctatggtttctgtcatga 240 ||||||| || |||||||||||| ||||||||||||||||||||||||||||||| |||| Sbjct: 29383932 aggttctgtctgtggtcggaattttgcaagatgaagttgatcctatggtttctgtgatga 29383873 Query: 241 aagttgagaaggcacctttggagtcttatgctgacattggtggtttggatgcccaaattc 300 |||| ||||| || || |||| || ||||||||||||||||| | ||||| || || | Sbjct: 29383872 aagtggagaaagctccgctggaatcctatgctgacattggtgggctagatgctcagatcc 29383813 Query: 301 aagagatcaaagaggcagtggaacttccgttgacacatcctgagctatacgaggacattg 360 |||| |||||||||||||| || ||||| ||||| |||||||||||||| || ||||||| Sbjct: 29383812 aagaaatcaaagaggcagttgagcttcctttgacccatcctgagctatatgaagacattg 29383753 Query: 361 ggatcaggcctccgaagggagtcatactatatggggaacctggaacagggaag 413 | |||||||| || |||||||||||| |||| || |||||||||||||||||| Sbjct: 29383752 gcatcaggccacccaagggagtcatattatacggagaacctggaacagggaag 29383700 Score = 170 bits (86), Expect = 2e-39 Identities = 152/174 (87%) Strand = Plus / Minus Query: 11 ggtcgacgacctccgcggcacccctatgagcgttggctcgctcgaggagatcatcgacga 70 |||||||||||||||||||||||| |||||||| || || |||||||||||||||||||| Sbjct: 29386144 ggtcgacgacctccgcggcacccccatgagcgtcggatccctcgaggagatcatcgacga 29386085 Query: 71 gagccacgcgatcgtctcgtcgtccgttgggccggagtactatgtcagcgtactctcgtt 130 |||||| || |||||||| || ||||| || || |||||||| ||| || | ||||| || Sbjct: 29386084 gagccatgccatcgtctcctcctccgtcggccccgagtactacgtcggcatcctctcctt 29386025 Query: 131 cgtcgacaaggaccagctggagccgggatgctccatactgatgcataacaaggt 184 |||||||||||||||||| ||||| || |||||||| || ||||| |||||||| Sbjct: 29386024 cgtcgacaaggaccagctcgagcccggctgctccatcctcatgcacaacaaggt 29385971
>dbj|AP004333.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0034A04 Length = 151263 Score = 224 bits (113), Expect = 2e-55 Identities = 203/233 (87%) Strand = Plus / Minus Query: 181 aggttctctcggtggtcggaattctgcaagatgaagttgatcctatggtttctgtcatga 240 ||||||| || |||||||||||| ||||||||||||||||||||||||||||||| |||| Sbjct: 46854 aggttctgtctgtggtcggaattttgcaagatgaagttgatcctatggtttctgtgatga 46795 Query: 241 aagttgagaaggcacctttggagtcttatgctgacattggtggtttggatgcccaaattc 300 |||| ||||| || || |||| || ||||||||||||||||| | ||||| || || | Sbjct: 46794 aagtggagaaagctccgctggaatcctatgctgacattggtgggctagatgctcagatcc 46735 Query: 301 aagagatcaaagaggcagtggaacttccgttgacacatcctgagctatacgaggacattg 360 |||| |||||||||||||| || ||||| ||||| |||||||||||||| || ||||||| Sbjct: 46734 aagaaatcaaagaggcagttgagcttcctttgacccatcctgagctatatgaagacattg 46675 Query: 361 ggatcaggcctccgaagggagtcatactatatggggaacctggaacagggaag 413 | |||||||| || |||||||||||| |||| || |||||||||||||||||| Sbjct: 46674 gcatcaggccacccaagggagtcatattatacggagaacctggaacagggaag 46622 Score = 170 bits (86), Expect = 2e-39 Identities = 152/174 (87%) Strand = Plus / Minus Query: 11 ggtcgacgacctccgcggcacccctatgagcgttggctcgctcgaggagatcatcgacga 70 |||||||||||||||||||||||| |||||||| || || |||||||||||||||||||| Sbjct: 49066 ggtcgacgacctccgcggcacccccatgagcgtcggatccctcgaggagatcatcgacga 49007 Query: 71 gagccacgcgatcgtctcgtcgtccgttgggccggagtactatgtcagcgtactctcgtt 130 |||||| || |||||||| || ||||| || || |||||||| ||| || | ||||| || Sbjct: 49006 gagccatgccatcgtctcctcctccgtcggccccgagtactacgtcggcatcctctcctt 48947 Query: 131 cgtcgacaaggaccagctggagccgggatgctccatactgatgcataacaaggt 184 |||||||||||||||||| ||||| || |||||||| || ||||| |||||||| Sbjct: 48946 cgtcgacaaggaccagctcgagcccggctgctccatcctcatgcacaacaaggt 48893
>gb|AC161749.3| Medicago truncatula chromosome 7 BAC clone mth2-182g1, complete sequence Length = 47909 Score = 161 bits (81), Expect = 2e-36 Identities = 192/229 (83%) Strand = Plus / Minus Query: 181 aggttctctcggtggtcggaattctgcaagatgaagttgatcctatggtttctgtcatga 240 ||||||| || || || ||| |||| ||||||||||||||||| ||||| ||||| |||| Sbjct: 38803 aggttctttctgttgttggacttcttcaagatgaagttgatccaatggtctctgtaatga 38744 Query: 241 aagttgagaaggcacctttggagtcttatgctgacattggtggtttggatgcccaaattc 300 | ||||||||||| |||||||| || |||||||||||||||||||| |||||||| || | Sbjct: 38743 aggttgagaaggctcctttggaatcatatgctgacattggtggtttagatgcccagatac 38684 Query: 301 aagagatcaaagaggcagtggaacttccgttgacacatcctgagctatacgaggacattg 360 | || || ||||| || || || ||||| ||||||||||||| || || || || |||| Sbjct: 38683 aggaaattaaagaagccgtagagcttcccctgacacatcctgaactgtatgaagatattg 38624 Query: 361 ggatcaggcctccgaagggagtcatactatatggggaacctggaacagg 409 | |||| |||||| ||||||||||| ||||||| |||||||| ||||| Sbjct: 38623 gtatcaagcctccaaagggagtcattttatatggagaacctggtacagg 38575
>gb|AC150776.2| Medicago truncatula chromosome 7 BAC clone mte1-45n16, complete sequence Length = 107886 Score = 161 bits (81), Expect = 2e-36 Identities = 192/229 (83%) Strand = Plus / Minus Query: 181 aggttctctcggtggtcggaattctgcaagatgaagttgatcctatggtttctgtcatga 240 ||||||| || || || ||| |||| ||||||||||||||||| ||||| ||||| |||| Sbjct: 9961 aggttctttctgttgttggacttcttcaagatgaagttgatccaatggtctctgtaatga 9902 Query: 241 aagttgagaaggcacctttggagtcttatgctgacattggtggtttggatgcccaaattc 300 | ||||||||||| |||||||| || |||||||||||||||||||| |||||||| || | Sbjct: 9901 aggttgagaaggctcctttggaatcatatgctgacattggtggtttagatgcccagatac 9842 Query: 301 aagagatcaaagaggcagtggaacttccgttgacacatcctgagctatacgaggacattg 360 | || || ||||| || || || ||||| ||||||||||||| || || || || |||| Sbjct: 9841 aggaaattaaagaagccgtagagcttcccctgacacatcctgaactgtatgaagatattg 9782 Query: 361 ggatcaggcctccgaagggagtcatactatatggggaacctggaacagg 409 | |||| |||||| ||||||||||| ||||||| |||||||| ||||| Sbjct: 9781 gtatcaagcctccaaagggagtcattttatatggagaacctggtacagg 9733
>ref|NM_119048.2| Arabidopsis thaliana RPT2A; ATPase AT4G29040 (RPT2A) mRNA, complete cds Length = 1574 Score = 127 bits (64), Expect = 3e-26 Identities = 148/176 (84%) Strand = Plus / Plus Query: 169 tgatgcataacaaggttctctcggtggtcggaattctgcaagatgaagttgatcctatgg 228 |||||||||| ||||||||||| || || || ||||| ||||||||||| ||||| |||| Sbjct: 527 tgatgcataataaggttctctctgttgttgggattctacaagatgaagtggatccaatgg 586 Query: 229 tttctgtcatgaaagttgagaaggcacctttggagtcttatgctgacattggtggtttgg 288 | ||||| |||||||||||||| || ||||||||||| |||||||| ||||| ||||| | Sbjct: 587 tgtctgtgatgaaagttgagaaagctcctttggagtcatatgctgatattggaggtttag 646 Query: 289 atgcccaaattcaagagatcaaagaggcagtggaacttccgttgacacatcctgag 344 | || || ||||| ||||| || || || || || ||||| ||||| ||||||||| Sbjct: 647 aagctcagattcaggagattaaggaagctgttgagcttcctttgactcatcctgag 702
>gb|AY034975.1| Arabidopsis thaliana putative 26S proteasome subunit 4 (At4g29040) mRNA, complete cds Length = 1590 Score = 127 bits (64), Expect = 3e-26 Identities = 148/176 (84%) Strand = Plus / Plus Query: 169 tgatgcataacaaggttctctcggtggtcggaattctgcaagatgaagttgatcctatgg 228 |||||||||| ||||||||||| || || || ||||| ||||||||||| ||||| |||| Sbjct: 527 tgatgcataataaggttctctctgttgttgggattctacaagatgaagtggatccaatgg 586 Query: 229 tttctgtcatgaaagttgagaaggcacctttggagtcttatgctgacattggtggtttgg 288 | ||||| |||||||||||||| || ||||||||||| |||||||| ||||| ||||| | Sbjct: 587 tgtctgtgatgaaagttgagaaagctcctttggagtcatatgctgatattggaggtttag 646 Query: 289 atgcccaaattcaagagatcaaagaggcagtggaacttccgttgacacatcctgag 344 | || || ||||| ||||| || || || || || ||||| ||||| ||||||||| Sbjct: 647 aagctcagattcaggagattaaggaagctgttgagcttcctttgactcatcctgag 702
>dbj|AB161192.1| Arabidopsis thaliana HLR mRNA for 26S proteasome subunit AtRPT2a, complete cds Length = 1574 Score = 127 bits (64), Expect = 3e-26 Identities = 148/176 (84%) Strand = Plus / Plus Query: 169 tgatgcataacaaggttctctcggtggtcggaattctgcaagatgaagttgatcctatgg 228 |||||||||| ||||||||||| || || || ||||| ||||||||||| ||||| |||| Sbjct: 527 tgatgcataataaggttctctctgttgttgggattctacaagatgaagtggatccaatgg 586 Query: 229 tttctgtcatgaaagttgagaaggcacctttggagtcttatgctgacattggtggtttgg 288 | ||||| |||||||||||||| || ||||||||||| |||||||| ||||| ||||| | Sbjct: 587 tgtctgtgatgaaagttgagaaagctcctttggagtcatatgctgatattggaggtttag 646 Query: 289 atgcccaaattcaagagatcaaagaggcagtggaacttccgttgacacatcctgag 344 | || || ||||| ||||| || || || || || ||||| ||||| ||||||||| Sbjct: 647 aagctcagattcaggagattaaggaagctgttgagcttcctttgactcatcctgag 702
>gb|AF123391.1|AF123391 Arabidopsis thaliana 26S proteasome AAA-ATPase subunit RPT2a (RPT2a) mRNA, complete cds Length = 1568 Score = 127 bits (64), Expect = 3e-26 Identities = 148/176 (84%) Strand = Plus / Plus Query: 169 tgatgcataacaaggttctctcggtggtcggaattctgcaagatgaagttgatcctatgg 228 |||||||||| ||||||||||| || || || ||||| ||||||||||| ||||| |||| Sbjct: 526 tgatgcataataaggttctctctgttgttgggattctacaagatgaagtggatccaatgg 585 Query: 229 tttctgtcatgaaagttgagaaggcacctttggagtcttatgctgacattggtggtttgg 288 | ||||| |||||||||||||| || ||||||||||| |||||||| ||||| ||||| | Sbjct: 586 tgtctgtgatgaaagttgagaaagctcctttggagtcatatgctgatattggaggtttag 645 Query: 289 atgcccaaattcaagagatcaaagaggcagtggaacttccgttgacacatcctgag 344 | || || ||||| ||||| || || || || || ||||| ||||| ||||||||| Sbjct: 646 aagctcagattcaggagattaaggaagctgttgagcttcctttgactcatcctgag 701
>ref|NM_127572.2| Arabidopsis thaliana ATP binding / ATPase/ hydrolase/ nucleoside-triphosphatase/ nucleotide binding AT2G20140 mRNA, complete cds Length = 1610 Score = 125 bits (63), Expect = 1e-25 Identities = 120/139 (86%) Strand = Plus / Plus Query: 169 tgatgcataacaaggttctctcggtggtcggaattctgcaagatgaagttgatcctatgg 228 |||||||||||||||| ||||| || || || ||||| ||||||||||| ||||| |||| Sbjct: 497 tgatgcataacaaggtactctctgttgttgggattcttcaagatgaagtggatccaatgg 556 Query: 229 tttctgtcatgaaagttgagaaggcacctttggagtcttatgctgacattggtggtttgg 288 | ||||| |||||||| |||||||| ||||||||||| |||||||||||||| ||||| | Sbjct: 557 tgtctgtgatgaaagtggagaaggctcctttggagtcatatgctgacattggaggtttag 616 Query: 289 atgcccaaattcaagagat 307 | || || ||||| ||||| Sbjct: 617 aagctcagattcaggagat 635
>gb|AY056335.1| Arabidopsis thaliana putative 26S proteasome subunit 4 (At2g20140) mRNA, complete cds Length = 1363 Score = 125 bits (63), Expect = 1e-25 Identities = 120/139 (86%) Strand = Plus / Plus Query: 169 tgatgcataacaaggttctctcggtggtcggaattctgcaagatgaagttgatcctatgg 228 |||||||||||||||| ||||| || || || ||||| ||||||||||| ||||| |||| Sbjct: 461 tgatgcataacaaggtactctctgttgttgggattcttcaagatgaagtggatccaatgg 520 Query: 229 tttctgtcatgaaagttgagaaggcacctttggagtcttatgctgacattggtggtttgg 288 | ||||| |||||||| |||||||| ||||||||||| |||||||||||||| ||||| | Sbjct: 521 tgtctgtgatgaaagtggagaaggctcctttggagtcatatgctgacattggaggtttag 580 Query: 289 atgcccaaattcaagagat 307 | || || ||||| ||||| Sbjct: 581 aagctcagattcaggagat 599
>gb|AY035072.1| Arabidopsis thaliana putative 26S proteasome subunit 4 (At2g20140) mRNA, complete cds Length = 1586 Score = 125 bits (63), Expect = 1e-25 Identities = 120/139 (86%) Strand = Plus / Plus Query: 169 tgatgcataacaaggttctctcggtggtcggaattctgcaagatgaagttgatcctatgg 228 |||||||||||||||| ||||| || || || ||||| ||||||||||| ||||| |||| Sbjct: 479 tgatgcataacaaggtactctctgttgttgggattcttcaagatgaagtggatccaatgg 538 Query: 229 tttctgtcatgaaagttgagaaggcacctttggagtcttatgctgacattggtggtttgg 288 | ||||| |||||||| |||||||| ||||||||||| |||||||||||||| ||||| | Sbjct: 539 tgtctgtgatgaaagtggagaaggctcctttggagtcatatgctgacattggaggtttag 598 Query: 289 atgcccaaattcaagagat 307 | || || ||||| ||||| Sbjct: 599 aagctcagattcaggagat 617
>emb|BX819727.1|CNS0A8HI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS20ZD02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1465 Score = 125 bits (63), Expect = 1e-25 Identities = 120/139 (86%) Strand = Plus / Plus Query: 169 tgatgcataacaaggttctctcggtggtcggaattctgcaagatgaagttgatcctatgg 228 |||||||||||||||| ||||| || || || ||||| ||||||||||| ||||| |||| Sbjct: 502 tgatgcataacaaggtactctctgttgttgggattcttcaagatgaagtggatccaatgg 561 Query: 229 tttctgtcatgaaagttgagaaggcacctttggagtcttatgctgacattggtggtttgg 288 | ||||| |||||||| |||||||| ||||||||||| |||||||||||||| ||||| | Sbjct: 562 tgtctgtgatgaaagtggagaaggctcctttggagtcatatgctgacattggaggtttag 621 Query: 289 atgcccaaattcaagagat 307 | || || ||||| ||||| Sbjct: 622 aagctcagattcaggagat 640
>gb|AY087584.1| Arabidopsis thaliana clone 36815 mRNA, complete sequence Length = 1478 Score = 125 bits (63), Expect = 1e-25 Identities = 120/139 (86%) Strand = Plus / Plus Query: 169 tgatgcataacaaggttctctcggtggtcggaattctgcaagatgaagttgatcctatgg 228 |||||||||||||||| ||||| || || || ||||| ||||||||||| ||||| |||| Sbjct: 487 tgatgcataacaaggtactctctgttgttgggattcttcaagatgaagtggatccaatgg 546 Query: 229 tttctgtcatgaaagttgagaaggcacctttggagtcttatgctgacattggtggtttgg 288 | ||||| |||||||| |||||||| ||||||||||| |||||||||||||| ||||| | Sbjct: 547 tgtctgtgatgaaagtggagaaggctcctttggagtcatatgctgacattggaggtttag 606 Query: 289 atgcccaaattcaagagat 307 | || || ||||| ||||| Sbjct: 607 aagctcagattcaggagat 625
>dbj|AK070759.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023065N19, full insert sequence Length = 947 Score = 119 bits (60), Expect = 7e-24 Identities = 96/108 (88%) Strand = Plus / Plus Query: 306 atcaaagaggcagtggaacttccgttgacacatcctgagctatacgaggacattgggatc 365 |||||||||||||| || ||||| ||||| |||||||||||||| || |||||||| ||| Sbjct: 5 atcaaagaggcagttgagcttcctttgacccatcctgagctatatgaagacattggcatc 64 Query: 366 aggcctccgaagggagtcatactatatggggaacctggaacagggaag 413 ||||| || |||||||||||| |||| || |||||||||||||||||| Sbjct: 65 aggccacccaagggagtcatattatacggagaacctggaacagggaag 112
>gb|AF372977.1|AF372977 Arabidopsis thaliana At2g20140/T2G17.6 mRNA, complete cds Length = 1578 Score = 117 bits (59), Expect = 3e-23 Identities = 119/139 (85%) Strand = Plus / Plus Query: 169 tgatgcataacaaggttctctcggtggtcggaattctgcaagatgaagttgatcctatgg 228 |||||||||||||||| ||||| || || || ||||| ||||||||||| ||||| |||| Sbjct: 484 tgatgcataacaaggtactctctgttgttgggattcttcaagatgaagtggatccaatgg 543 Query: 229 tttctgtcatgaaagttgagaaggcacctttggagtcttatgctgacattggtggtttgg 288 | ||||| ||||||| |||||||| ||||||||||| |||||||||||||| ||||| | Sbjct: 544 tgtctgtggtgaaagtggagaaggctcctttggagtcatatgctgacattggaggtttag 603 Query: 289 atgcccaaattcaagagat 307 | || || ||||| ||||| Sbjct: 604 aagctcagattcaggagat 622
>emb|AL161574.2|ATCHRIV70 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 70 Length = 198429 Score = 111 bits (56), Expect = 2e-21 Identities = 137/164 (83%) Strand = Plus / Plus Query: 181 aggttctctcggtggtcggaattctgcaagatgaagttgatcctatggtttctgtcatga 240 |||||||||| || || || ||||| ||||||||||| ||||| ||||| ||||| |||| Sbjct: 41014 aggttctctctgttgttgggattctacaagatgaagtggatccaatggtgtctgtgatga 41073 Query: 241 aagttgagaaggcacctttggagtcttatgctgacattggtggtttggatgcccaaattc 300 |||||||||| || ||||||||||| |||||||| ||||| ||||| || || || |||| Sbjct: 41074 aagttgagaaagctcctttggagtcatatgctgatattggaggtttagaagctcagattc 41133 Query: 301 aagagatcaaagaggcagtggaacttccgttgacacatcctgag 344 | ||||| || || || || || ||||| ||||| ||||||||| Sbjct: 41134 aggagattaaggaagctgttgagcttcctttgactcatcctgag 41177
>emb|AL078469.2|ATF25O24 Arabidopsis thaliana DNA chromosome 4, BAC clone F25O24 (ESSA project) Length = 97714 Score = 111 bits (56), Expect = 2e-21 Identities = 137/164 (83%) Strand = Plus / Plus Query: 181 aggttctctcggtggtcggaattctgcaagatgaagttgatcctatggtttctgtcatga 240 |||||||||| || || || ||||| ||||||||||| ||||| ||||| ||||| |||| Sbjct: 66045 aggttctctctgttgttgggattctacaagatgaagtggatccaatggtgtctgtgatga 66104 Query: 241 aagttgagaaggcacctttggagtcttatgctgacattggtggtttggatgcccaaattc 300 |||||||||| || ||||||||||| |||||||| ||||| ||||| || || || |||| Sbjct: 66105 aagttgagaaagctcctttggagtcatatgctgatattggaggtttagaagctcagattc 66164 Query: 301 aagagatcaaagaggcagtggaacttccgttgacacatcctgag 344 | ||||| || || || || || ||||| ||||| ||||||||| Sbjct: 66165 aggagattaaggaagctgttgagcttcctttgactcatcctgag 66208
>emb|AL078470.1|ATF19B15 Arabidopsis thaliana DNA chromosome 4, BAC clone F19B15 (ESSA project) Length = 101679 Score = 111 bits (56), Expect = 2e-21 Identities = 137/164 (83%) Strand = Plus / Plus Query: 181 aggttctctcggtggtcggaattctgcaagatgaagttgatcctatggtttctgtcatga 240 |||||||||| || || || ||||| ||||||||||| ||||| ||||| ||||| |||| Sbjct: 24541 aggttctctctgttgttgggattctacaagatgaagtggatccaatggtgtctgtgatga 24600 Query: 241 aagttgagaaggcacctttggagtcttatgctgacattggtggtttggatgcccaaattc 300 |||||||||| || ||||||||||| |||||||| ||||| ||||| || || || |||| Sbjct: 24601 aagttgagaaagctcctttggagtcatatgctgatattggaggtttagaagctcagattc 24660 Query: 301 aagagatcaaagaggcagtggaacttccgttgacacatcctgag 344 | ||||| || || || || || ||||| ||||| ||||||||| Sbjct: 24661 aggagattaaggaagctgttgagcttcctttgactcatcctgag 24704
>gb|DQ222507.1| Solanum tuberosum clone 115D06 26S proteasome subunit 4-like mRNA, complete cds Length = 1581 Score = 105 bits (53), Expect = 1e-19 Identities = 158/193 (81%) Strand = Plus / Plus Query: 169 tgatgcataacaaggttctctcggtggtcggaattctgcaagatgaagttgatcctatgg 228 |||||||||| |||||||| || || || || |||| ||||| || |||||||| |||| Sbjct: 501 tgatgcataataaggttctatctgttgttgggcttctacaagacgatgttgatccaatgg 560 Query: 229 tttctgtcatgaaagttgagaaggcacctttggagtcttatgctgacattggtggtttgg 288 | ||||||||||| |||||||| || |||||||| || || ||||| || ||||| |||| Sbjct: 561 tgtctgtcatgaaggttgagaaagctcctttggaatcctacgctgatataggtggattgg 620 Query: 289 atgcccaaattcaagagatcaaagaggcagtggaacttccgttgacacatcctgagctat 348 |||| || ||||| ||||| ||||| || || || ||||| ||||| || |||||||| | Sbjct: 621 atgctcagattcaggagattaaagaagctgttgagcttcccttgactcaccctgagctgt 680 Query: 349 acgaggacattgg 361 | || |||||||| Sbjct: 681 atgaagacattgg 693
>gb|AC006081.4| Arabidopsis thaliana chromosome 2 clone T2G17 map mi148, complete sequence Length = 97814 Score = 101 bits (51), Expect = 2e-18 Identities = 93/107 (86%) Strand = Plus / Minus Query: 201 attctgcaagatgaagttgatcctatggtttctgtcatgaaagttgagaaggcacctttg 260 ||||| ||||||||||| ||||| ||||| ||||| |||||||| |||||||| |||||| Sbjct: 25424 attcttcaagatgaagtggatccaatggtgtctgtgatgaaagtggagaaggctcctttg 25365 Query: 261 gagtcttatgctgacattggtggtttggatgcccaaattcaagagat 307 ||||| |||||||||||||| ||||| || || || ||||| ||||| Sbjct: 25364 gagtcatatgctgacattggaggtttagaagctcagattcaggagat 25318
>gb|AF432345.1| Tortula ruralis 26S proteasome regulatory subunit IV (RPT2) mRNA, complete cds Length = 1845 Score = 89.7 bits (45), Expect = 7e-15 Identities = 246/313 (78%) Strand = Plus / Plus Query: 54 gaggagatcatcgacgagagccacgcgatcgtctcgtcgtccgttgggccggagtactat 113 |||||||||||||| |||| |||||||| || || || || |||||||| ||||| ||| Sbjct: 541 gaggagatcatcgatgagaatcacgcgattgtgtcttcctctgttgggcctgagtattat 600 Query: 114 gtcagcgtactctcgttcgtcgacaaggaccagctggagccgggatgctccatactgatg 173 || | | | |||||||| || ||||| || | | ||| || ||| |||| || ||| Sbjct: 601 gtgaatatcttgtcgttcgtggataaggatcaacccgggcccgggtgcgccattcttatg 660 Query: 174 cataacaaggttctctcggtggtcggaattctgcaagatgaagttgatcctatggtttct 233 || |||||||||||||| || || || | |||||||||| || || || |||||||| Sbjct: 661 cacaacaaggttctctcagttgtggggttattgcaagatgatgtggacccgatggtttca 720 Query: 234 gtcatgaaagttgagaaggcacctttggagtcttatgctgacattggtggtttggatgcc 293 || ||||| |||||||| || ||| ||||||| || ||||| |||||||| | ||| | Sbjct: 721 gtgatgaaggttgagaaagcccctctggagtcatacgctgatattggtggactagatcct 780 Query: 294 caaattcaagagatcaaagaggcagtggaacttccgttgacacatcctgagctatacgag 353 || ||||| || ||||| || |||||||| || || | |||||||||||||| |||||| Sbjct: 781 cagattcaggaaatcaaggaagcagtggagctgcccctcacacatcctgagctttacgag 840 Query: 354 gacattgggatca 366 |||||||| |||| Sbjct: 841 gacattggtatca 853
>emb|AJ293726.1|BNA293726 Brassica napus homologue of AT4g29030 gene, homologue of SPH gene, homologue of AT4g29040 gene (pseudogene) and homologue of AT4g29060 gene (pseudogene, partial) Length = 15378 Score = 85.7 bits (43), Expect = 1e-13 Identities = 91/107 (85%) Strand = Plus / Plus Query: 201 attctgcaagatgaagttgatcctatggtttctgtcatgaaagttgagaaggcacctttg 260 ||||| || ||||| || ||||| ||||| || || ||||||||||||||||| || ||| Sbjct: 11356 attctacacgatgaggtggatccgatggtgtcggtgatgaaagttgagaaggctccgttg 11415 Query: 261 gagtcttatgctgacattggtggtttggatgcccaaattcaagagat 307 |||||||||||||||||||| ||||| || || || ||||| ||||| Sbjct: 11416 gagtcttatgctgacattggaggtttagaggctcagattcaggagat 11462
>gb|AY108940.1| Zea mays PCO101909 mRNA sequence Length = 961 Score = 85.7 bits (43), Expect = 1e-13 Identities = 73/83 (87%) Strand = Plus / Plus Query: 324 cttccgttgacacatcctgagctatacgaggacattgggatcaggcctccgaagggagtc 383 ||||| ||||| ||||||||| | || || ||||||||||||||||| || ||||||||| Sbjct: 5 cttcccttgactcatcctgagttgtatgaagacattgggatcaggccacccaagggagtc 64 Query: 384 atactatatggggaacctggaac 406 ||| ||||||| ||||||||||| Sbjct: 65 atattatatggcgaacctggaac 87
>emb|AJ291500.1|BNA291500 Brassica napus homologue of SPH gene, AT4g29040 gene and AT4g29100 gene, clone SI13 Length = 14775 Score = 81.8 bits (41), Expect = 2e-12 Identities = 86/101 (85%) Strand = Plus / Plus Query: 207 caagatgaagttgatcctatggtttctgtcatgaaagttgagaaggcacctttggagtct 266 |||||||| || ||||| ||||| ||||| ||||||||||||||||| || |||||||| Sbjct: 2890 caagatgaggtggatccgatggtgtctgtgatgaaagttgagaaggctccgttggagtcg 2949 Query: 267 tatgctgacattggtggtttggatgcccaaattcaagagat 307 |||||||| ||||| ||||| || || || ||||| ||||| Sbjct: 2950 tatgctgatattggaggtttagaagctcagattcaggagat 2990
>emb|BX038369.1|CNS091RP Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAB2DA06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 720 Score = 79.8 bits (40), Expect = 6e-12 Identities = 99/116 (85%), Gaps = 2/116 (1%) Strand = Plus / Minus Query: 49 cgctcgaggagatcatcgacgagagccacgcgatcgtctcgtcgtccgttgggccg-gag 107 |||| ||||||||||||||||| | |||||| ||||| ||| |||| || |||| | ||| Sbjct: 318 cgctggaggagatcatcgacgataaccacgcaatcgtgtcgacgtcggt-gggcagcgag 260 Query: 108 tactatgtcagcgtactctcgttcgtcgacaaggaccagctggagccgggatgctc 163 |||| |||||| | || |||||||||||||||||||||||||| ||||| ||||| Sbjct: 259 cactacgtcagcatcctgtcgttcgtcgacaaggaccagctggaaccgggctgctc 204
>emb|BX017976.1|CNS08M18 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA27AF10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 949 Score = 79.8 bits (40), Expect = 6e-12 Identities = 99/116 (85%), Gaps = 2/116 (1%) Strand = Plus / Plus Query: 49 cgctcgaggagatcatcgacgagagccacgcgatcgtctcgtcgtccgttgggccg-gag 107 |||| ||||||||||||||||| | |||||| ||||| ||| |||| || |||| | ||| Sbjct: 347 cgctggaggagatcatcgacgataaccacgcaatcgtgtcgacgtcggt-gggcagcgag 405 Query: 108 tactatgtcagcgtactctcgttcgtcgacaaggaccagctggagccgggatgctc 163 |||| |||||| | || |||||||||||||||||||||||||| ||||| ||||| Sbjct: 406 cactacgtcagcatcctgtcgttcgtcgacaaggaccagctggaaccgggctgctc 461
>emb|BX009769.1|CNS08FP9 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA15DB01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 882 Score = 79.8 bits (40), Expect = 6e-12 Identities = 99/116 (85%), Gaps = 2/116 (1%) Strand = Plus / Plus Query: 49 cgctcgaggagatcatcgacgagagccacgcgatcgtctcgtcgtccgttgggccg-gag 107 |||| ||||||||||||||||| | |||||| ||||| ||| |||| || |||| | ||| Sbjct: 417 cgctggaggagatcatcgacgataaccacgcaatcgtgtcgacgtcggt-gggcagcgag 475 Query: 108 tactatgtcagcgtactctcgttcgtcgacaaggaccagctggagccgggatgctc 163 |||| |||||| | || |||||||||||||||||||||||||| ||||| ||||| Sbjct: 476 cactacgtcagcatcctgtcgttcgtcgacaaggaccagctggaaccgggctgctc 531
>ref|XM_312924.2| Anopheles gambiae str. PEST ENSANGP00000014726 (ENSANGG00000012237), partial mRNA Length = 1317 Score = 79.8 bits (40), Expect = 6e-12 Identities = 99/116 (85%), Gaps = 2/116 (1%) Strand = Plus / Plus Query: 49 cgctcgaggagatcatcgacgagagccacgcgatcgtctcgtcgtccgttgggccg-gag 107 |||| ||||||||||||||||| | |||||| ||||| ||| |||| || |||| | ||| Sbjct: 326 cgctggaggagatcatcgacgataaccacgcaatcgtgtcgacgtcggt-gggcagcgag 384 Query: 108 tactatgtcagcgtactctcgttcgtcgacaaggaccagctggagccgggatgctc 163 |||| |||||| | || |||||||||||||||||||||||||| ||||| ||||| Sbjct: 385 cactacgtcagcatcctgtcgttcgtcgacaaggaccagctggaaccgggctgctc 440
>ref|XM_312923.2| Anopheles gambiae str. PEST ENSANGP00000014769 (ENSANGG00000012280), partial mRNA Length = 1317 Score = 79.8 bits (40), Expect = 6e-12 Identities = 99/116 (85%), Gaps = 2/116 (1%) Strand = Plus / Plus Query: 49 cgctcgaggagatcatcgacgagagccacgcgatcgtctcgtcgtccgttgggccg-gag 107 |||| ||||||||||||||||| | |||||| ||||| ||| |||| || |||| | ||| Sbjct: 326 cgctggaggagatcatcgacgataaccacgcaatcgtgtcgacgtcggt-gggcagcgag 384 Query: 108 tactatgtcagcgtactctcgttcgtcgacaaggaccagctggagccgggatgctc 163 |||| |||||| | || |||||||||||||||||||||||||| ||||| ||||| Sbjct: 385 cactacgtcagcatcctgtcgttcgtcgacaaggaccagctggaaccgggctgctc 440
>ref|XM_312720.2| Anopheles gambiae str. PEST ENSANGP00000017106 (ENSANGG00000014617), partial mRNA Length = 1317 Score = 79.8 bits (40), Expect = 6e-12 Identities = 99/116 (85%), Gaps = 2/116 (1%) Strand = Plus / Plus Query: 49 cgctcgaggagatcatcgacgagagccacgcgatcgtctcgtcgtccgttgggccg-gag 107 |||| ||||||||||||||||| | |||||| ||||| ||| |||| || |||| | ||| Sbjct: 326 cgctggaggagatcatcgacgataaccacgcaatcgtgtcgacgtcggt-gggcagcgag 384 Query: 108 tactatgtcagcgtactctcgttcgtcgacaaggaccagctggagccgggatgctc 163 |||| |||||| | || |||||||||||||||||||||||||| ||||| ||||| Sbjct: 385 cactacgtcagcatcctgtcgttcgtcgacaaggaccagctggaaccgggctgctc 440
>ref|XM_312719.2| Anopheles gambiae str. PEST ENSANGP00000017098 (ENSANGG00000014609), partial mRNA Length = 1317 Score = 79.8 bits (40), Expect = 6e-12 Identities = 99/116 (85%), Gaps = 2/116 (1%) Strand = Plus / Plus Query: 49 cgctcgaggagatcatcgacgagagccacgcgatcgtctcgtcgtccgttgggccg-gag 107 |||| ||||||||||||||||| | |||||| ||||| ||| |||| || |||| | ||| Sbjct: 326 cgctggaggagatcatcgacgataaccacgcaatcgtgtcgacgtcggt-gggcagcgag 384 Query: 108 tactatgtcagcgtactctcgttcgtcgacaaggaccagctggagccgggatgctc 163 |||| |||||| | || |||||||||||||||||||||||||| ||||| ||||| Sbjct: 385 cactacgtcagcatcctgtcgttcgtcgacaaggaccagctggaaccgggctgctc 440
>emb|BX067931.1|CNS09OKV Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC51DD11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 935 Score = 71.9 bits (36), Expect = 2e-09 Identities = 98/116 (84%), Gaps = 2/116 (1%) Strand = Plus / Plus Query: 49 cgctcgaggagatcatcgacgagagccacgcgatcgtctcgtcgtccgttgggccg-gag 107 |||| ||||||||||||||||| | |||||| ||||| ||| |||| || |||| | ||| Sbjct: 351 cgctggaggagatcatcgacgataaccacgcaatcgtgtcgacgtcggt-gggcagcgag 409 Query: 108 tactatgtcagcgtactctcgttcgtcgacaaggaccagctggagccgggatgctc 163 |||| |||||| | || ||||||||||||||||||||| |||| ||||| ||||| Sbjct: 410 cactacgtcagcatcctgtcgttcgtcgacaaggaccagttggaaccgggctgctc 465
>emb|BX041812.1|CNS094FC Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC13BH06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 546 Score = 71.9 bits (36), Expect = 2e-09 Identities = 98/116 (84%), Gaps = 2/116 (1%) Strand = Plus / Plus Query: 49 cgctcgaggagatcatcgacgagagccacgcgatcgtctcgtcgtccgttgggccg-gag 107 |||| ||||||||||||||||| | |||||| ||||| ||| |||| || |||| | ||| Sbjct: 345 cgctggaggagatcatcgacgataaccacgcaatcgtgtcgacgtcggt-gggcagcgag 403 Query: 108 tactatgtcagcgtactctcgttcgtcgacaaggaccagctggagccgggatgctc 163 |||| |||||| | || ||||||||||||||||||||| |||| ||||| ||||| Sbjct: 404 cactacgtcagcatcctgtcgttcgtcgacaaggaccagttggaaccgggctgctc 459
>gb|BT020983.1| Bos taurus proteasome (prosome, macropain) 26S subunit, ATPase, 1 (PSMC1), mRNA, complete cds Length = 1534 Score = 69.9 bits (35), Expect = 6e-09 Identities = 92/111 (82%) Strand = Plus / Plus Query: 54 gaggagatcatcgacgagagccacgcgatcgtctcgtcgtccgttgggccggagtactat 113 |||||||||||||| || | |||||| ||||| || |||| || || ||||| |||| Sbjct: 360 gaggagatcatcgatgacaaccacgccatcgtgtccacgtctgtgggctcggagcactac 419 Query: 114 gtcagcgtactctcgttcgtcgacaaggaccagctggagccgggatgctcc 164 |||||| | ||||||||||| |||||||||| ||||||||| || |||||| Sbjct: 420 gtcagcatcctctcgttcgtagacaaggacctgctggagcccggctgctcc 470
>ref|NM_001014855.1| Bos taurus proteasome 26S ATPase subunit 1 (PSMC1), mRNA Length = 1534 Score = 69.9 bits (35), Expect = 6e-09 Identities = 92/111 (82%) Strand = Plus / Plus Query: 54 gaggagatcatcgacgagagccacgcgatcgtctcgtcgtccgttgggccggagtactat 113 |||||||||||||| || | |||||| ||||| || |||| || || ||||| |||| Sbjct: 360 gaggagatcatcgatgacaaccacgccatcgtgtccacgtctgtgggctcggagcactac 419 Query: 114 gtcagcgtactctcgttcgtcgacaaggaccagctggagccgggatgctcc 164 |||||| | ||||||||||| |||||||||| ||||||||| || |||||| Sbjct: 420 gtcagcatcctctcgttcgtagacaaggacctgctggagcccggctgctcc 470
>emb|BX067932.1|CNS09OKW Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC51DD11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 883 Score = 63.9 bits (32), Expect = 4e-07 Identities = 97/116 (83%), Gaps = 2/116 (1%) Strand = Plus / Minus Query: 49 cgctcgaggagatcatcgacgagagccacgcgatcgtctcgtcgtccgttgggccg-gag 107 |||| ||||||||||||||||| | |||||| ||||| ||| |||| || |||| | ||| Sbjct: 712 cgctggaggagatcatcgacgataaccacgcaatcgtgtcgacgtcggt-gggcagcgag 654 Query: 108 tactatgtcagcgtactctcgttcgtcgacaaggaccagctggagccgggatgctc 163 | || |||||| | || ||||||||||||||||||||| |||| ||||| ||||| Sbjct: 653 caatacgtcagcatcctgtcgttcgtcgacaaggaccagttggaaccgggctgctc 598
>gb|AF517885.1| Griffithsia japonica isolate Gj112 26S proteasome subunit mRNA, partial cds Length = 896 Score = 60.0 bits (30), Expect = 6e-06 Identities = 72/86 (83%) Strand = Plus / Plus Query: 294 caaattcaagagatcaaagaggcagtggaacttccgttgacacatcctgagctatacgag 353 ||||| || ||||| || ||||| || || || ||| |||||||||||||||| |||||| Sbjct: 110 caaatccaggagattaaggaggccgttgagctgccgctgacacatcctgagctgtacgag 169 Query: 354 gacattgggatcaggcctccgaaggg 379 |||||||| |||| || |||||||| Sbjct: 170 gacattggcatcaaaccaccgaaggg 195
>emb|BX019099.1|CNS08MWF Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA29AB01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 997 Score = 60.0 bits (30), Expect = 6e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 126 tcgttcgtcgacaaggaccagctggagccgggatgctc 163 |||||||||||||||||||||||||| ||||| ||||| Sbjct: 68 tcgttcgtcgacaaggaccagctggaaccgggctgctc 105
>ref|XM_660561.1| Cryptosporidium hominis TU502 26S proteasome AAA-ATPase subunit RPT2a (Chro.40138) partial mRNA Length = 1338 Score = 58.0 bits (29), Expect = 2e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 210 gatgaagttgatcctatggtttctgtcatgaaagttgagaaggcacctttgga 262 ||||| || |||||| |||||||||| ||||||||||| ||||| |||||||| Sbjct: 508 gatgaggtggatcctttggtttctgtaatgaaagttgataaggctcctttgga 560
>emb|BX060993.1|CNS09J85 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC41CD06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1018 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 109 actatgtcagcgtactctcgttcgtcgacaaggaccagctggagccgggatgctc 163 |||| |||||| | || |||||||||||||||| ||||||||| ||||| ||||| Sbjct: 374 actacgtcagcatcctgtcgttcgtcgacaagggccagctggaaccgggctgctc 428
>ref|XM_712719.1| Candida albicans SC5314 putative proteasome regulatory particle ATPase Rpt2p (CaO19_5440), mRNA Length = 1398 Score = 52.0 bits (26), Expect = 0.001 Identities = 149/190 (78%) Strand = Plus / Plus Query: 207 caagatgaagttgatcctatggtttctgtcatgaaagttgagaaggcacctttggagtct 266 |||||||| | ||||||||||||||| || |||||| | || || | ||| || || Sbjct: 493 caagatgatgctgatcctatggtttcggtaatgaaactcgacaaatcccctacagaatca 552 Query: 267 tatgctgacattggtggtttggatgcccaaattcaagagatcaaagaggcagtggaactt 326 ||||| |||||||| || ||||| | ||||||||||| |||||||| |||| ||| | Sbjct: 553 tatgccgacattggggggttggaatcacaaattcaagaaatcaaagaatcagtcgaattg 612 Query: 327 ccgttgacacatcctgagctatacgaggacattgggatcaggcctccgaagggagtcata 386 || |||||||||||||| | ||||| || || || |||| |||||| || || || ||| Sbjct: 613 ccattgacacatcctgaattgtacgaagaaatgggaatcaagcctccaaaaggtgtgata 672 Query: 387 ctatatgggg 396 ||||||||| Sbjct: 673 ttatatgggg 682
>ref|XM_712625.1| Candida albicans SC5314 putative proteasome regulatory particle ATPase Rpt2p (CaO19_12895), mRNA Length = 1398 Score = 52.0 bits (26), Expect = 0.001 Identities = 149/190 (78%) Strand = Plus / Plus Query: 207 caagatgaagttgatcctatggtttctgtcatgaaagttgagaaggcacctttggagtct 266 |||||||| | ||||||||||||||| || |||||| | || || | ||| || || Sbjct: 493 caagatgatgctgatcctatggtttcggtaatgaaactcgacaaatcccctacagaatca 552 Query: 267 tatgctgacattggtggtttggatgcccaaattcaagagatcaaagaggcagtggaactt 326 ||||| |||||||| || ||||| | ||||||||||| |||||||| |||| ||| | Sbjct: 553 tatgccgacattggggggttggaatcacaaattcaagaaatcaaagaatcagtcgaattg 612 Query: 327 ccgttgacacatcctgagctatacgaggacattgggatcaggcctccgaagggagtcata 386 || |||||||||||||| | ||||| || || || |||| |||||| || || || ||| Sbjct: 613 ccattgacacatcctgaattgtacgaagaaatgggaatcaagcctccaaaaggtgtgata 672 Query: 387 ctatatgggg 396 ||||||||| Sbjct: 673 ttatatgggg 682
>ref|XM_360102.1| Magnaporthe grisea 70-15 hypothetical protein (MG05477.4) partial mRNA Length = 1380 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 261 gagtcttatgctgacattggtggtttgga 289 ||||||||||| ||||||||||||||||| Sbjct: 601 gagtcttatgccgacattggtggtttgga 629
>ref|XM_948843.1| Theileria annulata strain Ankara 26S proteasome subunit 4 (TA05950) partial mRNA Length = 1317 Score = 48.1 bits (24), Expect = 0.023 Identities = 48/56 (85%) Strand = Plus / Plus Query: 297 attcaagagatcaaagaggcagtggaacttccgttgacacatcctgagctatacga 352 ||||||||||||||||||||||| || || ||||| ||| |||||||| ||||| Sbjct: 574 attcaagagatcaaagaggcagttgagctaccgttaacaaggcctgagctgtacga 629 Score = 48.1 bits (24), Expect = 0.023 Identities = 30/32 (93%) Strand = Plus / Plus Query: 54 gaggagatcatcgacgagagccacgcgatcgt 85 ||||||||||||||||||| |||||| ||||| Sbjct: 331 gaggagatcatcgacgagaaccacgccatcgt 362
>gb|AE017345.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 5, complete sequence Length = 1507550 Score = 46.1 bits (23), Expect = 0.090 Identities = 32/35 (91%) Strand = Plus / Plus Query: 294 caaattcaagagatcaaagaggcagtggaacttcc 328 ||||||||||| ||||||||| |||| |||||||| Sbjct: 858498 caaattcaagaaatcaaagagtcagttgaacttcc 858532
>ref|XM_570849.1| Cryptococcus neoformans var. neoformans JEC21 endopeptidase (CNE03020) partial mRNA Length = 1436 Score = 46.1 bits (23), Expect = 0.090 Identities = 32/35 (91%) Strand = Plus / Plus Query: 294 caaattcaagagatcaaagaggcagtggaacttcc 328 ||||||||||| ||||||||| |||| |||||||| Sbjct: 635 caaattcaagaaatcaaagagtcagttgaacttcc 669
>ref|XM_721689.1| Plasmodium yoelii yoelii str. 17XNL 26S proteasome subunit 4 protein (PY00768) partial mRNA Length = 1344 Score = 46.1 bits (23), Expect = 0.090 Identities = 62/75 (82%) Strand = Plus / Plus Query: 209 agatgaagttgatcctatggtttctgtcatgaaagttgagaaggcacctttggagtctta 268 ||||||||||||||| | || ||||| ||||||||||| ||||| || | || || || Sbjct: 513 agatgaagttgatccgttagtatctgttatgaaagttgaaaaggctccactagaatcata 572 Query: 269 tgctgacattggtgg 283 |||||| |||||||| Sbjct: 573 tgctgatattggtgg 587
>ref|XM_667923.1| Plasmodium berghei strain ANKA 26S proteasome regulatory subunit 4 (PB000601.02.0) partial mRNA Length = 867 Score = 46.1 bits (23), Expect = 0.090 Identities = 62/75 (82%) Strand = Plus / Plus Query: 209 agatgaagttgatcctatggtttctgtcatgaaagttgagaaggcacctttggagtctta 268 ||||||||||||||| | || ||||| ||||||||||| ||||| || || || || || Sbjct: 495 agatgaagttgatccgttagtatctgttatgaaagttgaaaaggccccattagaatcata 554 Query: 269 tgctgacattggtgg 283 ||||| |||||||| Sbjct: 555 cgctgatattggtgg 569
>emb|Z29366.1|SPMTS2MR S.pombe(972) mts2 mRNA for 26S protease subunit Length = 1518 Score = 46.1 bits (23), Expect = 0.090 Identities = 23/23 (100%) Strand = Plus / Plus Query: 294 caaattcaagagatcaaagaggc 316 ||||||||||||||||||||||| Sbjct: 644 caaattcaagagatcaaagaggc 666
>emb|AL121863.1|SPBC4 S.pombe chromosome II cosmid c4 Length = 16037 Score = 46.1 bits (23), Expect = 0.090 Identities = 23/23 (100%) Strand = Plus / Minus Query: 294 caaattcaagagatcaaagaggc 316 ||||||||||||||||||||||| Sbjct: 14619 caaattcaagagatcaaagaggc 14597
>ref|NM_001021391.1| Schizosaccharomyces pombe 972h- 19S proteasome regulatory protein (SPBC4.07c), partial mRNA Length = 1347 Score = 46.1 bits (23), Expect = 0.090 Identities = 23/23 (100%) Strand = Plus / Plus Query: 294 caaattcaagagatcaaagaggc 316 ||||||||||||||||||||||| Sbjct: 595 caaattcaagagatcaaagaggc 617
>gb|AF309805.1|AF309805 Pneumocystis carinii f. sp. carinii glutathione synthetase Gsh1 (gsh1) gene, partial cds; putative a-factor pheromone receptor Ste3 (ste3) gene, complete cds, alternatively spliced; and Ydr124wp-like protein, helix-loop-helix DNA binding protein, Yer049wp-like protein, protein kinase Ste20 (ste20), putative sucrose carrier Sca1 (sca1), putative Na+/H+ exchanger Nhx1 (nhx1), putative 26S protease regulatory subunit 4 (mts2), hypothetical protein, glycyl tRNA synthetase, and coiled-coil protein genes, complete cds Length = 32083 Score = 46.1 bits (23), Expect = 0.090 Identities = 44/51 (86%) Strand = Plus / Plus Query: 294 caaattcaagagatcaaagaggcagtggaacttccgttgacacatcctgag 344 ||||||||||||||||||||| | || ||| | || || |||||||||||| Sbjct: 21385 caaattcaagagatcaaagagacggtagaattgccattaacacatcctgag 21435
>ref|XM_969766.1| PREDICTED: Tribolium castaneum similar to CG5289-PA (LOC663731), mRNA Length = 1377 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 126 tcgttcgtcgacaaggaccagctggagcc 154 ||||| || |||||||||||||||||||| Sbjct: 463 tcgtttgtggacaaggaccagctggagcc 491
>ref|XM_625714.1| Cryptosporidium parvum Iowa II 26S proteasome regulatory subunit S4 like AAA ATpase (cgd4_1170), partial mRNA Length = 1338 Score = 42.1 bits (21), Expect = 1.4 Identities = 45/53 (84%) Strand = Plus / Plus Query: 210 gatgaagttgatcctatggtttctgtcatgaaagttgagaaggcacctttgga 262 ||||| || |||||| | |||||||| ||||||||||| || || |||||||| Sbjct: 508 gatgaggtggatcctttagtttctgtaatgaaagttgataaagctcctttgga 560
>ref|XM_641634.1| Dictyostelium discoideum hypothetical protein (DDB0202018), partial mRNA Length = 1320 Score = 40.1 bits (20), Expect = 5.5 Identities = 71/88 (80%) Strand = Plus / Plus Query: 279 ggtggtttggatgcccaaattcaagagatcaaagaggcagtggaacttccgttgacacat 338 ||||||||||| || ||| |||||||||| ||||| || | ||| | || ||||| ||| Sbjct: 559 ggtggtttggaagcacaagttcaagagatgaaagaagccatcgaattgccattgactcat 618 Query: 339 cctgagctatacgaggacattgggatca 366 || ||||| || ||||| ||||| |||| Sbjct: 619 ccagagctctatgaggagattggtatca 646
>ref|XM_421449.1| PREDICTED: Gallus gallus similar to RIKEN cDNA D630024B06 (LOC423558), mRNA Length = 3956 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 220 atcctatggtttctgtcatg 239 |||||||||||||||||||| Sbjct: 3453 atcctatggtttctgtcatg 3472
>emb|BX017977.1|CNS08M19 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA27AF10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 950 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 136 acaaggaccagctggagccgggatgctc 163 |||||||||||||||| ||||| ||||| Sbjct: 950 acaaggaccagctggaaccgggctgctc 923
>emb|AJ010592.2|GTAJ10592 Guillardia theta DNA for complete sequence of nucleomorph chromosome 2 Length = 180915 Score = 40.1 bits (20), Expect = 5.5 Identities = 38/44 (86%) Strand = Plus / Minus Query: 369 cctccgaagggagtcatactatatggggaacctggaacagggaa 412 ||||| || ||||| ||| ||||||| ||||| ||||||||||| Sbjct: 100231 cctcctaaaggagtaatattatatggtgaaccaggaacagggaa 100188
>gb|AF016440.2| Caenorhabditis elegans cosmid F29G9, complete sequence Length = 42751 Score = 40.1 bits (20), Expect = 5.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 129 ttcgtcgacaaggaccagctggagccgggatg 160 |||||||||||||| || || ||||||||||| Sbjct: 16658 ttcgtcgacaaggaacaactcgagccgggatg 16627
>ref|NM_143700.3| Drosophila melanogaster CG17724-RA, transcript variant A (CG17724), mRNA Length = 3873 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 tcgaggagatcatcgacgag 71 |||||||||||||||||||| Sbjct: 2020 tcgaggagatcatcgacgag 2039
>ref|NM_079745.2| Drosophila melanogaster Proteasome 26S subunit subunit 4 ATPase CG5289-RA (Pros26.4), mRNA Length = 1631 Score = 40.1 bits (20), Expect = 5.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 54 gaggagatcatcgacgagagccacgcgatcgt 85 ||||||||||||||||| | |||||| ||||| Sbjct: 533 gaggagatcatcgacgacaaccacgccatcgt 564
>gb|AY070882.1| Drosophila melanogaster LD16673 full length cDNA Length = 3009 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 tcgaggagatcatcgacgag 71 |||||||||||||||||||| Sbjct: 1140 tcgaggagatcatcgacgag 1159
>gb|AC099026.1| Drosophila melanogaster, chromosome 2R, region 49F-50A, BAC clone BACR05M17, complete sequence Length = 182039 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 tcgaggagatcatcgacgag 71 |||||||||||||||||||| Sbjct: 175866 tcgaggagatcatcgacgag 175885
>gb|AY060442.1| Drosophila melanogaster LD47433 full length cDNA Length = 3433 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 tcgaggagatcatcgacgag 71 |||||||||||||||||||| Sbjct: 2020 tcgaggagatcatcgacgag 2039
>gb|AY058759.1| Drosophila melanogaster SD02658 full length cDNA Length = 1493 Score = 40.1 bits (20), Expect = 5.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 54 gaggagatcatcgacgagagccacgcgatcgt 85 ||||||||||||||||| | |||||| ||||| Sbjct: 417 gaggagatcatcgacgacaaccacgccatcgt 448
>ref|NM_072157.3| Caenorhabditis elegans F29G9.5 (ATPase) mRNA, complete cds Length = 1458 Score = 40.1 bits (20), Expect = 5.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 129 ttcgtcgacaaggaccagctggagccgggatg 160 |||||||||||||| || || ||||||||||| Sbjct: 422 ttcgtcgacaaggaacaactcgagccgggatg 453
>ref|NM_065299.2| Caenorhabditis elegans Myosin Light Chain family member (mlc-4) (mlc-4) mRNA, complete cds Length = 708 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 294 caaattcaagagatcaaagaggca 317 |||||||||||| ||||||||||| Sbjct: 95 caaattcaagagttcaaagaggca 118
>gb|AE006470.1| Chlorobium tepidum TLS, complete genome Length = 2154946 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 tcgaggagatcatcgacgag 71 |||||||||||||||||||| Sbjct: 1753756 tcgaggagatcatcgacgag 1753775
>gb|AC006247.12|AC006247 Drosophila melanogaster, chromosome 2R, region 49E6-49F8, BAC clone BACR48I10, complete sequence Length = 163162 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 tcgaggagatcatcgacgag 71 |||||||||||||||||||| Sbjct: 24120 tcgaggagatcatcgacgag 24139
>gb|AC007929.8|AC007929 Drosophila melanogaster, chromosome 3R, region 95A-95C, BAC clone BACR05C11, complete sequence Length = 171376 Score = 40.1 bits (20), Expect = 5.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 54 gaggagatcatcgacgagagccacgcgatcgt 85 ||||||||||||||||| | |||||| ||||| Sbjct: 96366 gaggagatcatcgacgacaaccacgccatcgt 96335
>gb|AC093915.2| Homo sapiens BAC clone RP11-785G17 from 2, complete sequence Length = 120416 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 ttggtggtttggatgcccaa 296 |||||||||||||||||||| Sbjct: 99531 ttggtggtttggatgcccaa 99550
>gb|AE003745.4| Drosophila melanogaster chromosome 3R, section 83 of 118 of the complete sequence Length = 230236 Score = 40.1 bits (20), Expect = 5.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 54 gaggagatcatcgacgagagccacgcgatcgt 85 ||||||||||||||||| | |||||| ||||| Sbjct: 129258 gaggagatcatcgacgacaaccacgccatcgt 129227
>gb|AE003819.3| Drosophila melanogaster chromosome 2R, section 31 of 73 of the complete sequence Length = 221945 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 tcgaggagatcatcgacgag 71 |||||||||||||||||||| Sbjct: 98327 tcgaggagatcatcgacgag 98308
>gb|AC005471.1|AC005471 Drosophila melanogaster, chromosome 2R, region 49F11-49F13, P1 clone DS01087, complete sequence Length = 50714 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 tcgaggagatcatcgacgag 71 |||||||||||||||||||| Sbjct: 37329 tcgaggagatcatcgacgag 37310
>gb|U39303.1|DMU39303 Drosophila melanogaster 26S proteasome subunit 4 ATPase mRNA, complete cds Length = 1497 Score = 40.1 bits (20), Expect = 5.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 54 gaggagatcatcgacgagagccacgcgatcgt 85 ||||||||||||||||| | |||||| ||||| Sbjct: 440 gaggagatcatcgacgacaaccacgccatcgt 471
>dbj|AP006428.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT04J15, TM0321, complete sequence Length = 127049 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 caagatgaagttgatcctat 226 |||||||||||||||||||| Sbjct: 51065 caagatgaagttgatcctat 51046 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,523,942 Number of Sequences: 3902068 Number of extensions: 2523942 Number of successful extensions: 44377 Number of sequences better than 10.0: 89 Number of HSP's better than 10.0 without gapping: 88 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 44174 Number of HSP's gapped (non-prelim): 193 length of query: 413 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 391 effective length of database: 17,147,199,772 effective search space: 6704555110852 effective search space used: 6704555110852 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)