>YAB9_SCHPO (Q09809) Hypothetical protein C2G11.09 in chromosome I|
          Length = 796

 Score = 49.7 bits (117), Expect = 2e-06
 Identities = 27/94 (28%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
 Frame = +1

Query: 4   IAFVQTLANLEGIEKALPFLKPLIE-ADTIKSFIQGFLPGLALKIFLIVLPTILMFMSQF 180
           +  +    NL+ I +  P L  +IE    + S ++ FLP L   +F+ + P +  ++S  
Sbjct: 461 VGAIAVFINLDTIRRLWPELGRMIEDLPFLNSLLRTFLPTLVYSLFISISPFLFRWLSSM 520

Query: 181 EGLISQSSLERRTASKYFIFLFFNVFLGSIVTGS 282
           +GL S++  E     K + +LF N FL  ++ GS
Sbjct: 521 QGLSSRAEEEIYAVGKNYAYLFVNFFLVYVIAGS 554

>SPO75_YEAST (Q07798) Sporulation-specific protein 75|
          Length = 868

 Score = 42.7 bits (99), Expect = 2e-04
 Identities = 20/87 (22%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
 Frame = +1

Query: 4   IAFVQTLANLEGIEKALPFLKPL-IEADTIKSFIQGFLPGLALKIFLIVLPTILMFMSQF 180
           +AF+  ++ +  I   +PF K +  ++  I+   +  +P + L I + ++P    ++S  
Sbjct: 492 VAFLGLISQIPNISSLIPFTKIIHFQSPFIREVAKNLIPIVTLIIIIEIVPYFFRWLSYL 551

Query: 181 EGLISQSSLERRTASKYFIFLFFNVFL 261
            GL + + +E    + YF+F+F ++F+
Sbjct: 552 RGLKTGAQIEADVQNWYFVFVFIHLFV 578

>YM8G_YEAST (Q03516) Hypothetical 107.7 kDa protein in TSP3-IPP2 intergenic|
           region
          Length = 953

 Score = 38.5 bits (88), Expect = 0.004
 Identities = 23/95 (24%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
 Frame = +1

Query: 4   IAFVQTLANLEGIEKALPFLKPLIEADT-IKSFIQGFLPGLALKIFLIVLPTILMFMSQF 180
           +AFV  ++N+  +   + +LK + +    +   +    P +AL + +  LP  +  M+  
Sbjct: 406 VAFVGMISNITSLTNEVKWLKFIYKLPKQLLGLLTSLAPTVALAVLMSFLPKFIRGMAIT 465

Query: 181 EGLISQSSLERRTASKYFIFLFFNVFLGSIVTGSA 285
           +G  S+ ++E  T   YF F    VFL + ++ +A
Sbjct: 466 QGAPSKQNVEYFTQQAYFAFQVIQVFLVTTLSSAA 500

>YWFH_BACSU (P39644) Bacilysin biosynthesis oxidoreductase ywfH (EC 1.-.-.-)|
          Length = 259

 Score = 31.2 bits (69), Expect = 0.61
 Identities = 24/82 (29%), Positives = 36/82 (43%)
 Frame = -2

Query: 254 TLKNKNIKYLDAVLRSSDDCDINPSNCDMNISIVGSTMRKIFRASPGRNPWMNDLMVSAS 75
           T   K + Y+DA+ R+S     N     +NI  VG+  ++     PG N + N +M +A 
Sbjct: 109 TFTQKTVAYIDAIKRASSLMKQNEFGRIINI--VGNLWKE-----PGANMFTNSMMNAAL 161

Query: 74  IKGFRNGSAFSMPSRFARVCTN 9
           I   +N S    P      C N
Sbjct: 162 INASKNISIQLAPHNITVNCLN 183

>S29A1_HUMAN (Q99808) Equilibrative nucleoside transporter 1 (Equilibrative|
           nitrobenzylmercaptopurine riboside-sensitive nucleoside
           transporter) (Equilibrative NBMPR-sensitive nucleoside
           transporter) (Nucleoside transporter, es-type) (Solute
           carrier famil
          Length = 455

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 15/43 (34%), Positives = 25/43 (58%)
 Frame = +2

Query: 266 ALLQDLLWSKLNTYLHASANDIPRIIGVAIPMKATFFITYVMV 394
           A+L  LL++ LN++LH       RI+G  + +   F IT ++V
Sbjct: 87  AMLPLLLFTYLNSFLHQRIPQSVRILGSLVAILLVFLITAILV 129

>NU1C_SYNY3 (P26522) NAD(P)H-quinone oxidoreductase chain 1 (EC 1.6.5.-)|
           (NAD(P)H dehydrogenase I, chain 1) (NDH-1, chain 1)
          Length = 372

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 5/53 (9%)
 Frame = +1

Query: 82  DTIKSFIQ-----GFLPGLALKIFLIVLPTILMFMSQFEGLISQSSLERRTAS 225
           D   SF+Q     G  PGLA K+F I LP+ILM +    G++    LER+ ++
Sbjct: 6   DLQNSFLQSLQGFGLPPGLA-KLFWIPLPSILMIIGATVGVLVVVWLERKISA 57

>PCDH7_HUMAN (O60245) Protocadherin-7 precursor (Brain-heart protocadherin)|
           (BH-Pcdh)
          Length = 1069

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
 Frame = -2

Query: 278 PVTMLPKN---TL--KNKNIKYLDAVLRSSDDCDINPSNCDMNISIVGSTMRKIFRASP 117
           P   LPKN   TL   + N++ + A + ++D  D    N D+N SIVG    K+F   P
Sbjct: 740 PTVTLPKNISYTLLPPSSNVRTVVATVLATDSDD--GINADLNYSIVGGNPFKLFEIDP 796

>COG4_MOUSE (Q8R1U1) Conserved oligomeric Golgi complex component 4|
          Length = 785

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
 Frame = +1

Query: 4   IAFVQTLANLEGIEKALPFLKPLIEADTIKSFIQGFLPGLALKIFLIVLPTILMFMSQFE 183
           ++F+ TL N+E   + +  LK  +E+D  K F QG     A   F   L  +    ++F 
Sbjct: 542 LSFLVTLNNVEVCSENISTLKKTLESDCTKLFSQGIGGEQAQAKFDSCLSDLAAVSNKFR 601

Query: 184 GLISQSSLE-RRTASKYFIFLFFNVFL 261
            L+ +   E   +A K  +  + N FL
Sbjct: 602 DLLQEGLAELNSSAVKPQVQPWINTFL 628

>RELN_CHICK (O93574) Reelin (EC 3.4.21.-) (Fragment)|
          Length = 3209

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 12/29 (41%), Positives = 20/29 (68%)
 Frame = +2

Query: 281  LLWSKLNTYLHASANDIPRIIGVAIPMKA 367
            L WS L  +L ++++++ R I + IPMKA
Sbjct: 2005 LTWSLLQEFLFSNSSNVGRYIALEIPMKA 2033

>COG4_HUMAN (Q9H9E3) Conserved oligomeric Golgi complex component 4|
          Length = 785

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
 Frame = +1

Query: 4   IAFVQTLANLEGIEKALPFLKPLIEADTIKSFIQGFLPGLALKIFLIVLPTILMFMSQFE 183
           ++F+ TL N+E   + +  LK  +E+D  K F QG     A   F   L  +    ++F 
Sbjct: 542 MSFLVTLNNVEVCSENISTLKKTLESDCTKLFSQGIGGEQAQAKFDSCLSDLAAVSNKFR 601

Query: 184 GLISQSSLE-RRTASKYFIFLFFNVF 258
            L+ +   E   TA K  +  + N F
Sbjct: 602 DLLQEGLTELNSTAIKPQVQPWINSF 627

>COBQ_ANASP (Q8YUG9) Cobyric acid synthase|
          Length = 493

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 15/49 (30%), Positives = 21/49 (42%)
 Frame = -2

Query: 194 DINPSNCDMNISIVGSTMRKIFRASPGRNPWMNDLMVSASIKGFRNGSA 48
           D+N    D   S+ GS +  +F   P R  W+N L     +K    G A
Sbjct: 417 DVNLGLVDSCQSVWGSYLHGLFDNGPWRRAWLNRLRQQRGLKSLPTGVA 465

>S29A1_RAT (O54698) Equilibrative nucleoside transporter 1 (Equilibrative|
           nitrobenzylmercaptopurine riboside-sensitive nucleoside
           transporter) (Equilibrative NBMPR-sensitive nucleoside
           transporter) (Nucleoside transporter, es-type) (Solute
           carrier family
          Length = 456

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 13/43 (30%), Positives = 25/43 (58%)
 Frame = +2

Query: 266 ALLQDLLWSKLNTYLHASANDIPRIIGVAIPMKATFFITYVMV 394
           A+L  L+++ LN++LH   +   RI+G  + +   F +T  +V
Sbjct: 87  AMLPLLIFTCLNSFLHQKVSQSLRILGSLLAILLVFLVTATLV 129

>RADA_CHLTR (O84300) DNA repair protein radA homolog (DNA repair protein sms|
           homolog)
          Length = 454

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +2

Query: 224 PSILYSCSSMYFWGALLQDLLWSKLNTYLHASANDIP 334
           P  L  CS    W  L+++    KLNT  ++S++ IP
Sbjct: 19  PKWLGQCSGCLQWNTLVEERTAPKLNTSSYSSSSSIP 55

>MET18_YEAST (P40469) DNA repair/transcription protein MET18/MMS19|
          Length = 1032

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 15/32 (46%), Positives = 21/32 (65%)
 Frame = +1

Query: 181 EGLISQSSLERRTASKYFIFLFFNVFLGSIVT 276
           +GLI Q+SLE    +K FI L  N  +GS+V+
Sbjct: 800 KGLIMQNSLESSEIAKKFIDLLSNEEIGSLVS 831

>Y273_SYNY3 (P73894) Hypothetical protein slr0273|
          Length = 316

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = +1

Query: 115 PGLALKIFLIVLPTILMFMSQFEGLISQS 201
           P  AL +FL+ L T+L+F+ Q  G +SQ+
Sbjct: 100 PYAALLVFLLFLFTLLIFLGQLWGNVSQA 128

>IGFL2_HUMAN (Q6UWQ7) Insulin growth factor-like family member 2 precursor|
          Length = 119

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -3

Query: 403 PTIDHYVCYEKCCLHWYGYTND 338
           P    + C+E CCL  +G TND
Sbjct: 68  PPCTFWPCFELCCLDSFGLTND 89

>RELN_HUMAN (P78509) Reelin precursor (EC 3.4.21.-)|
          Length = 3460

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 11/29 (37%), Positives = 20/29 (68%)
 Frame = +2

Query: 281  LLWSKLNTYLHASANDIPRIIGVAIPMKA 367
            L WS L  +L ++++++ R I + IP+KA
Sbjct: 2256 LSWSLLQEFLFSNSSNVGRYIALEIPLKA 2284

>S29A1_MOUSE (Q9JIM1) Equilibrative nucleoside transporter 1 (Equilibrative|
           nitrobenzylmercaptopurine riboside-sensitive nucleoside
           transporter) (Equilibrative NBMPR-sensitive nucleoside
           transporter) (Nucleoside transporter, es-type) (Solute
           carrier famil
          Length = 459

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 13/43 (30%), Positives = 25/43 (58%)
 Frame = +2

Query: 266 ALLQDLLWSKLNTYLHASANDIPRIIGVAIPMKATFFITYVMV 394
           A+L  L+++ LN++LH   +   RI+G  + +   F +T  +V
Sbjct: 87  AMLPLLVFTCLNSFLHQRISQSVRILGSLLAILLVFLVTAALV 129

>YCJP_ECOLI (P77716) Inner membrane ABC transporter permease protein ycjP|
          Length = 280

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 12/68 (17%)
 Frame = +1

Query: 106 GFLPGLALKIFLIVLPTILMFMSQFEGLISQSSL------ERRTASKY------FIFLFF 249
           GF  GLAL + + + P  +M M+ F+G     SL      ++ T   Y       IF F 
Sbjct: 12  GFYCGLALFLIITLFPFFVMLMTSFKGAKEAISLHPTLLPQQWTLEHYVDIFNPMIFPFV 71

Query: 250 NVFLGSIV 273
           + F  S+V
Sbjct: 72  DYFRNSLV 79

>ERD1_YEAST (P16151) Protein ERD1|
          Length = 362

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = +3

Query: 219 CVQVFYILVLQCIFGEHCYRICFGASLIPTSMR 317
           CV +F+ L+ +C   ++C R C      P S+R
Sbjct: 122 CVTIFWFLLKECQIIKYCTRRCLLIESSPRSLR 154

>CD36_MESAU (P70110) Platelet glycoprotein 4 (Platelet glycoprotein IV) (GPIV)|
           (GPIIIB) (CD36 antigen) (PAS IV) (PAS-4 protein)
          Length = 471

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 16/58 (27%), Positives = 25/58 (43%)
 Frame = +2

Query: 227 SILYSCSSMYFWGALLQDLLWSKLNTYLHASANDIPRIIGVAIPMKATFFITYVMVDG 400
           S++    S  F    L++LLW   + +L      IP  +GV  P   T    Y + +G
Sbjct: 159 SLIKKSKSSMFQTRTLRELLWGYKDPFLSLVPYPIPTTVGVFYPYNDTADGVYKVFNG 216

>LPLA_THEAC (Q9HKT1) Lipoate-protein ligase A (EC 6.3.2.-)|
          Length = 262

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 18/51 (35%), Positives = 26/51 (50%)
 Frame = -2

Query: 221 AVLRSSDDCDINPSNCDMNISIVGSTMRKIFRASPGRNPWMNDLMVSASIK 69
           +V+RSSDD DI      MN ++V S       A PG    +ND+ +  + K
Sbjct: 89  SVVRSSDDMDITSMFRTMNEAVVNSLRILGLDARPGE---LNDVSIPVNKK 136


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,806,495
Number of Sequences: 219361
Number of extensions: 1025230
Number of successful extensions: 2865
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 2825
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2865
length of database: 80,573,946
effective HSP length: 111
effective length of database: 56,224,875
effective search space used: 1349397000
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)