ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal15n20 |
|---|---|
| Clone Library Name | barley_pub |
>JI23_HORVU (P32024) 23 kDa jasmonate-induced protein| Length = 210 Score = 207 bits (526), Expect(2) = 2e-60 Identities = 98/99 (98%), Positives = 98/99 (98%) Frame = +2 Query: 17 VFGTPISAQTVIATGEYKEPITQKDVADYAMKMINAGGKDVNAQKFVDNLKERYGNGIAV 196 VFGTPISAQTVIATGEYKEPITQKDVADYAMKMINAGGKDVNAQKFVDNLKERYGNGIAV Sbjct: 5 VFGTPISAQTVIATGEYKEPITQKDVADYAMKMINAGGKDVNAQKFVDNLKERYGNGIAV 64 Query: 197 KCLLYNATGATLNFAKYNDWHGHIYDTPYPSDIQNGQMG 313 KCLLYNATGATLNFAKYNDWHGHIYDTPYPSDIQNGQ G Sbjct: 65 KCLLYNATGATLNFAKYNDWHGHIYDTPYPSDIQNGQWG 103 Score = 43.5 bits (101), Expect(2) = 2e-60 Identities = 18/19 (94%), Positives = 19/19 (100%) Frame = +3 Query: 303 GKWGAFLHVHPSGAAAGSA 359 G+WGAFLHVHPSGAAAGSA Sbjct: 100 GQWGAFLHVHPSGAAAGSA 118
>BPIL1_HUMAN (Q8N4F0) Bactericidal/permeability-increasing protein-like 1| precursor (Long palate, lung and nasal epithelium carcinoma-associated protein 2) (RYSR) Length = 458 Score = 34.7 bits (78), Expect = 0.059 Identities = 16/41 (39%), Positives = 27/41 (65%) Frame = -2 Query: 175 PLLEVVDELLRVNILTTGVDHLHGIVCNIFLGNGFLILSSG 53 PLL+ ++ LL + I GV +LH + IF+ G++++SSG Sbjct: 413 PLLDHLNALLAMGIALPGVVNLHYVAPEIFVYEGYVVISSG 453
>MURA1_THETN (Q8RD88) UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 (EC| 2.5.1.7) (Enoylpyruvate transferase 1) (UDP-N-acetylglucosamine enolpyruvyl transferase 1) (EPT 1) Length = 415 Score = 31.2 bits (69), Expect = 0.65 Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 3/76 (3%) Frame = -2 Query: 322 RNAPHLPILNI*WVGCIIDMAVPIVVLSKVQSGTSGIVEEAFYSYSVTVPLLEVVDELLR 143 +N + I + + G DM ++ + V GTS I+E F + + V L+ + ++ Sbjct: 286 KNYKAVDIKTLPYPGFPTDMQAQMMAMMTVAKGTSVIIETVFENRFMHVSELKRMGANIK 345 Query: 142 V---NILTTGVDHLHG 104 + + + TGVDHL G Sbjct: 346 IEGRSAMITGVDHLTG 361
>JIPH_ATRCA (P42764) Jasmonate-induced protein homolog| Length = 185 Score = 30.0 bits (66), Expect = 1.5 Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 7/74 (9%) Frame = +2 Query: 107 MKMINAGGKDVNAQKFVDNLKERYGN-GIAVKCL------LYNATGATLNFAKYNDWHGH 265 M A G +K VD + E+ N G+ V+ + N T ++ F + ++W G Sbjct: 1 MASTQAMGMTEQQKKSVDEMVEKATNMGVNVQAQNSAVVSMINQTNVSMTFNENHNWSGS 60 Query: 266 IYDTPYPSDIQNGQ 307 + T YP I Q Sbjct: 61 VVGTGYPKSIPTKQ 74
>CYAA_BORPE (P15318) Bifunctional hemolysin-adenylate cyclase precursor| (Cyclolysin) (ACT) (AC-HLY) [Contains: Calmodulin-sensitive adenylate cyclase (EC 4.6.1.1) (ATP pyrophosphate-lyase) (Adenylyl cyclase); Hemolysin] Length = 1706 Score = 30.0 bits (66), Expect = 1.5 Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 7/71 (9%) Frame = +2 Query: 17 VFGTPISAQTVIATGEY-------KEPITQKDVADYAMKMINAGGKDVNAQKFVDNLKER 175 V G P++ T + TG ++PI +K DYA K+ GG +K + E+ Sbjct: 690 VVGAPVAVVTSLLTGALNGILRGVQQPIIEKLANDYARKIDELGGPQAYFEKNLQARHEQ 749 Query: 176 YGNGIAVKCLL 208 N ++ +L Sbjct: 750 LANSDGLRKML 760
>CYAA_BORBR (Q57506) Bifunctional hemolysin-adenylate cyclase precursor| (Cyclolysin) (ACT) (AC-HLY) [Contains: Calmodulin-sensitive adenylate cyclase (EC 4.6.1.1) (ATP pyrophosphate-lyase) (Adenylyl cyclase); Hemolysin] Length = 1706 Score = 30.0 bits (66), Expect = 1.5 Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 7/71 (9%) Frame = +2 Query: 17 VFGTPISAQTVIATGEY-------KEPITQKDVADYAMKMINAGGKDVNAQKFVDNLKER 175 V G P++ T + TG ++PI +K DYA K+ GG +K + E+ Sbjct: 690 VVGAPVAVVTSLLTGALNGILRGVQQPIIEKLANDYARKIDELGGPQAYFEKNLQARHEQ 749 Query: 176 YGNGIAVKCLL 208 N ++ +L Sbjct: 750 LANSDGLRKML 760
>PRSA_BACHD (Q9KDN4) Foldase protein prsA precursor (EC 5.2.1.8)| Length = 333 Score = 29.6 bits (65), Expect = 1.9 Identities = 12/34 (35%), Positives = 18/34 (52%) Frame = +2 Query: 89 DVADYAMKMINAGGKDVNAQKFVDNLKERYGNGI 190 D ++ G +++ +FVD LKERYG I Sbjct: 24 DAGSSGQAVVEVDGHEISDAEFVDMLKERYGEAI 57
>SCRK_STRMU (Q07211) Fructokinase (EC 2.7.1.4)| Length = 293 Score = 29.6 bits (65), Expect = 1.9 Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 13/62 (20%) Frame = +2 Query: 176 YGNGIA---VKCLLYNATGATLNFAKYNDWH----------GHIYDTPYPSDIQNGQMGC 316 YG IA VK L+Y G + + GH+Y P+P+D+ +G +G Sbjct: 114 YGETIARSNVKSLVYYTIGTGIGAGTIQNGEFIGGMGHTEAGHVYMAPHPNDVHHGFVGT 173 Query: 317 IP 322 P Sbjct: 174 CP 175
>BPIL1_MOUSE (Q8C1E1) Bactericidal/permeability-increasing protein-like 1| precursor Length = 462 Score = 29.3 bits (64), Expect = 2.5 Identities = 12/41 (29%), Positives = 26/41 (63%) Frame = -2 Query: 175 PLLEVVDELLRVNILTTGVDHLHGIVCNIFLGNGFLILSSG 53 PLL+ ++ LL + ++ V +LH + + + G++++SSG Sbjct: 417 PLLDHLNALLGMGVVLPRVHNLHYVHSEVLVREGYVVVSSG 457
>ASO_TOBAC (Q40588) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase)| (ASO) Length = 578 Score = 29.3 bits (64), Expect = 2.5 Identities = 15/55 (27%), Positives = 24/55 (43%), Gaps = 7/55 (12%) Frame = +2 Query: 131 KDVNAQKFVDNLKERYGNGI-------AVKCLLYNATGATLNFAKYNDWHGHIYD 274 KD + K N YGNG+ + +L NA + ++ + WH H +D Sbjct: 426 KDYDVLKQAPNSNSTYGNGVYMLKFNTTIDIILQNANALAKDVSEIHPWHLHGHD 480
>WISP1_RAT (Q99PP0) WNT1-inducible signaling pathway protein 1 precursor| (WISP-1) (ELM-1) Length = 367 Score = 28.9 bits (63), Expect = 3.2 Identities = 18/65 (27%), Positives = 27/65 (41%), Gaps = 4/65 (6%) Frame = +2 Query: 167 KERYGNGIAVKCLLYNATGATLNFAKYNDWHGHIYDTPYPSDIQNGQMGCIP----PRPP 334 + RY G+ C G L+ +Y + + Y +G +GC P PRPP Sbjct: 107 RPRYAIGV---CAQVVGVGCVLDGVRYTNGESFQPNCRYNCTCIDGTVGCTPLCLSPRPP 163 Query: 335 KWSCR 349 + CR Sbjct: 164 RLWCR 168
>WISP1_MOUSE (O54775) WNT1-inducible signaling pathway protein 1 precursor| (WISP-1) (ELM-1) Length = 367 Score = 28.9 bits (63), Expect = 3.2 Identities = 18/65 (27%), Positives = 27/65 (41%), Gaps = 4/65 (6%) Frame = +2 Query: 167 KERYGNGIAVKCLLYNATGATLNFAKYNDWHGHIYDTPYPSDIQNGQMGCIP----PRPP 334 + RY G+ C G L+ +Y + + Y +G +GC P PRPP Sbjct: 107 RPRYAIGV---CAQVVGVGCVLDGVRYTNGESFQPNCRYNCTCIDGTVGCTPLCLSPRPP 163 Query: 335 KWSCR 349 + CR Sbjct: 164 RLWCR 168
>CDC27_YEAST (P38042) Anaphase-promoting complex subunit CDC27 (Cell division| control protein 27) (Anaphase-promoting complex subunit 3) Length = 758 Score = 28.9 bits (63), Expect = 3.2 Identities = 10/28 (35%), Positives = 16/28 (57%) Frame = +2 Query: 263 HIYDTPYPSDIQNGQMGCIPPRPPKWSC 346 H++D S++ NG M +P +P W C Sbjct: 518 HLHDKVKSSNLANGLMDTMPNKPETWCC 545
>MAGI2_RAT (O88382) Membrane-associated guanylate kinase, WW and PDZ| domain-containing protein 2 (Membrane-associated guanylate kinase inverted 2) (MAGI-2) (Atrophin-1-interacting protein 1) (Synaptic scaffolding molecule) (S-SCAM) Length = 1277 Score = 28.9 bits (63), Expect = 3.2 Identities = 24/97 (24%), Positives = 43/97 (44%), Gaps = 11/97 (11%) Frame = +2 Query: 92 VADYAMKMINAGGKDVNAQKFVDNLKERYGNGIAVKCLLYNATG---------ATLNFAK 244 V D +++ +D+ + ++ +K G V+ LL TG ++L+ Sbjct: 1184 VGDQIIEINGESTRDMTHARAIELIKS---GGRRVRLLLKRGTGQVPEYGMVPSSLSMCM 1240 Query: 245 YNDWHG--HIYDTPYPSDIQNGQMGCIPPRPPKWSCR 349 +D HG + Y +P D N G +P PP+ +CR Sbjct: 1241 KSDKHGSPYFYLLGHPKDTTNPTPGALPLPPPQ-ACR 1276
>Y996_METJA (Q58403) Hypothetical protein MJ0996| Length = 451 Score = 28.5 bits (62), Expect = 4.2 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Frame = +2 Query: 89 DVADYAMKMINAGGKDVNAQKF--VDNLKERYGNGIAVKCLLYNATG 223 +V DYA IN G + K ++ + +GNG+AV+ L N G Sbjct: 12 EVGDYADIRINFGESNTITLKDGKIEEISSGFGNGVAVRVLYKNGWG 58
>RPIA_SYNY3 (Q55766) Ribose-5-phosphate isomerase A (EC 5.3.1.6)| (Phosphoriboisomerase A) (PRI) Length = 235 Score = 28.1 bits (61), Expect = 5.5 Identities = 20/67 (29%), Positives = 26/67 (38%), Gaps = 13/67 (19%) Frame = +2 Query: 17 VFGTPISAQTVIATGEYKEPITQKDVADY-------------AMKMINAGGKDVNAQKFV 157 V G P S Q + +Y P+T DVAD +I GG +K V Sbjct: 55 VVGIPTSFQAEVLARKYGIPLTTLDVADRIDIAIDGADEVDPQKNLIKGGGAAHTREKIV 114 Query: 158 DNLKERY 178 D L E + Sbjct: 115 DALAETF 121
>SYL_MYCPU (Q98RB6) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)| (LeuRS) Length = 807 Score = 28.1 bits (61), Expect = 5.5 Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 11/70 (15%) Frame = +2 Query: 20 FGTPISAQTVIATGEYKEPITQKDVADYAMKMINAG-----GKDVNA--QKFVDN----L 166 FG P + Q I+TG TQK++A + ++ + G K+VN KF + Sbjct: 79 FGLP-AEQYAISTGNNPNEFTQKNIATFKKQIKSLGLSYDFDKEVNTTDPKFYEQTQWIF 137 Query: 167 KERYGNGIAV 196 KE Y G+AV Sbjct: 138 KELYKKGLAV 147
>DPOG_SCHPO (Q12704) DNA polymerase gamma (EC 2.7.7.7) (Mitochondrial DNA| polymerase catalytic subunit) Length = 1018 Score = 28.1 bits (61), Expect = 5.5 Identities = 16/44 (36%), Positives = 23/44 (52%) Frame = -1 Query: 323 EECTPFAHSEYLMGRVYHRYGRANRCT*QSSKWHQWHCRGGILQ 192 EE T ++ Y+ +V H+ G RC SK +Q + GILQ Sbjct: 537 EEDTKLDYNNYIFFKVPHKDGPEARCGSPLSKSYQRYFEEGILQ 580
>S26A1_HUMAN (Q9H2B4) Sulfate anion transporter 1 (SAT-1) (Solute carrier family| 26 member 1) Length = 701 Score = 28.1 bits (61), Expect = 5.5 Identities = 18/71 (25%), Positives = 35/71 (49%) Frame = -2 Query: 271 IDMAVPIVVLSKVQSGTSGIVEEAFYSYSVTVPLLEVVDELLRVNILTTGVDHLHGIVCN 92 I +A + +++ + G++ F S ++ PLL+ V ILT+ + HL G+ Sbjct: 178 IRVATALTLMTGLYQVLMGVLRLGFVSAYLSQPLLDGFAMGASVTILTSQLKHLLGVRIP 237 Query: 91 IFLGNGFLILS 59 G G ++L+ Sbjct: 238 RHQGPGMVVLT 248
>ADH_DRONI (Q00672) Alcohol dehydrogenase (EC 1.1.1.1)| Length = 253 Score = 28.1 bits (61), Expect = 5.5 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 7/37 (18%) Frame = -2 Query: 211 VEEAFYSYSVTVPLLE-------VVDELLRVNILTTG 122 V FYSY VTVPL E + D+L V++L G Sbjct: 54 VTVTFYSYDVTVPLAETKKLLKTIFDKLKTVDLLING 90
>PLUNC_BOVIN (Q8SPU5) Protein Plunc precursor (Palate lung and nasal epithelium| clone protein) Length = 255 Score = 27.7 bits (60), Expect = 7.2 Identities = 17/64 (26%), Positives = 33/64 (51%) Frame = -2 Query: 265 MAVPIVVLSKVQSGTSGIVEEAFYSYSVTVPLLEVVDELLRVNILTTGVDHLHGIVCNIF 86 + +P+ ++ V++ G + + ++TV LL V DE V+++ H G + IF Sbjct: 131 VTIPLGMILNVKTSLVGSLLKLAVKLNITVELLAVTDEQKHVHLVVGNCTHSPGSL-QIF 189 Query: 85 LGNG 74 L +G Sbjct: 190 LLDG 193
>RBL_METAC (Q8THG2) Ribulose bisphosphate carboxylase (EC 4.1.1.39) (RuBisCO)| Length = 428 Score = 27.7 bits (60), Expect = 7.2 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 3/38 (7%) Frame = +3 Query: 255 GTAISMIHPTHQIFR---MGKWGAFLHVHPSGAAAGSA 359 G A +MI + IF + ++G +H HP G AAG+A Sbjct: 356 GLAPTMIPDLYSIFGKEVIMQFGGGIHAHPMGTAAGAA 393
>FZD4_RAT (Q9QZH0) Frizzled 4 precursor (Frizzled-4) (Fz-4) (rFz4)| Length = 538 Score = 27.7 bits (60), Expect = 7.2 Identities = 9/21 (42%), Positives = 13/21 (61%) Frame = -1 Query: 77 WVPYTLQWLSPSALKWGYQTL 15 WV TL W + LKWG++ + Sbjct: 321 WVILTLTWFLAAGLKWGHEAI 341
>ALF_MYCGE (P47269) Fructose-bisphosphate aldolase (EC 4.1.2.13)| Length = 288 Score = 27.7 bits (60), Expect = 7.2 Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 6/95 (6%) Frame = -2 Query: 313 PHLPILNI*WVGCIIDMA----VPIVVLSKVQSGTSGIVEEAFYSYSVTVPLLEVVDELL 146 PH+ I N W ++ A PI+V V G + YSV +PL++ + E L Sbjct: 20 PHININNYEWAKAVLTAANQANSPIIV--SVSEGALKYMS----GYSVVIPLVKGLIESL 73 Query: 145 RVNI-LTTGVDHLHGIVCNIFLGNGF-LILSSGYH 47 V + +T +DH C L GF ++ G H Sbjct: 74 SVKVPVTLHLDHGSYDACIQALQAGFSSVMFDGSH 108
>FZD4_XENLA (Q9PT62) Frizzled 4 precursor (Frizzled-4) (Fz-4) (Xfz4)| Length = 523 Score = 27.7 bits (60), Expect = 7.2 Identities = 9/21 (42%), Positives = 13/21 (61%) Frame = -1 Query: 77 WVPYTLQWLSPSALKWGYQTL 15 WV TL W + LKWG++ + Sbjct: 306 WVILTLTWFLAAGLKWGHEAI 326
>FZD4_CHICK (Q9IA05) Frizzled 4 precursor (Frizzled-4) (Fz-4) (cFz-4)| Length = 525 Score = 27.7 bits (60), Expect = 7.2 Identities = 9/21 (42%), Positives = 13/21 (61%) Frame = -1 Query: 77 WVPYTLQWLSPSALKWGYQTL 15 WV TL W + LKWG++ + Sbjct: 308 WVILTLTWFLAAGLKWGHEAI 328
>FZD4_MOUSE (Q61088) Frizzled 4 precursor (Frizzled-4) (Fz-4) (mFz4)| Length = 537 Score = 27.7 bits (60), Expect = 7.2 Identities = 9/21 (42%), Positives = 13/21 (61%) Frame = -1 Query: 77 WVPYTLQWLSPSALKWGYQTL 15 WV TL W + LKWG++ + Sbjct: 320 WVILTLTWFLAAGLKWGHEAI 340
>FZD4_HUMAN (Q9ULV1) Frizzled 4 precursor (Frizzled-4) (Fz-4) (hFz4) (FzE4)| Length = 537 Score = 27.7 bits (60), Expect = 7.2 Identities = 9/21 (42%), Positives = 13/21 (61%) Frame = -1 Query: 77 WVPYTLQWLSPSALKWGYQTL 15 WV TL W + LKWG++ + Sbjct: 320 WVILTLTWFLAAGLKWGHEAI 340
>LDHA_CHICK (P00340) L-lactate dehydrogenase A chain (EC 1.1.1.27) (LDH-A)| Length = 331 Score = 27.3 bits (59), Expect = 9.4 Identities = 20/74 (27%), Positives = 35/74 (47%) Frame = -2 Query: 274 IIDMAVPIVVLSKVQSGTSGIVEEAFYSYSVTVPLLEVVDELLRVNILTTGVDHLHGIVC 95 ++D A ++ L S G+ SV ++ L RV+ ++T V +HGI Sbjct: 233 VVDSAYEVIKLKGYTSWAIGL--------SVADLAETIMKNLRRVHPISTAVKGMHGIKD 284 Query: 94 NIFLGNGFLILSSG 53 ++FL ++ SSG Sbjct: 285 DVFLSVPCVLGSSG 298 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 57,941,100 Number of Sequences: 219361 Number of extensions: 1154902 Number of successful extensions: 3486 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 3444 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3486 length of database: 80,573,946 effective HSP length: 95 effective length of database: 59,734,651 effective search space used: 1433631624 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
