ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | baal16c19 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ234416.1|HVU234416 Hordeum vulgare partial mRNA; clone cMWG0679.uni Length = 228 Score = 426 bits (215), Expect = e-116 Identities = 215/215 (100%) Strand = Plus / Plus Query: 2 gcagcccgtgacatggaagagggcttccagcatggaggaggtcctcagggaggccgatgt 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14 gcagcccgtgacatggaagagggcttccagcatggaggaggtcctcagggaggccgatgt 73 Query: 62 gataagcctgcacccggtgcttgacaagacgacgtaccacctgataaacccagagcggct 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 74 gataagcctgcacccggtgcttgacaagacgacgtaccacctgataaacccagagcggct 133 Query: 122 ggcgatgatgaagaaggaggcagtgctggtgaacgcgagccgtggcccggtgatcgacga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134 ggcgatgatgaagaaggaggcagtgctggtgaacgcgagccgtggcccggtgatcgacga 193 Query: 182 ggttgcactggtggagcacctcaaggctaacccca 216 ||||||||||||||||||||||||||||||||||| Sbjct: 194 ggttgcactggtggagcacctcaaggctaacccca 228
>ref|XM_463779.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1663 Score = 260 bits (131), Expect = 2e-66 Identities = 254/295 (86%) Strand = Plus / Plus Query: 2 gcagcccgtgacatggaagagggcttccagcatggaggaggtcctcagggaggccgatgt 61 |||||| |||||||||||||| || ||| ||||||||| ||||||||||||||||| || Sbjct: 806 gcagcctgtgacatggaagagagccgccaccatggaggatgtcctcagggaggccgacgt 865 Query: 62 gataagcctgcacccggtgcttgacaagacgacgtaccacctgataaacccagagcggct 121 ||| || |||||||| ||| | |||||||| || ||||| ||||||||||| || |||| Sbjct: 866 gattagtctgcaccctgtgttggacaagaccacttaccatctgataaacccggaaaggct 925 Query: 122 ggcgatgatgaagaaggaggcagtgctggtgaacgcgagccgtggcccggtgatcgacga 181 ||| || ||||||||||| || || || ||||| || || || || |||||||| || || Sbjct: 926 ggccatcatgaagaaggaagcggttcttgtgaatgcaagtcgaggaccggtgattgatga 985 Query: 182 ggttgcactggtggagcacctcaaggctaaccccatgttccgtgtcggcctcgatgtttt 241 ||| ||||||||||||||||||||||| |||||||||||||| ||||| || ||||| || Sbjct: 986 ggtagcactggtggagcacctcaaggccaaccccatgttccgcgtcggtcttgatgtgtt 1045 Query: 242 tgaggatgagccttacatgaagccagggctggctgagatgaagaatgccgtcgtc 296 |||||||||||||||||||||||| || || ||||| |||||||||||||||||| Sbjct: 1046 tgaggatgagccttacatgaagcccggcctcgctgacatgaagaatgccgtcgtc 1100
>dbj|AK072105.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013119J12, full insert sequence Length = 2837 Score = 260 bits (131), Expect = 2e-66 Identities = 254/295 (86%) Strand = Plus / Plus Query: 2 gcagcccgtgacatggaagagggcttccagcatggaggaggtcctcagggaggccgatgt 61 |||||| |||||||||||||| || ||| ||||||||| ||||||||||||||||| || Sbjct: 734 gcagcctgtgacatggaagagagccgccaccatggaggatgtcctcagggaggccgacgt 793 Query: 62 gataagcctgcacccggtgcttgacaagacgacgtaccacctgataaacccagagcggct 121 ||| || |||||||| ||| | |||||||| || ||||| ||||||||||| || |||| Sbjct: 794 gattagtctgcaccctgtgttggacaagaccacttaccatctgataaacccggaaaggct 853 Query: 122 ggcgatgatgaagaaggaggcagtgctggtgaacgcgagccgtggcccggtgatcgacga 181 ||| || ||||||||||| || || || ||||| || || || || |||||||| || || Sbjct: 854 ggccatcatgaagaaggaagcggttcttgtgaatgcaagtcgaggaccggtgattgatga 913 Query: 182 ggttgcactggtggagcacctcaaggctaaccccatgttccgtgtcggcctcgatgtttt 241 ||| ||||||||||||||||||||||| |||||||||||||| ||||| || ||||| || Sbjct: 914 ggtagcactggtggagcacctcaaggccaaccccatgttccgcgtcggtcttgatgtgtt 973 Query: 242 tgaggatgagccttacatgaagccagggctggctgagatgaagaatgccgtcgtc 296 |||||||||||||||||||||||| || || ||||| |||||||||||||||||| Sbjct: 974 tgaggatgagccttacatgaagcccggcctcgctgacatgaagaatgccgtcgtc 1028
>dbj|AK067642.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013108J23, full insert sequence Length = 1662 Score = 260 bits (131), Expect = 2e-66 Identities = 254/295 (86%) Strand = Plus / Plus Query: 2 gcagcccgtgacatggaagagggcttccagcatggaggaggtcctcagggaggccgatgt 61 |||||| |||||||||||||| || ||| ||||||||| ||||||||||||||||| || Sbjct: 807 gcagcctgtgacatggaagagagccgccaccatggaggatgtcctcagggaggccgacgt 866 Query: 62 gataagcctgcacccggtgcttgacaagacgacgtaccacctgataaacccagagcggct 121 ||| || |||||||| ||| | |||||||| || ||||| ||||||||||| || |||| Sbjct: 867 gattagtctgcaccctgtgttggacaagaccacttaccatctgataaacccggaaaggct 926 Query: 122 ggcgatgatgaagaaggaggcagtgctggtgaacgcgagccgtggcccggtgatcgacga 181 ||| || ||||||||||| || || || ||||| || || || || |||||||| || || Sbjct: 927 ggccatcatgaagaaggaagcggttcttgtgaatgcaagtcgaggaccggtgattgatga 986 Query: 182 ggttgcactggtggagcacctcaaggctaaccccatgttccgtgtcggcctcgatgtttt 241 ||| ||||||||||||||||||||||| |||||||||||||| ||||| || ||||| || Sbjct: 987 ggtagcactggtggagcacctcaaggccaaccccatgttccgcgtcggtcttgatgtgtt 1046 Query: 242 tgaggatgagccttacatgaagccagggctggctgagatgaagaatgccgtcgtc 296 |||||||||||||||||||||||| || || ||||| |||||||||||||||||| Sbjct: 1047 tgaggatgagccttacatgaagcccggcctcgctgacatgaagaatgccgtcgtc 1101
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 161 bits (81), Expect = 2e-36 Identities = 117/129 (90%) Strand = Plus / Minus Query: 168 ccggtgatcgacgaggttgcactggtggagcacctcaaggctaaccccatgttccgtgtc 227 |||||||| || ||||| ||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 80881 ccggtgattgatgaggtagcactggtggagcacctcaaggccaaccccatgttccgcgtc 80822 Query: 228 ggcctcgatgtttttgaggatgagccttacatgaagccagggctggctgagatgaagaat 287 || || ||||| |||||||||||||||||||||||||| || || ||||| ||||||||| Sbjct: 80821 ggtcttgatgtgtttgaggatgagccttacatgaagcccggcctcgctgacatgaagaat 80762 Query: 288 gccgtcgtc 296 ||||||||| Sbjct: 80761 gccgtcgtc 80753 Score = 65.9 bits (33), Expect = 7e-08 Identities = 51/57 (89%) Strand = Plus / Minus Query: 2 gcagcccgtgacatggaagagggcttccagcatggaggaggtcctcagggaggccga 58 |||||| |||||||||||||| || ||| ||||||||| ||||||||||||||||| Sbjct: 81273 gcagcctgtgacatggaagagagccgccaccatggaggatgtcctcagggaggccga 81217 Score = 52.0 bits (26), Expect = 0.001 Identities = 59/70 (84%) Strand = Plus / Minus Query: 69 ctgcacccggtgcttgacaagacgacgtaccacctgataaacccagagcggctggcgatg 128 |||||||| ||| | |||||||| || ||||| ||||||||||| || ||||||| || Sbjct: 81095 ctgcaccctgtgttggacaagaccacttaccatctgataaacccggaaaggctggccatc 81036 Query: 129 atgaagaagg 138 |||||||||| Sbjct: 81035 atgaagaagg 81026
>dbj|AP005873.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1370C05 Length = 148271 Score = 161 bits (81), Expect = 2e-36 Identities = 117/129 (90%) Strand = Plus / Minus Query: 168 ccggtgatcgacgaggttgcactggtggagcacctcaaggctaaccccatgttccgtgtc 227 |||||||| || ||||| ||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 75490 ccggtgattgatgaggtagcactggtggagcacctcaaggccaaccccatgttccgcgtc 75431 Query: 228 ggcctcgatgtttttgaggatgagccttacatgaagccagggctggctgagatgaagaat 287 || || ||||| |||||||||||||||||||||||||| || || ||||| ||||||||| Sbjct: 75430 ggtcttgatgtgtttgaggatgagccttacatgaagcccggcctcgctgacatgaagaat 75371 Query: 288 gccgtcgtc 296 ||||||||| Sbjct: 75370 gccgtcgtc 75362 Score = 65.9 bits (33), Expect = 7e-08 Identities = 51/57 (89%) Strand = Plus / Minus Query: 2 gcagcccgtgacatggaagagggcttccagcatggaggaggtcctcagggaggccga 58 |||||| |||||||||||||| || ||| ||||||||| ||||||||||||||||| Sbjct: 75882 gcagcctgtgacatggaagagagccgccaccatggaggatgtcctcagggaggccga 75826 Score = 52.0 bits (26), Expect = 0.001 Identities = 59/70 (84%) Strand = Plus / Minus Query: 69 ctgcacccggtgcttgacaagacgacgtaccacctgataaacccagagcggctggcgatg 128 |||||||| ||| | |||||||| || ||||| ||||||||||| || ||||||| || Sbjct: 75704 ctgcaccctgtgttggacaagaccacttaccatctgataaacccggaaaggctggccatc 75645 Query: 129 atgaagaagg 138 |||||||||| Sbjct: 75644 atgaagaagg 75635
>dbj|AP004187.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1435_F07 Length = 139041 Score = 161 bits (81), Expect = 2e-36 Identities = 117/129 (90%) Strand = Plus / Minus Query: 168 ccggtgatcgacgaggttgcactggtggagcacctcaaggctaaccccatgttccgtgtc 227 |||||||| || ||||| ||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 29908 ccggtgattgatgaggtagcactggtggagcacctcaaggccaaccccatgttccgcgtc 29849 Query: 228 ggcctcgatgtttttgaggatgagccttacatgaagccagggctggctgagatgaagaat 287 || || ||||| |||||||||||||||||||||||||| || || ||||| ||||||||| Sbjct: 29848 ggtcttgatgtgtttgaggatgagccttacatgaagcccggcctcgctgacatgaagaat 29789 Query: 288 gccgtcgtc 296 ||||||||| Sbjct: 29788 gccgtcgtc 29780 Score = 65.9 bits (33), Expect = 7e-08 Identities = 51/57 (89%) Strand = Plus / Minus Query: 2 gcagcccgtgacatggaagagggcttccagcatggaggaggtcctcagggaggccga 58 |||||| |||||||||||||| || ||| ||||||||| ||||||||||||||||| Sbjct: 30300 gcagcctgtgacatggaagagagccgccaccatggaggatgtcctcagggaggccga 30244 Score = 52.0 bits (26), Expect = 0.001 Identities = 59/70 (84%) Strand = Plus / Minus Query: 69 ctgcacccggtgcttgacaagacgacgtaccacctgataaacccagagcggctggcgatg 128 |||||||| ||| | |||||||| || ||||| ||||||||||| || ||||||| || Sbjct: 30122 ctgcaccctgtgttggacaagaccacttaccatctgataaacccggaaaggctggccatc 30063 Query: 129 atgaagaagg 138 |||||||||| Sbjct: 30062 atgaagaagg 30053
>dbj|AB060810.1| Bruguiera gymnorhiza HPR mRNA for hydroxypyruvate reductase, complete cds Length = 1576 Score = 69.9 bits (35), Expect = 4e-09 Identities = 65/75 (86%) Strand = Plus / Plus Query: 216 atgttccgtgtcggcctcgatgtttttgaggatgagccttacatgaagccagggctggct 275 |||||||| || ||||| ||||| || ||||| || |||||||||||||||||||| || Sbjct: 905 atgttccgggttggccttgatgtcttcgaggacgaaccttacatgaagccagggcttgcc 964 Query: 276 gagatgaagaatgcc 290 || |||||||||||| Sbjct: 965 gacatgaagaatgcc 979
>emb|X14609.1|CSNDHR Cucumis sativus mRNA for NAPH-dependent hydroxypyruvate reductase (EC 1.1.1.29) Length = 1437 Score = 60.0 bits (30), Expect = 4e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 213 cccatgttccgtgtcggcctcgatgtttttgaggatgagccttacatgaagccagggctg 272 |||||||| || || ||||| ||||||||||||||||| || |||||||| || || || Sbjct: 908 cccatgtttcgagttggccttgatgtttttgaggatgaaccatacatgaaacctggactt 967 Query: 273 gctgagatgaagaa 286 ||||| |||||||| Sbjct: 968 gctgatatgaagaa 981
>gb|AF503361.1| Glycine max clone P42-2 putative NADH-dependent hydroxypyruvate reductase mRNA, complete cds Length = 1414 Score = 60.0 bits (30), Expect = 4e-06 Identities = 69/82 (84%) Strand = Plus / Plus Query: 209 taaccccatgttccgtgtcggcctcgatgtttttgaggatgagccttacatgaagccagg 268 |||||| ||||| || || ||||| ||||| |||||||| ||||| |||||||| || || Sbjct: 906 taacccaatgtttcgagtaggccttgatgtgtttgaggaagagccctacatgaaacctgg 965 Query: 269 gctggctgagatgaagaatgcc 290 ||| || ||| ||||||||||| Sbjct: 966 gcttgcagagttgaagaatgcc 987
>dbj|D49433.1| Cucurbita cv. Kurokawa Amakuri mRNA for hydroxypyruvate reductase, complete cds Length = 1362 Score = 60.0 bits (30), Expect = 4e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 228 ggcctcgatgtttttgaggatgagccttacatgaagccagggctggctgagatgaagaat 287 ||||||||||| || |||||||| || |||||||| || ||||| ||||| ||||||||| Sbjct: 913 ggcctcgatgtcttcgaggatgaaccatacatgaaacctgggcttgctgatatgaagaat 972 Query: 288 gc 289 || Sbjct: 973 gc 974
>dbj|D49432.1| Cucurbita cv. Kurokawa Amakuri mRNA for hydroxypyruvate reductase, complete cds Length = 1269 Score = 60.0 bits (30), Expect = 4e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 228 ggcctcgatgtttttgaggatgagccttacatgaagccagggctggctgagatgaagaat 287 ||||||||||| || |||||||| || |||||||| || ||||| ||||| ||||||||| Sbjct: 913 ggcctcgatgtcttcgaggatgaaccatacatgaaacctgggcttgctgatatgaagaat 972 Query: 288 gc 289 || Sbjct: 973 gc 974
>gb|AF503360.1| Glycine max clone P42-1 putative NADH-dependent hydroxypyruvate reductase mRNA, complete cds Length = 1492 Score = 50.1 bits (25), Expect = 0.004 Identities = 67/81 (82%) Strand = Plus / Plus Query: 210 aaccccatgttccgtgtcggcctcgatgtttttgaggatgagccttacatgaagccaggg 269 ||||| ||||| || || ||||| || || |||||||| ||||| |||||||| || ||| Sbjct: 909 aacccgatgtttcgagtaggccttgacgtgtttgaggaagagccctacatgaaacccggg 968 Query: 270 ctggctgagatgaagaatgcc 290 || || ||| ||||||||||| Sbjct: 969 cttgcagagttgaagaatgcc 989
>gb|AY842251.1| Chlamydomonas reinhardtii hydroxypyruvate reductase mRNA, partial cds Length = 931 Score = 44.1 bits (22), Expect = 0.25 Identities = 37/42 (88%) Strand = Plus / Plus Query: 174 atcgacgaggttgcactggtggagcacctcaaggctaacccc 215 |||||||||| || ||||||| |||||||||||| |||||| Sbjct: 694 atcgacgaggcggcgctggtggcgcacctcaaggccaacccc 735
>ref|NM_105471.2| Arabidopsis thaliana HPR; oxidoreductase, acting on the CH-OH group of donors, NAD or NADP as acceptor AT1G68010 (HPR) mRNA, complete cds Length = 1494 Score = 44.1 bits (22), Expect = 0.25 Identities = 190/246 (77%) Strand = Plus / Plus Query: 32 catggaggaggtcctcagggaggccgatgtgataagcctgcacccggtgcttgacaagac 91 |||||||||||| || | ||||| ||| ||||||| || ||||||||||| ||||| || Sbjct: 752 catggaggaggtgctgcgtgaggctgatctgataagtcttcacccggtgctggacaaaac 811 Query: 92 gacgtaccacctgataaacccagagcggctggcgatgatgaagaaggaggcagtgctggt 151 || ||||| || | ||| ||| |||| || |||||||| ||||| ||| | || || Sbjct: 812 cacttaccatcttgtcaacaaggagaggcttgccatgatgaaaaaggaagcaatccttgt 871 Query: 152 gaacgcgagccgtggcccggtgatcgacgaggttgcactggtggagcacctcaaggctaa 211 |||| ||| | || || |||||||| |||| || |||| || || ||||| | || Sbjct: 872 gaactgcagcagaggtcctgtgatcgatgaggcagctttggtcgaacatctcaaagagaa 931 Query: 212 ccccatgttccgtgtcggcctcgatgtttttgaggatgagccttacatgaagccagggct 271 ||| |||||||| || || |||||||| || ||||| ||||| | |||||| |||||||| Sbjct: 932 cccgatgttccgagttggtctcgatgtgttcgaggaagagccattcatgaaaccagggct 991 Query: 272 ggctga 277 ||||| Sbjct: 992 tgctga 997
>gb|AY113871.1| Arabidopsis thaliana putative hydroxypyruvate reductase (At1g68010) mRNA, complete cds Length = 1192 Score = 44.1 bits (22), Expect = 0.25 Identities = 190/246 (77%) Strand = Plus / Plus Query: 32 catggaggaggtcctcagggaggccgatgtgataagcctgcacccggtgcttgacaagac 91 |||||||||||| || | ||||| ||| ||||||| || ||||||||||| ||||| || Sbjct: 687 catggaggaggtgctgcgtgaggctgatctgataagtcttcacccggtgctggacaaaac 746 Query: 92 gacgtaccacctgataaacccagagcggctggcgatgatgaagaaggaggcagtgctggt 151 || ||||| || | ||| ||| |||| || |||||||| ||||| ||| | || || Sbjct: 747 cacttaccatcttgtcaacaaggagaggcttgccatgatgaaaaaggaagcaatccttgt 806 Query: 152 gaacgcgagccgtggcccggtgatcgacgaggttgcactggtggagcacctcaaggctaa 211 |||| ||| | || || |||||||| |||| || |||| || || ||||| | || Sbjct: 807 gaactgcagcagaggtcctgtgatcgatgaggcagctttggtcgaacatctcaaagagaa 866 Query: 212 ccccatgttccgtgtcggcctcgatgtttttgaggatgagccttacatgaagccagggct 271 ||| |||||||| || || |||||||| || ||||| ||||| | |||||| |||||||| Sbjct: 867 cccgatgttccgagttggtctcgatgtgttcgaggaagagccattcatgaaaccagggct 926 Query: 272 ggctga 277 ||||| Sbjct: 927 tgctga 932
>gb|AF370221.1| Arabidopsis thaliana putative hydroxypyruvate reductase HPR (At1g68010) mRNA, complete cds Length = 1417 Score = 44.1 bits (22), Expect = 0.25 Identities = 190/246 (77%) Strand = Plus / Plus Query: 32 catggaggaggtcctcagggaggccgatgtgataagcctgcacccggtgcttgacaagac 91 |||||||||||| || | ||||| ||| ||||||| || ||||||||||| ||||| || Sbjct: 752 catggaggaggtgctgcgtgaggctgatctgataagtcttcacccggtgctggacaaaac 811 Query: 92 gacgtaccacctgataaacccagagcggctggcgatgatgaagaaggaggcagtgctggt 151 || ||||| || | ||| ||| |||| || |||||||| ||||| ||| | || || Sbjct: 812 cacttaccatcttgtcaacaaggagaggcttgccatgatgaaaaaggaagcaatccttgt 871 Query: 152 gaacgcgagccgtggcccggtgatcgacgaggttgcactggtggagcacctcaaggctaa 211 |||| ||| | || || |||||||| |||| || |||| || || ||||| | || Sbjct: 872 gaactgcagcagaggtcctgtgatcgatgaggcagctttggtcgaacatctcaaagagaa 931 Query: 212 ccccatgttccgtgtcggcctcgatgtttttgaggatgagccttacatgaagccagggct 271 ||| |||||||| || || |||||||| || ||||| ||||| | |||||| |||||||| Sbjct: 932 cccgatgttccgagttggtctcgatgtgttcgaggaagagccattcatgaaaccagggct 991 Query: 272 ggctga 277 ||||| Sbjct: 992 tgctga 997
>gb|AC109442.3| Homo sapiens chromosome 5 clone CTC-345B2, complete sequence Length = 71075 Score = 44.1 bits (22), Expect = 0.25 Identities = 22/22 (100%) Strand = Plus / Plus Query: 30 agcatggaggaggtcctcaggg 51 |||||||||||||||||||||| Sbjct: 48212 agcatggaggaggtcctcaggg 48233
>gb|AY099552.1| Arabidopsis thaliana hydroxypyruvate reductase (HPR) (At1g68010) mRNA, complete cds Length = 1376 Score = 44.1 bits (22), Expect = 0.25 Identities = 190/246 (77%) Strand = Plus / Plus Query: 32 catggaggaggtcctcagggaggccgatgtgataagcctgcacccggtgcttgacaagac 91 |||||||||||| || | ||||| ||| ||||||| || ||||||||||| ||||| || Sbjct: 744 catggaggaggtgctgcgtgaggctgatctgataagtcttcacccggtgctggacaaaac 803 Query: 92 gacgtaccacctgataaacccagagcggctggcgatgatgaagaaggaggcagtgctggt 151 || ||||| || | ||| ||| |||| || |||||||| ||||| ||| | || || Sbjct: 804 cacttaccatcttgtcaacaaggagaggcttgccatgatgaaaaaggaagcaatccttgt 863 Query: 152 gaacgcgagccgtggcccggtgatcgacgaggttgcactggtggagcacctcaaggctaa 211 |||| ||| | || || |||||||| |||| || |||| || || ||||| | || Sbjct: 864 gaactgcagcagaggtcctgtgatcgatgaggcagctttggtcgaacatctcaaagagaa 923 Query: 212 ccccatgttccgtgtcggcctcgatgtttttgaggatgagccttacatgaagccagggct 271 ||| |||||||| || || |||||||| || ||||| ||||| | |||||| |||||||| Sbjct: 924 cccgatgttccgagttggtctcgatgtgttcgaggaagagccattcatgaaaccagggct 983 Query: 272 ggctga 277 ||||| Sbjct: 984 tgctga 989
>gb|AC106752.3| Homo sapiens chromosome 5 clone RP11-166J22, complete sequence Length = 95926 Score = 44.1 bits (22), Expect = 0.25 Identities = 22/22 (100%) Strand = Plus / Plus Query: 30 agcatggaggaggtcctcaggg 51 |||||||||||||||||||||| Sbjct: 5141 agcatggaggaggtcctcaggg 5162
>emb|BX814872.1|CNS0ABHT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS14ZG09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1321 Score = 44.1 bits (22), Expect = 0.25 Identities = 190/246 (77%) Strand = Plus / Plus Query: 32 catggaggaggtcctcagggaggccgatgtgataagcctgcacccggtgcttgacaagac 91 |||||||||||| || | ||||| ||| ||||||| || ||||||||||| ||||| || Sbjct: 717 catggaggaggtgctgcgtgaggctgatctgataagtcttcacccggtgctggacaaaac 776 Query: 92 gacgtaccacctgataaacccagagcggctggcgatgatgaagaaggaggcagtgctggt 151 || ||||| || | ||| ||| |||| || |||||||| ||||| ||| | || || Sbjct: 777 cacttaccatcttgtcaacaaggagaggcttgccatgatgaaaaaggaagcaatccttgt 836 Query: 152 gaacgcgagccgtggcccggtgatcgacgaggttgcactggtggagcacctcaaggctaa 211 |||| ||| | || || |||||||| |||| || |||| || || ||||| | || Sbjct: 837 gaactgcagcagaggtcctgtgatcgatgaggcagctttggtcgaacatctcaaagagaa 896 Query: 212 ccccatgttccgtgtcggcctcgatgtttttgaggatgagccttacatgaagccagggct 271 ||| |||||||| || || |||||||| || ||||| ||||| | |||||| |||||||| Sbjct: 897 cccgatgttccgagttggtctcgatgtgttcgaggaagagccattcatgaaaccagggct 956 Query: 272 ggctga 277 ||||| Sbjct: 957 tgctga 962
>gb|AC004826.3|AC004826 Homo sapiens PAC clone RP1-309D19 from 5, complete sequence Length = 149172 Score = 44.1 bits (22), Expect = 0.25 Identities = 22/22 (100%) Strand = Plus / Plus Query: 30 agcatggaggaggtcctcaggg 51 |||||||||||||||||||||| Sbjct: 107563 agcatggaggaggtcctcaggg 107584
>gb|BT001237.1| Arabidopsis thaliana hydroxypyruvate reductase (HPR) (At1g68010) mRNA, complete cds Length = 1194 Score = 44.1 bits (22), Expect = 0.25 Identities = 190/246 (77%) Strand = Plus / Plus Query: 32 catggaggaggtcctcagggaggccgatgtgataagcctgcacccggtgcttgacaagac 91 |||||||||||| || | ||||| ||| ||||||| || ||||||||||| ||||| || Sbjct: 687 catggaggaggtgctgcgtgaggctgatctgataagtcttcacccggtgctggacaaaac 746 Query: 92 gacgtaccacctgataaacccagagcggctggcgatgatgaagaaggaggcagtgctggt 151 || ||||| || | ||| ||| |||| || |||||||| ||||| ||| | || || Sbjct: 747 cacttaccatcttgtcaacaaggagaggcttgccatgatgaaaaaggaagcaatccttgt 806 Query: 152 gaacgcgagccgtggcccggtgatcgacgaggttgcactggtggagcacctcaaggctaa 211 |||| ||| | || || |||||||| |||| || |||| || || ||||| | || Sbjct: 807 gaactgcagcagaggtcctgtgatcgatgaggcagctttggtcgaacatctcaaagagaa 866 Query: 212 ccccatgttccgtgtcggcctcgatgtttttgaggatgagccttacatgaagccagggct 271 ||| |||||||| || || |||||||| || ||||| ||||| | |||||| |||||||| Sbjct: 867 cccgatgttccgagttggtctcgatgtgttcgaggaagagccattcatgaaaccagggct 926 Query: 272 ggctga 277 ||||| Sbjct: 927 tgctga 932
>gb|CP000300.1| Methanococcoides burtonii DSM 6242, complete genome Length = 2575032 Score = 42.1 bits (21), Expect = 0.98 Identities = 24/25 (96%) Strand = Plus / Plus Query: 232 tcgatgtttttgaggatgagcctta 256 |||||||||||||||| |||||||| Sbjct: 1676855 tcgatgtttttgaggaagagcctta 1676879
>dbj|D85339.1| Arabidopsis thaliana mRNA for hydroxypyruvate reductase, complete cds Length = 1428 Score = 42.1 bits (21), Expect = 0.98 Identities = 48/57 (84%) Strand = Plus / Plus Query: 32 catggaggaggtcctcagggaggccgatgtgataagcctgcacccggtgcttgacaa 88 |||||||||||| || | ||||| ||| ||||||| || ||||||||||| ||||| Sbjct: 767 catggaggaggtgctgcgtgaggctgatctgataagtcttcacccggtgctggacaa 823
>dbj|BA000002.2| Aeropyrum pernix K1 DNA, complete genome Length = 1669695 Score = 42.1 bits (21), Expect = 0.98 Identities = 21/21 (100%) Strand = Plus / Plus Query: 38 ggaggtcctcagggaggccga 58 ||||||||||||||||||||| Sbjct: 318954 ggaggtcctcagggaggccga 318974
>gb|AC102457.11| Mus musculus chromosome 19, clone RP24-312C18, complete sequence Length = 147128 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 agcatggaggaggtcctcag 49 |||||||||||||||||||| Sbjct: 15559 agcatggaggaggtcctcag 15540
>gb|AC168275.4| Mus musculus 10 BAC RP23-350O21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 188458 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 200 cctcaaggctaaccccatgttccg 223 ||||||||||| |||||||||||| Sbjct: 37215 cctcaaggctagccccatgttccg 37192
>gb|AC168276.3| Mus musculus BAC RP24-485I12 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 186675 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 200 cctcaaggctaaccccatgttccg 223 ||||||||||| |||||||||||| Sbjct: 151118 cctcaaggctagccccatgttccg 151095
>gb|AC130215.3| Mus musculus BAC clone RP23-286E1 from 6, complete sequence Length = 168515 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 28 ccagcatggaggaggtcctcaggg 51 |||| ||||||||||||||||||| Sbjct: 48844 ccaggatggaggaggtcctcaggg 48821
>emb|CR653454.2|CNS0F36C Tetraodon nigroviridis full-length cDNA Length = 723 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 119 gctggcgatgatgaagaaggaggc 142 ||||||| |||||||||||||||| Sbjct: 419 gctggcggtgatgaagaaggaggc 442
>gb|AC083893.33| Mus musculus strain C57BL/6J clone rp23-21l18 map 4, complete sequence Length = 244349 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 107 aaacccagagcggctggcgatgat 130 ||||||| |||||||||||||||| Sbjct: 211050 aaacccacagcggctggcgatgat 211073
>emb|AL662982.3|OSJN00184 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0083I11, complete sequence Length = 149085 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 tccagcatggaggaggtcct 46 |||||||||||||||||||| Sbjct: 138919 tccagcatggaggaggtcct 138938
>emb|BX088577.3| Mouse DNA sequence from clone RP23-58H16 on chromosome 4, complete sequence Length = 228379 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 107 aaacccagagcggctggcgatgat 130 ||||||| |||||||||||||||| Sbjct: 96858 aaacccacagcggctggcgatgat 96835
>gb|AE016816.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome III, complete sequence Length = 907057 Score = 40.1 bits (20), Expect = 3.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 228 ggcctcgatgtttttgaggatgagcctt 255 ||||||||||||| |||||||| ||||| Sbjct: 647519 ggcctcgatgtttgtgaggatgggcctt 647546
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 tccagcatggaggaggtcct 46 |||||||||||||||||||| Sbjct: 7492566 tccagcatggaggaggtcct 7492585
>ref|NM_208920.1| Eremothecium gossypii ACR165Wp (ACR165W), mRNA Length = 3420 Score = 40.1 bits (20), Expect = 3.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 228 ggcctcgatgtttttgaggatgagcctt 255 ||||||||||||| |||||||| ||||| Sbjct: 3291 ggcctcgatgtttgtgaggatgggcctt 3318
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 3.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 146 gctggtgaacgcgagccgtggcccggtg 173 |||||| ||||| ||||||||||||||| Sbjct: 2415924 gctggtaaacgccagccgtggcccggtg 2415951
>emb|AL662960.3|OSJN00162 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0021F22, complete sequence Length = 181498 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 tccagcatggaggaggtcct 46 |||||||||||||||||||| Sbjct: 15039 tccagcatggaggaggtcct 15058
>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica Length = 3272609 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 cttgacaagacgacgtacca 100 |||||||||||||||||||| Sbjct: 1934180 cttgacaagacgacgtacca 1934161 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,354,502 Number of Sequences: 3902068 Number of extensions: 2354502 Number of successful extensions: 46569 Number of sequences better than 10.0: 40 Number of HSP's better than 10.0 without gapping: 40 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 46430 Number of HSP's gapped (non-prelim): 139 length of query: 296 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 274 effective length of database: 17,147,199,772 effective search space: 4698332737528 effective search space used: 4698332737528 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
