| Clone Name | baal15m13 |
|---|---|
| Clone Library Name | barley_pub |
>WRK20_ARATH (Q93WV0) Probable WRKY transcription factor 20 (WRKY DNA-binding| protein 20) Length = 557 Score = 38.5 bits (88), Expect = 0.009 Identities = 39/165 (23%), Positives = 56/165 (33%), Gaps = 7/165 (4%) Frame = +3 Query: 3 EPSPTTGSLGMAAILHKSAHPDMLPSPRDKSVRNAHEDRGSRDFEFKPHLNS-------S 161 EPSPTTGSL +H SA +N ++ S +FEF+P ++ Sbjct: 78 EPSPTTGSLFKPRPVHISASSSSYTGRGFH--QNTFTEQKSSEFEFRPPASNMVYAELGK 135 Query: 162 SQSLAPAMSDLKKHEHXXXXXXXXXXXXXXXXVNENRPPCSRESSLTVNVSAQNQPVGMV 341 +S P + H ++ PPC M Sbjct: 136 IRSEPPVHFQGQGHGSSHSPSSISDAAGSSSELSRPTPPCQ-----------------MT 178 Query: 342 GLTDSMPAEVGTSEPQQMNSSDNAMQEPQSENVADKSADDGYNWR 476 + +PA E Q + +D+ P ADDGYNWR Sbjct: 179 PTSSDIPAGSDQEESIQTSQNDSRGSTPSI------LADDGYNWR 217
>WRKY4_ARATH (Q9XI90) Probable WRKY transcription factor 4 (WRKY DNA-binding| protein 4) Length = 514 Score = 34.7 bits (78), Expect = 0.13 Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 4/67 (5%) Frame = +3 Query: 288 ESSLTVNVSAQNQPVGMVGLTDSMPAEVGTSEP--QQMNSSDNAMQEPQSENV--ADKSA 455 +++ + + P V S A++ TS P Q +SD + E +S+ DK A Sbjct: 169 QANANMQPQTEYPPPSQVQSFSSGQAQIPTSAPLPAQRETSDVTIIEHRSQQPLNVDKPA 228 Query: 456 DDGYNWR 476 DDGYNWR Sbjct: 229 DDGYNWR 235
>WRKY3_ARATH (Q9ZQ70) Probable WRKY transcription factor 3 (WRKY DNA-binding| protein 3) Length = 513 Score = 33.9 bits (76), Expect = 0.22 Identities = 15/34 (44%), Positives = 19/34 (55%) Frame = +3 Query: 375 TSEPQQMNSSDNAMQEPQSENVADKSADDGYNWR 476 TS+ Q+ S + + ADK ADDGYNWR Sbjct: 223 TSQGQRETSEISVFEHRSQPQNADKPADDGYNWR 256
>SAV_DROME (Q9VCR6) Scaffold protein salvador (Shar-pei)| Length = 608 Score = 32.0 bits (71), Expect = 0.85 Identities = 17/61 (27%), Positives = 31/61 (50%) Frame = -1 Query: 468 CSHHLPTCQQHFQTAALAWHCQSYSSAAAQMYQLQQACCQSNQPFQQVGSEHLHSL*DST 289 C+ P+C+ H ++++ + + S + + Y ++A QS P QQ H HSL + Sbjct: 62 CASTSPSCEFHPRSSSTSRNTYSCTDSQPDYYHARRA--QSQMPLQQHSHSHPHSLPHPS 119 Query: 288 H 286 H Sbjct: 120 H 120
>CCD53_HUMAN (Q9Y3C0) Coiled-coil domain-containing protein 53| Length = 194 Score = 30.8 bits (68), Expect = 1.9 Identities = 14/56 (25%), Positives = 31/56 (55%), Gaps = 2/56 (3%) Frame = +3 Query: 306 NVSAQNQPVGMVGLTDSMPAEVGTSEPQQMNSSDNAMQEPQ--SENVADKSADDGY 467 +V+ + P+ + +T+ E + +PQQ ++ D+ +QE + +EN+ + D Y Sbjct: 81 DVTVEVSPLNVTSVTNGAHPEATSEQPQQNSTQDSGLQESEVSAENILTVAKDPRY 136
>FUMC_PSESM (Q885V0) Fumarate hydratase class II (EC 4.2.1.2) (Fumarase C)| Length = 464 Score = 30.4 bits (67), Expect = 2.5 Identities = 10/31 (32%), Positives = 22/31 (70%) Frame = -2 Query: 440 NIFRLRLLHGIVRAIHLLRLRCTNFSRHAVS 348 N+++ ++H ++++I LL C+NF+ H V+ Sbjct: 357 NVYKPVIIHNVLQSIRLLADGCSNFNEHCVA 387
>FUMC_PSEPK (Q88M20) Fumarate hydratase class II (EC 4.2.1.2) (Fumarase C)| Length = 464 Score = 30.4 bits (67), Expect = 2.5 Identities = 11/31 (35%), Positives = 21/31 (67%) Frame = -2 Query: 440 NIFRLRLLHGIVRAIHLLRLRCTNFSRHAVS 348 N+F+ ++H ++++I LL C NF +H V+ Sbjct: 357 NVFKPVIIHNLLQSIELLADGCRNFQQHCVA 387
>UL25_SHV21 (Q01004) Virion gene 19 protein| Length = 543 Score = 29.3 bits (64), Expect = 5.5 Identities = 11/30 (36%), Positives = 16/30 (53%) Frame = +3 Query: 120 GSRDFEFKPHLNSSSQSLAPAMSDLKKHEH 209 G F F P +N ++ S+AP D K +H Sbjct: 270 GGNGFSFSPQVNEATSSIAPPNKDTKYSQH 299
>FUMC_SYNY3 (Q55674) Fumarate hydratase class II (EC 4.2.1.2) (Fumarase C)| Length = 466 Score = 29.3 bits (64), Expect = 5.5 Identities = 10/30 (33%), Positives = 19/30 (63%) Frame = -2 Query: 440 NIFRLRLLHGIVRAIHLLRLRCTNFSRHAV 351 N+F+ ++H + ++HLL C +F +H V Sbjct: 360 NVFKPVIIHNFLHSLHLLSDACASFRQHLV 389
>NELFA_DROME (Q86NP2) Negative elongation factor A homolog| Length = 1248 Score = 28.9 bits (63), Expect = 7.2 Identities = 10/24 (41%), Positives = 18/24 (75%) Frame = +3 Query: 381 EPQQMNSSDNAMQEPQSENVADKS 452 EPQQ+N S +++EPQ + ++ K+ Sbjct: 341 EPQQLNQSAGSLEEPQDDEMSGKA 364
>SYL_BURPS (Q63QT6) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)| (LeuRS) Length = 864 Score = 28.5 bits (62), Expect = 9.4 Identities = 16/46 (34%), Positives = 26/46 (56%) Frame = +3 Query: 291 SSLTVNVSAQNQPVGMVGLTDSMPAEVGTSEPQQMNSSDNAMQEPQ 428 + +TV+ + +PVG V +D P E+G E +M+ S N +PQ Sbjct: 593 ADVTVSFDDKGRPVGAVLKSDGQPVELGGIE--KMSKSKNNGVDPQ 636
>SYL_BURMA (Q62H20) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)| (LeuRS) Length = 864 Score = 28.5 bits (62), Expect = 9.4 Identities = 16/46 (34%), Positives = 26/46 (56%) Frame = +3 Query: 291 SSLTVNVSAQNQPVGMVGLTDSMPAEVGTSEPQQMNSSDNAMQEPQ 428 + +TV+ + +PVG V +D P E+G E +M+ S N +PQ Sbjct: 593 ADVTVSFDDKGRPVGAVLKSDGQPVELGGIE--KMSKSKNNGVDPQ 636
>FUMC2_BRAJA (Q89XM2) Fumarate hydratase class II 2 (EC 4.2.1.2) (Fumarase C 2)| Length = 478 Score = 28.5 bits (62), Expect = 9.4 Identities = 14/48 (29%), Positives = 25/48 (52%) Frame = -2 Query: 449 LVSNIFRLRLLHGIVRAIHLLRLRCTNFSRHAVSQTNHSNRLVLSTYI 306 L N+++ ++H I +++ +L CTNF V T NR + Y+ Sbjct: 356 LEMNVYKPLIIHNIAQSVTILTDGCTNFRTFLVEGT-EPNRKKIKEYV 402
>TEGU_EHV1B (P28955) Large tegument protein| Length = 3421 Score = 28.5 bits (62), Expect = 9.4 Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 5/67 (7%) Frame = +3 Query: 276 PCSRESSLTVNVSAQNQPVGMVGLTDSM-PAEVGTSEPQQMNSSDN----AMQEPQSENV 440 PCS E + ++ PVG ++ S PA++ T+ PQ N+S++ +++ P Sbjct: 3087 PCSEEPK---RPTGRDTPVGSWNVSPSQAPADIPTAIPQNQNTSESPRTTSLKSPTRTVQ 3143 Query: 441 ADKSADD 461 + ADD Sbjct: 3144 SSMPADD 3150 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 64,232,679 Number of Sequences: 219361 Number of extensions: 1182203 Number of successful extensions: 3349 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 3218 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3345 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3188886965 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)