ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal15n01 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_475602.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1362 Score = 149 bits (75), Expect = 1e-32 Identities = 141/163 (86%) Strand = Plus / Plus Query: 275 gccgcgctcatcgacgcgcaagattcccaccctgattcggttcgacttagccttgggatt 334 |||||||||||||||| ||||| || |||||||| || |||| |||||||||||||||| Sbjct: 265 gccgcgctcatcgacgtccaagactctcaccctgactcagttcaacttagccttgggatt 324 Query: 335 gctgagcagtgtgcaaggcaagagaaaatcctaaagtttctaatgtcagggtccgatgtc 394 || ||||| || ||||||| ||||||||||| || ||||||| ||||||||||||||| Sbjct: 325 gccgagcaatgctcaaggcaggagaaaatcctgaaatttctaaggtcagggtccgatgtg 384 Query: 395 aaagaacttgacgcctctttgcttactgaacttacgggacatc 437 ||||||||||| | ||||| || |||||||||||||| |||| Sbjct: 385 aaagaacttgatgtatctttactgactgaacttacggggcatc 427 Score = 81.8 bits (41), Expect = 2e-12 Identities = 82/96 (85%) Strand = Plus / Plus Query: 464 caaccatatactcctgatgacaagttatctgtatatgagtttggattggaggagcctctg 523 |||||||||| ||||| || ||||||||| | |||||||||| |||||| ||||| | | Sbjct: 508 caaccatatatccctgacgataagttatctatctatgagtttgaattggatgagccccag 567 Query: 524 cagtatctagcagaaaatcaacttatnctccctgat 559 ||||||||| |||||||||||||| | |||||||| Sbjct: 568 cagtatctaccagaaaatcaacttgtcatccctgat 603 Score = 67.9 bits (34), Expect = 4e-08 Identities = 74/86 (86%), Gaps = 6/86 (6%) Strand = Plus / Plus Query: 14 atggtgggcgacct---gtccctcctcgcctccg---ccaccgcctcccccgtcctccta 67 |||||||||||||| |||||||||||| ||| || |||||||||||||| |||| Sbjct: 1 atggtgggcgacctctcctccctcctcgccgccgcctcctccgcctcccccgtcgtcctc 60 Query: 68 gcgccatccaaggagctccatggcgt 93 |||||||| ||||||||||||||||| Sbjct: 61 gcgccatcaaaggagctccatggcgt 86 Score = 60.0 bits (30), Expect = 9e-06 Identities = 83/102 (81%), Gaps = 9/102 (8%) Strand = Plus / Plus Query: 48 ccgcctcccccgtcctcctagcgccatccaaggagctccatggcgtcc---------tgc 98 |||||||||||||| |||| |||||||| ||||||||||||||||| | ||| Sbjct: 41 ccgcctcccccgtcgtcctcgcgccatcaaaggagctccatggcgtgcacttgccgatgc 100 Query: 99 cgttccaggggaagaggtcccagcagcagcagcaggacgctg 140 || |||||||||||||| | | || ||||| ||||||||||| Sbjct: 101 cgctccaggggaagaggccgccgctgcagccgcaggacgctg 142
>dbj|AK099030.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013126M11, full insert sequence Length = 1756 Score = 149 bits (75), Expect = 1e-32 Identities = 141/163 (86%) Strand = Plus / Plus Query: 275 gccgcgctcatcgacgcgcaagattcccaccctgattcggttcgacttagccttgggatt 334 |||||||||||||||| ||||| || |||||||| || |||| |||||||||||||||| Sbjct: 411 gccgcgctcatcgacgtccaagactctcaccctgactcagttcaacttagccttgggatt 470 Query: 335 gctgagcagtgtgcaaggcaagagaaaatcctaaagtttctaatgtcagggtccgatgtc 394 || ||||| || ||||||| ||||||||||| || ||||||| ||||||||||||||| Sbjct: 471 gccgagcaatgctcaaggcaggagaaaatcctgaaatttctaaggtcagggtccgatgtg 530 Query: 395 aaagaacttgacgcctctttgcttactgaacttacgggacatc 437 ||||||||||| | ||||| || |||||||||||||| |||| Sbjct: 531 aaagaacttgatgtatctttactgactgaacttacggggcatc 573 Score = 81.8 bits (41), Expect = 2e-12 Identities = 82/96 (85%) Strand = Plus / Plus Query: 464 caaccatatactcctgatgacaagttatctgtatatgagtttggattggaggagcctctg 523 |||||||||| ||||| || ||||||||| | |||||||||| |||||| ||||| | | Sbjct: 654 caaccatatatccctgacgataagttatctatctatgagtttgaattggatgagccccag 713 Query: 524 cagtatctagcagaaaatcaacttatnctccctgat 559 ||||||||| |||||||||||||| | |||||||| Sbjct: 714 cagtatctaccagaaaatcaacttgtcatccctgat 749 Score = 69.9 bits (35), Expect = 9e-09 Identities = 75/87 (86%), Gaps = 6/87 (6%) Strand = Plus / Plus Query: 13 gatggtgggcgacctgtcc---ctcctcgcctccgccacc---gcctcccccgtcctcct 66 ||||||||||||||| ||| ||||||||| ||||| || |||||||||||| |||| Sbjct: 146 gatggtgggcgacctctcctccctcctcgccgccgcctcctccgcctcccccgtcgtcct 205 Query: 67 agcgccatccaaggagctccatggcgt 93 |||||||| ||||||||||||||||| Sbjct: 206 cgcgccatcaaaggagctccatggcgt 232
>dbj|AK072841.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143G06, full insert sequence Length = 1728 Score = 149 bits (75), Expect = 1e-32 Identities = 141/163 (86%) Strand = Plus / Plus Query: 275 gccgcgctcatcgacgcgcaagattcccaccctgattcggttcgacttagccttgggatt 334 |||||||||||||||| ||||| || |||||||| || |||| |||||||||||||||| Sbjct: 415 gccgcgctcatcgacgtccaagactctcaccctgactcagttcaacttagccttgggatt 474 Query: 335 gctgagcagtgtgcaaggcaagagaaaatcctaaagtttctaatgtcagggtccgatgtc 394 || ||||| || ||||||| ||||||||||| || ||||||| ||||||||||||||| Sbjct: 475 gccgagcaatgctcaaggcaggagaaaatcctgaaatttctaaggtcagggtccgatgtg 534 Query: 395 aaagaacttgacgcctctttgcttactgaacttacgggacatc 437 ||||||||||| | ||||| || |||||||||||||| |||| Sbjct: 535 aaagaacttgatgtatctttactgactgaacttacggggcatc 577 Score = 81.8 bits (41), Expect = 2e-12 Identities = 82/96 (85%) Strand = Plus / Plus Query: 464 caaccatatactcctgatgacaagttatctgtatatgagtttggattggaggagcctctg 523 |||||||||| ||||| || ||||||||| | |||||||||| |||||| ||||| | | Sbjct: 658 caaccatatatccctgacgataagttatctatctatgagtttgaattggatgagccccag 717 Query: 524 cagtatctagcagaaaatcaacttatnctccctgat 559 ||||||||| |||||||||||||| | |||||||| Sbjct: 718 cagtatctaccagaaaatcaacttgtcatccctgat 753 Score = 69.9 bits (35), Expect = 9e-09 Identities = 75/87 (86%), Gaps = 6/87 (6%) Strand = Plus / Plus Query: 13 gatggtgggcgacctgtcc---ctcctcgcctccgccacc---gcctcccccgtcctcct 66 ||||||||||||||| ||| ||||||||| ||||| || |||||||||||| |||| Sbjct: 150 gatggtgggcgacctctcctccctcctcgccgccgcctcctccgcctcccccgtcgtcct 209 Query: 67 agcgccatccaaggagctccatggcgt 93 |||||||| ||||||||||||||||| Sbjct: 210 cgcgccatcaaaggagctccatggcgt 236
>gb|AY104709.1| Zea mays PCO125596 mRNA sequence Length = 691 Score = 135 bits (68), Expect = 2e-28 Identities = 110/124 (88%) Strand = Plus / Plus Query: 275 gccgcgctcatcgacgcgcaagattcccaccctgattcggttcgacttagccttgggatt 334 |||| ||||||||||| ||||||||| |||||||| ||||||| |||||||||||||||| Sbjct: 493 gccgtgctcatcgacgtgcaagattctcaccctgactcggttcaacttagccttgggatt 552 Query: 335 gctgagcagtgtgcaaggcaagagaaaatcctaaagtttctaatgtcagggtccgatgtc 394 || ||||| |||||||||||||||||| |||| |||||||| ||||||| || ||||| Sbjct: 553 gcggagcaatgtgcaaggcaagagaaactcctcaagtttctggtgtcaggatctgatgtt 612 Query: 395 aaag 398 |||| Sbjct: 613 aaag 616 Score = 101 bits (51), Expect = 3e-18 Identities = 90/103 (87%) Strand = Plus / Plus Query: 12 cgatggtgggcgacctgtccctcctcgcctccgccaccgcctcccccgtcctcctagcgc 71 |||||||||| |||||||||||||||||| |||| |||||||||||||| |||| ||| Sbjct: 221 cgatggtgggggacctgtccctcctcgccgtcgcctccgcctcccccgtcgtcctcccgc 280 Query: 72 catccaaggagctccatggcgtcctgccgttccaggggaagag 114 | |||||||||||||||||||| || || ||||||| ||||| Sbjct: 281 cttccaaggagctccatggcgtgcttcctctccagggtaagag 323
>gb|AC104283.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1607_F09, complete sequence Length = 95755 Score = 127 bits (64), Expect = 4e-26 Identities = 118/136 (86%) Strand = Plus / Minus Query: 302 caccctgattcggttcgacttagccttgggattgctgagcagtgtgcaaggcaagagaaa 361 |||||||| || |||| |||||||||||||||||| ||||| || ||||||| |||||| Sbjct: 8840 caccctgactcagttcaacttagccttgggattgccgagcaatgctcaaggcaggagaaa 8781 Query: 362 atcctaaagtttctaatgtcagggtccgatgtcaaagaacttgacgcctctttgcttact 421 ||||| || ||||||| ||||||||||||||| ||||||||||| | ||||| || ||| Sbjct: 8780 atcctgaaatttctaaggtcagggtccgatgtgaaagaacttgatgtatctttactgact 8721 Query: 422 gaacttacgggacatc 437 ||||||||||| |||| Sbjct: 8720 gaacttacggggcatc 8705 Score = 81.8 bits (41), Expect = 2e-12 Identities = 82/96 (85%) Strand = Plus / Minus Query: 464 caaccatatactcctgatgacaagttatctgtatatgagtttggattggaggagcctctg 523 |||||||||| ||||| || ||||||||| | |||||||||| |||||| ||||| | | Sbjct: 8624 caaccatatatccctgacgataagttatctatctatgagtttgaattggatgagccccag 8565 Query: 524 cagtatctagcagaaaatcaacttatnctccctgat 559 ||||||||| |||||||||||||| | |||||||| Sbjct: 8564 cagtatctaccagaaaatcaacttgtcatccctgat 8529 Score = 44.1 bits (22), Expect = 0.52 Identities = 62/74 (83%), Gaps = 6/74 (8%) Strand = Plus / Minus Query: 13 gatggtgggcgacctgtcc---ctcctcgcctccgccacc---gcctcccccgtcctcct 66 ||||||||||||||| ||| ||||||||| ||||| || |||||||||||| |||| Sbjct: 9748 gatggtgggcgacctctcctccctcctcgccgccgcctcctccgcctcccccgtcgtcct 9689 Query: 67 agcgccatccaagg 80 |||||||| |||| Sbjct: 9688 cgcgccatcaaagg 9675 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Minus Query: 96 tgccgttccaggggaagaggtcccagcagcagcagcaggacgctg 140 ||||| |||||||||||||| | | || ||||| ||||||||||| Sbjct: 9576 tgccgctccaggggaagaggccgccgctgcagccgcaggacgctg 9532
>gb|AC104277.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1264_A04, complete sequence Length = 133271 Score = 127 bits (64), Expect = 4e-26 Identities = 118/136 (86%) Strand = Plus / Minus Query: 302 caccctgattcggttcgacttagccttgggattgctgagcagtgtgcaaggcaagagaaa 361 |||||||| || |||| |||||||||||||||||| ||||| || ||||||| |||||| Sbjct: 117418 caccctgactcagttcaacttagccttgggattgccgagcaatgctcaaggcaggagaaa 117359 Query: 362 atcctaaagtttctaatgtcagggtccgatgtcaaagaacttgacgcctctttgcttact 421 ||||| || ||||||| ||||||||||||||| ||||||||||| | ||||| || ||| Sbjct: 117358 atcctgaaatttctaaggtcagggtccgatgtgaaagaacttgatgtatctttactgact 117299 Query: 422 gaacttacgggacatc 437 ||||||||||| |||| Sbjct: 117298 gaacttacggggcatc 117283 Score = 81.8 bits (41), Expect = 2e-12 Identities = 82/96 (85%) Strand = Plus / Minus Query: 464 caaccatatactcctgatgacaagttatctgtatatgagtttggattggaggagcctctg 523 |||||||||| ||||| || ||||||||| | |||||||||| |||||| ||||| | | Sbjct: 117202 caaccatatatccctgacgataagttatctatctatgagtttgaattggatgagccccag 117143 Query: 524 cagtatctagcagaaaatcaacttatnctccctgat 559 ||||||||| |||||||||||||| | |||||||| Sbjct: 117142 cagtatctaccagaaaatcaacttgtcatccctgat 117107 Score = 44.1 bits (22), Expect = 0.52 Identities = 62/74 (83%), Gaps = 6/74 (8%) Strand = Plus / Minus Query: 13 gatggtgggcgacctgtcc---ctcctcgcctccgccacc---gcctcccccgtcctcct 66 ||||||||||||||| ||| ||||||||| ||||| || |||||||||||| |||| Sbjct: 118326 gatggtgggcgacctctcctccctcctcgccgccgcctcctccgcctcccccgtcgtcct 118267 Query: 67 agcgccatccaagg 80 |||||||| |||| Sbjct: 118266 cgcgccatcaaagg 118253 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Minus Query: 96 tgccgttccaggggaagaggtcccagcagcagcagcaggacgctg 140 ||||| |||||||||||||| | | || ||||| ||||||||||| Sbjct: 118154 tgccgctccaggggaagaggccgccgctgcagccgcaggacgctg 118110
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 127 bits (64), Expect = 4e-26 Identities = 118/136 (86%) Strand = Plus / Minus Query: 302 caccctgattcggttcgacttagccttgggattgctgagcagtgtgcaaggcaagagaaa 361 |||||||| || |||| |||||||||||||||||| ||||| || ||||||| |||||| Sbjct: 2441818 caccctgactcagttcaacttagccttgggattgccgagcaatgctcaaggcaggagaaa 2441759 Query: 362 atcctaaagtttctaatgtcagggtccgatgtcaaagaacttgacgcctctttgcttact 421 ||||| || ||||||| ||||||||||||||| ||||||||||| | ||||| || ||| Sbjct: 2441758 atcctgaaatttctaaggtcagggtccgatgtgaaagaacttgatgtatctttactgact 2441699 Query: 422 gaacttacgggacatc 437 ||||||||||| |||| Sbjct: 2441698 gaacttacggggcatc 2441683 Score = 81.8 bits (41), Expect = 2e-12 Identities = 82/96 (85%) Strand = Plus / Minus Query: 464 caaccatatactcctgatgacaagttatctgtatatgagtttggattggaggagcctctg 523 |||||||||| ||||| || ||||||||| | |||||||||| |||||| ||||| | | Sbjct: 2441602 caaccatatatccctgacgataagttatctatctatgagtttgaattggatgagccccag 2441543 Query: 524 cagtatctagcagaaaatcaacttatnctccctgat 559 ||||||||| |||||||||||||| | |||||||| Sbjct: 2441542 cagtatctaccagaaaatcaacttgtcatccctgat 2441507 Score = 44.1 bits (22), Expect = 0.52 Identities = 62/74 (83%), Gaps = 6/74 (8%) Strand = Plus / Minus Query: 13 gatggtgggcgacctgtcc---ctcctcgcctccgccacc---gcctcccccgtcctcct 66 ||||||||||||||| ||| ||||||||| ||||| || |||||||||||| |||| Sbjct: 2442726 gatggtgggcgacctctcctccctcctcgccgccgcctcctccgcctcccccgtcgtcct 2442667 Query: 67 agcgccatccaagg 80 |||||||| |||| Sbjct: 2442666 cgcgccatcaaagg 2442653 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Minus Query: 96 tgccgttccaggggaagaggtcccagcagcagcagcaggacgctg 140 ||||| |||||||||||||| | | || ||||| ||||||||||| Sbjct: 2442554 tgccgctccaggggaagaggccgccgctgcagccgcaggacgctg 2442510 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 gcgccatccaaggagctcca 87 |||||||||||||||||||| Sbjct: 25771128 gcgccatccaaggagctcca 25771109
>ref|XM_473399.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2088 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 107 gggaagaggtcccagcagcagcagcag 133 |||||||| |||||||||||||||||| Sbjct: 106 gggaagagctcccagcagcagcagcag 132
>emb|AL607006.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0079A21, complete sequence Length = 141787 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 107 gggaagaggtcccagcagcagcagcag 133 |||||||| |||||||||||||||||| Sbjct: 64076 gggaagagctcccagcagcagcagcag 64102
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 107 gggaagaggtcccagcagcagcagcag 133 |||||||| |||||||||||||||||| Sbjct: 27328148 gggaagagctcccagcagcagcagcag 27328174 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 242 gccgccgccgccgcctaccaggcc 265 |||||||||||||||| ||||||| Sbjct: 34786899 gccgccgccgccgcctcccaggcc 34786922
>dbj|AK102945.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033114L22, full insert sequence Length = 2937 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 107 gggaagaggtcccagcagcagcagcag 133 |||||||| |||||||||||||||||| Sbjct: 579 gggaagagctcccagcagcagcagcag 605
>ref|XM_511667.1| PREDICTED: Pan troglodytes similar to otopetrin 2 (LOC454870), mRNA Length = 2133 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 236 ggccaggccgccgccgccgcct 257 |||||||||||||||||||||| Sbjct: 261 ggccaggccgccgccgccgcct 282
>ref|XM_469224.1| Oryza sativa (japonica cultivar-group), mRNA Length = 738 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 238 ccaggccgccgccgccgcctac 259 |||||||||||||||||||||| Sbjct: 70 ccaggccgccgccgccgcctac 49
>ref|NM_002699.2| Homo sapiens POU domain, class 3, transcription factor 1 (POU3F1), mRNA Length = 2170 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 235 cggccaggccgccgccgccgcc 256 |||||||||||||||||||||| Sbjct: 552 cggccaggccgccgccgccgcc 531
>ref|NM_186422.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1189 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 235 cggccaggccgccgccgccgcc 256 |||||||||||||||||||||| Sbjct: 462 cggccaggccgccgccgccgcc 483
>ref|XM_506174.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1714_H10.153 mRNA Length = 1772 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 235 cggccaggccgccgccgccgcc 256 |||||||||||||||||||||| Sbjct: 462 cggccaggccgccgccgccgcc 483
>ref|XM_524672.1| PREDICTED: Pan troglodytes similar to POU domain, class 3, transcription factor 1 (Octamer-binding transcription factor 6) (Oct-6) (POU-domain transcription factor SCIP) (Tst-1) (LOC469287), mRNA Length = 1338 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 235 cggccaggccgccgccgccgcc 256 |||||||||||||||||||||| Sbjct: 502 cggccaggccgccgccgccgcc 481
>gb|BC078673.1| Homo sapiens cDNA clone IMAGE:6090579 Length = 2676 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 235 cggccaggccgccgccgccgcc 256 |||||||||||||||||||||| Sbjct: 1614 cggccaggccgccgccgccgcc 1635
>ref|NM_011141.1| Mus musculus POU domain, class 3, transcription factor 1 (Pou3f1), mRNA Length = 1517 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 235 cggccaggccgccgccgccgcc 256 |||||||||||||||||||||| Sbjct: 568 cggccaggccgccgccgccgcc 547
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 238 ccaggccgccgccgccgcctac 259 |||||||||||||||||||||| Sbjct: 26211890 ccaggccgccgccgccgcctac 26211869
>emb|CR956424.18| Pig DNA sequence from clone PigE-234J24 on chromosome 6, complete sequence Length = 118731 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 235 cggccaggccgccgccgccgcc 256 |||||||||||||||||||||| Sbjct: 26618 cggccaggccgccgccgccgcc 26639
>gb|AC098886.4| Mus musculus BAC clone RP23-122M21 from 4, complete sequence Length = 219825 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 235 cggccaggccgccgccgccgcc 256 |||||||||||||||||||||| Sbjct: 113438 cggccaggccgccgccgccgcc 113459
>ref|NM_012227.1| Homo sapiens GTP binding protein 6 (putative) (GTPBP6), mRNA Length = 1867 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 160 gctctccccgcagcagcacctcctcg 185 ||||||||||||||||| |||||||| Sbjct: 255 gctctccccgcagcagctcctcctcg 230
>emb|AL139158.11| Human DNA sequence from clone RP5-884C9 on chromosome 1p34.1-35.3, complete sequence Length = 115614 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 235 cggccaggccgccgccgccgcc 256 |||||||||||||||||||||| Sbjct: 20656 cggccaggccgccgccgccgcc 20677
>emb|Z18284.1|HSOCT6TR Homo sapiens Oct-6 transcription factor Length = 1733 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 235 cggccaggccgccgccgccgcc 256 |||||||||||||||||||||| Sbjct: 739 cggccaggccgccgccgccgcc 718
>emb|X57482.1|MMOCT6R M.musculus Oct-6 mRNA for octamer binding protein Length = 1504 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 235 cggccaggccgccgccgccgcc 256 |||||||||||||||||||||| Sbjct: 533 cggccaggccgccgccgccgcc 512
>emb|X56959.1|MDSCIP Mouse SCIP mRNA for a POU-domain transcription factor Length = 1516 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 235 cggccaggccgccgccgccgcc 256 |||||||||||||||||||||| Sbjct: 549 cggccaggccgccgccgccgcc 528
>emb|X54628.1|MMOCT6GR M. musculus oct6 gene for the octamer binding factor oct6 Length = 1517 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 235 cggccaggccgccgccgccgcc 256 |||||||||||||||||||||| Sbjct: 568 cggccaggccgccgccgccgcc 547
>gb|AC116369.5| Oryza sativa chromosome 3 BAC OSJNBb0113I20 genomic sequence, complete sequence Length = 122939 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 238 ccaggccgccgccgccgcctac 259 |||||||||||||||||||||| Sbjct: 41349 ccaggccgccgccgccgcctac 41328
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 235 cggccaggccgccgccgccgcc 256 |||||||||||||||||||||| Sbjct: 3378242 cggccaggccgccgccgccgcc 3378221 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 aggccgccgccgccgcctac 259 |||||||||||||||||||| Sbjct: 7172648 aggccgccgccgccgcctac 7172629
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 238 ccaggccgccgccgccgcctac 259 |||||||||||||||||||||| Sbjct: 26303199 ccaggccgccgccgccgcctac 26303178
>ref|XM_392563.2| PREDICTED: Apis mellifera hypothetical LOC409034 (LOC409034), mRNA Length = 8172 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 39 cctccgccaccgcctcccccgtcctc 64 ||||||||||||||||| |||||||| Sbjct: 3683 cctccgccaccgcctcctccgtcctc 3658
>dbj|AB221691.1| Mus musculus adult male liver DNA, clone:V02Y028A13 Length = 1350 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 235 cggccaggccgccgccgccgcc 256 |||||||||||||||||||||| Sbjct: 514 cggccaggccgccgccgccgcc 493
>dbj|AK223412.1| Homo sapiens mRNA for pseudoautosomal GTP-binding protein-like protein variant, clone: FCC109C11 Length = 1726 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 160 gctctccccgcagcagcacctcctcg 185 ||||||||||||||||| |||||||| Sbjct: 242 gctctccccgcagcagctcctcctcg 217
>gb|AC009970.10| Homo sapiens BAC clone RP11-440P5 from 2, complete sequence Length = 137009 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 236 ggccaggccgccgccgccgcct 257 |||||||||||||||||||||| Sbjct: 79391 ggccaggccgccgccgccgcct 79412
>ref|NM_138838.1| Rattus norvegicus POU domain, class 3, transcription factor 1 (Pou3f1), mRNA Length = 2977 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 235 cggccaggccgccgccgccgcc 256 |||||||||||||||||||||| Sbjct: 557 cggccaggccgccgccgccgcc 536
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 235 cggccaggccgccgccgccgcc 256 |||||||||||||||||||||| Sbjct: 3969897 cggccaggccgccgccgccgcc 3969876
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Plus Query: 220 gatggtccccgggatcggccaggccgccgc 249 |||||| ||||||||||||| ||||||||| Sbjct: 2893772 gatggtgcccgggatcggcccggccgccgc 2893801
>dbj|AP004664.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0428D12 Length = 141678 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 235 cggccaggccgccgccgccgcc 256 |||||||||||||||||||||| Sbjct: 18062 cggccaggccgccgccgccgcc 18041
>dbj|AK024630.1| Homo sapiens cDNA: FLJ20977 fis, clone ADSU01840, highly similar to HSY14391 Homo sapiens mRNA for putative GTP-binding protein Length = 1853 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 160 gctctccccgcagcagcacctcctcg 185 ||||||||||||||||| |||||||| Sbjct: 236 gctctccccgcagcagctcctcctcg 211
>dbj|AK106274.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-100-G12, full insert sequence Length = 1772 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 235 cggccaggccgccgccgccgcc 256 |||||||||||||||||||||| Sbjct: 462 cggccaggccgccgccgccgcc 483
>dbj|AK105789.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-H03, full insert sequence Length = 1189 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 235 cggccaggccgccgccgccgcc 256 |||||||||||||||||||||| Sbjct: 462 cggccaggccgccgccgccgcc 483
>gb|AC131238.3| Homo sapiens 12 BAC RP11-136L23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 60500 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 235 cggccaggccgccgccgccgcc 256 |||||||||||||||||||||| Sbjct: 19037 cggccaggccgccgccgccgcc 19058
>dbj|AP003847.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1714_H10 Length = 191580 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 235 cggccaggccgccgccgccgcc 256 |||||||||||||||||||||| Sbjct: 187935 cggccaggccgccgccgccgcc 187914
>gb|L26494.1|HUMOCT6A Homo sapiens (oct-6) mRNA, complete cds Length = 2170 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 235 cggccaggccgccgccgccgcc 256 |||||||||||||||||||||| Sbjct: 552 cggccaggccgccgccgccgcc 531
>emb|AL606907.9| Mouse DNA sequence from clone RP23-230F2 on chromosome 4, complete sequence Length = 208265 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 235 cggccaggccgccgccgccgcc 256 |||||||||||||||||||||| Sbjct: 101881 cggccaggccgccgccgccgcc 101902
>emb|Y14391.2|HSY14391 Homo sapiens mRNA for putative GTP-binding protein Length = 1867 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 160 gctctccccgcagcagcacctcctcg 185 ||||||||||||||||| |||||||| Sbjct: 255 gctctccccgcagcagctcctcctcg 230
>gb|M63712.1|RATTST1POU Rat POU domain protein (Tst-1) mRNA, 3' end Length = 1549 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 235 cggccaggccgccgccgccgcc 256 |||||||||||||||||||||| Sbjct: 418 cggccaggccgccgccgccgcc 397
>gb|M72711.1|RATSCIP Rat transcriptional repressor of myelin-specific genes (SCIP) mRNA, complete cds Length = 2977 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 235 cggccaggccgccgccgccgcc 256 |||||||||||||||||||||| Sbjct: 557 cggccaggccgccgccgccgcc 536
>gb|M88302.1|MUSPOUDOMD Mouse scip POU-domain protein, complete cds Length = 2766 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 235 cggccaggccgccgccgccgcc 256 |||||||||||||||||||||| Sbjct: 1214 cggccaggccgccgccgccgcc 1193
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 235 cggccaggccgccgccgccgcctaccagg 263 ||||||||||||||||| || |||||||| Sbjct: 3892522 cggccaggccgccgccggcgtctaccagg 3892494
>ref|NM_189924.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1770 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 34 cctcgcctccgccaccgcctccccc 58 ||||||||||||| ||||||||||| Sbjct: 159 cctcgcctccgcctccgcctccccc 183
>gb|BC030404.1| Mus musculus DNA segment, Chr 4, Brigham & Women's Genetics 0951 expressed, mRNA (cDNA clone MGC:40727 IMAGE:5354204), complete cds Length = 1717 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 237 gccaggccgccgccgccgcct 257 ||||||||||||||||||||| Sbjct: 602 gccaggccgccgccgccgcct 622
>ref|NM_026821.2| Mus musculus DNA segment, Chr 4, Brigham & Women's Genetics 0951 expressed (D4Bwg0951e), mRNA Length = 1717 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 237 gccaggccgccgccgccgcct 257 ||||||||||||||||||||| Sbjct: 602 gccaggccgccgccgccgcct 622
>gb|BC021501.1| Mus musculus DNA segment, Chr 4, Brigham & Women's Genetics 0951 expressed, mRNA (cDNA clone MGC:38429 IMAGE:5346437), complete cds Length = 1598 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 237 gccaggccgccgccgccgcct 257 ||||||||||||||||||||| Sbjct: 485 gccaggccgccgccgccgcct 505
>gb|AY023154.1| Oryza sativa microsatellite MRG5479 containing (GCC)X9, genomic sequence Length = 227 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Plus Query: 96 tgccgttccaggggaagaggtcccagcagcagcagcaggacgctg 140 ||||| |||||||||||||| | | || ||||| ||||||||||| Sbjct: 42 tgccgctccaggggaagaggccgccgctgcagccgcaggacgctg 86
>ref|XM_950856.1| Neurospora crassa OR74A hypothetical protein (NCU06407.1) partial mRNA Length = 3396 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 242 gccgccgccgccgcctaccag 262 ||||||||||||||||||||| Sbjct: 3105 gccgccgccgccgcctaccag 3085
>ref|XM_326261.1| Neurospora crassa OR74A hypothetical protein (NCU06407.1) partial mRNA Length = 3396 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 242 gccgccgccgccgcctaccag 262 ||||||||||||||||||||| Sbjct: 3105 gccgccgccgccgcctaccag 3085
>gb|AC124669.8| Mus musculus chromosome 1, clone RP23-110B5, complete sequence Length = 201456 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 113 aggtcccagcagcagcagcag 133 ||||||||||||||||||||| Sbjct: 49768 aggtcccagcagcagcagcag 49748
>gb|AC108870.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0682E05, complete sequence Length = 162223 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 34 cctcgcctccgccaccgcctccccc 58 ||||||||||||| ||||||||||| Sbjct: 123733 cctcgcctccgccgccgcctccccc 123757
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 235 cggccaggccgccgccgccgc 255 ||||||||||||||||||||| Sbjct: 1099295 cggccaggccgccgccgccgc 1099315
>gb|AC076968.38| Homo sapiens 12 BAC RP11-686F15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 203038 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 242 gccgccgccgccgcctaccaggcct 266 |||||||||||||||| |||||||| Sbjct: 51998 gccgccgccgccgccttccaggcct 52022
>emb|AL356693.37| Human DNA sequence from clone RP11-33M12 on chromosome 1 Contains the 3' end of the NPHP4 gene for nephronophthisis 4, complete sequence Length = 72610 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 31 cctcctcgcctccgccaccgcctcc 55 ||||||| ||||||||||||||||| Sbjct: 53442 cctcctctcctccgccaccgcctcc 53466
>gb|BC050076.1| Homo sapiens nephronophthisis 4, mRNA (cDNA clone IMAGE:5298892), complete cds Length = 3981 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 31 cctcctcgcctccgccaccgcctcc 55 ||||||| ||||||||||||||||| Sbjct: 757 cctcctctcctccgccaccgcctcc 733
>emb|AL939132.1|SCO939132 Streptomyces coelicolor A3(2) complete genome; segment 29/29 Length = 302007 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 37 cgcctccgccaccgcctcccccgtc 61 |||| |||||||||||||||||||| Sbjct: 132625 cgccgccgccaccgcctcccccgtc 132601
>gb|BC028627.1| Homo sapiens nephronophthisis 4, mRNA (cDNA clone IMAGE:4827174), complete cds Length = 3986 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 31 cctcctcgcctccgccaccgcctcc 55 ||||||| ||||||||||||||||| Sbjct: 762 cctcctctcctccgccaccgcctcc 738
>dbj|AB207983.1| Oryzias latipes gene for hoxA11a, complete cds Length = 1674 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 241 ggccgccgccgccgcctacca 261 ||||||||||||||||||||| Sbjct: 345 ggccgccgccgccgcctacca 365
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 235 cggccaggccgccgccgccgc 255 ||||||||||||||||||||| Sbjct: 3457942 cggccaggccgccgccgccgc 3457922
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 235 cggccaggccgccgccgccgc 255 ||||||||||||||||||||| Sbjct: 3878168 cggccaggccgccgccgccgc 3878148
>dbj|AK127333.1| Homo sapiens cDNA FLJ45404 fis, clone BRHIP3029670 Length = 4370 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 31 cctcctcgcctccgccaccgcctcc 55 ||||||| ||||||||||||||||| Sbjct: 858 cctcctctcctccgccaccgcctcc 834
>dbj|AB232918.1| Oryzias latipes hox gene cluster, complete cds Length = 268959 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 241 ggccgccgccgccgcctacca 261 ||||||||||||||||||||| Sbjct: 153117 ggccgccgccgccgcctacca 153137
>gb|AC074105.3| Oryza sativa chromosome 10 clone OSJNBa0030B02, complete sequence Length = 146836 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 235 cggccaggccgccgccgccgc 255 ||||||||||||||||||||| Sbjct: 58176 cggccaggccgccgccgccgc 58156
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 275 gccgcgctcatcgacgcgcaa 295 ||||||||||||||||||||| Sbjct: 741567 gccgcgctcatcgacgcgcaa 741587
>gb|AF365974.1|AF365974 Oryzias latipes transcription factor SOHo mRNA, complete cds Length = 681 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 119 cagcagcagcagcaggacgct 139 ||||||||||||||||||||| Sbjct: 259 cagcagcagcagcaggacgct 279
>emb|BX930374.2| Gallus gallus finished cDNA, clone ChEST626a14 Length = 611 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 117 cccagcagcagcagcaggacg 137 ||||||||||||||||||||| Sbjct: 58 cccagcagcagcagcaggacg 38
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 34 cctcgcctccgccaccgcctccccc 58 ||||||||||||| ||||||||||| Sbjct: 25633686 cctcgcctccgccgccgcctccccc 25633710 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 cgcctccgccaccgcctccc 56 |||||||||||||||||||| Sbjct: 16364176 cgcctccgccaccgcctccc 16364157
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 235 cggccaggccgccgccgccgc 255 ||||||||||||||||||||| Sbjct: 2731400 cggccaggccgccgccgccgc 2731380 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 ggccgccgccgccgcctacc 260 |||||||||||||||||||| Sbjct: 22043344 ggccgccgccgccgcctacc 22043325
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 33 tcctcgcctccgccaccgcctcccccgtcctcc 65 |||||||||||||| ||||||||| || ||||| Sbjct: 7033703 tcctcgcctccgccgccgcctcccacgacctcc 7033671 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 cgccaccgcctcccccgtcc 62 |||||||||||||||||||| Sbjct: 35614672 cgccaccgcctcccccgtcc 35614653 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 ggccgccgccgccgcctacc 260 |||||||||||||||||||| Sbjct: 34679353 ggccgccgccgccgcctacc 34679334 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 ccaggccgccgccgccgcct 257 |||||||||||||||||||| Sbjct: 34294077 ccaggccgccgccgccgcct 34294058 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 aggccgccgccgccgcctac 259 |||||||||||||||||||| Sbjct: 19006917 aggccgccgccgccgcctac 19006898 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 32 ctcctcgcctccgccaccgcctcc 55 |||||||||||||||| ||||||| Sbjct: 9392458 ctcctcgcctccgccatcgcctcc 9392481 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 32 ctcctcgcctccgccaccgcctcc 55 ||||||||||||||| |||||||| Sbjct: 540285 ctcctcgcctccgcctccgcctcc 540308
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 34 cctcgcctccgccaccgcctccccc 58 ||||||||||||| ||||||||||| Sbjct: 39844517 cctcgcctccgcctccgcctccccc 39844493 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 234 tcggccaggccgccgccgccgcct 257 ||||| |||||||||||||||||| Sbjct: 40364701 tcggcaaggccgccgccgccgcct 40364724 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 cggccaggccgccgccgccg 254 |||||||||||||||||||| Sbjct: 18468236 cggccaggccgccgccgccg 18468217
>gb|AC111200.7| Homo sapiens BAC clone RP11-1283H4 from 2, complete sequence Length = 186752 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 236 ggccaggccgccgccgccgcc 256 ||||||||||||||||||||| Sbjct: 81074 ggccaggccgccgccgccgcc 81054
>gb|AY741536.1| Pennisetum glaucum TEL1 gene, partial sequence Length = 3162 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 236 ggccaggccgccgccgccgcc 256 ||||||||||||||||||||| Sbjct: 400 ggccaggccgccgccgccgcc 380
>emb|BX934316.1| Gallus gallus finished cDNA, clone ChEST43h24 Length = 967 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 117 cccagcagcagcagcaggacg 137 ||||||||||||||||||||| Sbjct: 57 cccagcagcagcagcaggacg 37
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 251 gccgcctaccaggccttcgac 271 ||||||||||||||||||||| Sbjct: 2552706 gccgcctaccaggccttcgac 2552726 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 248 gccgccgcctaccaggccttcgac 271 ||||||||| |||||||||||||| Sbjct: 6543826 gccgccgccgaccaggccttcgac 6543849
>ref|XM_345832.2| PREDICTED: Rattus norvegicus GLI-Kruppel family member GLI1 (Gli1), mRNA Length = 3408 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 113 aggtcccagcagcagcagcag 133 ||||||||||||||||||||| Sbjct: 2896 aggtcccagcagcagcagcag 2916
>dbj|AP003433.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0004D12 Length = 138136 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 34 cctcgcctccgccaccgcctccccc 58 ||||||||||||| ||||||||||| Sbjct: 25225 cctcgcctccgcctccgcctccccc 25201
>dbj|AP005003.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0495C02 Length = 151467 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 33 tcctcgcctccgccaccgcctcccccgtcctcc 65 |||||||||||||| ||||||||| || ||||| Sbjct: 37122 tcctcgcctccgccgccgcctcccacgacctcc 37090
>dbj|AP004779.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0470A03 Length = 133167 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 33 tcctcgcctccgccaccgcctcccccgtcctcc 65 |||||||||||||| ||||||||| || ||||| Sbjct: 127325 tcctcgcctccgccgccgcctcccacgacctcc 127293
>emb|AL844604.4| Mouse DNA sequence from clone RP24-318C20 on chromosome 4, complete sequence Length = 173133 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 237 gccaggccgccgccgccgcct 257 ||||||||||||||||||||| Sbjct: 36117 gccaggccgccgccgccgcct 36137
>emb|AL773520.3| Mouse DNA sequence from clone RP23-350F23 on chromosome 4, complete sequence Length = 214496 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 237 gccaggccgccgccgccgcct 257 ||||||||||||||||||||| Sbjct: 14207 gccaggccgccgccgccgcct 14227
>dbj|AK109657.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-140-F06, full insert sequence Length = 1206 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 34 cctcgcctccgccaccgcctccccc 58 ||||||||||||| ||||||||||| Sbjct: 260 cctcgcctccgccgccgcctccccc 284
>dbj|AK106012.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-B03, full insert sequence Length = 1782 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 34 cctcgcctccgccaccgcctccccc 58 ||||||||||||| ||||||||||| Sbjct: 169 cctcgcctccgcctccgcctccccc 193
>dbj|AK064695.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-116-F08, full insert sequence Length = 1075 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 33 tcctcgcctccgccaccgcctcccccgtcctcc 65 |||||||||||||| ||||||||| || ||||| Sbjct: 262 tcctcgcctccgccgccgcctcccacgacctcc 294
>emb|AL732354.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0901F07, complete sequence Length = 110682 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 241 ggccgccgccgccgcctaccaggcc 265 ||||||||||||||||| ||||||| Sbjct: 32085 ggccgccgccgccgcctcccaggcc 32109
>gb|AC005510.3|AC005510 Homo sapiens chromosome 4 clone B368A9 map 4q25, complete sequence Length = 168468 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 120 agcagcagcagcaggacgctg 140 ||||||||||||||||||||| Sbjct: 138063 agcagcagcagcaggacgctg 138043
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 235 cggccaggccgccgccgccgc 255 ||||||||||||||||||||| Sbjct: 3878842 cggccaggccgccgccgccgc 3878822
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 272 agcgccgcgctcatcgacgcgcaag 296 ||||||||||| ||||||||||||| Sbjct: 631132 agcgccgcgcttatcgacgcgcaag 631156
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 245 gccgccgccgcctaccaggcc 265 ||||||||||||||||||||| Sbjct: 4615809 gccgccgccgcctaccaggcc 4615789 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 ggccgccgccgccgcctacc 260 |||||||||||||||||||| Sbjct: 4672749 ggccgccgccgccgcctacc 4672730
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 245 gccgccgccgcctaccaggcc 265 ||||||||||||||||||||| Sbjct: 1665879 gccgccgccgcctaccaggcc 1665899
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 235 cggccaggccgccgccgccgc 255 ||||||||||||||||||||| Sbjct: 2731351 cggccaggccgccgccgccgc 2731331 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 ggccgccgccgccgcctacc 260 |||||||||||||||||||| Sbjct: 22055007 ggccgccgccgccgcctacc 22054988
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 34 cctcgcctccgccaccgcctccccc 58 ||||||||||||| ||||||||||| Sbjct: 25952356 cctcgcctccgccgccgcctccccc 25952380 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 cgcctccgccaccgcctccc 56 |||||||||||||||||||| Sbjct: 16454155 cgcctccgccaccgcctccc 16454136
>gb|AF059247.1|AF059247 Crithidia fasciculata RNA guanylyltransferase gene, complete cds Length = 2466 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 31 cctcctcgcctccgccaccgcctcc 55 |||||||||| |||||||||||||| Sbjct: 342 cctcctcgccaccgccaccgcctcc 366
>gb|AC113474.18| Mus musculus chromosome 5, clone RP23-297J17, complete sequence Length = 219936 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 38 gcctccgccaccgcctcccccgtcctcc 65 |||||||||||| ||||||||| ||||| Sbjct: 69043 gcctccgccaccacctcccccgacctcc 69016
>gb|BC108535.1| Xenopus laevis cDNA clone MGC:130988 IMAGE:7977266, complete cds Length = 2378 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 tcccagcagcagcagcagga 135 |||||||||||||||||||| Sbjct: 221 tcccagcagcagcagcagga 240
>gb|AC118284.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1087_C03, complete sequence Length = 101218 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 gcgccatccaaggagctcca 87 |||||||||||||||||||| Sbjct: 42422 gcgccatccaaggagctcca 42403
>ref|XM_483255.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2032 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 gccaggccgccgccgccgcc 256 |||||||||||||||||||| Sbjct: 1344 gccaggccgccgccgccgcc 1325
>ref|XM_482437.1| Oryza sativa (japonica cultivar-group), mRNA Length = 870 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 gccaggccgccgccgccgcc 256 |||||||||||||||||||| Sbjct: 271 gccaggccgccgccgccgcc 252
>ref|XM_481630.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1023 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 35 ctcgcctccgccaccgcctccccc 58 |||||| ||||||||||||||||| Sbjct: 2 ctcgccgccgccaccgcctccccc 25
>ref|XM_507578.1| PREDICTED Oryza sativa (japonica cultivar-group), P0703C03.43 mRNA Length = 1041 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 35 ctcgcctccgccaccgcctccccc 58 |||||| ||||||||||||||||| Sbjct: 3 ctcgccgccgccaccgcctccccc 26
>ref|XM_507194.2| PREDICTED Oryza sativa (japonica cultivar-group), P0703C03.43 mRNA Length = 1091 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 35 ctcgcctccgccaccgcctccccc 58 |||||| ||||||||||||||||| Sbjct: 6 ctcgccgccgccaccgcctccccc 29
>ref|XM_474380.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2766 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 242 gccgccgccgccgcctaccaggcc 265 |||||||||||||||| ||||||| Sbjct: 145 gccgccgccgccgcctcccaggcc 168
>ref|XM_468335.1| Oryza sativa (japonica cultivar-group), mRNA Length = 591 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 ggccgccgccgccgcctacc 260 |||||||||||||||||||| Sbjct: 532 ggccgccgccgccgcctacc 513
>ref|XM_468514.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1435 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 cgccaccgcctcccccgtcc 62 |||||||||||||||||||| Sbjct: 647 cgccaccgcctcccccgtcc 628
>ref|XM_463818.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1893 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 32 ctcctcgcctccgccaccgcctcc 55 ||||||||||||||| |||||||| Sbjct: 104 ctcctcgcctccgcctccgcctcc 127
>ref|XM_463308.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1584 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 cggccaggccgccgccgccg 254 |||||||||||||||||||| Sbjct: 1052 cggccaggccgccgccgccg 1033
>ref|XM_463642.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 396 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 234 tcggccaggccgccgccgccgcct 257 ||||| |||||||||||||||||| Sbjct: 317 tcggcaaggccgccgccgccgcct 340
>ref|NM_186683.1| Oryza sativa (japonica cultivar-group), mRNA Length = 882 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 aggccgccgccgccgcctac 259 |||||||||||||||||||| Sbjct: 317 aggccgccgccgccgcctac 336
>ref|NM_018715.1| Homo sapiens regulator of chromosome condensation 2 (RCC2), mRNA Length = 4114 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 ccaggccgccgccgccgcct 257 |||||||||||||||||||| Sbjct: 268 ccaggccgccgccgccgcct 249
>ref|XM_513117.1| PREDICTED: Pan troglodytes similar to RCC1-like (LOC456531), mRNA Length = 1986 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 ccaggccgccgccgccgcct 257 |||||||||||||||||||| Sbjct: 192 ccaggccgccgccgccgcct 173
>gb|AC144740.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0075A10, complete sequence Length = 171101 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 gcgccatccaaggagctcca 87 |||||||||||||||||||| Sbjct: 5070 gcgccatccaaggagctcca 5051
>gb|CP000081.1| Leishmania major chromosome 35, complete sequence Length = 2090491 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 cagcagcagcagcaggacgc 138 |||||||||||||||||||| Sbjct: 361701 cagcagcagcagcaggacgc 361720
>gb|AY023263.1| Oryza sativa microsatellite MRG5588 containing (GGC)X8, closest to marker C445, genomic sequence Length = 224 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 242 gccgccgccgccgcctaccaggcc 265 |||||||||||||||| ||||||| Sbjct: 115 gccgccgccgccgcctcccaggcc 92
>gb|AY023134.1| Oryza sativa microsatellite MRG5459 containing (GCC)X8, genomic sequence Length = 224 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 242 gccgccgccgccgcctaccaggcc 265 |||||||||||||||| ||||||| Sbjct: 110 gccgccgccgccgcctcccaggcc 133
>gb|AY020005.1| Oryza sativa microsatellite MRG2330 containing (CT)X15, closest to marker RG445, genomic sequence Length = 230 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 tcgcctccgccaccgcctcc 55 |||||||||||||||||||| Sbjct: 16 tcgcctccgccaccgcctcc 35
>gb|AC010848.14| Drosophila melanogaster clone BACR20N11, complete sequence Length = 175978 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 gccaggccgccgccgccgcc 256 |||||||||||||||||||| Sbjct: 75995 gccaggccgccgccgccgcc 76014
>ref|XM_425891.1| PREDICTED: Gallus gallus similar to KIAA1981 protein (LOC428331), mRNA Length = 3705 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 31 cctcctcgcctccgccaccgcctc 54 |||| ||||||||||||||||||| Sbjct: 1707 cctcatcgcctccgccaccgcctc 1684
>gb|BT025351.1| Bos taurus leptin receptor overlapping transcript-like 1 (LEPROTL1), mRNA, complete cds Length = 656 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 ccaggccgccgccgccgcct 257 |||||||||||||||||||| Sbjct: 9 ccaggccgccgccgccgcct 28
>gb|AC131343.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0057E15, complete sequence Length = 149035 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 cgcctccgccaccgcctccc 56 |||||||||||||||||||| Sbjct: 3750 cgcctccgccaccgcctccc 3731
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome Length = 2467205 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 ccaggccgccgccgccgcct 257 |||||||||||||||||||| Sbjct: 1464627 ccaggccgccgccgccgcct 1464608
>gb|AC160931.2| Mus musculus BAC clone RP24-311F12 from chromosome 12, complete sequence Length = 167090 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 gccaggccgccgccgccgcc 256 |||||||||||||||||||| Sbjct: 54664 gccaggccgccgccgccgcc 54683
>gb|AC114011.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0078f20, complete sequence Length = 151042 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 cgcctccgccaccgcctccc 56 |||||||||||||||||||| Sbjct: 104611 cgcctccgccaccgcctccc 104592
>ref|XM_545614.2| PREDICTED: Canis familiaris similar to frizzled 5 (LOC488493), mRNA Length = 1770 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 242 gccgccgccgccgcctacca 261 |||||||||||||||||||| Sbjct: 1723 gccgccgccgccgcctacca 1742
>ref|XM_838094.1| Leishmania major strain Friedlin hypothetical protein (LMJ_1010) partial mRNA Length = 2340 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 cagcagcagcagcaggacgc 138 |||||||||||||||||||| Sbjct: 889 cagcagcagcagcaggacgc 908
>gb|BC038693.1| Mus musculus, clone IMAGE:1513863, mRNA Length = 742 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 38 gcctccgccaccgcctcccccgtcctcc 65 |||||||||||| ||||||||| ||||| Sbjct: 439 gcctccgccaccacctcccccgacctcc 466
>gb|AC069248.4| Homo sapiens chromosome 3 clone RP11-6I21 map 3p, complete sequence Length = 157493 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 cccagcagcagcagcaggac 136 |||||||||||||||||||| Sbjct: 65810 cccagcagcagcagcaggac 65829
>gb|AY204553.1| Xenopus laevis transporter associated with antigen processing 1 (TAP1) mRNA, TAP1-j allele, partial cds Length = 1337 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 218 atgatggtccccgggatcggccag 241 ||||||||||||| |||||||||| Sbjct: 36 atgatggtccccgagatcggccag 59
>gb|AC115804.7| Mus musculus chromosome 14, clone RP23-411N8, complete sequence Length = 220114 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 tcccagcagcagcagcagga 135 |||||||||||||||||||| Sbjct: 153607 tcccagcagcagcagcagga 153626
>gb|AC147002.20| Medicago truncatula clone mth2-151m16, complete sequence Length = 128621 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 348 caaggcaagagaaaatcctaaagtttct 375 ||||||||||| |||||| ||||||||| Sbjct: 13142 caaggcaagagcaaatccaaaagtttct 13115
>gb|AY305378.1| Ralstonia eutropha H16 megaplasmid pHG1, complete sequence Length = 452156 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 231 ggatcggccaggccgccgccgccg 254 |||||||||||| ||||||||||| Sbjct: 274935 ggatcggccagggcgccgccgccg 274958
>emb|Z93242.1|HS389A20 Human DNA sequence from clone RP3-389A20 on chromosome Xp22.11-22.2 Contains a calcium binding protein P22 (CHP)pseudogene, a novel gene, the 3' end of the NHS gene for Nance-Horan syndrome (congenital cataracts and dental anomalies), the SCML1 gene for sex comb on midleg-like 1 (Drosophila), a novel pseudogene and the RAI2 gene for retinoic acid induced 2, complete sequence Length = 208609 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 195 accaggcgcagcagcccctgcaga 218 ||||||||| |||||||||||||| Sbjct: 186028 accaggcgctgcagcccctgcaga 186051
>gb|AC026231.4| Mus musculus strain C57BL6/J chromosome 5 clone RP23-114F4, complete sequence Length = 208199 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 tcccagcagcagcagcagga 135 |||||||||||||||||||| Sbjct: 111637 tcccagcagcagcagcagga 111618
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 cgggatcggccaggccgccg 248 |||||||||||||||||||| Sbjct: 3459433 cgggatcggccaggccgccg 3459414
>emb|BX640451.1| Bordetella bronchiseptica strain RB50, complete genome; segment 15/16 Length = 343473 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 237 gccaggccgccgccgccgcctaccaggc 264 ||||||||||| ||||||||||||||| Sbjct: 261351 gccaggccgcccgcgccgcctaccaggc 261378
>emb|BX640422.1| Bordetella pertussis strain Tohama I, complete genome; segment 12/12 Length = 257701 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 237 gccaggccgccgccgccgcctaccaggc 264 ||||||||||| ||||||||||||||| Sbjct: 114845 gccaggccgcccgcgccgcctaccaggc 114872
>emb|BX640412.1| Bordetella pertussis strain Tohama I, complete genome; segment 2/12 Length = 348171 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 atcggccaggccgccgccgc 252 |||||||||||||||||||| Sbjct: 84029 atcggccaggccgccgccgc 84010
>emb|AL939121.1|SCO939121 Streptomyces coelicolor A3(2) complete genome; segment 18/29 Length = 292100 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 cgcctccgccaccgcctccc 56 |||||||||||||||||||| Sbjct: 161892 cgcctccgccaccgcctccc 161873
>emb|AL606456.2|OSJN00017 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0017I01, complete sequence Length = 133331 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 242 gccgccgccgccgcctaccaggcc 265 |||||||||||||||| ||||||| Sbjct: 92458 gccgccgccgccgcctcccaggcc 92481
>emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB Length = 1683333 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 182 ctcgagggcgcctaccaggcgcag 205 ||||||| |||||||||||||||| Sbjct: 182187 ctcgaggtcgcctaccaggcgcag 182210
>emb|AL591496.13| Mouse DNA sequence from clone RP23-384C18 on chromosome 11 Contains the 3' end of a novel gene, five novel genes, the Serpinf1 and Serpinf2 genes for serine (or cysteine) proteinase inhibitor, clade F) members 1 and 2, an H+ transporting mitochondrial F0 complex ATP synthase subunit c (subunit 9) isoform 1 (Atp5g1) pseudogene, the Prpf8 gene for pre-mRNA processing factor 8, the gene for the ortholog of human scavenger receptor class F member 1 SCARF1, the 5' end of the gene for novel protein similar to solute carrier family 43 member 1 Slc43a1 and seven CpG islands, complete sequence Length = 205633 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 gaggtcccagcagcagcagc 131 |||||||||||||||||||| Sbjct: 182949 gaggtcccagcagcagcagc 182930
>gb|AC000400.1| Genomic sequence from Mouse 11, complete sequence Length = 78748 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 gaggtcccagcagcagcagc 131 |||||||||||||||||||| Sbjct: 12024 gaggtcccagcagcagcagc 12005
>gb|AC002121.1| Genomic sequence from Mouse 11, complete sequence Length = 84056 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 gaggtcccagcagcagcagc 131 |||||||||||||||||||| Sbjct: 17588 gaggtcccagcagcagcagc 17607
>emb|CR859015.1| Pongo pygmaeus mRNA; cDNA DKFZp469J131 (from clone DKFZp469J131) Length = 4831 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 119 cagcagcagcagcaggacgctggg 142 ||||||||||||||||| |||||| Sbjct: 3476 cagcagcagcagcaggaagctggg 3453
>gb|AC021937.7| Homo sapiens chromosome 8, clone RP11-812B1, complete sequence Length = 164435 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 tcccagcagcagcagcagga 135 |||||||||||||||||||| Sbjct: 71520 tcccagcagcagcagcagga 71501
>gb|AC106716.3| Homo sapiens 3 BAC RP11-202P1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 152883 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 354 aagagaaaatcctaaagttt 373 |||||||||||||||||||| Sbjct: 100764 aagagaaaatcctaaagttt 100745
>gb|AC117424.6| Homo sapiens 3 BAC RP11-172I10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 136511 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 354 aagagaaaatcctaaagttt 373 |||||||||||||||||||| Sbjct: 101885 aagagaaaatcctaaagttt 101904
>ref|NM_167736.1| Drosophila melanogaster CG32521-RC, transcript variant C (CG32521), mRNA Length = 1220 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 gccaggccgccgccgccgcc 256 |||||||||||||||||||| Sbjct: 1009 gccaggccgccgccgccgcc 990
>gb|AC077693.19| Oryza sativa chromosome 10 BAC OSJNBa0095C07 genomic sequence, complete sequence Length = 187707 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 ggccgccgccgccgcctacc 260 |||||||||||||||||||| Sbjct: 47888 ggccgccgccgccgcctacc 47869
>gb|AF465824.1| Oryza sativa transcription factor RAU1 (rau1) mRNA, partial cds Length = 480 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 gccaggccgccgccgccgcc 256 |||||||||||||||||||| Sbjct: 119 gccaggccgccgccgccgcc 100
>dbj|AK153696.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630050O14 product:hypothetical protein, full insert sequence Length = 2476 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 gccaggccgccgccgccgcc 256 |||||||||||||||||||| Sbjct: 201 gccaggccgccgccgccgcc 182
>gb|BC042141.1| Homo sapiens regulator of chromosome condensation 2, mRNA (cDNA clone MGC:52285 IMAGE:5932549), complete cds Length = 1711 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 ccaggccgccgccgccgcct 257 |||||||||||||||||||| Sbjct: 47 ccaggccgccgccgccgcct 28
>gb|BC053908.1| Homo sapiens regulator of chromosome condensation 2, mRNA (cDNA clone MGC:61610 IMAGE:6502476), complete cds Length = 2042 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 ccaggccgccgccgccgcct 257 |||||||||||||||||||| Sbjct: 80 ccaggccgccgccgccgcct 61
>gb|BC108155.1| Bos taurus cDNA clone MGC:133536 IMAGE:8050701, complete cds Length = 705 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 ccaggccgccgccgccgcct 257 |||||||||||||||||||| Sbjct: 47 ccaggccgccgccgccgcct 66
>gb|BC102619.1| Bos taurus cDNA clone IMAGE:7962524 Length = 651 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 ccagcagcagcagcaggacg 137 |||||||||||||||||||| Sbjct: 400 ccagcagcagcagcaggacg 381
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 ggccttcgacagcgccgcgc 281 |||||||||||||||||||| Sbjct: 4102147 ggccttcgacagcgccgcgc 4102166
>dbj|AK053423.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130016J19 product:unclassifiable, full insert sequence Length = 2148 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 tcccagcagcagcagcagga 135 |||||||||||||||||||| Sbjct: 929 tcccagcagcagcagcagga 910
>emb|AL670884.7| Mouse DNA sequence from clone RP23-372M15 on chromosome 4, complete sequence Length = 143363 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 agaggtcccagcagcagcag 130 |||||||||||||||||||| Sbjct: 110599 agaggtcccagcagcagcag 110580
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 cgcctccgccaccgcctccc 56 |||||||||||||||||||| Sbjct: 20448810 cgcctccgccaccgcctccc 20448829
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 ccagcagcagcagcaggacg 137 |||||||||||||||||||| Sbjct: 26306425 ccagcagcagcagcaggacg 26306444 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 gccaggccgccgccgccgcc 256 |||||||||||||||||||| Sbjct: 25083871 gccaggccgccgccgccgcc 25083852 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 gccaggccgccgccgccgcc 256 |||||||||||||||||||| Sbjct: 20084686 gccaggccgccgccgccgcc 20084667 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 35 ctcgcctccgccaccgcctccccc 58 |||||| ||||||||||||||||| Sbjct: 14335694 ctcgccgccgccaccgcctccccc 14335671
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 tcgcctccgccaccgcctcc 55 |||||||||||||||||||| Sbjct: 10908112 tcgcctccgccaccgcctcc 10908093 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 32 ctcctcgcctccgccaccgcctcc 55 ||||||||||||||| |||||||| Sbjct: 5051762 ctcctcgcctccgcctccgcctcc 5051739 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 gccaggccgccgccgccgcc 256 |||||||||||||||||||| Sbjct: 4533930 gccaggccgccgccgccgcc 4533911
>gb|AC004824.3| Homo sapiens PAC clone RP1-20B21 from 1, complete sequence Length = 137506 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 ccaggccgccgccgccgcct 257 |||||||||||||||||||| Sbjct: 23837 ccaggccgccgccgccgcct 23818
>gb|AC024157.4|AC024157 Homo sapiens chromosome 3 clone RP11-233P1 map 3p, complete sequence Length = 160667 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 cccagcagcagcagcaggac 136 |||||||||||||||||||| Sbjct: 12944 cccagcagcagcagcaggac 12925
>dbj|AP006167.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1455F06 Length = 140848 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 234 tcggccaggccgccgccgccgcct 257 ||||| |||||||||||||||||| Sbjct: 73665 tcggcaaggccgccgccgccgcct 73688
>dbj|AP004672.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0592G05 Length = 146220 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 234 tcggccaggccgccgccgccgcct 257 ||||| |||||||||||||||||| Sbjct: 15942 tcggcaaggccgccgccgccgcct 15965
>gb|AC137492.2| Homo sapiens chromosome 16 clone LA16c-379F6, complete sequence Length = 36887 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 gccaggccgccgccgccgcc 256 |||||||||||||||||||| Sbjct: 4675 gccaggccgccgccgccgcc 4656
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 cgggatcggccaggccgccgccgc 252 ||||||||||||| |||||||||| Sbjct: 158081 cgggatcggccagtccgccgccgc 158104
>ref|XM_238365.3| PREDICTED: Rattus norvegicus actin related protein 2/3 complex, subunit 4 (predicted) (Arpc4_predicted), mRNA Length = 1427 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 119 cagcagcagcagcaggacgctggg 142 ||||||||||||||||| |||||| Sbjct: 645 cagcagcagcagcaggaagctggg 668
>emb|BX005069.9| Zebrafish DNA sequence from clone CH211-132P1 in linkage group 14, complete sequence Length = 166320 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 ggtcccagcagcagcagcag 133 |||||||||||||||||||| Sbjct: 11133 ggtcccagcagcagcagcag 11114
>dbj|AP004222.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1003B09 Length = 155263 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 cggccaggccgccgccgccg 254 |||||||||||||||||||| Sbjct: 91994 cggccaggccgccgccgccg 91975
>dbj|AP003563.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1168H06 Length = 185600 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 cggccaggccgccgccgccg 254 |||||||||||||||||||| Sbjct: 67453 cggccaggccgccgccgccg 67434
>dbj|AP005913.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0005A05 Length = 162520 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 gccaggccgccgccgccgcc 256 |||||||||||||||||||| Sbjct: 128660 gccaggccgccgccgccgcc 128641
>dbj|AP004776.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0452F04 Length = 171421 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 cgccaccgcctcccccgtcc 62 |||||||||||||||||||| Sbjct: 131064 cgccaccgcctcccccgtcc 131045
>dbj|AP004752.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0501G04 Length = 156603 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 32 ctcctcgcctccgccaccgcctcc 55 ||||||||||||||| |||||||| Sbjct: 18338 ctcctcgcctccgcctccgcctcc 18361
>dbj|AP003946.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1147_D11 Length = 138444 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 32 ctcctcgcctccgccaccgcctcc 55 ||||||||||||||| |||||||| Sbjct: 10800 ctcctcgcctccgcctccgcctcc 10777
>dbj|AP004081.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1116_E04 Length = 94096 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 ggccgccgccgccgcctacc 260 |||||||||||||||||||| Sbjct: 36304 ggccgccgccgccgcctacc 36285
>dbj|AP004683.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0006C08 Length = 151987 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 32 ctcctcgcctccgccaccgcctcc 55 |||||||||||||||| ||||||| Sbjct: 6019 ctcctcgcctccgccatcgcctcc 6042
>dbj|AP005413.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0055N24 Length = 142702 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 tcgcctccgccaccgcctcc 55 |||||||||||||||||||| Sbjct: 134478 tcgcctccgccaccgcctcc 134459
>dbj|AP006056.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1172G12 Length = 171974 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 32 ctcctcgcctccgccaccgcctcc 55 ||||||||||||||| |||||||| Sbjct: 93876 ctcctcgcctccgcctccgcctcc 93853
>dbj|AP004738.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0090D06 Length = 174500 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 gccaggccgccgccgccgcc 256 |||||||||||||||||||| Sbjct: 21294 gccaggccgccgccgccgcc 21275
>dbj|AP005056.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0689B12 Length = 154745 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 ccaggccgccgccgccgcct 257 |||||||||||||||||||| Sbjct: 129350 ccaggccgccgccgccgcct 129331
>dbj|AP005682.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1531_B07 Length = 115245 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 cgcctccgccaccgcctccc 56 |||||||||||||||||||| Sbjct: 76949 cgcctccgccaccgcctccc 76968
>dbj|AK173208.1| Mus musculus premature mRNA for mKIAA1585 protein Length = 4747 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 gccaggccgccgccgccgcc 256 |||||||||||||||||||| Sbjct: 234 gccaggccgccgccgccgcc 215
>dbj|AP005764.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0016A21 Length = 144076 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 aggccgccgccgccgcctac 259 |||||||||||||||||||| Sbjct: 13132 aggccgccgccgccgcctac 13113
>dbj|AP005516.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0066H10 Length = 200968 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 aggccgccgccgccgcctac 259 |||||||||||||||||||| Sbjct: 199337 aggccgccgccgccgcctac 199318
>dbj|AP005924.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0011J03 Length = 176461 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 32 ctcctcgcctccgccaccgcctcc 55 |||||||||||||||| ||||||| Sbjct: 152712 ctcctcgcctccgccatcgcctcc 152735
>dbj|AP005842.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0003H22 Length = 68256 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 aggccgccgccgccgcctac 259 |||||||||||||||||||| Sbjct: 62238 aggccgccgccgccgcctac 62219
>dbj|AP005749.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0047A17 Length = 149142 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 aggccgccgccgccgcctac 259 |||||||||||||||||||| Sbjct: 12438 aggccgccgccgccgcctac 12419
>emb|AJ421269.1|HSA421269 Homo sapiens mRNA for RCC1-like protein (TD-60 gene) Length = 4114 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 ccaggccgccgccgccgcct 257 |||||||||||||||||||| Sbjct: 268 ccaggccgccgccgccgcct 249
>dbj|AP004015.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1770_H02 Length = 170648 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 ccagcagcagcagcaggacg 137 |||||||||||||||||||| Sbjct: 36006 ccagcagcagcagcaggacg 36025
>dbj|AP004005.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1188_F05 Length = 117045 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 gccaggccgccgccgccgcc 256 |||||||||||||||||||| Sbjct: 31232 gccaggccgccgccgccgcc 31213
>dbj|AP005245.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0025J22 Length = 175355 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 gccaggccgccgccgccgcc 256 |||||||||||||||||||| Sbjct: 139987 gccaggccgccgccgccgcc 139968
>dbj|AP004637.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0703C03 Length = 162620 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 35 ctcgcctccgccaccgcctccccc 58 |||||| ||||||||||||||||| Sbjct: 151250 ctcgccgccgccaccgcctccccc 151227
>dbj|AP003884.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1136_A10 Length = 101249 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 35 ctcgcctccgccaccgcctccccc 58 |||||| ||||||||||||||||| Sbjct: 38774 ctcgccgccgccaccgcctccccc 38751
>dbj|AP005521.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0477F03 Length = 176120 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 gccaggccgccgccgccgcc 256 |||||||||||||||||||| Sbjct: 156537 gccaggccgccgccgccgcc 156518
>dbj|AK121655.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033061N09, full insert sequence Length = 1339 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 cgcctccgccaccgcctccc 56 |||||||||||||||||||| Sbjct: 80 cgcctccgccaccgcctccc 99
>dbj|AK121204.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023087N22, full insert sequence Length = 1091 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 35 ctcgcctccgccaccgcctccccc 58 |||||| ||||||||||||||||| Sbjct: 6 ctcgccgccgccaccgcctccccc 29
>dbj|AK120361.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013067O03, full insert sequence Length = 3399 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 242 gccgccgccgccgcctaccaggcc 265 |||||||||||||||| ||||||| Sbjct: 265 gccgccgccgccgcctcccaggcc 288
>dbj|AK109780.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-147-B12, full insert sequence Length = 1580 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 ccaggccgccgccgccgcct 257 |||||||||||||||||||| Sbjct: 1369 ccaggccgccgccgccgcct 1388
>ref|XM_309714.2| Anopheles gambiae str. PEST ENSANGP00000012581 (ENSANGG00000010092), partial mRNA Length = 4743 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 cagcagcagcagcaggacgc 138 |||||||||||||||||||| Sbjct: 3298 cagcagcagcagcaggacgc 3317
>dbj|AK107890.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-E06, full insert sequence Length = 833 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 242 gccgccgccgccgcctaccaggcc 265 |||||||||||||||| ||||||| Sbjct: 256 gccgccgccgccgcctcccaggcc 279
>dbj|AK106930.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-C02, full insert sequence Length = 1823 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 ccaggccgccgccgccgcct 257 |||||||||||||||||||| Sbjct: 83 ccaggccgccgccgccgcct 64
>emb|AJ339149.1|HSA339149 Homo sapiens genomic sequence surrounding NotI site, clone NR1-AG13R Length = 723 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 ccaggccgccgccgccgcct 257 |||||||||||||||||||| Sbjct: 164 ccaggccgccgccgccgcct 145
>emb|AJ339135.1|HSA339135 Homo sapiens genomic sequence surrounding NotI site, clone NR1-BP24C Length = 679 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 ccaggccgccgccgccgcct 257 |||||||||||||||||||| Sbjct: 164 ccaggccgccgccgccgcct 145
>dbj|AK105163.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-104-D02, full insert sequence Length = 1435 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 cgccaccgcctcccccgtcc 62 |||||||||||||||||||| Sbjct: 647 cgccaccgcctcccccgtcc 628
>dbj|AK101075.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024B08, full insert sequence Length = 2423 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 cgcctccgccaccgcctccc 56 |||||||||||||||||||| Sbjct: 200 cgcctccgccaccgcctccc 219
>dbj|AK100106.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004M08, full insert sequence Length = 2033 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 gccaggccgccgccgccgcc 256 |||||||||||||||||||| Sbjct: 1344 gccaggccgccgccgccgcc 1325
>dbj|AK099940.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013120N16, full insert sequence Length = 2140 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 32 ctcctcgcctccgccaccgcctcc 55 ||||||||||||||| |||||||| Sbjct: 34 ctcctcgcctccgcctccgcctcc 57
>dbj|AK072028.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013105K02, full insert sequence Length = 1418 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 32 ctcctcgcctccgccaccgcctcc 55 |||||||||||||||| ||||||| Sbjct: 471 ctcctcgcctccgccatcgcctcc 448
>dbj|AK070795.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023064M05, full insert sequence Length = 738 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 234 tcggccaggccgccgccgccgcct 257 ||||| |||||||||||||||||| Sbjct: 396 tcggcaaggccgccgccgccgcct 419
>dbj|AK066664.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072I01, full insert sequence Length = 2402 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 32 ctcctcgcctccgccaccgcctcc 55 ||||||||||||||| |||||||| Sbjct: 296 ctcctcgcctccgcctccgcctcc 319
>dbj|AK062210.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-A04, full insert sequence Length = 1041 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 35 ctcgcctccgccaccgcctccccc 58 |||||| ||||||||||||||||| Sbjct: 3 ctcgccgccgccaccgcctccccc 26
>dbj|AK059371.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-026-F01, full insert sequence Length = 614 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 ggccgccgccgccgcctacc 260 |||||||||||||||||||| Sbjct: 146 ggccgccgccgccgcctacc 165
>gb|AE003568.4| Drosophila melanogaster chromosome X, section 71 of 74 of the complete sequence Length = 315815 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 gccaggccgccgccgccgcc 256 |||||||||||||||||||| Sbjct: 4099 gccaggccgccgccgccgcc 4118
>emb|CT573035.8| Mouse DNA sequence from clone RP23-331B8 on chromosome 14, complete sequence Length = 115207 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 tcccagcagcagcagcagga 135 |||||||||||||||||||| Sbjct: 23064 tcccagcagcagcagcagga 23083
>dbj|AP003475.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB2021C9 Length = 147261 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 tcccagcagcagcagcagga 135 |||||||||||||||||||| Sbjct: 83504 tcccagcagcagcagcagga 83523
>gb|AC161018.4| Pan troglodytes BAC clone CH251-345F11 from chromosome unknown, complete sequence Length = 153379 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 tcccagcagcagcagcagga 135 |||||||||||||||||||| Sbjct: 31969 tcccagcagcagcagcagga 31988
>emb|AL137846.24| Human DNA sequence from clone RP11-101K10 on chromosome 9, complete sequence Length = 162839 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 119 cagcagcagcagcaggacgctggg 142 ||||||||||||||||| |||||| Sbjct: 24301 cagcagcagcagcaggaagctggg 24278
>dbj|AP006535.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT02D13, TM0546, complete sequence Length = 107979 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 346 tgcaaggcaagagaaaatcc 365 |||||||||||||||||||| Sbjct: 86143 tgcaaggcaagagaaaatcc 86162
>ref|NM_001037462.1| Bos taurus similar to leptin receptor overlapping transcript-like 1 (predicted) (MGC133536), mRNA Length = 705 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 ccaggccgccgccgccgcct 257 |||||||||||||||||||| Sbjct: 47 ccaggccgccgccgccgcct 66
>emb|AL606969.26| Mouse DNA sequence from clone RP23-331P21 on chromosome 4, complete sequence Length = 224344 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 ggtcccagcagcagcagcag 133 |||||||||||||||||||| Sbjct: 127080 ggtcccagcagcagcagcag 127061
>emb|AL356456.1|LMFLUNK01 Leishmania major Friedlin cosmid clones L9127,L3286,L3175,L8286,L7480, incomplete shotgun, assembled reads, with VERY preliminary annotation, complete sequence Length = 139597 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 cagcagcagcagcaggacgc 138 |||||||||||||||||||| Sbjct: 18485 cagcagcagcagcaggacgc 18466
>emb|AJ342442.1|HSA342442 Homo sapiens genomic sequence surrounding NotI site, clone NR1-QI3C Length = 599 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 ccaggccgccgccgccgcct 257 |||||||||||||||||||| Sbjct: 164 ccaggccgccgccgccgcct 145
>emb|AJ342371.1|HSA342371 Homo sapiens genomic sequence surrounding NotI site, clone NR1-TK2C Length = 667 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 ccaggccgccgccgccgcct 257 |||||||||||||||||||| Sbjct: 163 ccaggccgccgccgccgcct 144
>gb|M81796.1|DROOPTBA Drosophila melanogaster optomotor-blind mRNA, complete cds Length = 4069 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 ccaggccgccgccgccgcct 257 |||||||||||||||||||| Sbjct: 2787 ccaggccgccgccgccgcct 2768
>gb|M59963.1|DROBARH1A2 Drosophila ananassae BarH1 gene, exons 2 and 3 Length = 1097 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 gccaggccgccgccgccgcc 256 |||||||||||||||||||| Sbjct: 550 gccaggccgccgccgccgcc 569
>gb|AC160122.2| Mus musculus BAC clone RP23-390G1 from chromosome 13, complete sequence Length = 208856 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 32 ctcctcgcctccgccaccgcctcc 55 ||||||||||||||| |||||||| Sbjct: 63904 ctcctcgcctccgcctccgcctcc 63881
>dbj|AB058412.1| Chlamydomonas reinhardtii mmp2 gene for matrix metalloprotease 2, complete cds Length = 5628 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 tcgcctccgccaccgcctcc 55 |||||||||||||||||||| Sbjct: 384 tcgcctccgccaccgcctcc 365
>dbj|AB040903.1| Homo sapiens mRNA for KIAA1470 protein, partial cds Length = 4028 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 ccaggccgccgccgccgcct 257 |||||||||||||||||||| Sbjct: 182 ccaggccgccgccgccgcct 163 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,178,213 Number of Sequences: 3902068 Number of extensions: 6178213 Number of successful extensions: 500237 Number of sequences better than 10.0: 236 Number of HSP's better than 10.0 without gapping: 254 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 478659 Number of HSP's gapped (non-prelim): 21564 length of query: 593 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 570 effective length of database: 17,143,297,704 effective search space: 9771679691280 effective search space used: 9771679691280 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
