>gb|AC114537.6| Mus musculus chromosome 15, clone RP23-51A16, complete sequence
          Length = 189760

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 166   gattgtgtgtaagatttaatt 186
             |||||||||||||||||||||
Sbjct: 71277 gattgtgtgtaagatttaatt 71257



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 98    attgtgtgtaagatttaatt 117
             ||||||||||||||||||||
Sbjct: 71276 attgtgtgtaagatttaatt 71257

>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 183  aattgttcagattcaggccag 203
            |||||||||||||||||||||
Sbjct: 9001 aattgttcagattcaggccag 8981



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 5    attgttcagattcaggccag 24
            ||||||||||||||||||||
Sbjct: 9000 attgttcagattcaggccag 8981

>emb|AL589870.30| Mouse DNA sequence from clone RP23-118A2 on chromosome 2, complete
            sequence
          Length = 202686

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 269  ggaaacatctaattgggctgattta 293
            |||||||| ||||||||||||||||
Sbjct: 9463 ggaaacatttaattgggctgattta 9487

>gb|AC138300.8| Mus musculus chromosome 14, clone RP23-187B20, complete sequence
          Length = 213955

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 186   tgttcagattcaggccagag 205
             ||||||||||||||||||||
Sbjct: 81755 tgttcagattcaggccagag 81774

>gb|AC101980.8| Mus musculus chromosome 7, clone RP24-339E15, complete sequence
          Length = 219739

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 285    gctgatttatgttctgtgct 304
              ||||||||||||||||||||
Sbjct: 165684 gctgatttatgttctgtgct 165665

>emb|AL365193.12| Human DNA sequence from clone RP3-526N11 on chromosome 6 Contains the
             3' end of variants of the EPM2A gene for progressive
             myoclonus type 2 epilepsy (Lafora disease) protein
             (laforin), complete sequence
          Length = 51887

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 79    ttccatcttatgttatgcaa 98
             ||||||||||||||||||||
Sbjct: 51848 ttccatcttatgttatgcaa 51867

>emb|AL023806.1|HS466P17 Human DNA sequence from clone RP3-466P17 on chromosome 6q24 Contains the
              5' end of the EPM2A gene for progressive myoclonus type 2
              epilepsy (Lafora disease) protein (laforin) and a CpG
              island, complete sequence
          Length = 149963

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 79     ttccatcttatgttatgcaa 98
              ||||||||||||||||||||
Sbjct: 149900 ttccatcttatgttatgcaa 149881

>gb|AC147927.3| Ovis aries clone CH243-129I22, complete sequence
          Length = 187152

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 94    tgcaattgtgtgtaagatttaattgttcaggt 125
             ||||||||  |||| |||||||||||||||||
Sbjct: 69328 tgcaattgcatgtatgatttaattgttcaggt 69297

>gb|AF172633.1|AF172628S6 Mus musculus gibbon ape leukemia virus receptor (Slc20a1) gene,
           exon 9
          Length = 555

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 229 cttggcgatgtccatggttcaggt 252
           ||||| ||||||||||||||||||
Sbjct: 368 cttggggatgtccatggttcaggt 391

>emb|AL772347.6| Mouse DNA sequence from clone RP23-160G19 on chromosome 2, complete
             sequence
          Length = 184583

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 229   cttggcgatgtccatggttcaggt 252
             ||||| ||||||||||||||||||
Sbjct: 40899 cttggggatgtccatggttcaggt 40922


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,437,733
Number of Sequences: 3902068
Number of extensions: 3437733
Number of successful extensions: 65725
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 65683
Number of HSP's gapped (non-prelim): 42
length of query: 398
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 376
effective length of database: 17,147,199,772
effective search space: 6447347114272
effective search space used: 6447347114272
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)