ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal16e02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 168 8e-39
2dbj|AP004117.3| Oryza sativa (japonica cultivar-group) genomic D... 168 8e-39
3dbj|AK119770.1| Oryza sativa (japonica cultivar-group) cDNA clon... 168 8e-39
4dbj|AK119874.1| Oryza sativa (japonica cultivar-group) cDNA clon... 168 8e-39
5gb|AC141922.19| Medicago truncatula clone mth2-9n11, complete se... 115 1e-22
6gb|AC170800.5| Medicago truncatula clone mth2-32n7, complete seq... 115 1e-22
7ref|NM_101332.3| Arabidopsis thaliana RNA binding AT1G14650 mRNA... 68 2e-08
8gb|AY081293.1| Arabidopsis thaliana splicing factor, putative (A... 68 2e-08
9gb|AC010657.3|AC010657 Genomic sequence for Arabidopsis thaliana... 68 2e-08
10gb|AC004687.1|AC004687 Homo sapiens chromosome 17, clone hRPC.11... 44 0.31
11dbj|AP006352.1| Lotus japonicus genomic DNA, chromosome 2, clone... 44 0.31
12ref|NM_101331.1| Arabidopsis thaliana RNA binding AT1G14640 mRNA... 42 1.2
13gb|AC092710.6| Mus musculus chromosome 13, clone RP23-5A19, comp... 42 1.2
14gb|AC138022.14| Botryllus schlosseri clone subsf-533i14, complet... 42 1.2
15gb|AC026789.5| Homo sapiens chromosome 5 clone CTD-2219P2, compl... 42 1.2
16gb|AC026727.6| Homo sapiens chromosome 5 clone CTD-2258D6, compl... 42 1.2
17gb|AC010226.5|AC010226 Homo sapiens chromosome 5 clone CTC-286N1... 42 1.2
18gb|AC133106.3| Homo sapiens BAC clone RP11-634B17 from 2, comple... 42 1.2
19dbj|BS000207.2| Pan troglodytes chromosome 22 clone:PTB-155J22, ... 42 1.2
20emb|AL032627.2|CEY41C4A Caenorhabditis elegans YAC Y41C4A, compl... 42 1.2
21gb|AC110180.10| Mus musculus chromosome 19, clone RP24-358B11, c... 40 4.9
22ref|XM_453971.1| Kluyveromyces lactis NRRL Y-1140, KLLA0E00484g ... 40 4.9
23gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 4.9
24gb|AY363103.1|AY363102S2 Mus musculus diadenosine triphosphate h... 40 4.9
25gb|AC117202.2| Mus musculus BAC clone RP23-248L5 from 14, comple... 40 4.9
26gb|AC102431.7| Mus musculus chromosome 14, clone RP24-106J1, com... 40 4.9
27emb|AL353795.13| Human DNA sequence from clone RP11-182N22 on ch... 40 4.9
28emb|AL354669.12| Human DNA sequence from clone RP11-201P13 on ch... 40 4.9
29emb|CR450800.9| Zebrafish DNA sequence from clone DKEY-83F4 in l... 40 4.9
30emb|CR382125.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso... 40 4.9
31emb|AL607083.17| Mouse DNA sequence from clone RP23-206E3 on chr... 40 4.9
32gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 40 4.9
33emb|CR318657.8| Zebrafish DNA sequence from clone DKEY-114G7 in ... 40 4.9
34gb|AC139854.21| Medicago truncatula clone mth2-16e16, complete s... 40 4.9
35gb|AC150442.2| Medicago truncatula chromosome 7 BAC clone mth2-2... 40 4.9
36dbj|AK034134.1| Mus musculus adult male diencephalon cDNA, RIKEN... 40 4.9
37dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.9
38gb|AC108906.9| Oryza sativa chromosome 3 BAC OSJNBa0087C10 genom... 40 4.9
39gb|AC084506.1|CBRG15A11 Caenorhabditis briggsae cosmid G15A11, c... 40 4.9
40emb|BX000522.11| Zebrafish DNA sequence from clone CH211-146K11,... 40 4.9
41emb|AL929103.7| Zebrafish DNA sequence from clone CH211-122O8, c... 40 4.9
42emb|AL928703.9| Mouse DNA sequence from clone RP23-308K19 on chr... 40 4.9
43emb|CR388128.18| Zebrafish DNA sequence from clone CH211-127B17 ... 40 4.9
44dbj|AP004933.1| Lotus japonicus genomic DNA, chromosome 1, clone... 40 4.9

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  168 bits (85), Expect = 8e-39
 Identities = 163/189 (86%)
 Strand = Plus / Plus

                                                                           
Query: 9       ggtctcgcacgtactaggccagatatttttggaaccaccgaggaagaggtttctaatgcc 68
               ||||| || ||||| |||||||| || |||||||| || ||||||||||| |||||||| 
Sbjct: 8197553 ggtcttgcccgtaccaggccagacatctttggaacaacagaggaagaggtctctaatgct 8197612

                                                                           
Query: 69      gtcaaggcagaaattgaaaagaaaaaggatgagcagccaaagcaggttatttgggatggt 128
               ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| 
Sbjct: 8197613 gtcaaggcagaaattgagaagaaaaaggatgaacagccaaagcaggttatttgggatggc 8197672

                                                                           
Query: 129     cactctgggagcatcggttggacagccacccaggcaatgtctatcggtggagaagaacag 188
               || ||||| ||||| ||| | || ||||| |||||  ||||||| || || || ||||||
Sbjct: 8197673 cattctggtagcataggtcgtactgccacacaggctctgtctatgggcggcgaggaacag 8197732

                        
Query: 189     ggtgatgct 197
               | |||||||
Sbjct: 8197733 gttgatgct 8197741



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>dbj|AP004117.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1134_F06
          Length = 130968

 Score =  168 bits (85), Expect = 8e-39
 Identities = 163/189 (86%)
 Strand = Plus / Plus

                                                                         
Query: 9     ggtctcgcacgtactaggccagatatttttggaaccaccgaggaagaggtttctaatgcc 68
             ||||| || ||||| |||||||| || |||||||| || ||||||||||| |||||||| 
Sbjct: 29699 ggtcttgcccgtaccaggccagacatctttggaacaacagaggaagaggtctctaatgct 29758

                                                                         
Query: 69    gtcaaggcagaaattgaaaagaaaaaggatgagcagccaaagcaggttatttgggatggt 128
             ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| 
Sbjct: 29759 gtcaaggcagaaattgagaagaaaaaggatgaacagccaaagcaggttatttgggatggc 29818

                                                                         
Query: 129   cactctgggagcatcggttggacagccacccaggcaatgtctatcggtggagaagaacag 188
             || ||||| ||||| ||| | || ||||| |||||  ||||||| || || || ||||||
Sbjct: 29819 cattctggtagcataggtcgtactgccacacaggctctgtctatgggcggcgaggaacag 29878

                      
Query: 189   ggtgatgct 197
             | |||||||
Sbjct: 29879 gttgatgct 29887



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>dbj|AK119770.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-172-F01, full
            insert sequence
          Length = 2370

 Score =  168 bits (85), Expect = 8e-39
 Identities = 163/189 (86%)
 Strand = Plus / Plus

                                                                        
Query: 9    ggtctcgcacgtactaggccagatatttttggaaccaccgaggaagaggtttctaatgcc 68
            ||||| || ||||| |||||||| || |||||||| || ||||||||||| |||||||| 
Sbjct: 1238 ggtcttgcccgtaccaggccagacatctttggaacaacagaggaagaggtctctaatgct 1297

                                                                        
Query: 69   gtcaaggcagaaattgaaaagaaaaaggatgagcagccaaagcaggttatttgggatggt 128
            ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| 
Sbjct: 1298 gtcaaggcagaaattgagaagaaaaaggatgaacagccaaagcaggttatttgggatggc 1357

                                                                        
Query: 129  cactctgggagcatcggttggacagccacccaggcaatgtctatcggtggagaagaacag 188
            || ||||| ||||| ||| | || ||||| |||||  ||||||| || || || ||||||
Sbjct: 1358 cattctggtagcataggtcgtactgccacacaggctctgtctatgggcggcgaggaacag 1417

                     
Query: 189  ggtgatgct 197
            | |||||||
Sbjct: 1418 gttgatgct 1426



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>dbj|AK119874.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-179-E06, full
            insert sequence
          Length = 2578

 Score =  168 bits (85), Expect = 8e-39
 Identities = 163/189 (86%)
 Strand = Plus / Plus

                                                                        
Query: 9    ggtctcgcacgtactaggccagatatttttggaaccaccgaggaagaggtttctaatgcc 68
            ||||| || ||||| |||||||| || |||||||| || ||||||||||| |||||||| 
Sbjct: 1438 ggtcttgcccgtaccaggccagacatctttggaacaacagaggaagaggtctctaatgct 1497

                                                                        
Query: 69   gtcaaggcagaaattgaaaagaaaaaggatgagcagccaaagcaggttatttgggatggt 128
            ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| 
Sbjct: 1498 gtcaaggcagaaattgagaagaaaaaggatgaacagccaaagcaggttatttgggatggc 1557

                                                                        
Query: 129  cactctgggagcatcggttggacagccacccaggcaatgtctatcggtggagaagaacag 188
            || ||||| ||||| ||| | || ||||| |||||  ||||||| || || || ||||||
Sbjct: 1558 cattctggtagcataggtcgtactgccacacaggctctgtctatgggcggcgaggaacag 1617

                     
Query: 189  ggtgatgct 197
            | |||||||
Sbjct: 1618 gttgatgct 1626



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>gb|AC141922.19| Medicago truncatula clone mth2-9n11, complete sequence
          Length = 107448

 Score =  115 bits (58), Expect = 1e-22
 Identities = 91/102 (89%)
 Strand = Plus / Minus

                                                                         
Query: 30    gatatttttggaaccaccgaggaagaggtttctaatgccgtcaaggcagaaattgaaaag 89
             ||||||||||| || ||||||||||||||||| ||||| || ||||| |||||||| |||
Sbjct: 27626 gatatttttggtactaccgaggaagaggtttccaatgctgttaaggctgaaattgagaag 27567

                                                       
Query: 90    aaaaaggatgagcagccaaagcaggttatttgggatggtcac 131
             ||||| |||||||| || ||||||||||| ||||||||||||
Sbjct: 27566 aaaaatgatgagcaacctaagcaggttatatgggatggtcac 27525



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>gb|AC170800.5| Medicago truncatula clone mth2-32n7, complete sequence
          Length = 99712

 Score =  115 bits (58), Expect = 1e-22
 Identities = 91/102 (89%)
 Strand = Plus / Minus

                                                                         
Query: 30    gatatttttggaaccaccgaggaagaggtttctaatgccgtcaaggcagaaattgaaaag 89
             ||||||||||| || ||||||||||||||||| ||||| || ||||| |||||||| |||
Sbjct: 17143 gatatttttggtactaccgaggaagaggtttccaatgctgttaaggctgaaattgagaag 17084

                                                       
Query: 90    aaaaaggatgagcagccaaagcaggttatttgggatggtcac 131
             ||||| |||||||| || ||||||||||| ||||||||||||
Sbjct: 17083 aaaaatgatgagcaacctaagcaggttatatgggatggtcac 17042



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>ref|NM_101332.3| Arabidopsis thaliana RNA binding AT1G14650 mRNA, complete cds
          Length = 2789

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 85/102 (83%)
 Strand = Plus / Plus

                                                                        
Query: 30   gatatttttggaaccaccgaggaagaggtttctaatgccgtcaaggcagaaattgaaaag 89
            ||||| |||||||| ||||| ||||| || || ||||| || || ||||| ||||| |||
Sbjct: 1579 gatatctttggaacaaccgaagaagaagtctcaaatgctgtaaaagcagagattgagaag 1638

                                                      
Query: 90   aaaaaggatgagcagccaaagcaggttatttgggatggtcac 131
            || || ||||||||||| ||||| || || ||||||||||||
Sbjct: 1639 aagaaagatgagcagcccaagcaagtgatatgggatggtcac 1680



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>gb|AY081293.1| Arabidopsis thaliana splicing factor, putative (At1g14650) mRNA,
            complete cds
          Length = 2740

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 85/102 (83%)
 Strand = Plus / Plus

                                                                        
Query: 30   gatatttttggaaccaccgaggaagaggtttctaatgccgtcaaggcagaaattgaaaag 89
            ||||| |||||||| ||||| ||||| || || ||||| || || ||||| ||||| |||
Sbjct: 1544 gatatctttggaacaaccgaagaagaagtctcaaatgctgtaaaagcagagattgagaag 1603

                                                      
Query: 90   aaaaaggatgagcagccaaagcaggttatttgggatggtcac 131
            || || ||||||||||| ||||| || || ||||||||||||
Sbjct: 1604 aagaaagatgagcagcccaagcaagtgatatgggatggtcac 1645



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>gb|AC010657.3|AC010657 Genomic sequence for Arabidopsis thaliana BAC T5E21 from chromosome I,
             complete sequence
          Length = 83351

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 85/102 (83%)
 Strand = Plus / Plus

                                                                         
Query: 30    gatatttttggaaccaccgaggaagaggtttctaatgccgtcaaggcagaaattgaaaag 89
             ||||| |||||||| ||||| ||||| || || ||||| || || ||||| ||||| |||
Sbjct: 66968 gatatctttggaacaaccgaagaagaagtctcaaatgctgtaaaagcagagattgagaag 67027

                                                       
Query: 90    aaaaaggatgagcagccaaagcaggttatttgggatggtcac 131
             || || ||||||||||| ||||| || || ||||||||||||
Sbjct: 67028 aagaaagatgagcagcccaagcaagtgatatgggatggtcac 67069



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 86/107 (80%), Gaps = 3/107 (2%)
 Strand = Plus / Plus

                                                                         
Query: 30    gatatttttggaaccaccgaggaagaggtttctaatgccgtcaaggcagaaattgaaaag 89
             ||||| |||||||| || || ||||| ||||| ||||| || || ||||| |||||   |
Sbjct: 62517 gatatctttggaacaacagaagaagaagtttcaaatgctgtaaaagcagatattga---g 62573

                                                            
Query: 90    aaaaaggatgagcagccaaagcaggttatttgggatggtcactctgg 136
             ||||| |||||||| || || || || || |||||||||||| ||||
Sbjct: 62574 aaaaaagatgagcaaccgaaacaagtaatatgggatggtcacactgg 62620



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>gb|AC004687.1|AC004687 Homo sapiens chromosome 17, clone hRPC.1171_I_10, complete sequence
          Length = 175120

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 174   ggtggagaagaacagggtgatg 195
             ||||||||||||||||||||||
Sbjct: 91469 ggtggagaagaacagggtgatg 91490



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>dbj|AP006352.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT40O04, TM0348,
              complete sequence
          Length = 105070

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 77     agaaattgaaaagaaaaaggat 98
              ||||||||||||||||||||||
Sbjct: 101676 agaaattgaaaagaaaaaggat 101697



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>ref|NM_101331.1| Arabidopsis thaliana RNA binding AT1G14640 mRNA, complete cds
          Length = 2208

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 86/107 (80%), Gaps = 3/107 (2%)
 Strand = Plus / Plus

                                                                        
Query: 30   gatatttttggaaccaccgaggaagaggtttctaatgccgtcaaggcagaaattgaaaag 89
            ||||| |||||||| || || ||||| ||||| ||||| || || ||||| |||||   |
Sbjct: 1390 gatatctttggaacaacagaagaagaagtttcaaatgctgtaaaagcagatattga---g 1446

                                                           
Query: 90   aaaaaggatgagcagccaaagcaggttatttgggatggtcactctgg 136
            ||||| |||||||| || || || || || |||||||||||| ||||
Sbjct: 1447 aaaaaagatgagcaaccgaaacaagtaatatgggatggtcacactgg 1493



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>gb|AC092710.6| Mus musculus chromosome 13, clone RP23-5A19, complete sequence
          Length = 268129

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 254    actttccttggtcaatgttcc 274
              |||||||||||||||||||||
Sbjct: 142534 actttccttggtcaatgttcc 142514



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>gb|AC138022.14| Botryllus schlosseri clone subsf-533i14, complete sequence
          Length = 44370

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 18    cgtactaggccagatattttt 38
             |||||||||||||||||||||
Sbjct: 34620 cgtactaggccagatattttt 34600



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>gb|AC026789.5| Homo sapiens chromosome 5 clone CTD-2219P2, complete sequence
          Length = 176072

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 95    ggatgagcagccaaagcaggt 115
             |||||||||||||||||||||
Sbjct: 44300 ggatgagcagccaaagcaggt 44280



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>gb|AC026727.6| Homo sapiens chromosome 5 clone CTD-2258D6, complete sequence
          Length = 176072

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 95    ggatgagcagccaaagcaggt 115
             |||||||||||||||||||||
Sbjct: 44300 ggatgagcagccaaagcaggt 44280



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>gb|AC010226.5|AC010226 Homo sapiens chromosome 5 clone CTC-286N18, complete sequence
          Length = 147140

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 95    ggatgagcagccaaagcaggt 115
             |||||||||||||||||||||
Sbjct: 21187 ggatgagcagccaaagcaggt 21207



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>gb|AC133106.3| Homo sapiens BAC clone RP11-634B17 from 2, complete sequence
          Length = 109568

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 83   tgaaaagaaaaaggatgagca 103
            |||||||||||||||||||||
Sbjct: 5614 tgaaaagaaaaaggatgagca 5594



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>dbj|BS000207.2| Pan troglodytes chromosome 22 clone:PTB-155J22, map 22, complete
              sequences
          Length = 193476

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 95     ggatgagcagccaaagcaggt 115
              |||||||||||||||||||||
Sbjct: 101956 ggatgagcagccaaagcaggt 101976



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>emb|AL032627.2|CEY41C4A Caenorhabditis elegans YAC Y41C4A, complete sequence
          Length = 129061

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 79    aaattgaaaagaaaaaggatgagca 103
             |||||||||| ||||||||||||||
Sbjct: 48139 aaattgaaaataaaaaggatgagca 48163



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>gb|AC110180.10| Mus musculus chromosome 19, clone RP24-358B11, complete sequence
          Length = 144511

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 77    agaaattgaaaagaaaaagg 96
             ||||||||||||||||||||
Sbjct: 50969 agaaattgaaaagaaaaagg 50988



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>ref|XM_453971.1| Kluyveromyces lactis NRRL Y-1140, KLLA0E00484g predicted mRNA
          Length = 729

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 34  tttttggaaccaccgaggaa 53
           ||||||||||||||||||||
Sbjct: 461 tttttggaaccaccgaggaa 480



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 77       agaaattgaaaagaaaaagg 96
                ||||||||||||||||||||
Sbjct: 33215250 agaaattgaaaagaaaaagg 33215231



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>gb|AY363103.1|AY363102S2 Mus musculus diadenosine triphosphate hydrolase (Fhit) gene, exons 6
              through 10 and partial cds
          Length = 688489

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 73     aggcagaaattgaaaagaaa 92
              ||||||||||||||||||||
Sbjct: 286622 aggcagaaattgaaaagaaa 286641



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>gb|AC117202.2| Mus musculus BAC clone RP23-248L5 from 14, complete sequence
          Length = 209508

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 77    agaaattgaaaagaaaaagg 96
             ||||||||||||||||||||
Sbjct: 37419 agaaattgaaaagaaaaagg 37438



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>gb|AC102431.7| Mus musculus chromosome 14, clone RP24-106J1, complete sequence
          Length = 157923

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 73    aggcagaaattgaaaagaaa 92
             ||||||||||||||||||||
Sbjct: 24387 aggcagaaattgaaaagaaa 24368



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>emb|AL353795.13| Human DNA sequence from clone RP11-182N22 on chromosome 9 Contains a
              novel gene, the VCP gene for valosin-containing protein,
              the FANCG gene for Fanconi anemia, complementation group G
              (FAG, XRCC9), the gene for phosphatidylinositol glycan
              class O (PIGO), a novel gene, the STOML2 gene for stomatin
              (EPB72)-like 2 (SLP-2), a novel gene (KIAA1539) (FLJ11560),
              a zinc finger protein pseudogene, the 5' end of the UNC13
              gene for unc-13-like (C. elegans) (hmunc13) and nine CpG
              islands, complete sequence
          Length = 195102

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 95     ggatgagcagccaaagcagg 114
              ||||||||||||||||||||
Sbjct: 125494 ggatgagcagccaaagcagg 125513



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>emb|AL354669.12| Human DNA sequence from clone RP11-201P13 on chromosome 9p13.1-21.1
            Contains the 5' end of the UNC13 gene for unc-13-like (C.
            elegans)(MUNC13,hmunc13), complete sequence
          Length = 142602

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 95   ggatgagcagccaaagcagg 114
            ||||||||||||||||||||
Sbjct: 2301 ggatgagcagccaaagcagg 2320



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>emb|CR450800.9| Zebrafish DNA sequence from clone DKEY-83F4 in linkage group 8,
             complete sequence
          Length = 120875

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 344   atatgatgtccaatatgcat 363
             ||||||||||||||||||||
Sbjct: 94133 atatgatgtccaatatgcat 94114



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>emb|CR382125.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome E of strain NRRL
             Y-1140 of Kluyveromyces lactis
          Length = 2234072

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 34    tttttggaaccaccgaggaa 53
             ||||||||||||||||||||
Sbjct: 46023 tttttggaaccaccgaggaa 46004



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>emb|AL607083.17| Mouse DNA sequence from clone RP23-206E3 on chromosome 11 Contains a
             novel gene, complete sequence
          Length = 189495

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 76    cagaaattgaaaagaaaaag 95
             ||||||||||||||||||||
Sbjct: 22426 cagaaattgaaaagaaaaag 22445



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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 198     ccaggtccagctccacttcc 217
               ||||||||||||||||||||
Sbjct: 5635284 ccaggtccagctccacttcc 5635265



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>emb|CR318657.8| Zebrafish DNA sequence from clone DKEY-114G7 in linkage group 20,
             complete sequence
          Length = 151250

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 78    gaaattgaaaagaaaaagga 97
             ||||||||||||||||||||
Sbjct: 20112 gaaattgaaaagaaaaagga 20093



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>gb|AC139854.21| Medicago truncatula clone mth2-16e16, complete sequence
          Length = 117864

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 171    atcggtggagaagaacaggg 190
              ||||||||||||||||||||
Sbjct: 114353 atcggtggagaagaacaggg 114334



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>gb|AC150442.2| Medicago truncatula chromosome 7 BAC clone mth2-2o12, complete sequence
          Length = 89504

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 171   atcggtggagaagaacaggg 190
             ||||||||||||||||||||
Sbjct: 14114 atcggtggagaagaacaggg 14095



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>dbj|AK034134.1| Mus musculus adult male diencephalon cDNA, RIKEN full-length
          enriched library, clone:9330158P05
          product:unclassifiable, full insert sequence
          Length = 2797

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 78 gaaattgaaaagaaaaagga 97
          ||||||||||||||||||||
Sbjct: 65 gaaattgaaaagaaaaagga 46



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 77       agaaattgaaaagaaaaagg 96
                ||||||||||||||||||||
Sbjct: 33305760 agaaattgaaaagaaaaagg 33305741



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>gb|AC108906.9| Oryza sativa chromosome 3 BAC OSJNBa0087C10 genomic sequence, complete
             sequence
          Length = 144487

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 77    agaaattgaaaagaaaaagg 96
             ||||||||||||||||||||
Sbjct: 29305 agaaattgaaaagaaaaagg 29324



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>gb|AC084506.1|CBRG15A11 Caenorhabditis briggsae cosmid G15A11, complete sequence
          Length = 42688

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 72   aaggcagaaattgaaaagaaaaag 95
            ||||| ||||||||||||||||||
Sbjct: 3401 aaggctgaaattgaaaagaaaaag 3378



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>emb|BX000522.11| Zebrafish DNA sequence from clone CH211-146K11, complete sequence
          Length = 175406

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 78    gaaattgaaaagaaaaagga 97
             ||||||||||||||||||||
Sbjct: 29027 gaaattgaaaagaaaaagga 29046



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>emb|AL929103.7| Zebrafish DNA sequence from clone CH211-122O8, complete sequence
          Length = 168630

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 78    gaaattgaaaagaaaaagga 97
             ||||||||||||||||||||
Sbjct: 49970 gaaattgaaaagaaaaagga 49951



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>emb|AL928703.9| Mouse DNA sequence from clone RP23-308K19 on chromosome 2, complete
             sequence
          Length = 109891

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 78    gaaattgaaaagaaaaagga 97
             ||||||||||||||||||||
Sbjct: 86405 gaaattgaaaagaaaaagga 86424



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>emb|CR388128.18| Zebrafish DNA sequence from clone CH211-127B17 in linkage group 18,
              complete sequence
          Length = 180022

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 78     gaaattgaaaagaaaaagga 97
              ||||||||||||||||||||
Sbjct: 117688 gaaattgaaaagaaaaagga 117669



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>dbj|AP004933.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT10J03, TM0094b,
             complete sequence
          Length = 65726

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 77    agaaattgaaaagaaaaagg 96
             ||||||||||||||||||||
Sbjct: 59460 agaaattgaaaagaaaaagg 59479


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,673,314
Number of Sequences: 3902068
Number of extensions: 3673314
Number of successful extensions: 75202
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 75007
Number of HSP's gapped (non-prelim): 196
length of query: 367
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 345
effective length of database: 17,147,199,772
effective search space: 5915783921340
effective search space used: 5915783921340
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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