>ref|NM_186999.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1689

 Score =  172 bits (87), Expect = 5e-40
 Identities = 163/187 (87%), Gaps = 6/187 (3%)
 Strand = Plus / Plus

                                                                        
Query: 8    ggaggacgtggatggcgccgccaccgagtcccacgacgccggcgtgcgagttgtgcagag 67
            ||||||||  || |||||| || ||||| |||||| |||||||||||| || ||||||||
Sbjct: 851  ggaggacggcgacggcgccaccgccgagacccacgtcgccggcgtgcgcgtcgtgcagag 910

                                                                        
Query: 68   cttctcgacggactacagcaccgccgactcctcggccggcgccttccggagcgagacggc 127
            ||||||||||||| |||||||||||||   |||||||||| ||||||||||||| ||  |
Sbjct: 911  cttctcgacggacaacagcaccgccga---ctcggccggcaccttccggagcgacacccc 967

                                                                        
Query: 128  agtcagcagcgtgtccaccacggagtccccggccgcggcc---gtcccggctaccccgca 184
             ||||||||||||||||||||||||||||| ||||| |||   |||||||| ||||||||
Sbjct: 968  ggtcagcagcgtgtccaccacggagtcccccgccgccgccgcggtcccggccaccccgca 1027

                   
Query: 185  gtccaac 191
            |||||||
Sbjct: 1028 gtccaac 1034

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  172 bits (87), Expect = 5e-40
 Identities = 163/187 (87%), Gaps = 6/187 (3%)
 Strand = Plus / Plus

                                                                            
Query: 8        ggaggacgtggatggcgccgccaccgagtcccacgacgccggcgtgcgagttgtgcagag 67
                ||||||||  || |||||| || ||||| |||||| |||||||||||| || ||||||||
Sbjct: 23694247 ggaggacggcgacggcgccaccgccgagacccacgtcgccggcgtgcgcgtcgtgcagag 23694306

                                                                            
Query: 68       cttctcgacggactacagcaccgccgactcctcggccggcgccttccggagcgagacggc 127
                ||||||||||||| |||||||||||||   |||||||||| ||||||||||||| ||  |
Sbjct: 23694307 cttctcgacggacaacagcaccgccga---ctcggccggcaccttccggagcgacacccc 23694363

                                                                            
Query: 128      agtcagcagcgtgtccaccacggagtccccggccgcggcc---gtcccggctaccccgca 184
                 ||||||||||||||||||||||||||||| ||||| |||   |||||||| ||||||||
Sbjct: 23694364 ggtcagcagcgtgtccaccacggagtcccccgccgccgccgcggtcccggccaccccgca 23694423

                       
Query: 185      gtccaac 191
                |||||||
Sbjct: 23694424 gtccaac 23694430

>dbj|AP003803.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1060_D03
          Length = 102178

 Score =  172 bits (87), Expect = 5e-40
 Identities = 163/187 (87%), Gaps = 6/187 (3%)
 Strand = Plus / Plus

                                                                         
Query: 8     ggaggacgtggatggcgccgccaccgagtcccacgacgccggcgtgcgagttgtgcagag 67
             ||||||||  || |||||| || ||||| |||||| |||||||||||| || ||||||||
Sbjct: 38861 ggaggacggcgacggcgccaccgccgagacccacgtcgccggcgtgcgcgtcgtgcagag 38920

                                                                         
Query: 68    cttctcgacggactacagcaccgccgactcctcggccggcgccttccggagcgagacggc 127
             ||||||||||||| |||||||||||||   |||||||||| ||||||||||||| ||  |
Sbjct: 38921 cttctcgacggacaacagcaccgccga---ctcggccggcaccttccggagcgacacccc 38977

                                                                         
Query: 128   agtcagcagcgtgtccaccacggagtccccggccgcggcc---gtcccggctaccccgca 184
              ||||||||||||||||||||||||||||| ||||| |||   |||||||| ||||||||
Sbjct: 38978 ggtcagcagcgtgtccaccacggagtcccccgccgccgccgcggtcccggccaccccgca 39037

                    
Query: 185   gtccaac 191
             |||||||
Sbjct: 39038 gtccaac 39044

>dbj|AK071269.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023088L08, full
            insert sequence
          Length = 1690

 Score =  172 bits (87), Expect = 5e-40
 Identities = 163/187 (87%), Gaps = 6/187 (3%)
 Strand = Plus / Plus

                                                                        
Query: 8    ggaggacgtggatggcgccgccaccgagtcccacgacgccggcgtgcgagttgtgcagag 67
            ||||||||  || |||||| || ||||| |||||| |||||||||||| || ||||||||
Sbjct: 852  ggaggacggcgacggcgccaccgccgagacccacgtcgccggcgtgcgcgtcgtgcagag 911

                                                                        
Query: 68   cttctcgacggactacagcaccgccgactcctcggccggcgccttccggagcgagacggc 127
            ||||||||||||| |||||||||||||   |||||||||| ||||||||||||| ||  |
Sbjct: 912  cttctcgacggacaacagcaccgccga---ctcggccggcaccttccggagcgacacccc 968

                                                                        
Query: 128  agtcagcagcgtgtccaccacggagtccccggccgcggcc---gtcccggctaccccgca 184
             ||||||||||||||||||||||||||||| ||||| |||   |||||||| ||||||||
Sbjct: 969  ggtcagcagcgtgtccaccacggagtcccccgccgccgccgcggtcccggccaccccgca 1028

                   
Query: 185  gtccaac 191
            |||||||
Sbjct: 1029 gtccaac 1035

>gb|AY596584.1| Saccharum officinarum clone SCCCRZ1003F10, complete sequence
          Length = 2010

 Score =  121 bits (61), Expect = 2e-24
 Identities = 134/157 (85%), Gaps = 6/157 (3%)
 Strand = Plus / Minus

                                                                       
Query: 38  ccacgacgccggcgtgcgagttgtgcagagcttctcgacggactacagcaccgccgactc 97
           ||||||||||||||||||  | ||| ||| |||||| |||||| ||||||||||||||||
Sbjct: 908 ccacgacgccggcgtgcgcctcgtggagaccttctccacggacaacagcaccgccgactc 849

                                                                       
Query: 98  ctcggccggcgccttccggagcgagacggcagtcagcagcgtgtccaccacggagtccc- 156
              ||  ||||||||||||||||| ||| | |||||||||||||||||||||||||||| 
Sbjct: 848 ---ggtgggcgccttccggagcgacacgccggtcagcagcgtgtccaccacggagtcccc 792

                                                
Query: 157 --cggccgcggccgtcccggctaccccgcagtccaac 191
             | ||||||||  ||||||| ||||| |||||||||
Sbjct: 791 cgccgccgcggcgttcccggccacccctcagtccaac 755



 Score = 44.1 bits (22), Expect = 0.32
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                             
Query: 264 gcggaggtcgattcgtctcacaccgttcaggagagcccggcggtgaactc 313
           ||||||||||| ||||| | |||||| ||||||  |||||||| ||||||
Sbjct: 679 gcggaggtcgactcgtcccgcaccgtccaggaggtcccggcggcgaactc 630

>gb|AY107407.1| Zea mays PCO113924 mRNA sequence
          Length = 773

 Score =  121 bits (61), Expect = 2e-24
 Identities = 134/157 (85%), Gaps = 6/157 (3%)
 Strand = Plus / Plus

                                                                       
Query: 38  ccacgacgccggcgtgcgagttgtgcagagcttctcgacggactacagcaccgccgactc 97
           ||||||||||||||||||  | ||| ||||||||||||||||| ||||||||||||||||
Sbjct: 468 ccacgacgccggcgtgcgcctcgtggagagcttctcgacggacaacagcaccgccgactc 527

                                                                       
Query: 98  ctcggccggcgccttccggagcgagacggcagtcagcagcgtgtccaccacggagtccc- 156
              ||   || ||||||||||||| ||| | |||||||||||||||||||||||||||| 
Sbjct: 528 ---ggtgagcaccttccggagcgacacgccggtcagcagcgtgtccaccacggagtcccc 584

                                                
Query: 157 --cggccgcggccgtcccggctaccccgcagtccaac 191
             | ||||||||  ||||||| ||||| |||||||||
Sbjct: 585 cgctgccgcggcgttcccggccacccctcagtccaac 621

>gb|AY104945.1| Zea mays PCO113923 mRNA sequence
          Length = 1032

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 84/96 (87%), Gaps = 3/96 (3%)
 Strand = Plus / Plus

                                                                       
Query: 66  agcttctcgacggactacagcaccgccgactcctcggccggcgccttccggagcgagacg 125
           ||||||||||||||| ||||||||||||||||   ||  |||||||||| |||||| |||
Sbjct: 179 agcttctcgacggacaacagcaccgccgactc---ggtgggcgccttccagagcgacacg 235

                                               
Query: 126 gcagtcagcagcgtgtccaccacggagtccccggcc 161
            | |||||||||||||| |||||||||| |||||||
Sbjct: 236 ccggtcagcagcgtgtctaccacggagttcccggcc 271

>gb|AE009055.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 81 of
            256 of the complete sequence
          Length = 9936

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 257  ggacgcggcggaggtcgattc 277
            |||||||||||||||||||||
Sbjct: 4588 ggacgcggcggaggtcgattc 4608

>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome
          Length = 2841581

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 257    ggacgcggcggaggtcgattc 277
              |||||||||||||||||||||
Sbjct: 890098 ggacgcggcggaggtcgattc 890118

>emb|AL611950.17| Mouse DNA sequence from clone RP23-45A18 on chromosome 4, complete
             sequence
          Length = 161331

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 219   tcctcagcaggccagaaggag 239
             |||||||||||||||||||||
Sbjct: 46300 tcctcagcaggccagaaggag 46320

>gb|AC152106.2| Ostreococcus sp. CCE9901 clone JGIACFB-9A4, complete sequence
          Length = 34754

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 249   gacgcggcggacgcggcgga 268
             ||||||||||||||||||||
Sbjct: 25105 gacgcggcggacgcggcgga 25086

>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 92      cgactcctcggccggcgcct 111
               ||||||||||||||||||||
Sbjct: 3522955 cgactcctcggccggcgcct 3522974

>ref|XM_520380.1| PREDICTED: Pan troglodytes LOC464875 (LOC464875), mRNA
          Length = 3663

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 10  aggacgtggatggcgccgcc 29
           ||||||||||||||||||||
Sbjct: 233 aggacgtggatggcgccgcc 252

>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 249     gacgcggcggacgcggcgga 268
               ||||||||||||||||||||
Sbjct: 3117742 gacgcggcggacgcggcgga 3117723

>gb|AC146111.3| Pan troglodytes BAC clone RP43-38O16 from 7, complete sequence
          Length = 158242

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 247   cagacgcggcggacgcggcg 266
             ||||||||||||||||||||
Sbjct: 19952 cagacgcggcggacgcggcg 19971

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 250     acgcggcggacgcggcggag 269
               ||||||||||||||||||||
Sbjct: 1386863 acgcggcggacgcggcggag 1386882

>gb|AF142435.1| Frankia sp. ACN14a/ts-r 20S proteasome beta-subunit precursor (prcB)
            and 20S proteasome alpha-subunit (prcA) genes, complete
            cds; putative dienelactone hydrolase-like protein gene,
            partial cds; and unknown genes
          Length = 4725

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 29   caccgagtcccacgacgccg 48
            ||||||||||||||||||||
Sbjct: 1737 caccgagtcccacgacgccg 1718

>gb|AC004990.1| Homo sapiens PAC clone RP5-1185I7 from 7, complete sequence
          Length = 154405

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 247    cagacgcggcggacgcggcg 266
              ||||||||||||||||||||
Sbjct: 123115 cagacgcggcggacgcggcg 123096

>emb|Y10293.1|SPSTTABCD Streptomyces spp. sttA, sttB, sttC, sttD and sttR genes
          Length = 5213

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 249  gacgcggcggacgcggcgga 268
            ||||||||||||||||||||
Sbjct: 2694 gacgcggcggacgcggcgga 2713

>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 249     gacgcggcggacgcggcgga 268
               ||||||||||||||||||||
Sbjct: 2847823 gacgcggcggacgcggcgga 2847804

>emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete genome; segment 9/29
          Length = 300800

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 253    cggcggacgcggcggaggtc 272
              ||||||||||||||||||||
Sbjct: 208319 cggcggacgcggcggaggtc 208338

>gb|AC119747.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1293G11,
             from chromosome 3, complete sequence
          Length = 147806

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 250   acgcggcggacgcggcggag 269
             ||||||||||||||||||||
Sbjct: 48366 acgcggcggacgcggcggag 48385

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 250     acgcggcggacgcggcggag 269
               ||||||||||||||||||||
Sbjct: 1386861 acgcggcggacgcggcggag 1386880

>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 252    gcggcggacgcggcggaggt 271
              ||||||||||||||||||||
Sbjct: 560774 gcggcggacgcggcggaggt 560755

>dbj|AK105735.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-H11, full
           insert sequence
          Length = 2291

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 250 acgcggcggacgcggcggag 269
           ||||||||||||||||||||
Sbjct: 666 acgcggcggacgcggcggag 685

>dbj|AK102524.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033096A14, full
            insert sequence
          Length = 2725

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 250  acgcggcggacgcggcggag 269
            ||||||||||||||||||||
Sbjct: 1115 acgcggcggacgcggcggag 1134

>gb|AF038563.1|AF038563 Homo sapiens membrane associated guanylate kinase 2 (MAGI-2) mRNA,
            complete cds
          Length = 4929

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 247  cagacgcggcggacgcggcg 266
            ||||||||||||||||||||
Sbjct: 4318 cagacgcggcggacgcggcg 4337

>ref|NM_012301.3| Homo sapiens membrane associated guanylate kinase, WW and PDZ domain
            containing 2 (MAGI2), mRNA
          Length = 6880

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 247  cagacgcggcggacgcggcg 266
            ||||||||||||||||||||
Sbjct: 4318 cagacgcggcggacgcggcg 4337

>dbj|AB014605.2| Homo sapiens mRNA for KIAA0705 protein, partial cds
          Length = 6795

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 247  cagacgcggcggacgcggcg 266
            ||||||||||||||||||||
Sbjct: 4257 cagacgcggcggacgcggcg 4276


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,254,752
Number of Sequences: 3902068
Number of extensions: 2254752
Number of successful extensions: 45102
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 44667
Number of HSP's gapped (non-prelim): 425
length of query: 378
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 356
effective length of database: 17,147,199,772
effective search space: 6104403118832
effective search space used: 6104403118832
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)