| Clone Name | baal16e10 |
|---|---|
| Clone Library Name | barley_pub |
>FLII_HUMAN (Q13045) Protein flightless-1 homolog| Length = 1269 Score = 31.2 bits (69), Expect = 0.62 Identities = 28/95 (29%), Positives = 38/95 (40%), Gaps = 4/95 (4%) Frame = -2 Query: 361 HEQRTLLPAYPLAGALHLCSTEHKSAQLDVSFHAGSNLN----HGHRQVFVGDYPVLWPE 194 H Q LPA LHL ST+ + L S SNL + V + P Sbjct: 188 HAQLRQLPAMTALQTLHLRSTQRTQSNLPTSLEGLSNLADVDLSCNDLTRVPECLYTLPS 247 Query: 193 SEQLNLTHNRQVFVGDYPVLWPEPEQLNLTHNCIT 89 +LNL+ N+ + W E LNL+ N +T Sbjct: 248 LRRLNLSSNQITELSLCIDQWVHVETLNLSRNQLT 282
>FLII_MOUSE (Q9JJ28) Protein flightless-1 homolog| Length = 1271 Score = 30.4 bits (67), Expect = 1.1 Identities = 27/95 (28%), Positives = 39/95 (41%), Gaps = 4/95 (4%) Frame = -2 Query: 361 HEQRTLLPAYPLAGALHLCSTEHKSAQLDVSFHAGSNLN----HGHRQVFVGDYPVLWPE 194 H Q LPA LHL +T+ + L S SNL+ + V + P Sbjct: 188 HAQLRQLPAMMALQTLHLRNTQRTQSNLPTSLEGLSNLSDVDLSCNDLTRVPECLYTLPS 247 Query: 193 SEQLNLTHNRQVFVGDYPVLWPEPEQLNLTHNCIT 89 +LNL+ N+ + W E LNL+ N +T Sbjct: 248 LRRLNLSSNQIAELSLCIDQWVHLETLNLSRNQLT 282
>RS12_ERYGR (O59936) 40S ribosomal protein S12| Length = 132 Score = 29.6 bits (65), Expect = 1.8 Identities = 21/46 (45%), Positives = 25/46 (54%), Gaps = 2/46 (4%) Frame = +3 Query: 258 PA*KETSNWADLCSVLHRCSAPASGYAGKSVRCSCVVLQK--QESS 389 P K+ WA LC VL R G A K V CSCVV++ +ESS Sbjct: 80 PDGKQLGEWAGLC-VLDR-----EGNARKVVNCSCVVVKNWGEESS 119
>CP270_RAT (P19225) Cytochrome P450 2C70 (EC 1.14.14.1) (CYPIIC70) (P-450Md)| (P450 P49) Length = 489 Score = 29.3 bits (64), Expect = 2.4 Identities = 15/60 (25%), Positives = 28/60 (46%) Frame = +1 Query: 214 SLLQKLGDVHGSGSNQHERKHLIGLIYVLCYTDAVLRQADMLVKVCAVHVLCCKNRRVHM 393 +L+ +GD+ G+G+ GL+ +L Y + + + + +V H C R HM Sbjct: 285 NLIVTIGDLFGAGTETTSSTIKYGLLLLLKYPEVTAKIQEEITRVIGRHRRPCMQDRNHM 344
>ACE2_YEAST (P21192) Metallothionein expression activator| Length = 770 Score = 28.5 bits (62), Expect = 4.0 Identities = 23/76 (30%), Positives = 32/76 (42%) Frame = -2 Query: 259 GSNLNHGHRQVFVGDYPVLWPESEQLNLTHNRQVFVGDYPVLWPEPEQLNLTHNCITXXX 80 GS HRQ YP PES LNL + ++ D +L P+ NL + +T Sbjct: 302 GSPSRKYHRQ----RYPNKSPESNGLNLFSSNSGYLRDSELLSFSPQNYNLNLDGLTYND 357 Query: 79 XXXXXXXXSN*HENST 32 +N +NST Sbjct: 358 HNNTSDKNNNDKKNST 373
>NSD1_MOUSE (O88491) Histone-lysine N-methyltransferase, H3 lysine-36 and H4| lysine-20 specific (EC 2.1.1.43) (H3-K36-HMTase) (H4-K20-HMTase) (Nuclear receptor binding SET domain containing protein 1) (NR-binding SET domain containing protein) Length = 2588 Score = 28.5 bits (62), Expect = 4.0 Identities = 8/26 (30%), Positives = 15/26 (57%) Frame = +3 Query: 219 PTKTWRCPWFRFEPA*KETSNWADLC 296 P W CPW + + KE +++ ++C Sbjct: 2051 PAGKWECPWHQCDVCGKEAASFCEMC 2076
>NSD1_HUMAN (Q96L73) Histone-lysine N-methyltransferase, H3 lysine-36 and H4| lysine-20 specific (EC 2.1.1.43) (H3-K36-HMTase) (H4-K20-HMTase) (Nuclear receptor binding SET domain containing protein 1) (NR-binding SET domain containing protein) (Androgen r Length = 2696 Score = 28.1 bits (61), Expect = 5.3 Identities = 8/26 (30%), Positives = 15/26 (57%) Frame = +3 Query: 219 PTKTWRCPWFRFEPA*KETSNWADLC 296 P W CPW + + KE +++ ++C Sbjct: 2153 PAGKWECPWHQCDICGKEAASFCEMC 2178
>DFA4_ANASP (Q8YNW7) Putative diflavin flavoprotein A 4 (EC 1.-.-.-)| Length = 575 Score = 28.1 bits (61), Expect = 5.3 Identities = 18/54 (33%), Positives = 24/54 (44%) Frame = -2 Query: 355 QRTLLPAYPLAGALHLCSTEHKSAQLDVSFHAGSNLNHGHRQVFVGDYPVLWPE 194 Q TL+ + P A AL E +S V F +L GH+ FV WP+ Sbjct: 108 QATLICSRPAANALKTAFPEWESRIQAVRFEDILDLGQGHQLTFVTAPTPRWPD 161
>RF3_PHOLL (Q7MZN3) Peptide chain release factor 3 (RF-3)| Length = 529 Score = 27.3 bits (59), Expect = 9.0 Identities = 11/20 (55%), Positives = 13/20 (65%) Frame = +1 Query: 211 GSLLQKLGDVHGSGSNQHER 270 G +QK G V G GSNQH + Sbjct: 37 GQAIQKAGTVKGRGSNQHAK 56
>LUXR_VIBHA (P21308) HTH-type transcriptional regulator luxR| Length = 205 Score = 27.3 bits (59), Expect = 9.0 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 6/55 (10%) Frame = +1 Query: 244 GSGSNQHERKHLIGLIYVLCYTDAV-----LRQADMLVKVCA-VHVLCCKNRRVH 390 G +QHE +HL L + +CY+ V +A++ V A + +LC NR H Sbjct: 151 GEVCDQHEPEHLANLFHGICYSIFVQANRSKSEAELTNLVSAYLDMLCIYNREHH 205
>CHAO_TRICA (P82963) Chaoptin (Photoreceptor cell-specific membrane protein)| (Fragment) Length = 782 Score = 27.3 bits (59), Expect = 9.0 Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 6/86 (6%) Frame = -2 Query: 337 AYPLAGALHLCSTEHKSAQ----LDVSFHAGSNLNHGHRQVFVGDYPVLWPESEQLNLTH 170 ++ L G L L S SAQ LD+S+++ S+L+HG + + + L L+L++ Sbjct: 351 SHNLLGKLPLTSLSLASAQTLSELDLSWNSISSLSHGGQ---LARFKCL----SWLDLSY 403 Query: 169 NR--QVFVGDYPVLWPEPEQLNLTHN 98 NR Q+ G + + P LNL HN Sbjct: 404 NRLGQIDAGTFKGI-PRLASLNLGHN 428
>GNA14_MOUSE (P30677) Guanine nucleotide-binding protein alpha-14 subunit| Length = 355 Score = 27.3 bits (59), Expect = 9.0 Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 2/58 (3%) Frame = +1 Query: 214 SLLQKLGDVHGSGSNQHERKHLIGLIYVLCYT--DAVLRQADMLVKVCAVHVLCCKNR 381 + ++++ +HGSG + +RK L+Y +T A++R D L + +C +N+ Sbjct: 50 TFIKQMRIIHGSGYSDEDRKGFTKLVYQNIFTAMQAMIRAMDTL----RIQYMCEQNK 103 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 58,284,448 Number of Sequences: 219361 Number of extensions: 1177670 Number of successful extensions: 2596 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 2479 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2594 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 1365190992 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)