ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal15o23 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009457.1| Triticum aestivum clone wlp1c.pk007.f6:fis, full insert mRNA sequence Length = 1556 Score = 1106 bits (558), Expect = 0.0 Identities = 591/602 (98%) Strand = Plus / Plus Query: 1 gctgctcacggagatggacggcttctccggaaacagcggtgtcatcgtgctcgccgcgac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 372 gctgctcacggagatggacggcttctccggaaacagcggtgtcatcgtgctcgccgcgac 431 Query: 61 caacaggccggatgtgcttgactccgcgcttctgcggccagggcggttcgatcggcaggt 120 |||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 432 caacaggccggatgtgctcgactcggcgcttctgcggccagggcggtttgatcggcaggt 491 Query: 121 caccgtcgaccgtccggatgtagccggccgtgtcaggatccttgaggttcactccagagg 180 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 492 caccgtcgaccgtccggatgtcgccggccgtgtcaggatccttgaggttcactccagagg 551 Query: 181 aaaggcattggcgaaggatgtggactttgataaggttgccagaaggacacctggtttcac 240 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 552 aaaggcattggcgaaggatgtagactttgataaggttgccagaaggacacctggtttcac 611 Query: 241 cggtgctgatcttcagaacttgatgaatgaggctgccatccttgccgctcgtcgtgatct 300 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 612 cggtgctgatcttcagaacttgatgaatgaggctgccatccttgctgctcgtcgtgatct 671 Query: 301 gaaggagataagcaaggacgagatctctgacgctctggagaggatcattgccgggcctga 360 |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| Sbjct: 672 gaaggagataagcaaggacgagatctctgatgctctggagaggatcattgctgggcctga 731 Query: 361 gaagaagaatgcagttgtttcagaacagaagaggaagcttgtggcttaccatgaggctgg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 732 gaagaagaatgcagttgtttcagaacagaagaggaagcttgtggcttaccatgaggctgg 791 Query: 421 acatgccctcgtcggtgccctgatgcctgaatatgaccctgttgccaagatttccatcat 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 792 acatgccctcgtcggtgccctgatgcctgaatatgaccctgttgccaagatttccatcat 851 Query: 481 tcctcgaggtcaggctggtggtctcacgttctttgctccaagcgaagagaggctcgagtc 540 |||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 852 tcctcgaggtcaagctggtgggctcacgttctttgctccaagcgaagagaggcttgagtc 911 Query: 541 tggactgtacagcaggagctacctagagaaccaaatggctgtggcacttggtggcagggt 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 912 tggactgtacagcaggagctacctagagaaccaaatggctgtggcacttggtggcagggt 971 Query: 601 tg 602 || Sbjct: 972 tg 973
>dbj|AK065019.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001F19, full insert sequence Length = 2378 Score = 626 bits (316), Expect = e-176 Identities = 505/568 (88%) Strand = Plus / Plus Query: 35 agcggtgtcatcgtgctcgccgcgaccaacaggccggatgtgcttgactccgcgcttctg 94 ||||||||||| |||||||||||||| |||||||| |||||||| ||| | || ||||| Sbjct: 1141 agcggtgtcattgtgctcgccgcgacaaacaggcctgatgtgctcgacgcggctcttctt 1200 Query: 95 cggccagggcggttcgatcggcaggtcaccgtcgaccgtccggatgtagccggccgtgtc 154 || || ||| |||||||||||||||||||||| ||| | |||||||| ||||| |||||| Sbjct: 1201 cgccctgggaggttcgatcggcaggtcaccgtagacaggccggatgtcgccgggcgtgtc 1260 Query: 155 aggatccttgaggttcactccagaggaaaggcattggcgaaggatgtggactttgataag 214 | ||| |||||||||||||| ||||||||||| |||| || ||||| |||||||| || Sbjct: 1261 aagattcttgaggttcactcgagaggaaaggctctggcaaaagatgtcgactttgagaaa 1320 Query: 215 gttgccagaaggacacctggtttcaccggtgctgatcttcagaacttgatgaatgaggct 274 ||||| | || || ||||||||||| || ||||||||||| |||||||||||||||||| Sbjct: 1321 attgcccggagaacccctggtttcactggagctgatcttcaaaacttgatgaatgaggct 1380 Query: 275 gccatccttgccgctcgtcgtgatctgaaggagataagcaaggacgagatctctgacgct 334 || || ||||| ||||||||||||||||||||||| |||||||| ||||||||||| ||| Sbjct: 1381 gctattcttgctgctcgtcgtgatctgaaggagattagcaaggatgagatctctgatgct 1440 Query: 335 ctggagaggatcattgccgggcctgagaagaagaatgcagttgtttcagaacagaagagg 394 |||||||||||||||| |||||||||||||| ||||| |||||||||||| |||||||| Sbjct: 1441 ttggagaggatcattgctgggcctgagaagaaaaatgctgttgtttcagaagagaagagg 1500 Query: 395 aagcttgtggcttaccatgaggctggacatgccctcgtcggtgccctgatgcctgaatat 454 | ||||||||||||||||||||||| |||||||| || |||||||| |||||||||||| Sbjct: 1501 agacttgtggcttaccatgaggctggtcatgcccttgttggtgccctcatgcctgaatat 1560 Query: 455 gaccctgttgccaagatttccatcattcctcgaggtcaggctggtggtctcacgttcttt 514 ||||||||||| |||||||||||||||||||| ||||| |||||||| ||||| |||||| Sbjct: 1561 gaccctgttgctaagatttccatcattcctcgtggtcaagctggtggactcacattcttt 1620 Query: 515 gctccaagcgaagagaggctcgagtctggactgtacagcaggagctacctagagaaccaa 574 ||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||| Sbjct: 1621 gctccaagcgaggagaggcttgagtctggattgtacagcaggagctacctagagaaccaa 1680 Query: 575 atggctgtggcacttggtggcagggttg 602 ||||| || || |||||||| ||||||| Sbjct: 1681 atggccgtagctcttggtggaagggttg 1708
>dbj|AK061771.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-C10, full insert sequence Length = 1325 Score = 620 bits (313), Expect = e-174 Identities = 505/568 (88%), Gaps = 2/568 (0%) Strand = Plus / Plus Query: 35 agcggtgtcatcgtgctcgccgcgaccaacaggccggatgtgcttgactccgcgcttctg 94 ||||||||||| |||||||||||||| |||||||| |||||||| ||| | || ||||| Sbjct: 199 agcggtgtcattgtgctcgccgcgacaaacaggcctgatgtgctcgacgcggctcttctt 258 Query: 95 cggccagggcggttcgatcggcaggtcaccgtcgaccgtccggatgtagccggccgtgtc 154 || || ||| |||||||||||||||||||||| ||| | |||||||| ||||| |||||| Sbjct: 259 cgccctgggaggttcgatcggcaggtcaccgtagacaggccggatgtcgccgggcgtgtc 318 Query: 155 aggatccttgaggttcactccagaggaaaggcattggcgaaggatgtggactttgataag 214 | ||| |||||||||||||| ||||||||||| |||| || ||||| |||||||| || Sbjct: 319 aagattcttgaggttcactcgagaggaaaggc--tggcaaaagatgtcgactttgagaaa 376 Query: 215 gttgccagaaggacacctggtttcaccggtgctgatcttcagaacttgatgaatgaggct 274 ||||| | || || ||||||||||| || ||||||||||| |||||||||||||||||| Sbjct: 377 attgcccggagaacccctggtttcactggagctgatcttcaaaacttgatgaatgaggct 436 Query: 275 gccatccttgccgctcgtcgtgatctgaaggagataagcaaggacgagatctctgacgct 334 || || ||||| ||||||||||||||||||||||| |||||||| ||||||||||| ||| Sbjct: 437 gctattcttgctgctcgtcgtgatctgaaggagattagcaaggatgagatctctgatgct 496 Query: 335 ctggagaggatcattgccgggcctgagaagaagaatgcagttgtttcagaacagaagagg 394 |||||||||||||||| |||||||||||||| ||||| |||||||||||| |||||||| Sbjct: 497 ttggagaggatcattgctgggcctgagaagaaaaatgctgttgtttcagaagagaagagg 556 Query: 395 aagcttgtggcttaccatgaggctggacatgccctcgtcggtgccctgatgcctgaatat 454 | ||||||||||||||||||||||| |||||||| || |||||||| |||||||||||| Sbjct: 557 agacttgtggcttaccatgaggctggtcatgcccttgttggtgccctcatgcctgaatat 616 Query: 455 gaccctgttgccaagatttccatcattcctcgaggtcaggctggtggtctcacgttcttt 514 ||||||||||| |||||||||||||||||||| ||||| |||||||| ||||| |||||| Sbjct: 617 gaccctgttgctaagatttccatcattcctcgtggtcaagctggtggactcacattcttt 676 Query: 515 gctccaagcgaagagaggctcgagtctggactgtacagcaggagctacctagagaaccaa 574 ||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||| Sbjct: 677 gctccaagcgaggagaggcttgagtctggattgtacagcaggagctacctagagaaccaa 736 Query: 575 atggctgtggcacttggtggcagggttg 602 ||||| || || |||||||| ||||||| Sbjct: 737 atggccgtagctcttggtggaagggttg 764
>gb|BT009148.1| Triticum aestivum clone wl1n.pk0059.g7:fis, full insert mRNA sequence Length = 890 Score = 543 bits (274), Expect = e-151 Identities = 295/302 (97%) Strand = Plus / Plus Query: 301 gaaggagataagcaaggacgagatctctgacgctctggagaggatcattgccgggcctga 360 |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| || Sbjct: 8 gaaggagataagcaaggacgagatctctgatgctctggagaggatcattgctgggcccga 67 Query: 361 gaagaagaatgcagttgtttcagaacagaagaggaagcttgtggcttaccatgaggctgg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 68 gaagaagaatgcagttgtttcagaacagaagaggaagcttgtggcttaccatgaggctgg 127 Query: 421 acatgccctcgtcggtgccctgatgcctgaatatgaccctgttgccaagatttccatcat 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128 acatgccctcgtcggtgccctgatgcctgaatatgaccctgttgccaagatttccatcat 187 Query: 481 tcctcgaggtcaggctggtggtctcacgttctttgctccaagcgaagagaggctcgagtc 540 |||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 188 tcctcgtggtcaagctggtgggctcacgttctttgctccaagcgaagagaggctcgagtc 247 Query: 541 tggactgtacagcaggagctacctagagaaccaaatggctgtggcacttggtggcagggt 600 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 248 tgggctgtacagcaggagctacctagagaaccaaatggctgtggcacttggtggcagggt 307 Query: 601 tg 602 || Sbjct: 308 tg 309
>gb|AY103957.1| Zea mays PCO116832 mRNA sequence Length = 1820 Score = 521 bits (263), Expect = e-145 Identities = 512/595 (86%) Strand = Plus / Plus Query: 8 acggagatggacggcttctccggaaacagcggtgtcatcgtgctcgccgcgaccaacagg 67 ||||||||||| |||||| | || |||||||||||||| ||||| ||||| ||||||||| Sbjct: 466 acggagatggatggcttcgctggcaacagcggtgtcattgtgcttgccgccaccaacagg 525 Query: 68 ccggatgtgcttgactccgcgcttctgcggccagggcggttcgatcggcaggtcaccgtc 127 || |||||||| ||||||||||| || || |||||| | || ||| ||||||||||||| Sbjct: 526 cccgatgtgctggactccgcgctcctacgaccagggagatttgataggcaggtcaccgtt 585 Query: 128 gaccgtccggatgtagccggccgtgtcaggatccttgaggttcactccagaggaaaggca 187 ||| | || ||||| ||||| || |||| ||| |||||||| |||||| |||||||||| Sbjct: 586 gacaggccagatgttgccggacgcgtcaagattcttgaggtccactcccgaggaaaggct 645 Query: 188 ttggcgaaggatgtggactttgataaggttgccagaaggacacctggtttcaccggtgct 247 |||||||| ||||| || |||||||| |||| |||||||| ||||||||||| |||||| Sbjct: 646 ttggcgaaagatgttgattttgataaaattgctagaaggacccctggtttcactggtgct 705 Query: 248 gatcttcagaacttgatgaatgaggctgccatccttgccgctcgtcgtgatctgaaggag 307 || || || ||| | ||||||||||||||||||||||| ||||| |||||||| ||||| Sbjct: 706 gacctccaaaacctcatgaatgaggctgccatccttgctgctcgccgtgatcttaaggaa 765 Query: 308 ataagcaaggacgagatctctgacgctctggagaggatcattgccgggcctgagaagaag 367 || |||||||| ||||||||||| ||||| ||||| |||||||| || ||||||||||| Sbjct: 766 attagcaaggatgagatctctgatgctcttgagagaatcattgctggccctgagaagaaa 825 Query: 368 aatgcagttgtttcagaacagaagaggaagcttgtggcttaccatgaggctggacatgcc 427 ||||| |||||||| || |||||| || ||| || ||||||||||||||||| |||||| Sbjct: 826 aatgctgttgtttccgaggagaagaagaggctcgtcgcttaccatgaggctggccatgcc 885 Query: 428 ctcgtcggtgccctgatgcctgaatatgaccctgttgccaagatttccatcattcctcga 487 || ||||| ||||| ||||| || ||||| || || ||||||||||||||||| ||||| Sbjct: 886 cttgtcggcgccctcatgccagagtatgatccagtagccaagatttccatcatccctcgt 945 Query: 488 ggtcaggctggtggtctcacgttctttgctccaagcgaagagaggctcgagtctggactg 547 || ||||||||||| ||||| |||||||||||||||||||| ||||| || |||||| || Sbjct: 946 ggccaggctggtggactcacattctttgctccaagcgaagaaaggctagaatctggattg 1005 Query: 548 tacagcaggagctacctagagaaccaaatggctgtggcacttggtggcagggttg 602 |||||||||||||| || ||||||||||||||||| || |||||||||||||||| Sbjct: 1006 tacagcaggagctatcttgagaaccaaatggctgtagcccttggtggcagggttg 1060
>ref|NM_103909.3| Arabidopsis thaliana FTSH1; ATP-dependent peptidase/ ATPase/ metallopeptidase AT1G50250 (FTSH1) mRNA, complete cds Length = 2473 Score = 337 bits (170), Expect = 3e-89 Identities = 347/406 (85%) Strand = Plus / Plus Query: 197 gatgtggactttgataaggttgccagaaggacacctggtttcaccggtgctgatcttcag 256 |||||||||||||| ||||||||||||||||| ||||||||||| |||||||| | || Sbjct: 1490 gatgtggactttgacaaggttgccagaaggacccctggtttcacgggtgctgacttacaa 1549 Query: 257 aacttgatgaatgaggctgccatccttgccgctcgtcgtgatctgaaggagataagcaag 316 ||| |||||||||| || || || ||||| ||| | ||||| || ||||| ||||||||| Sbjct: 1550 aacctgatgaatgaagcggcgattcttgcggctaggcgtgagcttaaggaaataagcaag 1609 Query: 317 gacgagatctctgacgctctggagaggatcattgccgggcctgagaagaagaatgcagtt 376 || || |||||||| ||||| |||||||||||||| || ||||||||||||||||||||| Sbjct: 1610 gatgaaatctctgatgctcttgagaggatcattgctggacctgagaagaagaatgcagtt 1669 Query: 377 gtttcagaacagaagaggaagcttgtggcttaccatgaggctggacatgccctcgtcggt 436 || || ||| |||||| || ||||| || |||||||||||||| ||||| || || ||| Sbjct: 1670 gtctctgaagagaagaagagacttgttgcataccatgaggctggtcatgctctagtgggt 1729 Query: 437 gccctgatgcctgaatatgaccctgttgccaagatttccatcattcctcgaggtcaggct 496 || || ||||| |||||||| || ||||| |||||||| ||||||||||| || || ||| Sbjct: 1730 gctcttatgccagaatatgatccggttgcaaagatttctatcattcctcgtggccaagct 1789 Query: 497 ggtggtctcacgttctttgctccaagcgaagagaggctcgagtctggactgtacagcagg 556 ||||| ||||| || ||||||||||||||||| || || ||||||||| ||||||| ||| Sbjct: 1790 ggtgggctcactttttttgctccaagcgaagaaagacttgagtctggattgtacagtagg 1849 Query: 557 agctacctagagaaccaaatggctgtggcacttggtggcagggttg 602 |||||||| ||||| ||||||||||| |||||||| || ||||||| Sbjct: 1850 agctaccttgagaatcaaatggctgttgcacttggcggaagggttg 1895
>gb|AY123034.1| Arabidopsis thaliana putative chloroplast FtsH protease (At1g50250) mRNA, complete cds Length = 2182 Score = 337 bits (170), Expect = 3e-89 Identities = 347/406 (85%) Strand = Plus / Plus Query: 197 gatgtggactttgataaggttgccagaaggacacctggtttcaccggtgctgatcttcag 256 |||||||||||||| ||||||||||||||||| ||||||||||| |||||||| | || Sbjct: 1357 gatgtggactttgacaaggttgccagaaggacccctggtttcacgggtgctgacttacaa 1416 Query: 257 aacttgatgaatgaggctgccatccttgccgctcgtcgtgatctgaaggagataagcaag 316 ||| |||||||||| || || || ||||| ||| | ||||| || ||||| ||||||||| Sbjct: 1417 aacctgatgaatgaagcggcgattcttgcggctaggcgtgagcttaaggaaataagcaag 1476 Query: 317 gacgagatctctgacgctctggagaggatcattgccgggcctgagaagaagaatgcagtt 376 || || |||||||| ||||| |||||||||||||| || ||||||||||||||||||||| Sbjct: 1477 gatgaaatctctgatgctcttgagaggatcattgctggacctgagaagaagaatgcagtt 1536 Query: 377 gtttcagaacagaagaggaagcttgtggcttaccatgaggctggacatgccctcgtcggt 436 || || ||| |||||| || ||||| || |||||||||||||| ||||| || || ||| Sbjct: 1537 gtctctgaagagaagaagagacttgttgcataccatgaggctggtcatgctctagtgggt 1596 Query: 437 gccctgatgcctgaatatgaccctgttgccaagatttccatcattcctcgaggtcaggct 496 || || ||||| |||||||| || ||||| |||||||| ||||||||||| || || ||| Sbjct: 1597 gctcttatgccagaatatgatccggttgcaaagatttctatcattcctcgtggccaagct 1656 Query: 497 ggtggtctcacgttctttgctccaagcgaagagaggctcgagtctggactgtacagcagg 556 ||||| ||||| || ||||||||||||||||| || || ||||||||| ||||||| ||| Sbjct: 1657 ggtgggctcactttttttgctccaagcgaagaaagacttgagtctggattgtacagtagg 1716 Query: 557 agctacctagagaaccaaatggctgtggcacttggtggcagggttg 602 |||||||| ||||| ||||||||||| |||||||| || ||||||| Sbjct: 1717 agctaccttgagaatcaaatggctgttgcacttggcggaagggttg 1762
>gb|AY091095.1| Arabidopsis thaliana putative chloroplast FtsH protease (At1g50250) mRNA, complete cds Length = 2452 Score = 337 bits (170), Expect = 3e-89 Identities = 347/406 (85%) Strand = Plus / Plus Query: 197 gatgtggactttgataaggttgccagaaggacacctggtttcaccggtgctgatcttcag 256 |||||||||||||| ||||||||||||||||| ||||||||||| |||||||| | || Sbjct: 1453 gatgtggactttgacaaggttgccagaaggacccctggtttcacgggtgctgacttacaa 1512 Query: 257 aacttgatgaatgaggctgccatccttgccgctcgtcgtgatctgaaggagataagcaag 316 ||| |||||||||| || || || ||||| ||| | ||||| || ||||| ||||||||| Sbjct: 1513 aacctgatgaatgaagcggcgattcttgcggctaggcgtgagcttaaggaaataagcaag 1572 Query: 317 gacgagatctctgacgctctggagaggatcattgccgggcctgagaagaagaatgcagtt 376 || || |||||||| ||||| |||||||||||||| || ||||||||||||||||||||| Sbjct: 1573 gatgaaatctctgatgctcttgagaggatcattgctggacctgagaagaagaatgcagtt 1632 Query: 377 gtttcagaacagaagaggaagcttgtggcttaccatgaggctggacatgccctcgtcggt 436 || || ||| |||||| || ||||| || |||||||||||||| ||||| || || ||| Sbjct: 1633 gtctctgaagagaagaagagacttgttgcataccatgaggctggtcatgctctagtgggt 1692 Query: 437 gccctgatgcctgaatatgaccctgttgccaagatttccatcattcctcgaggtcaggct 496 || || ||||| |||||||| || ||||| |||||||| ||||||||||| || || ||| Sbjct: 1693 gctcttatgccagaatatgatccggttgcaaagatttctatcattcctcgtggccaagct 1752 Query: 497 ggtggtctcacgttctttgctccaagcgaagagaggctcgagtctggactgtacagcagg 556 ||||| ||||| || ||||||||||||||||| || || ||||||||| ||||||| ||| Sbjct: 1753 ggtgggctcactttttttgctccaagcgaagaaagacttgagtctggattgtacagtagg 1812 Query: 557 agctacctagagaaccaaatggctgtggcacttggtggcagggttg 602 |||||||| ||||| ||||||||||| |||||||| || ||||||| Sbjct: 1813 agctaccttgagaatcaaatggctgttgcacttggcggaagggttg 1858
>emb|X99808.1|ATFTSH A.thaliana mRNA for chloroplast FtsH protease Length = 2447 Score = 329 bits (166), Expect = 6e-87 Identities = 346/406 (85%) Strand = Plus / Plus Query: 197 gatgtggactttgataaggttgccagaaggacacctggtttcaccggtgctgatcttcag 256 |||||||||||||| ||||||||||||||||| ||||||||||| |||||||| | || Sbjct: 1488 gatgtggactttgacaaggttgccagaaggacccctggtttcacgggtgctgacttacaa 1547 Query: 257 aacttgatgaatgaggctgccatccttgccgctcgtcgtgatctgaaggagataagcaag 316 ||| |||||||||| || || || ||||| ||| | ||||| | ||||| ||||||||| Sbjct: 1548 aacctgatgaatgaagcggcgattcttgcggctaggcgtgacgttaaggaaataagcaag 1607 Query: 317 gacgagatctctgacgctctggagaggatcattgccgggcctgagaagaagaatgcagtt 376 || || |||||||| ||||| |||||||||||||| || ||||||||||||||||||||| Sbjct: 1608 gatgaaatctctgatgctcttgagaggatcattgctggacctgagaagaagaatgcagtt 1667 Query: 377 gtttcagaacagaagaggaagcttgtggcttaccatgaggctggacatgccctcgtcggt 436 || || ||| |||||| || ||||| || |||||||||||||| ||||| || || ||| Sbjct: 1668 gtctctgaagagaagaagagacttgttgcataccatgaggctggtcatgctctagtgggt 1727 Query: 437 gccctgatgcctgaatatgaccctgttgccaagatttccatcattcctcgaggtcaggct 496 || || ||||| |||||||| || ||||| |||||||| ||||||||||| || || ||| Sbjct: 1728 gctcttatgccagaatatgatccggttgcaaagatttctatcattcctcgtggccaagct 1787 Query: 497 ggtggtctcacgttctttgctccaagcgaagagaggctcgagtctggactgtacagcagg 556 ||||| ||||| || ||||||||||||||||| || || ||||||||| ||||||| ||| Sbjct: 1788 ggtgggctcactttttttgctccaagcgaagaaagacttgagtctggattgtacagtagg 1847 Query: 557 agctacctagagaaccaaatggctgtggcacttggtggcagggttg 602 |||||||| ||||| ||||||||||| |||||||| || ||||||| Sbjct: 1848 agctaccttgagaatcaaatggctgttgcacttggcggaagggttg 1893
>emb|BX815046.1|CNS0AE0R Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS28ZC04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2428 Score = 323 bits (163), Expect = 4e-85 Identities = 337/395 (85%) Strand = Plus / Plus Query: 197 gatgtggactttgataaggttgccagaaggacacctggtttcaccggtgctgatcttcag 256 |||||||||||||| ||||||||||||||||| ||||||||||| |||||||| | || Sbjct: 1489 gatgtggactttgacaaggttgccagaaggacccctggtttcacgggtgctgacttacaa 1548 Query: 257 aacttgatgaatgaggctgccatccttgccgctcgtcgtgatctgaaggagataagcaag 316 ||| |||||||||| || || || ||||| ||| | ||||| || ||||| ||||||||| Sbjct: 1549 aacctgatgaatgaagcggcgattcttgcggctaggcgtgagcttaaggaaataagcaag 1608 Query: 317 gacgagatctctgacgctctggagaggatcattgccgggcctgagaagaagaatgcagtt 376 || || |||||||| ||||| |||||||||||||| || ||||||||||||||||||||| Sbjct: 1609 gatgaaatctctgatgctcttgagaggatcattgctggacctgagaagaagaatgcagtt 1668 Query: 377 gtttcagaacagaagaggaagcttgtggcttaccatgaggctggacatgccctcgtcggt 436 || || ||| |||||| || ||||| || ||||||||||||| ||||| || || ||| Sbjct: 1669 gtctctgaagagaagaagagacttgttgcacaccatgaggctggtcatgctctagtgggt 1728 Query: 437 gccctgatgcctgaatatgaccctgttgccaagatttccatcattcctcgaggtcaggct 496 || || ||||| |||||||| || ||||| |||||||| ||||||||||| || || ||| Sbjct: 1729 gctcttatgccagaatatgatccggttgcaaagatttctatcattcctcgtggccaagct 1788 Query: 497 ggtggtctcacgttctttgctccaagcgaagagaggctcgagtctggactgtacagcagg 556 ||||| ||||| || ||||||||||||||||| || || ||||||||| ||||||| ||| Sbjct: 1789 ggtgggctcactttttttgctccaagcgaagaaagacttgagtctggattgtacagtagg 1848 Query: 557 agctacctagagaaccaaatggctgtggcacttgg 591 |||||||| ||||| ||||||||||| |||||||| Sbjct: 1849 agctaccttgagaatcaaatggctgttgcacttgg 1883
>emb|X90472.1|CAATPASE C.annuum mRNA for ATPase protein Length = 1989 Score = 299 bits (151), Expect = 5e-78 Identities = 376/451 (83%) Strand = Plus / Plus Query: 152 gtcaggatccttgaggttcactccagaggaaaggcattggcgaaggatgtggactttgat 211 |||||||| ||| |||| || || ||||||||||| | || |||||||||||||||||| Sbjct: 1218 gtcaggattcttcaggtacattctagaggaaaggcccttgcaaaggatgtggactttgat 1277 Query: 212 aaggttgccagaaggacacctggtttcaccggtgctgatcttcagaacttgatgaatgag 271 ||| ||||||| || || || |||||||| ||||| ||| | || ||||||||||| || Sbjct: 1278 aagattgccaggagaactccaggtttcactggtgcagatttacaaaacttgatgaacgaa 1337 Query: 272 gctgccatccttgccgctcgtcgtgatctgaaggagataagcaaggacgagatctctgac 331 || ||||||||||| ||| | ||||| || ||||| ||||| || || ||||| ||||| Sbjct: 1338 gcagccatccttgcagctaggcgtgacctaaaggaaataagtaaagatgagatatctgat 1397 Query: 332 gctctggagaggatcattgccgggcctgagaagaagaatgcagttgtttcagaacagaag 391 |||||||||||||| ||||| || || |||||||| || || ||||| ||||| ||||| Sbjct: 1398 gctctggagaggataattgctggtccggagaagaaaaacgctgttgtctcagatgagaag 1457 Query: 392 aggaagcttgtggcttaccatgaggctggacatgccctcgtcggtgccctgatgcctgaa 451 | |||||| || ||||| ||||||||||| |||||| | || ||||| || ||||| || Sbjct: 1458 aagaagctggtagcttatcatgaggctggccatgccttggttggtgcacttatgcccgag 1517 Query: 452 tatgaccctgttgccaagatttccatcattcctcgaggtcaggctggtggtctcacgttc 511 ||||| |||||||||||||| || || |||||||| || || || ||||||||||| ||| Sbjct: 1518 tatgatcctgttgccaagatatctataattcctcgtggccaagccggtggtctcaccttc 1577 Query: 512 tttgctccaagcgaagagaggctcgagtctggactgtacagcaggagctacctagagaac 571 ||||| || |||||||| || || ||||| || |||||||||||||||||||||||||| Sbjct: 1578 tttgcccccagcgaagaaagacttgagtcaggcctgtacagcaggagctacctagagaat 1637 Query: 572 caaatggctgtggcacttggtggcagggttg 602 |||||||| || ||||||||||| ||||||| Sbjct: 1638 caaatggcagttgcacttggtggaagggttg 1668
>gb|DQ339462.1| Vitis pseudoreticulata ATPase mRNA, complete cds Length = 600 Score = 289 bits (146), Expect = 5e-75 Identities = 365/438 (83%) Strand = Plus / Plus Query: 157 gatccttgaggttcactccagaggaaaggcattggcgaaggatgtggactttgataaggt 216 ||||||| |||| ||||| ||||| |||||| | || |||||||| |||||||| ||| | Sbjct: 144 gatccttcaggtgcactcaagagggaaggcactagccaaggatgtagactttgaaaagat 203 Query: 217 tgccagaaggacacctggtttcaccggtgctgatcttcagaacttgatgaatgaggctgc 276 ||| |||||||| || || ||||| || ||||| | |||||| ||||||||||||| || Sbjct: 204 tgcgagaaggaccccaggcttcacaggggctgacttgcagaacctgatgaatgaggcagc 263 Query: 277 catccttgccgctcgtcgtgatctgaaggagataagcaaggacgagatctctgacgctct 336 |||||| || ||| | ||||| || ||||||||||||||||| ||||| ||||| || || Sbjct: 264 catcctcgcagctaggcgtgacctcaaggagataagcaaggatgagatatctgatgccct 323 Query: 337 ggagaggatcattgccgggcctgagaagaagaatgcagttgtttcagaacagaagaggaa 396 ||||||||| ||||| ||||| |||||||| ||||| || || ||||| |||||| ||| Sbjct: 324 ggagaggataattgctgggccagagaagaaaaatgctgtggtctcagacgagaagaagaa 383 Query: 397 gcttgtggcttaccatgaggctggacatgccctcgtcggtgccctgatgcctgaatatga 456 | || || || ||||||||||| ||||| | |||||||| || |||||||||||||| Sbjct: 384 attagttgcctatcatgaggctgggcatgcattggtcggtgcacttatgcctgaatatga 443 Query: 457 ccctgttgccaagatttccatcattcctcgaggtcaggctggtggtctcacgttctttgc 516 |||||| |||||||| ||||||||||| || || || || |||||||| || || ||||| Sbjct: 444 ccctgtggccaagatatccatcattccccgtggccaagcaggtggtcttaccttttttgc 503 Query: 517 tccaagcgaagagaggctcgagtctggactgtacagcaggagctacctagagaaccaaat 576 |||||| |||||||| |||||||||||||||||||| || || ||||| ||||| || || Sbjct: 504 tccaagtgaagagagactcgagtctggactgtacagtagaagttacctggagaatcagat 563 Query: 577 ggctgtggcacttggtgg 594 |||||| ||||| ||||| Sbjct: 564 ggctgttgcactgggtgg 581
>emb|Y12780.1|ATAAAA A.thaliana mRNA for ATPase, partial Length = 2190 Score = 272 bits (137), Expect = 1e-69 Identities = 325/385 (84%), Gaps = 2/385 (0%) Strand = Plus / Plus Query: 197 gatgtggactttgataaggttgccagaaggacacctggtttcaccggtgctgatcttcag 256 |||||||||||||| ||||||||||||||| | ||||||||||| |||||||| | || Sbjct: 1153 gatgtggactttgacaaggttgccagaaggtcccctggtttcacgggtgctgacttacaa 1212 Query: 257 aacttgatgaatgaggctgccatccttgccgctcgtcgtgatctgaaggagataagcaag 316 ||| |||||||||| || || || ||||| ||| | ||||| || ||||| ||||||||| Sbjct: 1213 aacctgatgaatgaagcggcgattcttgcggctaggcgtgagcttaaggaaataagcaag 1272 Query: 317 gacgagatctctgacgctctggagaggatcattgccgggcctgagaagaagaatgcagtt 376 || || |||||||| ||||| |||||||||||||| || ||||||||||||||||||||| Sbjct: 1273 gatgaaatctctgatgctcttgagaggatcattgctggacctgagaagaagaatgcagtt 1332 Query: 377 gtttcagaacagaagaggaagcttgtggcttaccatgaggctggacatgccct-cgtcgg 435 || || ||| |||||| || ||||| || |||||||||||||| ||||| || || || Sbjct: 1333 gtctctgaagagaagaagagacttgttgcataccatgaggctggtcatgctctaggtggg 1392 Query: 436 tgccctgatgcctgaatatgaccctgttgccaagatttccatcattcctcgaggtcaggc 495 ||| || || || |||||| | || ||||| |||||||| ||||||||||| || || || Sbjct: 1393 tgctcttat-ccagaatataatccggttgcaaagatttctatcattcctcgtggccaagc 1451 Query: 496 tggtggtctcacgttctttgctccaagcgaagagaggctcgagtctggactgtacagcag 555 |||||| ||||| || ||||||||||||||||| || || ||||||||| ||||||| || Sbjct: 1452 tggtgggctcactttttttgctccaagcgaagaaagacttgagtctggattgtacagtag 1511 Query: 556 gagctacctagagaaccaaatggct 580 ||||||||| ||||| ||||||||| Sbjct: 1512 gagctaccttgagaatcaaatggct 1536
>dbj|AB017480.2| Nicotiana tabacum mRNA for chloroplast FtsH protease, complete cds Length = 2447 Score = 272 bits (137), Expect = 1e-69 Identities = 341/409 (83%) Strand = Plus / Plus Query: 194 aaggatgtggactttgataaggttgccagaaggacacctggtttcaccggtgctgatctt 253 ||||||||||||||||| ||| ||||||| || ||||| |||| ||| ||||| ||| | Sbjct: 1348 aaggatgtggactttgagaagattgccaggagaacaccgggttacactggtgcagatttg 1407 Query: 254 cagaacttgatgaatgaggctgccatccttgccgctcgtcgtgatctgaaggagataagc 313 || ||||||||||| || || || |||||||| ||| | ||||| || ||||| ||||| Sbjct: 1408 caaaacttgatgaacgaagcagcaatccttgcagctaggcgtgaactaaaggaaataagt 1467 Query: 314 aaggacgagatctctgacgctctggagaggatcattgccgggcctgagaagaagaatgca 373 || || ||||| ||||| |||||||||||||| |||||||| || |||||||| ||||| Sbjct: 1468 aaagatgagatatctgatgctctggagaggataattgccggcccagagaagaaaaatgct 1527 Query: 374 gttgtttcagaacagaagaggaagcttgtggcttaccatgaggctggacatgccctcgtc 433 ||||| ||||| |||||| |||||| || ||||| |||||||| || |||||| | || Sbjct: 1528 gttgtctcagatgagaagaagaagctggtagcttatcatgaggccggccatgccttggtt 1587 Query: 434 ggtgccctgatgcctgaatatgaccctgttgccaagatttccatcattcctcgaggtcag 493 ||||| || ||||| || ||||| |||||||||||||| || || ||||||||||| || Sbjct: 1588 ggtgcacttatgcccgagtatgatcctgttgccaagatatctataattcctcgaggccaa 1647 Query: 494 gctggtggtctcacgttctttgctccaagcgaagagaggctcgagtctggactgtacagc 553 ||||||||||| || |||||||| || |||||||| || || ||||| || |||||||| Sbjct: 1648 gctggtggtcttaccttctttgcccccagcgaagaaagacttgagtcgggcttgtacagc 1707 Query: 554 aggagctacctagagaaccaaatggctgtggcacttggtggcagggttg 602 ||||||||||||||||| |||||||| || |||||||||| ||||||| Sbjct: 1708 aggagctacctagagaatcaaatggcagttgcacttggtgaaagggttg 1756
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 264 bits (133), Expect = 3e-67 Identities = 220/249 (88%) Strand = Plus / Minus Query: 165 aggttcactccagaggaaaggcattggcgaaggatgtggactttgataaggttgccagaa 224 |||||||||| ||||||||||| |||| || ||||| |||||||| || ||||| | | Sbjct: 30360113 aggttcactcgagaggaaaggctctggcaaaagatgtcgactttgagaaaattgcccgga 30360054 Query: 225 ggacacctggtttcaccggtgctgatcttcagaacttgatgaatgaggctgccatccttg 284 | || ||||||||||| || ||||||||||| |||||||||||||||||||| || |||| Sbjct: 30360053 gaacccctggtttcactggagctgatcttcaaaacttgatgaatgaggctgctattcttg 30359994 Query: 285 ccgctcgtcgtgatctgaaggagataagcaaggacgagatctctgacgctctggagagga 344 | ||||||||||||||||||||||| |||||||| ||||||||||| ||| ||||||||| Sbjct: 30359993 ctgctcgtcgtgatctgaaggagattagcaaggatgagatctctgatgctttggagagga 30359934 Query: 345 tcattgccgggcctgagaagaagaatgcagttgtttcagaacagaagaggaagcttgtgg 404 ||||||| |||||||||||||| ||||| |||||||||||| ||||||||| ||||||| Sbjct: 30359933 tcattgctgggcctgagaagaaaaatgctgttgtttcagaagagaagaggagacttgtgg 30359874 Query: 405 cttaccatg 413 ||||||||| Sbjct: 30359873 cttaccatg 30359865 Score = 242 bits (122), Expect = 1e-60 Identities = 167/182 (91%) Strand = Plus / Minus Query: 413 gaggctggacatgccctcgtcggtgccctgatgcctgaatatgaccctgttgccaagatt 472 |||||||| |||||||| || |||||||| ||||||||||||||||||||||| |||||| Sbjct: 30359771 gaggctggtcatgcccttgttggtgccctcatgcctgaatatgaccctgttgctaagatt 30359712 Query: 473 tccatcattcctcgaggtcaggctggtggtctcacgttctttgctccaagcgaagagagg 532 |||||||||||||| ||||| |||||||| ||||| ||||||||||||||||| |||||| Sbjct: 30359711 tccatcattcctcgtggtcaagctggtggactcacattctttgctccaagcgaggagagg 30359652 Query: 533 ctcgagtctggactgtacagcaggagctacctagagaaccaaatggctgtggcacttggt 592 || ||||||||| |||||||||||||||||||||||||||||||||| || || |||||| Sbjct: 30359651 cttgagtctggattgtacagcaggagctacctagagaaccaaatggccgtagctcttggt 30359592 Query: 593 gg 594 || Sbjct: 30359591 gg 30359590 Score = 123 bits (62), Expect = 7e-25 Identities = 116/134 (86%) Strand = Plus / Minus Query: 35 agcggtgtcatcgtgctcgccgcgaccaacaggccggatgtgcttgactccgcgcttctg 94 ||||||||||| |||||||||||||| |||||||| |||||||| ||| | || ||||| Sbjct: 30360948 agcggtgtcattgtgctcgccgcgacaaacaggcctgatgtgctcgacgcggctcttctt 30360889 Query: 95 cggccagggcggttcgatcggcaggtcaccgtcgaccgtccggatgtagccggccgtgtc 154 || || ||| |||||||||||||||||||||| ||| | |||||||| ||||| |||||| Sbjct: 30360888 cgccctgggaggttcgatcggcaggtcaccgtagacaggccggatgtcgccgggcgtgtc 30360829 Query: 155 aggatccttgaggt 168 | ||| |||||||| Sbjct: 30360828 aagattcttgaggt 30360815
>dbj|AP003685.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0548E04 Length = 138037 Score = 264 bits (133), Expect = 3e-67 Identities = 220/249 (88%) Strand = Plus / Minus Query: 165 aggttcactccagaggaaaggcattggcgaaggatgtggactttgataaggttgccagaa 224 |||||||||| ||||||||||| |||| || ||||| |||||||| || ||||| | | Sbjct: 106708 aggttcactcgagaggaaaggctctggcaaaagatgtcgactttgagaaaattgcccgga 106649 Query: 225 ggacacctggtttcaccggtgctgatcttcagaacttgatgaatgaggctgccatccttg 284 | || ||||||||||| || ||||||||||| |||||||||||||||||||| || |||| Sbjct: 106648 gaacccctggtttcactggagctgatcttcaaaacttgatgaatgaggctgctattcttg 106589 Query: 285 ccgctcgtcgtgatctgaaggagataagcaaggacgagatctctgacgctctggagagga 344 | ||||||||||||||||||||||| |||||||| ||||||||||| ||| ||||||||| Sbjct: 106588 ctgctcgtcgtgatctgaaggagattagcaaggatgagatctctgatgctttggagagga 106529 Query: 345 tcattgccgggcctgagaagaagaatgcagttgtttcagaacagaagaggaagcttgtgg 404 ||||||| |||||||||||||| ||||| |||||||||||| ||||||||| ||||||| Sbjct: 106528 tcattgctgggcctgagaagaaaaatgctgttgtttcagaagagaagaggagacttgtgg 106469 Query: 405 cttaccatg 413 ||||||||| Sbjct: 106468 cttaccatg 106460 Score = 242 bits (122), Expect = 1e-60 Identities = 167/182 (91%) Strand = Plus / Minus Query: 413 gaggctggacatgccctcgtcggtgccctgatgcctgaatatgaccctgttgccaagatt 472 |||||||| |||||||| || |||||||| ||||||||||||||||||||||| |||||| Sbjct: 106366 gaggctggtcatgcccttgttggtgccctcatgcctgaatatgaccctgttgctaagatt 106307 Query: 473 tccatcattcctcgaggtcaggctggtggtctcacgttctttgctccaagcgaagagagg 532 |||||||||||||| ||||| |||||||| ||||| ||||||||||||||||| |||||| Sbjct: 106306 tccatcattcctcgtggtcaagctggtggactcacattctttgctccaagcgaggagagg 106247 Query: 533 ctcgagtctggactgtacagcaggagctacctagagaaccaaatggctgtggcacttggt 592 || ||||||||| |||||||||||||||||||||||||||||||||| || || |||||| Sbjct: 106246 cttgagtctggattgtacagcaggagctacctagagaaccaaatggccgtagctcttggt 106187 Query: 593 gg 594 || Sbjct: 106186 gg 106185 Score = 123 bits (62), Expect = 7e-25 Identities = 116/134 (86%) Strand = Plus / Minus Query: 35 agcggtgtcatcgtgctcgccgcgaccaacaggccggatgtgcttgactccgcgcttctg 94 ||||||||||| |||||||||||||| |||||||| |||||||| ||| | || ||||| Sbjct: 107543 agcggtgtcattgtgctcgccgcgacaaacaggcctgatgtgctcgacgcggctcttctt 107484 Query: 95 cggccagggcggttcgatcggcaggtcaccgtcgaccgtccggatgtagccggccgtgtc 154 || || ||| |||||||||||||||||||||| ||| | |||||||| ||||| |||||| Sbjct: 107483 cgccctgggaggttcgatcggcaggtcaccgtagacaggccggatgtcgccgggcgtgtc 107424 Query: 155 aggatccttgaggt 168 | ||| |||||||| Sbjct: 107423 aagattcttgaggt 107410
>ref|NM_123592.2| Arabidopsis thaliana VAR1 (VARIEGATED 1); ATP-dependent peptidase/ ATPase/ metallopeptidase AT5G42270 (VAR1) mRNA, complete cds Length = 3058 Score = 234 bits (118), Expect = 3e-58 Identities = 307/370 (82%) Strand = Plus / Plus Query: 233 ggtttcaccggtgctgatcttcagaacttgatgaatgaggctgccatccttgccgctcgt 292 |||||||| ||||||||| | |||||| |||||||||| ||||| || ||||| ||| | Sbjct: 1530 ggtttcactggtgctgatttgcagaacctgatgaatgaagctgcgattcttgctgctaga 1589 Query: 293 cgtgatctgaaggagataagcaaggacgagatctctgacgctctggagaggatcattgcc 352 ||||| || ||||||||||||||||| || || ||||| ||||| |||||||||||||| Sbjct: 1590 cgtgagcttaaggagataagcaaggatgaaatatctgatgctcttgagaggatcattgct 1649 Query: 353 gggcctgagaagaagaatgcagttgtttcagaacagaagaggaagcttgtggcttaccat 412 || ||||| |||||||| || ||||| || || |||||| | ||||| ||||||||| Sbjct: 1650 ggacctgaaaagaagaacgctgttgtctctgaggagaagaaaagacttgttgcttaccat 1709 Query: 413 gaggctggacatgccctcgtcggtgccctgatgcctgaatatgaccctgttgccaagatt 472 |||||||| ||||| | || ||||| || ||||| || ||||| || || |||||||| Sbjct: 1710 gaggctgggcatgctttagttggtgcacttatgccggagtatgatccagtggccaagata 1769 Query: 473 tccatcattcctcgaggtcaggctggtggtctcacgttctttgctccaagcgaagagagg 532 || || ||||| || || || |||||||| ||||| || || ||||| |||||||||||| Sbjct: 1770 tcgattattccacgtggccaagctggtgggctcacctttttcgctcctagcgaagagagg 1829 Query: 533 ctcgagtctggactgtacagcaggagctacctagagaaccaaatggctgtggcacttggt 592 || ||||| ||| |||| ||||| |||||||| ||||||||||||||||| ||||||||| Sbjct: 1830 ctagagtccggattgtatagcagaagctaccttgagaaccaaatggctgttgcacttggt 1889 Query: 593 ggcagggttg 602 || ||||||| Sbjct: 1890 ggaagggttg 1899
>gb|AY126987.1| Arabidopsis thaliana AT5g42270/K5J14_7 mRNA, complete cds Length = 2311 Score = 234 bits (118), Expect = 3e-58 Identities = 307/370 (82%) Strand = Plus / Plus Query: 233 ggtttcaccggtgctgatcttcagaacttgatgaatgaggctgccatccttgccgctcgt 292 |||||||| ||||||||| | |||||| |||||||||| ||||| || ||||| ||| | Sbjct: 1456 ggtttcactggtgctgatttgcagaacctgatgaatgaagctgcgattcttgctgctaga 1515 Query: 293 cgtgatctgaaggagataagcaaggacgagatctctgacgctctggagaggatcattgcc 352 ||||| || ||||||||||||||||| || || ||||| ||||| |||||||||||||| Sbjct: 1516 cgtgagcttaaggagataagcaaggatgaaatatctgatgctcttgagaggatcattgct 1575 Query: 353 gggcctgagaagaagaatgcagttgtttcagaacagaagaggaagcttgtggcttaccat 412 || ||||| |||||||| || ||||| || || |||||| | ||||| ||||||||| Sbjct: 1576 ggacctgaaaagaagaacgctgttgtctctgaggagaagaaaagacttgttgcttaccat 1635 Query: 413 gaggctggacatgccctcgtcggtgccctgatgcctgaatatgaccctgttgccaagatt 472 |||||||| ||||| | || ||||| || ||||| || ||||| || || |||||||| Sbjct: 1636 gaggctgggcatgctttagttggtgcacttatgccggagtatgatccagtggccaagata 1695 Query: 473 tccatcattcctcgaggtcaggctggtggtctcacgttctttgctccaagcgaagagagg 532 || || ||||| || || || |||||||| ||||| || || ||||| |||||||||||| Sbjct: 1696 tcgattattccacgtggccaagctggtgggctcacctttttcgctcctagcgaagagagg 1755 Query: 533 ctcgagtctggactgtacagcaggagctacctagagaaccaaatggctgtggcacttggt 592 || ||||| ||| |||| ||||| |||||||| ||||||||||||||||| ||||||||| Sbjct: 1756 ctagagtccggattgtatagcagaagctaccttgagaaccaaatggctgttgcacttggt 1815 Query: 593 ggcagggttg 602 || ||||||| Sbjct: 1816 ggaagggttg 1825
>gb|AC007980.1| Arabidopsis thaliana chromosome I BAC F14I3 genomic sequence, complete sequence Length = 100975 Score = 176 bits (89), Expect = 5e-41 Identities = 185/217 (85%) Strand = Plus / Plus Query: 197 gatgtggactttgataaggttgccagaaggacacctggtttcaccggtgctgatcttcag 256 |||||||||||||| ||||||||||||||||| ||||||||||| |||||||| | || Sbjct: 61377 gatgtggactttgacaaggttgccagaaggacccctggtttcacgggtgctgacttacaa 61436 Query: 257 aacttgatgaatgaggctgccatccttgccgctcgtcgtgatctgaaggagataagcaag 316 ||| |||||||||| || || || ||||| ||| | ||||| || ||||| ||||||||| Sbjct: 61437 aacctgatgaatgaagcggcgattcttgcggctaggcgtgagcttaaggaaataagcaag 61496 Query: 317 gacgagatctctgacgctctggagaggatcattgccgggcctgagaagaagaatgcagtt 376 || || |||||||| ||||| |||||||||||||| || ||||||||||||||||||||| Sbjct: 61497 gatgaaatctctgatgctcttgagaggatcattgctggacctgagaagaagaatgcagtt 61556 Query: 377 gtttcagaacagaagaggaagcttgtggcttaccatg 413 || || ||| |||||| || ||||| || ||||||| Sbjct: 61557 gtctctgaagagaagaagagacttgttgcataccatg 61593 Score = 157 bits (79), Expect = 5e-35 Identities = 154/179 (86%) Strand = Plus / Plus Query: 413 gaggctggacatgccctcgtcggtgccctgatgcctgaatatgaccctgttgccaagatt 472 |||||||| ||||| || || ||||| || ||||| |||||||| || ||||| |||||| Sbjct: 61680 gaggctggtcatgctctagtgggtgctcttatgccagaatatgatccggttgcaaagatt 61739 Query: 473 tccatcattcctcgaggtcaggctggtggtctcacgttctttgctccaagcgaagagagg 532 || ||||||||||| || || |||||||| ||||| || ||||||||||||||||| || Sbjct: 61740 tctatcattcctcgtggccaagctggtgggctcactttttttgctccaagcgaagaaaga 61799 Query: 533 ctcgagtctggactgtacagcaggagctacctagagaaccaaatggctgtggcacttgg 591 || ||||||||| ||||||| ||||||||||| ||||| ||||||||||| |||||||| Sbjct: 61800 cttgagtctggattgtacagtaggagctaccttgagaatcaaatggctgttgcacttgg 61858
>gb|AF332134.1| Medicago sativa FtsH protease (FtsH) mRNA, complete cds; chloroplast gene for chloroplast product Length = 2352 Score = 168 bits (85), Expect = 1e-38 Identities = 355/445 (79%) Strand = Plus / Plus Query: 158 atccttgaggttcactccagaggaaaggcattggcgaaggatgtggactttgataaggtt 217 |||||| |||| || || |||||||| ||| | || |||||||| |||||||| || || Sbjct: 1343 atccttcaggtgcattctagaggaaaagcacttgcaaaggatgttgactttgacaaaatt 1402 Query: 218 gccagaaggacacctggtttcaccggtgctgatcttcagaacttgatgaatgaggctgcc 277 ||||| || || || || ||||| || | |||||| ||||| ||||||| || || || Sbjct: 1403 gccaggagaaccccagggttcacaggagttgatctgcagaatctgatgaacgaagcagct 1462 Query: 278 atccttgccgctcgtcgtgatctgaaggagataagcaaggacgagatctctgacgctctg 337 || ||||| || | ||||| || || || ||||| || || ||||| |||| || || Sbjct: 1463 attcttgctgccaggcgtgacctcaaagaaataagtaaagatgagatagctgatgcgctt 1522 Query: 338 gagaggatcattgccgggcctgagaagaagaatgcagttgtttcagaacagaagaggaag 397 || ||||||||||| || || || ||||| ||||| ||||| |||||| |||||| ||| Sbjct: 1523 gaaaggatcattgctggaccagaaaagaaaaatgccgttgtctcagaagagaagaagaaa 1582 Query: 398 cttgtggcttaccatgaggctggacatgccctcgtcggtgccctgatgcctgaatatgac 457 | || || || ||||||||||| ||||| | || ||||| ||||||||||||||||| Sbjct: 1583 ttagtagcctatcatgaggctggccatgctttagtgggtgctttgatgcctgaatatgac 1642 Query: 458 cctgttgccaagatttccatcattcctcgaggtcaggctggtggtctcacgttctttgct 517 ||||| |||||||| || || || ||||| || || |||||||||||||| || |||||| Sbjct: 1643 cctgtagccaagatatctattatacctcgtggccaagctggtggtctcaccttttttgct 1702 Query: 518 ccaagcgaagagaggctcgagtctggactgtacagcaggagctacctagagaaccaaatg 577 || |||||||||||||| ||||||||| ||||||| || |||||| | ||||| || ||| Sbjct: 1703 cctagcgaagagaggcttgagtctggattgtacagtagaagctacttggagaatcagatg 1762 Query: 578 gctgtggcacttggtggcagggttg 602 || || |||||||| || ||||||| Sbjct: 1763 gcggttgcacttggaggaagggttg 1787
>gb|BT009112.1| Triticum aestivum clone wl1.pk0008.c2:fis, full insert mRNA sequence Length = 654 Score = 127 bits (64), Expect = 5e-26 Identities = 67/68 (98%) Strand = Plus / Plus Query: 535 cgagtctggactgtacagcaggagctacctagagaaccaaatggctgtggcacttggtgg 594 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 cgagtctggactatacagcaggagctacctagagaaccaaatggctgtggcacttggtgg 60 Query: 595 cagggttg 602 |||||||| Sbjct: 61 cagggttg 68
>dbj|AB023032.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K5J14 Length = 59762 Score = 115 bits (58), Expect = 2e-22 Identities = 151/182 (82%) Strand = Plus / Plus Query: 413 gaggctggacatgccctcgtcggtgccctgatgcctgaatatgaccctgttgccaagatt 472 |||||||| ||||| | || ||||| || ||||| || ||||| || || |||||||| Sbjct: 42899 gaggctgggcatgctttagttggtgcacttatgccggagtatgatccagtggccaagata 42958 Query: 473 tccatcattcctcgaggtcaggctggtggtctcacgttctttgctccaagcgaagagagg 532 || || ||||| || || || |||||||| ||||| || || ||||| |||||||||||| Sbjct: 42959 tcgattattccacgtggccaagctggtgggctcacctttttcgctcctagcgaagagagg 43018 Query: 533 ctcgagtctggactgtacagcaggagctacctagagaaccaaatggctgtggcacttggt 592 || ||||| ||| |||| ||||| |||||||| ||||||||||||||||| ||||||||| Sbjct: 43019 ctagagtccggattgtatagcagaagctaccttgagaaccaaatggctgttgcacttggt 43078 Query: 593 gg 594 || Sbjct: 43079 gg 43080 Score = 115 bits (58), Expect = 2e-22 Identities = 124/146 (84%) Strand = Plus / Plus Query: 233 ggtttcaccggtgctgatcttcagaacttgatgaatgaggctgccatccttgccgctcgt 292 |||||||| ||||||||| | |||||| |||||||||| ||||| || ||||| ||| | Sbjct: 42638 ggtttcactggtgctgatttgcagaacctgatgaatgaagctgcgattcttgctgctaga 42697 Query: 293 cgtgatctgaaggagataagcaaggacgagatctctgacgctctggagaggatcattgcc 352 ||||| || ||||||||||||||||| || || ||||| ||||| |||||||||||||| Sbjct: 42698 cgtgagcttaaggagataagcaaggatgaaatatctgatgctcttgagaggatcattgct 42757 Query: 353 gggcctgagaagaagaatgcagttgt 378 || ||||| |||||||| || ||||| Sbjct: 42758 ggacctgaaaagaagaacgctgttgt 42783
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 81.8 bits (41), Expect = 2e-12 Identities = 95/113 (84%) Strand = Plus / Minus Query: 401 gtggcttaccatgaggctggacatgccctcgtcggtgccctgatgcctgaatatgaccct 460 |||||||| || ||||| || ||||||||||||||||| ||||||||||| || ||||| Sbjct: 1951862 gtggcttatcacgaggcaggccatgccctcgtcggtgctctgatgcctgattacgacccc 1951803 Query: 461 gttgccaagatttccatcattcctcgaggtcaggctggtggtctcacgttctt 513 ||| |||||||| ||||||||||| || | || || |||||||||||||| Sbjct: 1951802 gttcaaaagatttcgatcattcctcgcggcaatgccggcggtctcacgttctt 1951750
>emb|BX572100.1| Prochlorococcus marinus MIT9313 complete genome; segment 6/7 Length = 348071 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 467 aagatttccatcattcctcgaggtcaggctggtggtctcacgttctt 513 |||||||||||||||||||| |||||||| ||||||||||| ||||| Sbjct: 154926 aagatttccatcattcctcgtggtcaggcgggtggtctcacattctt 154880
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 413 gaggctggacatgccctcgtcggtgccctgatgcctgaatatgaccctgttgccaagatt 472 |||||||| |||||||| || ||||||||||||||||| || ||||| ||| ||||| Sbjct: 305543 gaggctggccatgcccttgtgggtgccctgatgcctgactacgacccagttcagaagatc 305602 Query: 473 tccatcattcc 483 ||||||||||| Sbjct: 305603 tccatcattcc 305613
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Minus Query: 42 tcatcgtgctcgccgcgaccaacaggccggatgtgcttgactccgcgcttctgcggccag 101 |||||||| |||||||||||||| | || || ||||| || ||||||| |||||||| | Sbjct: 1984109 tcatcgtgatcgccgcgaccaaccgccccgacgtgctcgatcccgcgctgctgcggccgg 1984050 Query: 102 ggcggttcga 111 | |||||||| Sbjct: 1984049 gccggttcga 1984040
>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome Length = 2971517 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 1 gctgctcacggagatggacggcttc 25 ||||||||||||||||||||||||| Sbjct: 1210295 gctgctcacggagatggacggcttc 1210271
>emb|AJ488199.1|PVI488199 Uncultured bacterium gene for putative zinc metallopeptidase, clone 8 Length = 1884 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 1 gctgctcacggagatggacggcttc 25 ||||||||||||||||||||||||| Sbjct: 849 gctgctcacggagatggacggcttc 873
>gb|AE009302.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 72 of 187 of the complete sequence Length = 10906 Score = 46.1 bits (23), Expect = 0.13 Identities = 59/71 (83%) Strand = Plus / Minus Query: 51 tcgccgcgaccaacaggccggatgtgcttgactccgcgcttctgcggccagggcggttcg 110 ||||||| |||||| | || ||||| |||||| ||||||||||||| || || || |||| Sbjct: 2702 tcgccgctaccaaccgtcctgatgttcttgaccccgcgcttctgcgtcccggccgtttcg 2643 Query: 111 atcggcaggtc 121 | || |||||| Sbjct: 2642 accgtcaggtc 2632
>gb|AE008312.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 116 of 187 of the complete sequence Length = 11049 Score = 46.1 bits (23), Expect = 0.13 Identities = 59/71 (83%) Strand = Plus / Plus Query: 51 tcgccgcgaccaacaggccggatgtgcttgactccgcgcttctgcggccagggcggttcg 110 ||||||| |||||| | || ||||| |||||| ||||||||||||| || || || |||| Sbjct: 4241 tcgccgctaccaaccgtcctgatgttcttgaccccgcgcttctgcgtcccggccgtttcg 4300 Query: 111 atcggcaggtc 121 | || |||||| Sbjct: 4301 accgtcaggtc 4311
>ref|XM_782306.1| PREDICTED: Strongylocentrotus purpuratus similar to YME1-like 1 isoform 1 (LOC582354), mRNA Length = 2071 Score = 46.1 bits (23), Expect = 0.13 Identities = 38/43 (88%) Strand = Plus / Plus Query: 216 ttgccagaaggacacctggtttcaccggtgctgatcttcagaa 258 |||||||| ||||| ||||||||| || |||||||||||||| Sbjct: 620 ttgccagagggacagttggtttcacaggggctgatcttcagaa 662
>emb|BX572092.1| Prochlorococcus marinus MED4 complete genome; segment 3/5 Length = 348178 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 216 ttgccagaaggacacctggtttcaccggtgctgat 250 |||| ||||||||||||||||| ||||| |||||| Sbjct: 5936 ttgcaagaaggacacctggttttaccggagctgat 5902
>emb|BX569689.1| Synechococcus sp. WH8102 complete genome; segment 1/7 Length = 348764 Score = 46.1 bits (23), Expect = 0.13 Identities = 71/87 (81%) Strand = Plus / Plus Query: 239 accggtgctgatcttcagaacttgatgaatgaggctgccatccttgccgctcgtcgtgat 298 |||||||||||||| ||| || ||||||||||||||||||| || || ||||| || Sbjct: 303834 accggtgctgatctggccaacctgctgaatgaggctgccatcctggctgcccgtcgcgaa 303893 Query: 299 ctgaaggagataagcaaggacgagatc 325 |||| ||| | ||||| ||||||||| Sbjct: 303894 ctgaccgaggtcagcaacgacgagatc 303920
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 46.1 bits (23), Expect = 0.13 Identities = 50/59 (84%) Strand = Plus / Minus Query: 401 gtggcttaccatgaggctggacatgccctcgtcggtgccctgatgcctgaatatgaccc 459 ||||||||||| || ||||| || ||| | ||||||||| |||||||||| || ||||| Sbjct: 1324762 gtggcttaccacgaagctggtcacgccttggtcggtgccttgatgcctgactacgaccc 1324704
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome Length = 2695903 Score = 46.1 bits (23), Expect = 0.13 Identities = 50/59 (84%) Strand = Plus / Plus Query: 401 gtggcttaccatgaggctggacatgccctcgtcggtgccctgatgcctgaatatgaccc 459 ||||||||||| || ||||| || ||| | ||||||||| |||||||||| || ||||| Sbjct: 296120 gtggcttaccacgaagctggtcacgccttggtcggtgccttgatgcctgactacgaccc 296178
>emb|BX572090.1| Prochlorococcus marinus MED4 complete genome; segment 1/5 Length = 349742 Score = 44.1 bits (22), Expect = 0.52 Identities = 46/54 (85%) Strand = Plus / Minus Query: 197 gatgtggactttgataaggttgccagaaggacacctggtttcaccggtgctgat 250 ||||| ||| ||||||||||||| ||||| || ||||| || || ||||||||| Sbjct: 220557 gatgtagaccttgataaggttgcgagaagaactcctgggtttacaggtgctgat 220504
>emb|AL939124.1|SCO939124 Streptomyces coelicolor A3(2) complete genome; segment 21/29 Length = 308050 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 5 ctcacggagatggacggcttctccgg 30 ||||| |||||||||||||||||||| Sbjct: 112040 ctcaccgagatggacggcttctccgg 112065
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 3 tgctcacggagatggacggctt 24 |||||||||||||||||||||| Sbjct: 4405 tgctcacggagatggacggctt 4384
>gb|AE010377.1| Methanopyrus kandleri AV19 section 76 of 157 of the complete genome Length = 4406 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1 gctgctcacggagatggacggcttc 25 ||||||| ||||||||||||||||| Sbjct: 3938 gctgctcgcggagatggacggcttc 3962
>gb|AC002511.1| Homo sapiens chromosome 19 clone PC28130, complete sequence Length = 98713 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 397 gcttgtggcttaccatgaggc 417 ||||||||||||||||||||| Sbjct: 55731 gcttgtggcttaccatgaggc 55711
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 48 tgctcgccgcgaccaacaggc 68 ||||||||||||||||||||| Sbjct: 145980 tgctcgccgcgaccaacaggc 146000
>ref|XM_500490.1| Yarrowia lipolytica CLIB122, YALI0B04334g predicted mRNA Length = 3309 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 314 aaggacgagatctctgacgctctgg 338 |||||||||||| |||||||||||| Sbjct: 1717 aaggacgagatcgctgacgctctgg 1741
>gb|BC044464.1| Danio rerio nuclear VCP-like, mRNA (cDNA clone MGC:55732 IMAGE:3816242), complete cds Length = 2657 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 gctgctcacggagatggacgg 21 ||||||||||||||||||||| Sbjct: 2057 gctgctcacggagatggacgg 2077
>ref|NM_213484.1| Danio rerio nuclear VCP-like (nvl), mRNA Length = 2657 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 gctgctcacggagatggacgg 21 ||||||||||||||||||||| Sbjct: 2057 gctgctcacggagatggacgg 2077
>ref|XM_697576.1| PREDICTED: Danio rerio hypothetical protein LOC554702 (LOC554702), mRNA Length = 2640 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 gctgctcacggagatggacgg 21 ||||||||||||||||||||| Sbjct: 2057 gctgctcacggagatggacgg 2077
>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome Length = 2593857 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Minus Query: 407 taccatgaggctggacatgccctcgtcggtgccctgatgcc 447 ||||||||||| || |||||||| || || ||||||||||| Sbjct: 111477 taccatgaggcgggtcatgcccttgtgggcgccctgatgcc 111437
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica Length = 3066374 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 314 aaggacgagatctctgacgctctgg 338 |||||||||||| |||||||||||| Sbjct: 581282 aaggacgagatcgctgacgctctgg 581306
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 42.1 bits (21), Expect = 2.1 Identities = 54/65 (83%) Strand = Plus / Minus Query: 53 gccgcgaccaacaggccggatgtgcttgactccgcgcttctgcggccagggcggttcgat 112 |||||||||||| |||| || ||||| ||| | ||| | || ||||| ||||||||||| Sbjct: 2726406 gccgcgaccaaccggcctgacgtgctggaccctgcggtcctccggccggggcggttcgac 2726347 Query: 113 cggca 117 ||||| Sbjct: 2726346 cggca 2726342 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1 gctgctcacggagatggacggcttc 25 ||||||||| ||||||||||||||| Sbjct: 147779 gctgctcaccgagatggacggcttc 147803
>ref|NM_115254.3| Arabidopsis thaliana binding / transporter AT3G53940 mRNA, complete cds Length = 1542 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 tgagaagaagaatgcagttg 377 |||||||||||||||||||| Sbjct: 1089 tgagaagaagaatgcagttg 1108
>gb|CP000108.1| Chlorobium chlorochromatii CaD3, complete genome Length = 2572079 Score = 40.1 bits (20), Expect = 8.2 Identities = 38/44 (86%) Strand = Plus / Plus Query: 71 gatgtgcttgactccgcgcttctgcggccagggcggttcgatcg 114 ||||||||||| || |||||| |||| |||||||| || ||||| Sbjct: 9289 gatgtgcttgattcggcgcttttgcgtccagggcgttttgatcg 9332
>gb|CP000141.1| Carboxydothermus hydrogenoformans Z-2901, complete genome Length = 2401520 Score = 40.1 bits (20), Expect = 8.2 Identities = 35/40 (87%) Strand = Plus / Plus Query: 397 gcttgtggcttaccatgaggctggacatgccctcgtcggt 436 |||||| |||||||||||||| || |||||| | |||||| Sbjct: 181273 gcttgtagcttaccatgaggcgggccatgccatggtcggt 181312
>gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, complete sequence Length = 1130447 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 2 ctgctcacggagatggacggcttc 25 |||||||| ||||||||||||||| Sbjct: 100442 ctgctcaccgagatggacggcttc 100465
>gb|CP000127.1| Nitrosococcus oceani ATCC 19707, complete genome Length = 3481691 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 395 aagcttgtggcttaccatga 414 |||||||||||||||||||| Sbjct: 301864 aagcttgtggcttaccatga 301883
>gb|AC139758.3| Mus musculus BAC clone RP23-367E7 from chromosome 14, complete sequence Length = 210969 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 537 agtctggactgtacagcaggagct 560 |||||| ||||||||||||||||| Sbjct: 68432 agtctgcactgtacagcaggagct 68409
>gb|AC091324.10| Mus musculus chromosome 7, clone RP23-7G1, complete sequence Length = 225556 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 ttgaggttcactccagagga 181 |||||||||||||||||||| Sbjct: 84075 ttgaggttcactccagagga 84094
>gb|BT011963.1| Arabidopsis thaliana At3g53940 mRNA sequence Length = 1095 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 tgagaagaagaatgcagttg 377 |||||||||||||||||||| Sbjct: 881 tgagaagaagaatgcagttg 900
>ref|XM_842897.1| Leishmania major strain Friedlin ATPase (LMJ_0292) partial mRNA Length = 1971 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 2 ctgctcacggagatggacggcttc 25 |||||||| ||||||||||||||| Sbjct: 1552 ctgctcaccgagatggacggcttc 1575
>emb|AL591788.1|SME591788 Sinorhizobium meliloti 1021 complete chromosome; segment 7/12 Length = 306250 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 411 atgaggctggacatgccctc 430 |||||||||||||||||||| Sbjct: 54117 atgaggctggacatgccctc 54136
>ref|XM_499951.1| Yarrowia lipolytica CLIB122, YALI0A10615g predicted mRNA Length = 2403 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 400 tgtggcttaccatgaggctggacatgcc 427 |||||| |||||||||||||| |||||| Sbjct: 1773 tgtggcctaccatgaggctggccatgcc 1800
>gb|AF259761.1| Ovis aries microsatellite MNS-89 sequence Length = 995 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 436 tgccctgatgcctgaatatg 455 |||||||||||||||||||| Sbjct: 798 tgccctgatgcctgaatatg 817
>gb|AE008912.1| Salmonella typhimurium LT2, section 216 of 220 of the complete genome Length = 20216 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 437 gccctgatgcctgaatatga 456 |||||||||||||||||||| Sbjct: 4815 gccctgatgcctgaatatga 4796
>emb|AL627284.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18, complete chromosome; segment 20/20 Length = 88037 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 437 gccctgatgcctgaatatga 456 |||||||||||||||||||| Sbjct: 3877 gccctgatgcctgaatatga 3858
>emb|AL132960.2|ATF5K20 Arabidopsis thaliana DNA chromosome 3, BAC clone F5K20 Length = 119407 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 358 tgagaagaagaatgcagttg 377 |||||||||||||||||||| Sbjct: 73981 tgagaagaagaatgcagttg 73962
>gb|AF236051.1| California sea lion herpesvirus terminase gene, partial cds Length = 448 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 gaagaggaagcttgtggctt 407 |||||||||||||||||||| Sbjct: 109 gaagaggaagcttgtggctt 90
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 40.1 bits (20), Expect = 8.2 Identities = 38/44 (86%) Strand = Plus / Plus Query: 77 cttgactccgcgcttctgcggccagggcggttcgatcggcaggt 120 |||||||||||| | |||||||| || || ||||| |||||||| Sbjct: 2168295 cttgactccgcgttgctgcggccgggccgcttcgaccggcaggt 2168338
>gb|AY093262.1| Arabidopsis thaliana putative protein (F5K20.24) mRNA, complete cds Length = 1169 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 tgagaagaagaatgcagttg 377 |||||||||||||||||||| Sbjct: 884 tgagaagaagaatgcagttg 903
>gb|AY062478.1| Arabidopsis thaliana putative protein (F5K20.24) mRNA, complete cds Length = 1397 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 tgagaagaagaatgcagttg 377 |||||||||||||||||||| Sbjct: 1089 tgagaagaagaatgcagttg 1108
>gb|AC008632.6|AC008632 Homo sapiens chromosome 5 clone CTB-164N12, complete sequence Length = 112687 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 567 agaaccaaatggctgtggca 586 |||||||||||||||||||| Sbjct: 59752 agaaccaaatggctgtggca 59771
>gb|AF193618.1|AF193618 California sea lion herpesvirus terminase gene, partial cds Length = 375 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 gaagaggaagcttgtggctt 407 |||||||||||||||||||| Sbjct: 36 gaagaggaagcttgtggctt 17
>emb|BX822250.1|CNS0A70P Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB23ZB02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1400 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 tgagaagaagaatgcagttg 377 |||||||||||||||||||| Sbjct: 1044 tgagaagaagaatgcagttg 1063
>emb|BX824565.1|CNS0A4VO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH56ZE10 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1499 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 tgagaagaagaatgcagttg 377 |||||||||||||||||||| Sbjct: 1056 tgagaagaagaatgcagttg 1075
>gb|AC008663.6|AC008663 Homo sapiens chromosome 5 clone CTB-33O18, complete sequence Length = 142859 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 567 agaaccaaatggctgtggca 586 |||||||||||||||||||| Sbjct: 132413 agaaccaaatggctgtggca 132432
>gb|AC068279.6| Homo sapiens BAC clone RP11-153P14 from 2, complete sequence Length = 135351 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 460 tgttgccaagatttccatca 479 |||||||||||||||||||| Sbjct: 6697 tgttgccaagatttccatca 6678
>gb|AE004548.1| Pseudomonas aeruginosa PAO1, section 109 of 529 of the complete genome Length = 10054 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 tcatcgtgctcgccgcgacc 61 |||||||||||||||||||| Sbjct: 8703 tcatcgtgctcgccgcgacc 8722
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 tggcgaaggatgtggacttt 208 |||||||||||||||||||| Sbjct: 1272758 tggcgaaggatgtggacttt 1272777
>ref|XM_345541.2| PREDICTED: Rattus norvegicus similar to Ubiquitin carboxyl-terminal hydrolase isozyme L3 (UCH-L3) (Ubiquitin thiolesterase L3) (LOC366382), mRNA Length = 687 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 379 ttcagaacagaagaggaagc 398 |||||||||||||||||||| Sbjct: 199 ttcagaacagaagaggaagc 218
>gb|AC017002.4| Homo sapiens BAC clone RP11-68E19 from 2, complete sequence Length = 205662 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 460 tgttgccaagatttccatca 479 |||||||||||||||||||| Sbjct: 109069 tgttgccaagatttccatca 109088
>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome Length = 3573470 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 93 tgcggccagggcggttcgatcggcaggt 120 |||||||||| ||||||||||| ||||| Sbjct: 697074 tgcggccaggacggttcgatcgccaggt 697101 Score = 40.1 bits (20), Expect = 8.2 Identities = 47/56 (83%) Strand = Plus / Plus Query: 401 gtggcttaccatgaggctggacatgccctcgtcggtgccctgatgcctgaatatga 456 |||||||||||||| ||||| || ||| | || ||||| |||||||||| ||||| Sbjct: 472337 gtggcttaccatgaagctggccacgccttggtgggtgctttgatgcctgattatga 472392
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Length = 3131724 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 2 ctgctcacggagatggacggcttc 25 |||||| ||||||||||||||||| Sbjct: 2821080 ctgctctcggagatggacggcttc 2821103
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 gcgcttctgcggccagggcg 105 |||||||||||||||||||| Sbjct: 94710 gcgcttctgcggccagggcg 94729
>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome Length = 4791961 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 437 gccctgatgcctgaatatga 456 |||||||||||||||||||| Sbjct: 4707801 gccctgatgcctgaatatga 4707782
>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome Length = 4755700 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 437 gccctgatgcctgaatatga 456 |||||||||||||||||||| Sbjct: 4668541 gccctgatgcctgaatatga 4668522
>gb|AY627304.1| Haloferax volcanii DS2 proteasome-activating nucleotidase B (panB) gene, complete cds Length = 1239 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 2 ctgctcacggagatggacggcttc 25 |||||| ||||||||||||||||| Sbjct: 835 ctgctctcggagatggacggcttc 858
>emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB122 of Yarrowia lipolytica Length = 2303261 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 400 tgtggcttaccatgaggctggacatgcc 427 |||||| |||||||||||||| |||||| Sbjct: 1102899 tgtggcctaccatgaggctggccatgcc 1102926 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,632,922 Number of Sequences: 3902068 Number of extensions: 4632922 Number of successful extensions: 80521 Number of sequences better than 10.0: 84 Number of HSP's better than 10.0 without gapping: 84 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 79888 Number of HSP's gapped (non-prelim): 629 length of query: 602 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 579 effective length of database: 17,143,297,704 effective search space: 9925969370616 effective search space used: 9925969370616 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
