>NOTC1_RAT (Q07008) Neurogenic locus notch homolog protein 1 precursor (Notch 1)|
            [Contains: Notch 1 extracellular truncation; Notch 1
            intracellular domain]
          Length = 2531

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
 Frame = +1

Query: 190  PYNPQLTPMQRQLTSDFVPLYQSAFPSATLHPRAGAMRSSYSASLGYSANPLDSVPNHER 369
            P  P   P+   L  +   L  ++ PS+ + P       +  +   YS++P+D+ P+H+ 
Sbjct: 2420 PLGPSSLPVHTILPQESQAL-PTSLPSSMVPPMTTTQFLTPPSQHSYSSSPVDNTPSHQL 2478

Query: 370  QSMVAPF---APQSSD 408
            Q    PF   +P+S D
Sbjct: 2479 QVPEHPFLTPSPESPD 2494

>AXN_XENLA (Q9YGY0) Axin (Axis inhibition protein) (xAxin)|
          Length = 842

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 18/91 (19%), Positives = 41/91 (45%)
 Frame = +1

Query: 172 KETFHGPYNPQLTPMQRQLTSDFVPLYQSAFPSATLHPRAGAMRSSYSASLGYSANPLDS 351
           K  +H  ++      + Q+  +     Q+ FP             +Y+ S+G + NP+DS
Sbjct: 540 KHVYHHVHHHGGVKPKEQIDGESTQRVQTNFPWNVESHNYATKSRNYAESMGMAPNPMDS 599

Query: 352 VPNHERQSMVAPFAPQSSDIEVFQALSNNIP 444
           +    + SM++    + +D+   ++ S+ +P
Sbjct: 600 LAYSGKVSMLSKRNAKKADLGKSESASHEMP 630

>TYRP1_BOVIN (Q8WN57) 5,6-dihydroxyindole-2-carboxylic acid oxidase precursor|
           (EC 1.14.18.-) (DHICA oxidase) (Tyrosinase-related
           protein 1) (TRP-1) (TRP1)
          Length = 537

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
 Frame = +1

Query: 310 YSASLGYSANPLDSVP-NHERQSMVAPFAPQSSDIEVFQALSNNIPGGHT-EATW 468
           Y+A +  S  PL++ P  H RQ  + PF P  ++IE+F    +N+  G+T E  W
Sbjct: 418 YNADI--STYPLENAPIGHNRQYNMVPFWPPVTNIEMFVTAPDNL--GYTYEVQW 468

>FEM1_CAEEL (P17221) Sex-determining protein fem-1 (Feminization of XX and XO|
           animals protein 1)
          Length = 656

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 11/24 (45%), Positives = 18/24 (75%)
 Frame = -1

Query: 240 KITRQLPLHRSELRIIRPMEGFFQ 169
           K + ++PLH  +LR++R ME FF+
Sbjct: 276 KQSMEVPLHADDLRLVREMETFFE 299

>PER49_ARATH (O23237) Peroxidase 49 precursor (EC 1.11.1.7) (Atperox P49)|
           (ATP31)
          Length = 331

 Score = 29.3 bits (64), Expect = 5.3
 Identities = 21/57 (36%), Positives = 30/57 (52%)
 Frame = +1

Query: 301 RSSYSASLGYSANPLDSVPNHERQSMVAPFAPQSSDIEVFQALSNNIPGGHTEATWF 471
           R S SASL  S N + + PN+  Q++++ F  Q  DI    ALS +   G +  T F
Sbjct: 152 RDSRSASLSQSNNNIPA-PNNTFQTILSKFNRQGLDITDLVALSGSHTIGFSRCTSF 207

>NOTC1_MOUSE (Q01705) Neurogenic locus notch homolog protein 1 precursor (Notch 1)|
            (Motch A) (mT14) (p300) [Contains: Notch 1 extracellular
            truncation; Notch 1 intracellular domain]
          Length = 2531

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
 Frame = +1

Query: 190  PYNPQLTPMQRQLTSDFVPLYQSAFPSATLHPRAGAMRSSYSASLGYSANPLDSVPNHER 369
            P  P   P+   L  +   L  ++ PS+ + P       +  +   YS++P+D+ P+H+ 
Sbjct: 2420 PLGPSSLPVHTILPQESQAL-PTSLPSSMVPPMTTTQFLTPPSQHSYSSSPVDNTPSHQL 2478

Query: 370  QSMVAPF---APQSSD 408
            Q     F   +P+S D
Sbjct: 2479 QVPEPTFLTPSPESPD 2494

>TYRP1_CARAU (P55028) 5,6-dihydroxyindole-2-carboxylic acid oxidase precursor|
           (EC 1.14.18.-) (DHICA oxidase) (Tyrosinase-related
           protein 1) (TRP-1) (TRP1)
          Length = 522

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = +1

Query: 331 SANPLDSVP-NHERQSMVAPFAPQSSDIEVFQALSNNIPGGHTEATW 468
           S  PL++ P  H R+  + PF P  ++ E+F   + N+ G   EA W
Sbjct: 413 SIYPLENTPIGHNREFNMVPFWPPVTNAEMFVTAAENL-GYSYEAEW 458


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.317    0.129    0.393 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,860,157
Number of Sequences: 219361
Number of extensions: 1199534
Number of successful extensions: 3199
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3117
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3198
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3072927439
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)