>SEC14_SCHPO (Q10137) Sec14 cytosolic factor|
           (Phosphatidylinositol/phosphatidyl-choline transfer
           protein) (PI/PC TP) (Sporulation-specific protein 20)
          Length = 286

 Score = 37.4 bits (85), Expect = 0.023
 Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 2/88 (2%)
 Frame = +3

Query: 171 GISPFRFPMQMMRSFVNLVQENYPNRLGXXXXXXXXXXXXXXAHTFIQLLKPSTKQKLRF 350
           GI+        +R   ++ Q+ YP R+G               +     L  +T +K+  
Sbjct: 178 GITSIHSVYSYIRQASSISQDYYPERMGKFYVINAPWGFSSAFNLIKGFLDEATVKKIHI 237

Query: 351 EGESYKKTLAEFLQI--VPAFLGGKCNC 428
            G +YK  L E +    +PA LGG C C
Sbjct: 238 LGSNYKSALLEQIPADNLPAKLGGNCQC 265

>S14L3_RAT (Q9Z1J8) SEC14-like protein 3 (45 kDa secretory protein) (rsec45)|
          Length = 400

 Score = 34.7 bits (78), Expect = 0.15
 Identities = 23/95 (24%), Positives = 42/95 (44%), Gaps = 5/95 (5%)
 Frame = +3

Query: 147 ITVLLDCHGISPFRF---PMQMMRSFVNLVQENYPNRLGXXXXXXXXXXXXXXAHTFIQL 317
           I ++ DC G+    F    +++ + F  L++ENYP  L                +     
Sbjct: 149 IVMIFDCEGLGLKHFWKPLVEVYQEFFGLLEENYPETLKFMLIVKATKLFPVGYNLMKPF 208

Query: 318 LKPSTKQKLRFEGESYKKTLAEFL--QIVPAFLGG 416
           L   T++K+   G S+K+ L + +  + +PA  GG
Sbjct: 209 LSEDTRRKIVVLGNSWKEGLLKLISPEELPAHFGG 243

>RETM_DROME (Q9VMD6) Protein real-time|
          Length = 659

 Score = 33.5 bits (75), Expect = 0.33
 Identities = 26/99 (26%), Positives = 43/99 (43%), Gaps = 8/99 (8%)
 Frame = +3

Query: 150 TVLLDCHGISP---FRFPMQMMRSFVNLVQENYPNRLGXXXXXXXXXXXXXXAHTFIQLL 320
           ++L+D  G+S    +R  ++ + + +  V+ NYP  +G                     +
Sbjct: 360 SLLVDLEGLSMRHLWRPGIKALLNIIETVERNYPETMGRVLVVRAPRVFPIAWTIVSAFI 419

Query: 321 KPSTKQKLRFEGES---YKKTLAEFL--QIVPAFLGGKC 422
              T+ K  F G      K  LA++L  +IVP FLGG C
Sbjct: 420 DEHTRSKFLFYGPDCAHMKDGLAQYLDEEIVPDFLGGPC 458

>SEC14_ASHGO (Q75DK1) SEC14 cytosolic factor|
           (Phosphatidylinositol/phosphatidylcholine transfer
           protein) (PI/PC TP)
          Length = 311

 Score = 32.7 bits (73), Expect = 0.57
 Identities = 26/99 (26%), Positives = 40/99 (40%), Gaps = 4/99 (4%)
 Frame = +3

Query: 156 LLDCHGISPFRFP--MQMMRSFVNLVQENYPNRLGXXXXXXXXXXXXXXAHTFIQLLKPS 329
           +LD  GIS       +  +R   N+ Q  YP R+G                 F   L P 
Sbjct: 177 ILDLKGISISAAAQVLSYVREASNIGQNYYPERMGKFYMINAPFGFSAAFRLFKPFLDPV 236

Query: 330 TKQKLRFEGESYKKTLAEFL--QIVPAFLGGKCNCSRCK 440
           T  K+   G SY+K L + +  + +P   GG+ + S  +
Sbjct: 237 TVSKIFILGSSYQKELLKQIPAENLPVKFGGQSDVSEAE 275

>S14L3_HUMAN (Q9UDX4) SEC14-like protein 3 (Tocopherol-associated protein 2)|
          Length = 400

 Score = 32.7 bits (73), Expect = 0.57
 Identities = 22/95 (23%), Positives = 42/95 (44%), Gaps = 5/95 (5%)
 Frame = +3

Query: 147 ITVLLDCHGISPFRF---PMQMMRSFVNLVQENYPNRLGXXXXXXXXXXXXXXAHTFIQL 317
           I ++ DC G+    F    +++ + F  L++ENYP  L                +     
Sbjct: 149 IVMIFDCEGLGLKHFWKPLVEVYQEFFGLLEENYPETLKFMLIVKATKLFPVGYNLMKPF 208

Query: 318 LKPSTKQKLRFEGESYKKTLAEFL--QIVPAFLGG 416
           L   T++K+   G ++K+ L + +  + +PA  GG
Sbjct: 209 LSEDTRRKIIVLGNNWKEGLLKLISPEELPAQFGG 243

>SEC14_KLULA (P24859) SEC14 cytosolic factor|
           (Phosphatidylinositol/phosphatidylcholine transfer
           protein) (PI/PC TP)
          Length = 301

 Score = 32.0 bits (71), Expect = 0.97
 Identities = 26/99 (26%), Positives = 39/99 (39%), Gaps = 4/99 (4%)
 Frame = +3

Query: 156 LLDCHGISPFRFP--MQMMRSFVNLVQENYPNRLGXXXXXXXXXXXXXXAHTFIQLLKPS 329
           +LD  GIS       +  +R   N+ Q  YP R+G                 F   L P 
Sbjct: 174 ILDLKGISISSAAQVLSYVREASNIGQNYYPERMGKFYLINAPFGFSTAFRLFKPFLDPV 233

Query: 330 TKQKLRFEGESYKKTLAEFL--QIVPAFLGGKCNCSRCK 440
           T  K+   G SY+K L + +  + +P   GG+   S  +
Sbjct: 234 TVSKIFILGSSYQKDLLKQIPAENLPKKFGGQSEVSEAE 272

>SEC14_CANAL (P46250) SEC14 cytosolic factor|
           (Phosphatidylinositol/phosphatidylcholine transfer
           protein) (PI/PC TP)
          Length = 301

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 22/78 (28%), Positives = 31/78 (39%), Gaps = 2/78 (2%)
 Frame = +3

Query: 204 MRSFVNLVQENYPNRLGXXXXXXXXXXXXXXAHTFIQLLKPSTKQKLRFEGESYKKTLAE 383
           +R    + Q+ YP R+G                 F   L P T  K+   G SYKK L +
Sbjct: 194 VREASKIGQDYYPERMGKFYLINAPFGFSTAFKLFKPFLDPVTVSKIHILGYSYKKELLK 253

Query: 384 FL--QIVPAFLGGKCNCS 431
            +  Q +P   GG  + S
Sbjct: 254 QIPPQNLPVKFGGMSDVS 271

>YN02_CAEEL (Q03606) Hypothetical protein T23G5.2 in chromosome III|
          Length = 743

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 23/104 (22%), Positives = 44/104 (42%), Gaps = 8/104 (7%)
 Frame = +3

Query: 150 TVLLDCHGISP---FRFPMQMMRSFVNLVQENYPNRLGXXXXXXXXXXXXXXAHTFIQLL 320
           ++++D  G+S    +R  +Q +   + +V+ NYP  +G                     +
Sbjct: 417 SLVVDLDGLSMRHLWRPGVQCLLKIIEIVEANYPETMGQVLVVRAPRVFPVLWTLISPFI 476

Query: 321 KPSTKQKLRFEGES---YKKTLAEFLQ--IVPAFLGGKCNCSRC 437
              T++K    G S    K+ L + ++   +P FLGG C  + C
Sbjct: 477 DEKTRKKFMVSGGSGGDLKEELRKHIEEKFIPDFLGGSCLTTNC 520

>SEC14_YEAST (P24280) SEC14 cytosolic factor|
           (Phosphatidylinositol/phosphatidylcholine transfer
           protein) (PI/PC TP)
          Length = 303

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 22/84 (26%), Positives = 31/84 (36%), Gaps = 2/84 (2%)
 Frame = +3

Query: 195 MQMMRSFVNLVQENYPNRLGXXXXXXXXXXXXXXAHTFIQLLKPSTKQKLRFEGESYKKT 374
           M  +R    + Q  YP R+G                 F   L P T  K+   G SY+K 
Sbjct: 190 MSYVREASYISQNYYPERMGKFYIINAPFGFSTAFRLFKPFLDPVTVSKIFILGSSYQKE 249

Query: 375 LAEFL--QIVPAFLGGKCNCSRCK 440
           L + +  + +P   GGK      K
Sbjct: 250 LLKQIPAENLPVKFGGKSEVDESK 273

>S14L1_HUMAN (Q92503) SEC14-like protein 1|
          Length = 715

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 24/101 (23%), Positives = 46/101 (45%), Gaps = 8/101 (7%)
 Frame = +3

Query: 150 TVLLDCHGISP---FRFPMQMMRSFVNLVQENYPNRLGXXXXXXXXXXXXXXAHTFIQLL 320
           T L+D  G++    +R  ++ +   + +V+ NYP  LG                     +
Sbjct: 393 TCLVDLEGLNMRHLWRPGVKALLRIIEVVEANYPETLGRLLILRAPRVFPVLWTLVSPFI 452

Query: 321 KPSTKQK-LRFEGESYKKT--LAEFL--QIVPAFLGGKCNC 428
             +T++K L + G  Y+    L +++  +I+P FL G+C C
Sbjct: 453 DDNTRRKFLIYAGNDYQGPGGLLDYIDKEIIPDFLSGECMC 493

>PIV6_ADES1 (Q8JN68) Minor capsid protein 6 precursor (Minor capsid protein VI)|
           [Contains: Protease cofactor]
          Length = 223

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -3

Query: 82  PKRGLSRGAIVEHASPRRITKQGRRPR 2
           P RG++ G ++E  +PR I   G RPR
Sbjct: 168 PDRGVALGPLIEEPAPRPIAVPGSRPR 194

>UVRC_LACPL (Q88VE9) UvrABC system protein C (Protein uvrC) (Excinuclease ABC|
           subunit C)
          Length = 604

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 4/70 (5%)
 Frame = +3

Query: 51  TIAPRDRPRFGQAVVSQIDHGIIHLTNEEDPRITVLLDCHGISPFRF----PMQMMRSFV 218
           T+  + +P F   +     +  I +TNE DP+I ++ D      + F     +   +  V
Sbjct: 81  TLIQKHQPYFNIKLKKGTGYPYIKITNERDPQILIVSDVRKDGGYYFGPYPNVYAAQETV 140

Query: 219 NLVQENYPNR 248
           N +Q+ YP R
Sbjct: 141 NFIQKVYPLR 150

>LMO7_HUMAN (Q8WWI1) LIM domain only protein 7 (LOMP) (F-box only protein 20)|
          Length = 1683

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 13/46 (28%), Positives = 23/46 (50%)
 Frame = -3

Query: 478  PSPAWISELSRGFLHREQLHLPPRKAGTICKNSANVFLYDSPSKRS 341
            P P  +S  +R ++      +PP  AG++  ++  V    SP+ RS
Sbjct: 1546 PPPQLVSTSNRAYMRNPSSSVPPPSAGSVKTSTTGVATTQSPTPRS 1591

>MINT_MOUSE (Q62504) Msx2-interacting protein (SPEN homolog)|
            (SMART/HDAC1-associated repressor protein)
          Length = 3644

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 14/50 (28%), Positives = 25/50 (50%)
 Frame = +2

Query: 317  PETIHKAEAAFRGGIVQEDVSRVLTDRPSFPRRQMQLLSMQEASRQFTNP 466
            P+   +A+    GG+ Q  +  + T+RPS P  Q+Q   ++ A     +P
Sbjct: 3365 PQVSQEAKGTQTGGVEQTRLPAIPTNRPSEPHAQLQRAPVETAQPAHPSP 3414

>KC12_YEAST (P23292) Casein kinase I homolog 2 (EC 2.7.11.1)|
          Length = 546

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +2

Query: 416 QMQLLSMQEASRQFTNPGRGGEQEQEPY 499
           Q Q   MQ+ S+QF N G  G+  + PY
Sbjct: 484 QQQQKQMQQKSKQFANTGANGQTNKYPY 511

>GLND_RHILV (Q9RAE4) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII|
           uridylyl-transferase) (Uridylyl-removing enzyme) (UTase)
          Length = 944

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 9/61 (14%)
 Frame = -2

Query: 374 RLLVRFPLETQLLLCGWFQELNKSMRNNS---------DNWRKTDNN*YSKTIWVVFLNQ 222
           +LL     ET+LLL G F E+++  R N+          +W + D N Y+K  +  +L  
Sbjct: 632 QLLRTLYYETELLLAGGFSEVSRKERANAAAEALHSALADWSQKDRNTYTKLHYQPYLLS 691

Query: 221 V 219
           V
Sbjct: 692 V 692

>Y01H_BPT4 (P39427) Hypothetical 8.1 kDa protein in modB-mrh intergenic region|
          Length = 67

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -2

Query: 329 GWFQELNKSMRNNSDNWRKT 270
           GW ++ NK M+N S+ W K+
Sbjct: 22  GWVEQANKEMQNESEEWMKS 41


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,292,892
Number of Sequences: 219361
Number of extensions: 1210015
Number of successful extensions: 3590
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 3462
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3589
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3638905326
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)