>ARP8_SCHPO (Q9US07) Probable actin-related protein 8|
          Length = 620

 Score = 32.3 bits (72), Expect = 0.51
 Identities = 19/58 (32%), Positives = 28/58 (48%)
 Frame = -2

Query: 395 QLFQFSVWYLVPDVVSSVLKGKALDSILQSLTWSEATTQVE*MCSDLNFRESELVAVD 222
           QL Q+SV ++VPD+   V   K LD +   L + +A    E +C+      S    VD
Sbjct: 240 QLSQYSVIFIVPDLYDRVYVEKILDILFFDLHFGKAAIVQESLCTSFGAGMSAACVVD 297

>FCPE_PHATR (Q41093) Fucoxanthin-chlorophyll a-c binding protein E, chloroplast|
           precursor
          Length = 197

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = +1

Query: 25  ELVQFRAWIEAVVMPDWKAGEFEGQFKDEFAQ-GHNNLQEE 144
           ++V F  ++E  VM D   GEF G F+++F   G ++  EE
Sbjct: 121 QIVAFIGFLELAVMKDITGGEFVGDFRNDFIDFGWDSFDEE 161

>DNAA1_CHLTR (O84252) Chromosomal replication initiator protein dnaA 1|
          Length = 456

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
 Frame = +1

Query: 13  IKSGELVQFRAW---IEAVVMPDWKAGEFEGQFKDEFAQGHNNLQEEG 147
           I+SGE+ +FRA+   +EA+ + D +    +G  ++EF    N+L  EG
Sbjct: 187 IRSGEMQRFRAFYRNVEALFIEDIEVLSGKGATQEEFFHTFNSLHTEG 234

>DNAA1_CHLMU (Q9PKE4) Chromosomal replication initiator protein dnaA 1|
          Length = 456

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
 Frame = +1

Query: 13  IKSGELVQFRAW---IEAVVMPDWKAGEFEGQFKDEFAQGHNNLQEEG 147
           I+SGE+ +FRA+   +EA+ + D +    +G  ++EF    N+L  EG
Sbjct: 187 IRSGEMQRFRAFYRNVEALFIEDIEVLSGKGATQEEFFHTFNSLHTEG 234

>FCPF_PHATR (Q41094) Fucoxanthin-chlorophyll a-c binding protein F, chloroplast|
           precursor
          Length = 197

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = +1

Query: 25  ELVQFRAWIEAVVMPDWKAGEFEGQFKDEFAQ-GHNNLQEE 144
           ++V F  ++E  VM D   GEF G F++++   G ++  EE
Sbjct: 121 QIVAFIGFLEIAVMKDITGGEFPGDFRNDYIDFGWDSFDEE 161

>ATG18_KLULA (Q6CS21) Autophagy-related protein 18|
          Length = 500

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = +1

Query: 160 NISNKKLKHGITTQENPQGVVSTATNSDS 246
           +ISN +L H I T  N QG++S + NS++
Sbjct: 116 DISNMRLLHTIETSMNAQGIMSMSPNSEN 144

>FKH2_YEAST (P41813) Fork head protein homolog 2|
          Length = 862

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
 Frame = +1

Query: 160 NISNKKLKHGITTQENPQGVVSTAT-NSDSRKFKSEHIYSTCVVASDHVRDCKIESSAFP 336
           N +N K K+G  T  NP    ST T N+ + +  S       ++A++ V   K  S+A+P
Sbjct: 264 NNNNSKNKNGYFTSINPNYTASTTTSNTINPQAASPQGPPNTIIAANFVDSYK-SSNAYP 322

Query: 337 LSTDDTTSGTRYQTEN 384
            + D T+  +  +  N
Sbjct: 323 QALDFTSDLSHDENRN 338

>BSND_MOUSE (Q8VIM4) Barttin|
          Length = 307

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 26/121 (21%), Positives = 48/121 (39%), Gaps = 9/121 (7%)
 Frame = +1

Query: 1   GTRDIKSGELVQFRAWIEAVVMPDWKAGEFEGQFKDEFAQGHNNLQEEGAGPLNISNKKL 180
           G   ++ GE    +AW+EA V+    + E EG+     +Q   ++  +G+ PL   +  L
Sbjct: 136 GASSVREGEPRTAQAWMEAPVVVHRGSDENEGE--KSHSQSSPSVGPQGSAPLASFHDDL 193

Query: 181 KHGIT---------TQENPQGVVSTATNSDSRKFKSEHIYSTCVVASDHVRDCKIESSAF 333
             G +          ++ P   V  A+     +F    +      + D V D +   +A 
Sbjct: 194 DVGSSEGSSLQPSPNRDEPHRQVPWASRGPLDRFSDFALIDDTPTSEDTVLDGQAREAAL 253

Query: 334 P 336
           P
Sbjct: 254 P 254

>RGMB_MOUSE (Q7TQ33) RGM domain family member B precursor|
          Length = 436

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 21/56 (37%), Positives = 27/56 (48%)
 Frame = +1

Query: 100 FKDEFAQGHNNLQEEGAGPLNISNKKLKHGITTQENPQGVVSTATNSDSRKFKSEH 267
           FKD F       + EGA PL I N  L   +T      G  +TATN  +  FK++H
Sbjct: 177 FKDHF----QTCKVEGAWPL-IDNNYLSVQVTNVPVVPGSSATATNKVTIIFKAQH 227

>ATG18_CANGA (Q6FM63) Autophagy-related protein 18|
          Length = 505

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 11/29 (37%), Positives = 20/29 (68%)
 Frame = +1

Query: 160 NISNKKLKHGITTQENPQGVVSTATNSDS 246
           +I+N +L H I    NP+G+V+ + N+D+
Sbjct: 117 DINNMRLLHTIEIAPNPEGLVALSCNTDT 145


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.311    0.127    0.377 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,037,701
Number of Sequences: 219361
Number of extensions: 1177740
Number of successful extensions: 2318
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2293
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2318
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2511994855
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)