>PURL_COREF (Q8FMM3) Phosphoribosylformylglycinamidine synthase II (EC 6.3.5.3)|
           (FGAM synthase II)
          Length = 763

 Score = 33.9 bits (76), Expect = 0.098
 Identities = 26/72 (36%), Positives = 30/72 (41%), Gaps = 12/72 (16%)
 Frame = -3

Query: 202 GSDGLDCGVAGTAAAGDSVVDTLLTAVSLR--KAPAEESAVL*SVEKLCTTRTP------ 47
           G  GL C  +  AAAGD  +   L AV LR  K  A E     S E++C   TP      
Sbjct: 285 GGGGLACATSELAAAGDGGMRVNLDAVPLRAEKMSAAEILASESQERMCAVVTPENVEKF 344

Query: 46  ----ASWDSVAA 23
               A WD   A
Sbjct: 345 KQICAKWDVTVA 356

>PURL_NOCFA (Q5Z2C3) Phosphoribosylformylglycinamidine synthase II (EC 6.3.5.3)|
           (FGAM synthase II)
          Length = 764

 Score = 32.0 bits (71), Expect = 0.37
 Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
 Frame = -3

Query: 202 GSDGLDCGVAGTAAAGDSVVDTLLTAVSLRKAPAEESAVL--*SVEKLCTTRTPASWDSV 29
           G  GL C  +  AAAGD  +   L  V LR A    + +L   S E++C   TP + ++ 
Sbjct: 288 GGAGLSCATSELAAAGDGGMRIELDKVPLRAADMTPAEILSSESQERMCAVVTPENVEAF 347

Query: 28  AA 23
            A
Sbjct: 348 MA 349

>PURL_MYCTU (P0A5T8) Phosphoribosylformylglycinamidine synthase II (EC 6.3.5.3)|
           (FGAM synthase II)
          Length = 754

 Score = 30.8 bits (68), Expect = 0.83
 Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
 Frame = -3

Query: 202 GSDGLDCGVAGTAAAGDSVVDTLLTAVSLRKAPAEESAVL--*SVEKLCTTRTPASWDSV 29
           G  GL C  +  A+AGD  +   L +V LR      + VL   S E++C   +P + D+ 
Sbjct: 282 GGAGLSCATSELASAGDGGMTIQLDSVPLRAKEMTPAEVLCSESQERMCAVVSPKNVDAF 341

Query: 28  AA 23
            A
Sbjct: 342 LA 343

>PURL_MYCBO (P0A5T9) Phosphoribosylformylglycinamidine synthase II (EC 6.3.5.3)|
           (FGAM synthase II)
          Length = 754

 Score = 30.8 bits (68), Expect = 0.83
 Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
 Frame = -3

Query: 202 GSDGLDCGVAGTAAAGDSVVDTLLTAVSLRKAPAEESAVL--*SVEKLCTTRTPASWDSV 29
           G  GL C  +  A+AGD  +   L +V LR      + VL   S E++C   +P + D+ 
Sbjct: 282 GGAGLSCATSELASAGDGGMTIQLDSVPLRAKEMTPAEVLCSESQERMCAVVSPKNVDAF 341

Query: 28  AA 23
            A
Sbjct: 342 LA 343

>PURL_CORGL (Q8NMI5) Phosphoribosylformylglycinamidine synthase II (EC 6.3.5.3)|
           (FGAM synthase II)
          Length = 762

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 24/72 (33%), Positives = 28/72 (38%), Gaps = 12/72 (16%)
 Frame = -3

Query: 202 GSDGLDCGVAGTAAAGDSVVDTLLTAVSLR--KAPAEESAVL*SVEKLCTTRTP------ 47
           G  GL C  +  AAAGD  +   L  V LR     A E     S E++C   TP      
Sbjct: 285 GGGGLACATSELAAAGDGGMRVNLDNVPLRAENMSAAEILASESQERMCAVVTPENVERF 344

Query: 46  ----ASWDSVAA 23
               A WD   A
Sbjct: 345 LEICAKWDVTCA 356

>AROB_HAEIN (P43879) 3-dehydroquinate synthase (EC 4.2.3.4)|
          Length = 362

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 15/32 (46%), Positives = 19/32 (59%)
 Frame = +3

Query: 12  DVDGAATESHDAGVRVVQSFSTDYSTADSSAG 107
           DV G A  S+  GVR++Q  +T  S  DSS G
Sbjct: 108 DVAGFAAASYQRGVRLIQIPTTLLSQVDSSVG 139

>BCL6B_MOUSE (O88282) B-cell CLL/lymphoma 6 member B protein (Bcl6-associated|
           zinc finger protein)
          Length = 474

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 15/29 (51%), Positives = 16/29 (55%)
 Frame = -1

Query: 366 SSSPAEVCPPRSQTQCWVSSPPGSPERCE 280
           S  P EV PPR  T     +PPGSP R E
Sbjct: 141 SLRPVEVEPPRPPTV----APPGSPRRSE 165

>DPOL_WHV1 (P03160) P protein [Includes: DNA-directed DNA polymerase (EC|
           2.7.7.7); RNA-directed DNA polymerase (EC 2.7.7.49);
           Ribonuclease H (EC 3.1.26.4)]
          Length = 879

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -1

Query: 342 PPRSQTQCWVSSPPGSPER 286
           PP S+   W +SPP SP R
Sbjct: 842 PPTSRISLWAASPPVSPRR 860

>AROB_HAEI8 (Q4QNY2) 3-dehydroquinate synthase (EC 4.2.3.4)|
          Length = 362

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = +3

Query: 12  DVDGAATESHDAGVRVVQSFSTDYSTADSSAG 107
           DV G    S+  GVR++Q  +T  S  DSS G
Sbjct: 108 DVAGFVAASYQRGVRLIQMPTTLLSQVDSSVG 139


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,460,963
Number of Sequences: 219361
Number of extensions: 499671
Number of successful extensions: 2344
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2227
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2341
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 1402043640
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)