ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal16e10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1FLII_HUMAN (Q13045) Protein flightless-1 homolog 31 0.62
2FLII_MOUSE (Q9JJ28) Protein flightless-1 homolog 30 1.1
3RS12_ERYGR (O59936) 40S ribosomal protein S12 30 1.8
4CP270_RAT (P19225) Cytochrome P450 2C70 (EC 1.14.14.1) (CYPIIC70... 29 2.4
5ACE2_YEAST (P21192) Metallothionein expression activator 28 4.0
6NSD1_MOUSE (O88491) Histone-lysine N-methyltransferase, H3 lysin... 28 4.0
7NSD1_HUMAN (Q96L73) Histone-lysine N-methyltransferase, H3 lysin... 28 5.3
8DFA4_ANASP (Q8YNW7) Putative diflavin flavoprotein A 4 (EC 1.-.-.-) 28 5.3
9RF3_PHOLL (Q7MZN3) Peptide chain release factor 3 (RF-3) 27 9.0
10LUXR_VIBHA (P21308) HTH-type transcriptional regulator luxR 27 9.0
11CHAO_TRICA (P82963) Chaoptin (Photoreceptor cell-specific membra... 27 9.0
12GNA14_MOUSE (P30677) Guanine nucleotide-binding protein alpha-14... 27 9.0

>FLII_HUMAN (Q13045) Protein flightless-1 homolog|
          Length = 1269

 Score = 31.2 bits (69), Expect = 0.62
 Identities = 28/95 (29%), Positives = 38/95 (40%), Gaps = 4/95 (4%)
 Frame = -2

Query: 361 HEQRTLLPAYPLAGALHLCSTEHKSAQLDVSFHAGSNLN----HGHRQVFVGDYPVLWPE 194
           H Q   LPA      LHL ST+   + L  S    SNL       +    V +     P 
Sbjct: 188 HAQLRQLPAMTALQTLHLRSTQRTQSNLPTSLEGLSNLADVDLSCNDLTRVPECLYTLPS 247

Query: 193 SEQLNLTHNRQVFVGDYPVLWPEPEQLNLTHNCIT 89
             +LNL+ N+   +      W   E LNL+ N +T
Sbjct: 248 LRRLNLSSNQITELSLCIDQWVHVETLNLSRNQLT 282



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>FLII_MOUSE (Q9JJ28) Protein flightless-1 homolog|
          Length = 1271

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 27/95 (28%), Positives = 39/95 (41%), Gaps = 4/95 (4%)
 Frame = -2

Query: 361 HEQRTLLPAYPLAGALHLCSTEHKSAQLDVSFHAGSNLN----HGHRQVFVGDYPVLWPE 194
           H Q   LPA      LHL +T+   + L  S    SNL+      +    V +     P 
Sbjct: 188 HAQLRQLPAMMALQTLHLRNTQRTQSNLPTSLEGLSNLSDVDLSCNDLTRVPECLYTLPS 247

Query: 193 SEQLNLTHNRQVFVGDYPVLWPEPEQLNLTHNCIT 89
             +LNL+ N+   +      W   E LNL+ N +T
Sbjct: 248 LRRLNLSSNQIAELSLCIDQWVHLETLNLSRNQLT 282



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>RS12_ERYGR (O59936) 40S ribosomal protein S12|
          Length = 132

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 21/46 (45%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
 Frame = +3

Query: 258 PA*KETSNWADLCSVLHRCSAPASGYAGKSVRCSCVVLQK--QESS 389
           P  K+   WA LC VL R      G A K V CSCVV++   +ESS
Sbjct: 80  PDGKQLGEWAGLC-VLDR-----EGNARKVVNCSCVVVKNWGEESS 119



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>CP270_RAT (P19225) Cytochrome P450 2C70 (EC 1.14.14.1) (CYPIIC70) (P-450Md)|
           (P450 P49)
          Length = 489

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 15/60 (25%), Positives = 28/60 (46%)
 Frame = +1

Query: 214 SLLQKLGDVHGSGSNQHERKHLIGLIYVLCYTDAVLRQADMLVKVCAVHVLCCKNRRVHM 393
           +L+  +GD+ G+G+         GL+ +L Y +   +  + + +V   H   C   R HM
Sbjct: 285 NLIVTIGDLFGAGTETTSSTIKYGLLLLLKYPEVTAKIQEEITRVIGRHRRPCMQDRNHM 344



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>ACE2_YEAST (P21192) Metallothionein expression activator|
          Length = 770

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 23/76 (30%), Positives = 32/76 (42%)
 Frame = -2

Query: 259 GSNLNHGHRQVFVGDYPVLWPESEQLNLTHNRQVFVGDYPVLWPEPEQLNLTHNCITXXX 80
           GS     HRQ     YP   PES  LNL  +   ++ D  +L   P+  NL  + +T   
Sbjct: 302 GSPSRKYHRQ----RYPNKSPESNGLNLFSSNSGYLRDSELLSFSPQNYNLNLDGLTYND 357

Query: 79  XXXXXXXXSN*HENST 32
                   +N  +NST
Sbjct: 358 HNNTSDKNNNDKKNST 373



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>NSD1_MOUSE (O88491) Histone-lysine N-methyltransferase, H3 lysine-36 and H4|
            lysine-20 specific (EC 2.1.1.43) (H3-K36-HMTase)
            (H4-K20-HMTase) (Nuclear receptor binding SET domain
            containing protein 1) (NR-binding SET domain containing
            protein)
          Length = 2588

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = +3

Query: 219  PTKTWRCPWFRFEPA*KETSNWADLC 296
            P   W CPW + +   KE +++ ++C
Sbjct: 2051 PAGKWECPWHQCDVCGKEAASFCEMC 2076



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>NSD1_HUMAN (Q96L73) Histone-lysine N-methyltransferase, H3 lysine-36 and H4|
            lysine-20 specific (EC 2.1.1.43) (H3-K36-HMTase)
            (H4-K20-HMTase) (Nuclear receptor binding SET domain
            containing protein 1) (NR-binding SET domain containing
            protein) (Androgen r
          Length = 2696

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = +3

Query: 219  PTKTWRCPWFRFEPA*KETSNWADLC 296
            P   W CPW + +   KE +++ ++C
Sbjct: 2153 PAGKWECPWHQCDICGKEAASFCEMC 2178



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>DFA4_ANASP (Q8YNW7) Putative diflavin flavoprotein A 4 (EC 1.-.-.-)|
          Length = 575

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 18/54 (33%), Positives = 24/54 (44%)
 Frame = -2

Query: 355 QRTLLPAYPLAGALHLCSTEHKSAQLDVSFHAGSNLNHGHRQVFVGDYPVLWPE 194
           Q TL+ + P A AL     E +S    V F    +L  GH+  FV      WP+
Sbjct: 108 QATLICSRPAANALKTAFPEWESRIQAVRFEDILDLGQGHQLTFVTAPTPRWPD 161



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>RF3_PHOLL (Q7MZN3) Peptide chain release factor 3 (RF-3)|
          Length = 529

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +1

Query: 211 GSLLQKLGDVHGSGSNQHER 270
           G  +QK G V G GSNQH +
Sbjct: 37  GQAIQKAGTVKGRGSNQHAK 56



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>LUXR_VIBHA (P21308) HTH-type transcriptional regulator luxR|
          Length = 205

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 6/55 (10%)
 Frame = +1

Query: 244 GSGSNQHERKHLIGLIYVLCYTDAV-----LRQADMLVKVCA-VHVLCCKNRRVH 390
           G   +QHE +HL  L + +CY+  V       +A++   V A + +LC  NR  H
Sbjct: 151 GEVCDQHEPEHLANLFHGICYSIFVQANRSKSEAELTNLVSAYLDMLCIYNREHH 205



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>CHAO_TRICA (P82963) Chaoptin (Photoreceptor cell-specific membrane protein)|
           (Fragment)
          Length = 782

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
 Frame = -2

Query: 337 AYPLAGALHLCSTEHKSAQ----LDVSFHAGSNLNHGHRQVFVGDYPVLWPESEQLNLTH 170
           ++ L G L L S    SAQ    LD+S+++ S+L+HG +   +  +  L      L+L++
Sbjct: 351 SHNLLGKLPLTSLSLASAQTLSELDLSWNSISSLSHGGQ---LARFKCL----SWLDLSY 403

Query: 169 NR--QVFVGDYPVLWPEPEQLNLTHN 98
           NR  Q+  G +  + P    LNL HN
Sbjct: 404 NRLGQIDAGTFKGI-PRLASLNLGHN 428



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>GNA14_MOUSE (P30677) Guanine nucleotide-binding protein alpha-14 subunit|
          Length = 355

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
 Frame = +1

Query: 214 SLLQKLGDVHGSGSNQHERKHLIGLIYVLCYT--DAVLRQADMLVKVCAVHVLCCKNR 381
           + ++++  +HGSG +  +RK    L+Y   +T   A++R  D L     +  +C +N+
Sbjct: 50  TFIKQMRIIHGSGYSDEDRKGFTKLVYQNIFTAMQAMIRAMDTL----RIQYMCEQNK 103


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,284,448
Number of Sequences: 219361
Number of extensions: 1177670
Number of successful extensions: 2596
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2479
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2594
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 1365190992
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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