>ZFNL1_ORYSA (Q5NAW2) Zinc finger CCCH type domain-containing protein ZFN-like 1|
Length = 476
Score = 297 bits (760), Expect = 9e-81
Identities = 125/143 (87%), Positives = 138/143 (96%)
Frame = +2
Query: 14 DCIYYLRTGACGFGDRCRYNHPRDRGGTEFGGGAKNAVALDYPERLGQPVCEYYMKTGTC 193
DC+YYLRTGACGFGDRCRYNHPRDRGGTEFGGGA+NA ALDYPER GQP+CEYYMKTGTC
Sbjct: 64 DCVYYLRTGACGFGDRCRYNHPRDRGGTEFGGGARNAAALDYPERAGQPICEYYMKTGTC 123
Query: 194 KFGSNCKYHHPKQDGSVQPVMLNSNGFPLRPGEKECSYYMKTGQCKFGSTCKFHHPEFGG 373
KFG+NCKYHHPKQDG+V PVMLN++GFP+R GEKECSYYMKTGQCKFG+TCKFHHPEFGG
Sbjct: 124 KFGTNCKYHHPKQDGAVLPVMLNNSGFPIRLGEKECSYYMKTGQCKFGTTCKFHHPEFGG 183
Query: 374 VPVTPGIYPPLQSSTVSSPHPYA 442
VP+TPGIYPPLQS +++SPHPYA
Sbjct: 184 VPMTPGIYPPLQSPSIASPHPYA 206
Score = 103 bits (257), Expect = 2e-22
Identities = 52/134 (38%), Positives = 71/134 (52%), Gaps = 1/134 (0%)
Frame = +2
Query: 38 GACGFGDRCRYNHPRDRGGTEFGGGAKNAVALDYPERLGQPVCEYYMKTGTCKFGSNCKY 217
G G Y P + G + N +PER GQP C+YYM+TG CKFG+ CKY
Sbjct: 271 GHHGSSSTIAYGGPYVPYASSTGQSSNNQQEHGFPERPGQPDCQYYMRTGDCKFGATCKY 330
Query: 218 HHPKQ-DGSVQPVMLNSNGFPLRPGEKECSYYMKTGQCKFGSTCKFHHPEFGGVPVTPGI 394
HHP++ M+NS PLRPG + C+YY + G C++G CK+ HP G + +P
Sbjct: 331 HHPRELSAPKSGYMVNSLCLPLRPGAQPCAYYAQNGYCRYGVACKYDHP-MGTLGYSPSA 389
Query: 395 YPPLQSSTVSSPHP 436
P S +P+P
Sbjct: 390 LP--LSDMPIAPYP 401
Score = 73.6 bits (179), Expect = 2e-13
Identities = 36/91 (39%), Positives = 48/91 (52%)
Frame = +2
Query: 14 DCIYYLRTGACGFGDRCRYNHPRDRGGTEFGGGAKNAVALDYPERLGQPVCEYYMKTGTC 193
DC YY+RTG C FG C+Y+HPR+ + G N++ L P R G C YY + G C
Sbjct: 312 DCQYYMRTGDCKFGATCKYHHPRELSAPK-SGYMVNSLCL--PLRPGAQPCAYYAQNGYC 368
Query: 194 KFGSNCKYHHPKQDGSVQPVMLNSNGFPLRP 286
++G CKY HP P L + P+ P
Sbjct: 369 RYGVACKYDHPMGTLGYSPSALPLSDMPIAP 399
>ZFNL3_ORYSA (Q5NAV3) Zinc finger CCCH type domain-containing protein ZFN-like 3|
Length = 466
Score = 233 bits (593), Expect = 2e-61
Identities = 101/144 (70%), Positives = 116/144 (80%), Gaps = 1/144 (0%)
Frame = +2
Query: 11 ADCIYYLRTGACGFGDRCRYNHPRDRGGTE-FGGGAKNAVALDYPERLGQPVCEYYMKTG 187
ADC+YYLRTGACG+G+ CRYNHPRDR GG K + +YPER GQPVCEYYMK G
Sbjct: 55 ADCVYYLRTGACGYGENCRYNHPRDRAAAAVLNGGGKTTHSAEYPERPGQPVCEYYMKNG 114
Query: 188 TCKFGSNCKYHHPKQDGSVQPVMLNSNGFPLRPGEKECSYYMKTGQCKFGSTCKFHHPEF 367
TCKFGSNCKY HP++ GSVQ VMLNS+G+PLR GEK+C+YY+KTG CKFGSTCKFHHPE
Sbjct: 115 TCKFGSNCKYDHPRE-GSVQAVMLNSSGYPLRSGEKDCTYYVKTGHCKFGSTCKFHHPEI 173
Query: 368 GGVPVTPGIYPPLQSSTVSSPHPY 439
GGV TP +YPP+Q +SS HPY
Sbjct: 174 GGVSETPNMYPPVQPQPISSSHPY 197
Score = 102 bits (255), Expect = 3e-22
Identities = 44/76 (57%), Positives = 55/76 (72%), Gaps = 1/76 (1%)
Frame = +2
Query: 137 YPERLGQPVCEYYMKTGTCKFGSNCKYHHPKQDGSVQP-VMLNSNGFPLRPGEKECSYYM 313
+P R GQP C+YY+KTG+CKFGS CKYHHP+ + + ML+ G PLRPG + C+YY
Sbjct: 296 FPARPGQPECQYYLKTGSCKFGSACKYHHPQYLNTPKSNCMLSPLGLPLRPGSQPCAYYT 355
Query: 314 KTGQCKFGSTCKFHHP 361
+ G CKFG TCKF HP
Sbjct: 356 QHGFCKFGPTCKFDHP 371
Score = 67.8 bits (164), Expect = 1e-11
Identities = 34/93 (36%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
Frame = +2
Query: 14 DCIYYLRTGACGFGDRCRYNHPRDRGGTEFGGGAKNAVA--LDYPERLGQPVCEYYMKTG 187
+C YYL+TG+C FG C+Y+HP+ + N + L P R G C YY + G
Sbjct: 304 ECQYYLKTGSCKFGSACKYHHPQYLNTPK-----SNCMLSPLGLPLRPGSQPCAYYTQHG 358
Query: 188 TCKFGSNCKYHHPKQDGSVQPVMLNSNGFPLRP 286
CKFG CK+ HP S P + P+ P
Sbjct: 359 FCKFGPTCKFDHPMGTLSYSPSASSITDLPIAP 391
Score = 65.9 bits (159), Expect = 4e-11
Identities = 25/45 (55%), Positives = 32/45 (71%)
Frame = +2
Query: 272 FPLRPGEKECSYYMKTGQCKFGSTCKFHHPEFGGVPVTPGIYPPL 406
FP RPG+ EC YY+KTG CKFGS CK+HHP++ P + + PL
Sbjct: 296 FPARPGQPECQYYLKTGSCKFGSACKYHHPQYLNTPKSNCMLSPL 340
>ZFNL3_ARATH (Q6NPN3) Zinc finger CCCH type domain-containing protein ZFN-like 3|
Length = 465
Score = 194 bits (493), Expect = 8e-50
Identities = 91/156 (58%), Positives = 109/156 (69%), Gaps = 14/156 (8%)
Frame = +2
Query: 14 DCIYYLRTGACGFGDRCRYNHPRDRGGTEFGGGAKNAVALDYPERLGQPVCEYYMKTGTC 193
DCIYYLRTG CG+G RCR+NHPR+R G A ++PER+GQPVC+++M+TGTC
Sbjct: 56 DCIYYLRTGVCGYGSRCRFNHPRNRAPVL---GGLRTEAGEFPERMGQPVCQHFMRTGTC 112
Query: 194 KFGSNCKYHHPKQDG---SVQPVMLNSNGFPLRPGEKECSYYMKTGQCKFGSTCKFHHPE 364
KFG++CKYHHP+Q G SV PV LN GFPLRPGEKECSY+M+TGQCKFGSTC++HHP
Sbjct: 113 KFGASCKYHHPRQGGGGDSVTPVSLNYMGFPLRPGEKECSYFMRTGQCKFGSTCRYHHPV 172
Query: 365 FGGVPVT-----------PGIYPPLQSSTVSSPHPY 439
GV P +YP LQS TV S Y
Sbjct: 173 PPGVQAPSQQQQQQLSAGPTMYPSLQSQTVPSSQQY 208
Score = 91.7 bits (226), Expect = 8e-19
Identities = 41/98 (41%), Positives = 59/98 (60%)
Frame = +2
Query: 137 YPERLGQPVCEYYMKTGTCKFGSNCKYHHPKQDGSVQPVMLNSNGFPLRPGEKECSYYMK 316
+P+R QP C+Y+M+TG CKFG++C++HHP + S + L+ G PLRPG C+++ +
Sbjct: 297 FPQRPEQPECQYFMRTGDCKFGTSCRFHHPMEAASPEASTLSHIGLPLRPGAVPCTHFAQ 356
Query: 317 TGQCKFGSTCKFHHPEFGGVPVTPGIYPPLQSSTVSSP 430
G CKFG CKF H G ++ Y P SS P
Sbjct: 357 HGICKFGPACKFDH-SLGSSSLS---YSPSPSSLTDMP 390
Score = 59.3 bits (142), Expect = 4e-09
Identities = 26/70 (37%), Positives = 37/70 (52%)
Frame = +2
Query: 14 DCIYYLRTGACGFGDRCRYNHPRDRGGTEFGGGAKNAVALDYPERLGQPVCEYYMKTGTC 193
+C Y++RTG C FG CR++HP + E A + P R G C ++ + G C
Sbjct: 305 ECQYFMRTGDCKFGTSCRFHHPMEAASPE----ASTLSHIGLPLRPGAVPCTHFAQHGIC 360
Query: 194 KFGSNCKYHH 223
KFG CK+ H
Sbjct: 361 KFGPACKFDH 370
Score = 50.4 bits (119), Expect = 2e-06
Identities = 21/48 (43%), Positives = 29/48 (60%), Gaps = 5/48 (10%)
Frame = +2
Query: 272 FPLRPGEKECSYYMKTGQCKFGSTCKFHHPE-----FGGVPVTPGIYP 400
FP RP E +C YY++TG C +GS C+F+HP GG+ G +P
Sbjct: 48 FPERPDEPDCIYYLRTGVCGYGSRCRFNHPRNRAPVLGGLRTEAGEFP 95
>ZFNL2_ARATH (Q9SQU4) Zinc finger CCCH type domain-containing protein ZFN-like 2|
Length = 437
Score = 185 bits (470), Expect = 4e-47
Identities = 91/160 (56%), Positives = 109/160 (68%), Gaps = 18/160 (11%)
Frame = +2
Query: 14 DCIYYLRTGACGFGDRCRYNHPRDRGGTEFGGGAKNAVALDYPERLGQPVCEYYMKTGTC 193
DCIYYLRTG CG+G RCR+NHPRDRG GG A AL PER+G PVC+++M+TGTC
Sbjct: 34 DCIYYLRTGVCGYGSRCRFNHPRDRGAV-IGGVRGEAGAL--PERMGHPVCQHFMRTGTC 90
Query: 194 KFGSNCKYHHPKQDG---SVQPVMLNSNGFPLRPGEKECSYYMKTGQCKFGSTCKFHHP- 361
KFG++CKYHHP+Q G SV PV L+ G+PLRPGEKECSYY++TGQCKFG TC+F+HP
Sbjct: 91 KFGASCKYHHPRQGGGGGSVAPVSLSYLGYPLRPGEKECSYYLRTGQCKFGLTCRFNHPV 150
Query: 362 --EFGGVPVTP------------GIYPPLQSSTVSSPHPY 439
G P P IYP LQS ++ S Y
Sbjct: 151 PLAVQGPPQQPQQQQPQPQPQLQTIYPTLQSQSIPSSQQY 190
Score = 96.7 bits (239), Expect = 2e-20
Identities = 43/102 (42%), Positives = 65/102 (63%), Gaps = 3/102 (2%)
Frame = +2
Query: 92 GTEFGGGAKNAVALDYPERLGQPVCEYYMKTGTCKFGSNCKYHHPKQDGSVQP---VMLN 262
GT + N+ + ++P+R QP C+Y+M+TG CKFGS+C+YHHP +V P ++L+
Sbjct: 264 GTYQSVPSSNSTSKEFPQRPDQPECQYFMRTGDCKFGSSCRYHHPVD--AVPPKTGIVLS 321
Query: 263 SNGFPLRPGEKECSYYMKTGQCKFGSTCKFHHPEFGGVPVTP 388
S G PLRPG +C+++ + G CKFG CKF H + +P
Sbjct: 322 SIGLPLRPGVAQCTHFAQHGICKFGPACKFDHSMSSSLSYSP 363
Score = 59.3 bits (142), Expect = 4e-09
Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Frame = +2
Query: 14 DCIYYLRTGACGFGDRCRYNHPRDRGGTEFGGGAKNAVALDYPERLGQPVCEYYMKTGTC 193
+C Y++RTG C FG CRY+HP D + G ++ P R G C ++ + G C
Sbjct: 287 ECQYFMRTGDCKFGSSCRYHHPVDAVPPKTGIVLS---SIGLPLRPGVAQCTHFAQHGIC 343
Query: 194 KFGSNCKYHHPKQDG-SVQPVMLNSNGFPLRP 286
KFG CK+ H S P + P+ P
Sbjct: 344 KFGPACKFDHSMSSSLSYSPSASSLTDMPVAP 375
Score = 48.5 bits (114), Expect = 7e-06
Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 5/48 (10%)
Frame = +2
Query: 272 FPLRPGEKECSYYMKTGQCKFGSTCKFHHPE-----FGGVPVTPGIYP 400
+P RP E +C YY++TG C +GS C+F+HP GGV G P
Sbjct: 26 YPERPDEPDCIYYLRTGVCGYGSRCRFNHPRDRGAVIGGVRGEAGALP 73
>ZFNL1_ARATH (Q84W91) Zinc finger CCCH type domain-containing protein ZFN-like 1|
Length = 468
Score = 178 bits (451), Expect = 6e-45
Identities = 80/140 (57%), Positives = 97/140 (69%), Gaps = 7/140 (5%)
Frame = +2
Query: 14 DCIYYLRTGACGFGDRCRYNHPRDRGGTEFGGGAKNAVALDYPERLGQPVCEYYMKTGTC 193
DC YY+RTG CG+G+RCRYNHPRDR E A YPER G+P C++Y+KTGTC
Sbjct: 50 DCAYYMRTGVCGYGNRCRYNHPRDRASVE----ATVRATGQYPERFGEPPCQFYLKTGTC 105
Query: 194 KFGSNCKYHHPKQ-DGSVQPVMLNSNGFPLRPGEKECSYYMKTGQCKFGSTCKFHHPEFG 370
KFG++CK+HHPK GS+ V LN G+P+R G+ ECSYY+KTGQCKFG TCKFHHP+
Sbjct: 106 KFGASCKFHHPKNAGGSMSHVPLNIYGYPVREGDNECSYYLKTGQCKFGITCKFHHPQPA 165
Query: 371 GVPV------TPGIYPPLQS 412
G V P YP +QS
Sbjct: 166 GTTVPPPPASAPQFYPSVQS 185
Score = 102 bits (254), Expect = 4e-22
Identities = 49/101 (48%), Positives = 66/101 (65%), Gaps = 3/101 (2%)
Frame = +2
Query: 137 YPERLGQPVCEYYMKTGTCKFGSNCKYHHPKQDGSVQP---VMLNSNGFPLRPGEKECSY 307
+PER G+P C+YY+KTG CKFG++CK+HHP+ V P +L+ G PLRPG + C++
Sbjct: 286 FPERPGEPECQYYLKTGDCKFGTSCKFHHPRD--RVPPRANCVLSPIGLPLRPGVQRCTF 343
Query: 308 YMKTGQCKFGSTCKFHHPEFGGVPVTPGIYPPLQSSTVSSP 430
Y++ G CKFGSTCKF HP G + Y P SS +P
Sbjct: 344 YVQNGFCKFGSTCKFDHP-MGTIR-----YNPSASSLADAP 378
Score = 102 bits (254), Expect = 4e-22
Identities = 40/79 (50%), Positives = 55/79 (69%)
Frame = +2
Query: 137 YPERLGQPVCEYYMKTGTCKFGSNCKYHHPKQDGSVQPVMLNSNGFPLRPGEKECSYYMK 316
YPER G P C YYM+TG C +G+ C+Y+HP+ SV+ + + +P R GE C +Y+K
Sbjct: 42 YPERPGAPDCAYYMRTGVCGYGNRCRYNHPRDRASVEATVRATGQYPERFGEPPCQFYLK 101
Query: 317 TGQCKFGSTCKFHHPEFGG 373
TG CKFG++CKFHHP+ G
Sbjct: 102 TGTCKFGASCKFHHPKNAG 120
Score = 67.8 bits (164), Expect = 1e-11
Identities = 32/73 (43%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Frame = +2
Query: 14 DCIYYLRTGACGFGDRCRYNHPRDRGGTEFGGGAKNAV--ALDYPERLGQPVCEYYMKTG 187
+C YYL+TG C FG C+++HPRDR N V + P R G C +Y++ G
Sbjct: 294 ECQYYLKTGDCKFGTSCKFHHPRDRVPPR-----ANCVLSPIGLPLRPGVQRCTFYVQNG 348
Query: 188 TCKFGSNCKYHHP 226
CKFGS CK+ HP
Sbjct: 349 FCKFGSTCKFDHP 361
Score = 63.9 bits (154), Expect = 2e-10
Identities = 28/60 (46%), Positives = 35/60 (58%), Gaps = 12/60 (20%)
Frame = +2
Query: 251 VMLNSNGFPLRPGEKECSYYMKTGQCKFGSTCKFHHPEFG------------GVPVTPGI 394
V+ FP RPGE EC YY+KTG CKFG++CKFHHP G+P+ PG+
Sbjct: 279 VIQKEQAFPERPGEPECQYYLKTGDCKFGTSCKFHHPRDRVPPRANCVLSPIGLPLRPGV 338
Score = 50.8 bits (120), Expect = 1e-06
Identities = 17/35 (48%), Positives = 27/35 (77%)
Frame = +2
Query: 257 LNSNGFPLRPGEKECSYYMKTGQCKFGSTCKFHHP 361
L S+ +P RPG +C+YYM+TG C +G+ C+++HP
Sbjct: 37 LGSDSYPERPGAPDCAYYMRTGVCGYGNRCRYNHP 71
>ZFNL2_ORYSA (Q5JLB5) Zinc finger CCCH type domain-containing protein ZFN-like 2|
Length = 439
Score = 174 bits (441), Expect = 9e-44
Identities = 81/146 (55%), Positives = 101/146 (69%), Gaps = 4/146 (2%)
Frame = +2
Query: 14 DCIYYLRTGACGFGDRCRYNHPRDRGGTEFGGGAKNAVALDYPERLGQPVCEYYMKTGTC 193
DC YYLRTG C FG CR+NHP+DR K +YPER+GQP C+YY+KTGTC
Sbjct: 85 DCTYYLRTGLCRFGMSCRFNHPQDRNLAIASARMKG----EYPERMGQPECQYYLKTGTC 140
Query: 194 KFGSNCKYHHPKQDGSVQP-VMLNSNGFPLRPGEKECSYYMKTGQCKFGSTCKFHHPE-F 367
KFG CK+HHP++ + V LN+ G+PLRP EKEC+YY+KTGQCK+G+TCKFHHPE F
Sbjct: 141 KFGPTCKFHHPREKAGIAGRVQLNTLGYPLRPSEKECAYYLKTGQCKYGNTCKFHHPELF 200
Query: 368 GGVPVTPG--IYPPLQSSTVSSPHPY 439
+ + G IYP + SS + P PY
Sbjct: 201 NAMASSRGSPIYPSVHSSATAGP-PY 225
Score = 99.0 bits (245), Expect = 5e-21
Identities = 42/76 (55%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
Frame = +2
Query: 137 YPERLGQPVCEYYMKTGTCKFGSNCKYHHPKQDGSVQP-VMLNSNGFPLRPGEKECSYYM 313
+PER QP C+YYMKTG CKFG+ CK+HHP+ P +L+ G PLRPGE+ C +Y
Sbjct: 329 FPERPDQPECQYYMKTGDCKFGAVCKFHHPRVRSMPTPDCVLSPVGLPLRPGEELCKFYS 388
Query: 314 KTGQCKFGSTCKFHHP 361
+ G CKFG+ CKF HP
Sbjct: 389 RYGICKFGANCKFDHP 404
Score = 65.9 bits (159), Expect = 4e-11
Identities = 30/71 (42%), Positives = 44/71 (61%)
Frame = +2
Query: 14 DCIYYLRTGACGFGDRCRYNHPRDRGGTEFGGGAKNAVALDYPERLGQPVCEYYMKTGTC 193
+C YY++TG C FG C+++HPR R + V L P R G+ +C++Y + G C
Sbjct: 337 ECQYYMKTGDCKFGAVCKFHHPRVR-SMPTPDCVLSPVGL--PLRPGEELCKFYSRYGIC 393
Query: 194 KFGSNCKYHHP 226
KFG+NCK+ HP
Sbjct: 394 KFGANCKFDHP 404
Score = 64.3 bits (155), Expect = 1e-10
Identities = 26/54 (48%), Positives = 32/54 (59%)
Frame = +2
Query: 245 QPVMLNSNGFPLRPGEKECSYYMKTGQCKFGSTCKFHHPEFGGVPVTPGIYPPL 406
Q + N FP RP + EC YYMKTG CKFG+ CKFHHP +P + P+
Sbjct: 320 QYALQRENVFPERPDQPECQYYMKTGDCKFGAVCKFHHPRVRSMPTPDCVLSPV 373
Score = 50.8 bits (120), Expect = 1e-06
Identities = 19/43 (44%), Positives = 31/43 (72%)
Frame = +2
Query: 236 GSVQPVMLNSNGFPLRPGEKECSYYMKTGQCKFGSTCKFHHPE 364
G++QP +P R GE +C+YY++TG C+FG +C+F+HP+
Sbjct: 70 GAMQP-----GPYPERSGEPDCTYYLRTGLCRFGMSCRFNHPQ 107
>ZFNL_PEA (Q9SWF9) Zinc finger CCCH type domain-containing protein ZFN-like|
Length = 417
Score = 159 bits (402), Expect = 3e-39
Identities = 76/152 (50%), Positives = 98/152 (64%), Gaps = 9/152 (5%)
Frame = +2
Query: 14 DCIYYLRTGACGFGDRCRYNHPRDRGGTEFGGGAKNAVAL-----DYPERLGQPVCEYYM 178
DC YY+RTG C FG CR+NHP +R K A+A ++PERLGQP C+YY+
Sbjct: 35 DCSYYIRTGLCRFGATCRFNHPPNR---------KLAIATARMKGEFPERLGQPECQYYL 85
Query: 179 KTGTCKFGSNCKYHHPKQDGSVQP-VMLNSNGFPLRPGEKECSYYMKTGQCKFGSTCKFH 355
KTGTCKFG+ C++HHPK V V LN G+PLRP E E +YY++TGQCKFG+TCKFH
Sbjct: 86 KTGTCKFGATCRFHHPKDKAGVAGRVALNILGYPLRPNESERAYYLRTGQCKFGNTCKFH 145
Query: 356 HPEFGGVPVT---PGIYPPLQSSTVSSPHPYA 442
HP+ + ++ +YP +QS T YA
Sbjct: 146 HPQPSNMVLSMRGSTVYPTVQSPTTPGQQSYA 177
Score = 94.7 bits (234), Expect = 9e-20
Identities = 40/76 (52%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
Frame = +2
Query: 137 YPERLGQPVCEYYMKTGTCKFGSNCKYHHPKQDGSVQP-VMLNSNGFPLRPGEKECSYYM 313
+PER QP C++YMKTG CKFG+ C++HHP++ P +L+ G PLRPGE C +Y
Sbjct: 275 FPERPDQPECQFYMKTGDCKFGAVCRFHHPRERQIPAPDCVLSPIGLPLRPGEPLCVFYS 334
Query: 314 KTGQCKFGSTCKFHHP 361
+ G CKFG +CKF HP
Sbjct: 335 RYGICKFGPSCKFDHP 350
Score = 67.0 bits (162), Expect = 2e-11
Identities = 28/71 (39%), Positives = 43/71 (60%)
Frame = +2
Query: 14 DCIYYLRTGACGFGDRCRYNHPRDRGGTEFGGGAKNAVALDYPERLGQPVCEYYMKTGTC 193
+C +Y++TG C FG CR++HPR+R + + P R G+P+C +Y + G C
Sbjct: 283 ECQFYMKTGDCKFGAVCRFHHPRER---QIPAPDCVLSPIGLPLRPGEPLCVFYSRYGIC 339
Query: 194 KFGSNCKYHHP 226
KFG +CK+ HP
Sbjct: 340 KFGPSCKFDHP 350
Score = 60.1 bits (144), Expect = 2e-09
Identities = 23/47 (48%), Positives = 30/47 (63%)
Frame = +2
Query: 266 NGFPLRPGEKECSYYMKTGQCKFGSTCKFHHPEFGGVPVTPGIYPPL 406
N FP RP + EC +YMKTG CKFG+ C+FHHP +P + P+
Sbjct: 273 NIFPERPDQPECQFYMKTGDCKFGAVCRFHHPRERQIPAPDCVLSPI 319
Score = 55.1 bits (131), Expect = 8e-08
Identities = 19/35 (54%), Positives = 28/35 (80%)
Frame = +2
Query: 257 LNSNGFPLRPGEKECSYYMKTGQCKFGSTCKFHHP 361
+ S +P PGE +CSYY++TG C+FG+TC+F+HP
Sbjct: 22 MESGPYPEHPGEPDCSYYIRTGLCRFGATCRFNHP 56
>ZFN1_ARATH (Q8GXX7) Zinc finger CCCH type domain-containing protein ZFN1|
Length = 397
Score = 150 bits (378), Expect = 2e-36
Identities = 66/118 (55%), Positives = 83/118 (70%), Gaps = 1/118 (0%)
Frame = +2
Query: 14 DCIYYLRTGACGFGDRCRYNHPRDRGGTEFGGGAKNAVALDYPERLGQPVCEYYMKTGTC 193
DC YY+RTG C FG CR+NHPRDR A + +YPER+GQP CEYY+KTGTC
Sbjct: 45 DCSYYIRTGLCRFGSTCRFNHPRDRELVI----ATARMRGEYPERIGQPECEYYLKTGTC 100
Query: 194 KFGSNCKYHHPK-QDGSVQPVMLNSNGFPLRPGEKECSYYMKTGQCKFGSTCKFHHPE 364
KFG CK+HHP+ + G V LN G+PLR E +C+Y+++TG CKFG TCKF+HP+
Sbjct: 101 KFGVTCKFHHPRNKAGIAGRVSLNMLGYPLRSNEVDCAYFLRTGHCKFGGTCKFNHPQ 158
Score = 101 bits (251), Expect = 1e-21
Identities = 43/76 (56%), Positives = 55/76 (72%), Gaps = 1/76 (1%)
Frame = +2
Query: 137 YPERLGQPVCEYYMKTGTCKFGSNCKYHHPKQDGSVQP-VMLNSNGFPLRPGEKECSYYM 313
+PER GQP C++YMKTG CKFG+ CK+HHP+ + P +L+S G PLRPGE C +Y
Sbjct: 271 FPERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQAPPPDCLLSSIGLPLRPGEPLCVFYT 330
Query: 314 KTGQCKFGSTCKFHHP 361
+ G CKFG +CKF HP
Sbjct: 331 RYGICKFGPSCKFDHP 346
Score = 99.8 bits (247), Expect = 3e-21
Identities = 40/75 (53%), Positives = 51/75 (68%)
Frame = +2
Query: 137 YPERLGQPVCEYYMKTGTCKFGSNCKYHHPKQDGSVQPVMLNSNGFPLRPGEKECSYYMK 316
YPER G+P C YY++TG C+FGS C+++HP+ V +P R G+ EC YY+K
Sbjct: 37 YPERPGEPDCSYYIRTGLCRFGSTCRFNHPRDRELVIATARMRGEYPERIGQPECEYYLK 96
Query: 317 TGQCKFGSTCKFHHP 361
TG CKFG TCKFHHP
Sbjct: 97 TGTCKFGVTCKFHHP 111
Score = 67.4 bits (163), Expect = 2e-11
Identities = 29/71 (40%), Positives = 45/71 (63%)
Frame = +2
Query: 14 DCIYYLRTGACGFGDRCRYNHPRDRGGTEFGGGAKNAVALDYPERLGQPVCEYYMKTGTC 193
+C +Y++TG C FG C+++HPRDR +++ L P R G+P+C +Y + G C
Sbjct: 279 ECQFYMKTGDCKFGTVCKFHHPRDRQAPP-PDCLLSSIGL--PLRPGEPLCVFYTRYGIC 335
Query: 194 KFGSNCKYHHP 226
KFG +CK+ HP
Sbjct: 336 KFGPSCKFDHP 346
Score = 61.2 bits (147), Expect = 1e-09
Identities = 23/32 (71%), Positives = 26/32 (81%)
Frame = +2
Query: 266 NGFPLRPGEKECSYYMKTGQCKFGSTCKFHHP 361
N FP RPG+ EC +YMKTG CKFG+ CKFHHP
Sbjct: 269 NVFPERPGQPECQFYMKTGDCKFGTVCKFHHP 300
Score = 57.8 bits (138), Expect = 1e-08
Identities = 20/35 (57%), Positives = 29/35 (82%)
Frame = +2
Query: 257 LNSNGFPLRPGEKECSYYMKTGQCKFGSTCKFHHP 361
+ + +P RPGE +CSYY++TG C+FGSTC+F+HP
Sbjct: 32 METGSYPERPGEPDCSYYIRTGLCRFGSTCRFNHP 66
>ZFN3_ARATH (Q8L7N8) Zinc finger CCCH type domain-containing protein ZFN3|
Length = 375
Score = 149 bits (375), Expect = 4e-36
Identities = 63/118 (53%), Positives = 80/118 (67%), Gaps = 1/118 (0%)
Frame = +2
Query: 14 DCIYYLRTGACGFGDRCRYNHPRDRGGTEFGGGAKNAVALDYPERLGQPVCEYYMKTGTC 193
DC YY+RTG C FG CR+NHP DR K +YPER+GQP CE+Y+KTGTC
Sbjct: 47 DCAYYIRTGLCRFGSTCRFNHPHDRKLVIATARIKG----EYPERIGQPECEFYLKTGTC 102
Query: 194 KFGSNCKYHHPKQDGSVQ-PVMLNSNGFPLRPGEKECSYYMKTGQCKFGSTCKFHHPE 364
KFG CK+HHP+ + V +N +PLRP E +CSY+++ GQCKFG TCKF+HP+
Sbjct: 103 KFGVTCKFHHPRNKAGIDGSVSVNVLSYPLRPNEDDCSYFLRIGQCKFGGTCKFNHPQ 160
Score = 108 bits (269), Expect = 8e-24
Identities = 62/178 (34%), Positives = 82/178 (46%), Gaps = 62/178 (34%)
Frame = +2
Query: 14 DCIYYLRTGACGFGDRCRYNH--------------------------------------- 76
DC Y+LR G C FG C++NH
Sbjct: 138 DCSYFLRIGQCKFGGTCKFNHPQTQSTNLMVSVRGSPVYSALQSLTGQPSYSWSRTSFVA 197
Query: 77 --PRDRGGTEFGGGAK-----------NAVALDY---------PERLGQPVCEYYMKTGT 190
PR + + F G++ N+V L + PER GQP C++YMKTG
Sbjct: 198 NPPRLQDPSGFASGSQGGLFSSGFHSGNSVPLGFYALPRENVFPERPGQPECQFYMKTGD 257
Query: 191 CKFGSNCKYHHPKQDGSVQP-VMLNSNGFPLRPGEKECSYYMKTGQCKFGSTCKFHHP 361
CKFG+ CK+HHP+ + P +L+S G PLRPGE C +Y + G CKFG +CKF HP
Sbjct: 258 CKFGTVCKFHHPRDRQTPPPDCVLSSVGLPLRPGEPLCVFYSRYGICKFGPSCKFDHP 315
Score = 97.4 bits (241), Expect = 1e-20
Identities = 41/86 (47%), Positives = 56/86 (65%), Gaps = 2/86 (2%)
Frame = +2
Query: 110 GAKNAVALD--YPERLGQPVCEYYMKTGTCKFGSNCKYHHPKQDGSVQPVMLNSNGFPLR 283
G+ + + +D YPER G+P C YY++TG C+FGS C+++HP V +P R
Sbjct: 28 GSDDTMGVDGSYPERHGEPDCAYYIRTGLCRFGSTCRFNHPHDRKLVIATARIKGEYPER 87
Query: 284 PGEKECSYYMKTGQCKFGSTCKFHHP 361
G+ EC +Y+KTG CKFG TCKFHHP
Sbjct: 88 IGQPECEFYLKTGTCKFGVTCKFHHP 113
>ZFNL4_ARATH (Q94AD9) Zinc finger CCCH type domain-containing protein ZFN-like 4|
Length = 404
Score = 149 bits (375), Expect = 4e-36
Identities = 65/120 (54%), Positives = 77/120 (64%), Gaps = 3/120 (2%)
Frame = +2
Query: 14 DCIYYLRTGACGFGDRCRYNHPRDRGGTEFGGGAKNAVAL---DYPERLGQPVCEYYMKT 184
DC +YLRTG CG+G CRYNHP VA + PER+GQP CEY++KT
Sbjct: 52 DCQFYLRTGLCGYGSSCRYNHPTH---------LPQDVAYYKEELPERIGQPDCEYFLKT 102
Query: 185 GTCKFGSNCKYHHPKQDGSVQPVMLNSNGFPLRPGEKECSYYMKTGQCKFGSTCKFHHPE 364
G CK+G CKYHHPK QPVM N G P+R GEK C YY++TG C+FG CKFHHP+
Sbjct: 103 GACKYGPTCKYHHPKDRNGAQPVMFNVIGLPMRLGEKPCPYYLRTGTCRFGVACKFHHPQ 162
Score = 87.8 bits (216), Expect = 1e-17
Identities = 37/74 (50%), Positives = 51/74 (68%)
Frame = +2
Query: 14 DCIYYLRTGACGFGDRCRYNHPRDRGGTEFGGGAKNAVALDYPERLGQPVCEYYMKTGTC 193
DC Y+L+TGAC +G C+Y+HP+DR G + N + L P RLG+ C YY++TGTC
Sbjct: 95 DCEYFLKTGACKYGPTCKYHHPKDRNGAQ--PVMFNVIGL--PMRLGEKPCPYYLRTGTC 150
Query: 194 KFGSNCKYHHPKQD 235
+FG CK+HHP+ D
Sbjct: 151 RFGVACKFHHPQPD 164
Score = 80.1 bits (196), Expect = 2e-15
Identities = 45/110 (40%), Positives = 57/110 (51%), Gaps = 3/110 (2%)
Frame = +2
Query: 122 AVALD--YPERLGQPVCEYYMKTGTCKFGSNCKYHHP-KQDGSVQPVMLNSNGFPLRPGE 292
AVAL+ E QP C ++M TGTCK+G +CKY HP + P ++N P RPG+
Sbjct: 251 AVALNRGLSESSDQPECRFFMNTGTCKYGDDCKYSHPGVRISQPPPSLINPFVLPARPGQ 310
Query: 293 KECSYYMKTGQCKFGSTCKFHHPEFGGVPVTPGIYPPLQSSTVSSPHPYA 442
C + G CKFG CKF HP YP L +T S P P+A
Sbjct: 311 PACGNFRSYGFCKFGPNCKFDHPMLP--------YPGLTMAT-SLPTPFA 351
Score = 62.0 bits (149), Expect = 6e-10
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Frame = +2
Query: 14 DCIYYLRTGACGFGDRCRYNHPRDRGGTEFGGGAKNAV-ALDYPERLGQPVCEYYMKTGT 190
+C +++ TG C +GD C+Y+HP G + + P R GQP C + G
Sbjct: 266 ECRFFMNTGTCKYGDDCKYSHP----GVRISQPPPSLINPFVLPARPGQPACGNFRSYGF 321
Query: 191 CKFGSNCKYHHP 226
CKFG NCK+ HP
Sbjct: 322 CKFGPNCKFDHP 333
Score = 58.2 bits (139), Expect = 9e-09
Identities = 43/148 (29%), Positives = 56/148 (37%), Gaps = 33/148 (22%)
Frame = +2
Query: 17 CIYYLRTGACGFGDRCRYNHPRDRGGTEFGGGAKNAVALD-------------------- 136
C YYLRTG C FG C+++HP+ G G + A D
Sbjct: 141 CPYYLRTGTCRFGVACKFHHPQPDNGHSTAYGMSSFPAADLRYASGLTMMSTYGTLPRPQ 200
Query: 137 ----YPERLGQPVCEYYMKTGTCKF--GSNCKY---HHPKQDGS----VQPVMLNSNGFP 277
Y L P + G + SN Y + P GS V LN G
Sbjct: 201 VPQSYVPILVSPSQGFLPPQGWAPYMAASNSMYNVKNQPYYSGSSASMAMAVALN-RGLS 259
Query: 278 LRPGEKECSYYMKTGQCKFGSTCKFHHP 361
+ EC ++M TG CK+G CK+ HP
Sbjct: 260 ESSDQPECRFFMNTGTCKYGDDCKYSHP 287
Score = 50.8 bits (120), Expect = 1e-06
Identities = 16/32 (50%), Positives = 27/32 (84%)
Frame = +2
Query: 266 NGFPLRPGEKECSYYMKTGQCKFGSTCKFHHP 361
N +P RPGE++C +Y++TG C +GS+C+++HP
Sbjct: 42 NPYPDRPGERDCQFYLRTGLCGYGSSCRYNHP 73
>ZFN2_ARATH (O48772) Zinc finger CCCH type domain-containing protein ZFN2|
Length = 453
Score = 131 bits (330), Expect = 7e-31
Identities = 69/143 (48%), Positives = 80/143 (55%)
Frame = +2
Query: 14 DCIYYLRTGACGFGDRCRYNHPRDRGGTEFGGGAKNAVALDYPERLGQPVCEYYMKTGTC 193
DC ++LRTG CG+G+ CRYNHP T G PER+GQP CE TG C
Sbjct: 49 DCQFFLRTGQCGYGNSCRYNHPL----TNLPQGIIY-YRDQLPERVGQPDCE----TGAC 99
Query: 194 KFGSNCKYHHPKQDGSVQPVMLNSNGFPLRPGEKECSYYMKTGQCKFGSTCKFHHPEFGG 373
K+G CKYHHPK PV+ N G P+R GEK C YYM+TG C+FG CKFHHP
Sbjct: 100 KYGPTCKYHHPKDRNGAGPVLFNVLGLPMRQGEKPCPYYMQTGLCRFGVACKFHHPHPHS 159
Query: 374 VPVTPGIYPPLQSSTVSSPHPYA 442
P + G SS S PYA
Sbjct: 160 QP-SNGHSAYAMSSFPSVGFPYA 181
Score = 82.4 bits (202), Expect = 5e-16
Identities = 39/95 (41%), Positives = 54/95 (56%), Gaps = 1/95 (1%)
Frame = +2
Query: 164 CEYYMKTGTCKFGSNCKYHHPKQD-GSVQPVMLNSNGFPLRPGEKECSYYMKTGQCKFGS 340
C ++M TGTCK+G +CKY HPK+ P +LN P RPG+ C + G CKFG+
Sbjct: 267 CRFFMNTGTCKYGDDCKYSHPKERLLQSPPTLLNPIVLPARPGQPACGNFKAYGFCKFGA 326
Query: 341 TCKFHHPEFGGVPVTPGIYPPLQSSTVSSPHPYAP 445
CKF H + + P L S++ +P+PYAP
Sbjct: 327 NCKFDH----SMLLNPYNNTGLAMSSLPTPYPYAP 357
Score = 65.5 bits (158), Expect = 6e-11
Identities = 29/71 (40%), Positives = 43/71 (60%)
Frame = +2
Query: 11 ADCIYYLRTGACGFGDRCRYNHPRDRGGTEFGGGAKNAVALDYPERLGQPVCEYYMKTGT 190
A+C +++ TG C +GD C+Y+HP++R + N + L P R GQP C + G
Sbjct: 265 AECRFFMNTGTCKYGDDCKYSHPKER-LLQSPPTLLNPIVL--PARPGQPACGNFKAYGF 321
Query: 191 CKFGSNCKYHH 223
CKFG+NCK+ H
Sbjct: 322 CKFGANCKFDH 332
Score = 51.2 bits (121), Expect = 1e-06
Identities = 16/36 (44%), Positives = 30/36 (83%)
Frame = +2
Query: 254 MLNSNGFPLRPGEKECSYYMKTGQCKFGSTCKFHHP 361
M S+ +P RPGE++C ++++TGQC +G++C+++HP
Sbjct: 35 MEQSSPYPDRPGERDCQFFLRTGQCGYGNSCRYNHP 70
Score = 46.2 bits (108), Expect = 4e-05
Identities = 41/171 (23%), Positives = 62/171 (36%), Gaps = 41/171 (23%)
Frame = +2
Query: 17 CIYYLRTGACGFGDRCRYNHPRDRGGTEFGGGA---KNAVALDYPERLGQ---------- 157
C YY++TG C FG C+++HP G A + ++ +P G
Sbjct: 135 CPYYMQTGLCRFGVACKFHHPHPHSQPSNGHSAYAMSSFPSVGFPYASGMTMVSLPPATY 194
Query: 158 --------PVCEYYMKT--------------GTCKFGSNCKYHHPKQDGSVQP------V 253
P + YM T SN Y+ Q S V
Sbjct: 195 GAIPRPQVPQSQAYMPYMVAPSQGLLPPQGWATYMTASNPIYNMKTQLDSSSSASVAVTV 254
Query: 254 MLNSNGFPLRPGEKECSYYMKTGQCKFGSTCKFHHPEFGGVPVTPGIYPPL 406
+ + F R EC ++M TG CK+G CK+ HP+ + P + P+
Sbjct: 255 TSHHHSFSERA---ECRFFMNTGTCKYGDDCKYSHPKERLLQSPPTLLNPI 302
>ZFNL6_ARATH (Q9STM4) Putative zinc finger CCCH type domain-containing protein|
ZFN-like 6
Length = 448
Score = 115 bits (287), Expect = 6e-26
Identities = 54/120 (45%), Positives = 73/120 (60%), Gaps = 3/120 (2%)
Frame = +2
Query: 14 DCIYYLRTGACGFGDRCRYNHPRDRGGTEFGGGAKNAVAL--DYPERLGQPVCEYYMKTG 187
DC +Y+RTG+C FG C++NHP R +F N V D +LG C+YY +TG
Sbjct: 115 DCSFYMRTGSCKFGSSCKFNHPLAR---KFQIARDNKVREKEDDGGKLGLIDCKYYFRTG 171
Query: 188 TCKFGSNCKYHHP-KQDGSVQPVMLNSNGFPLRPGEKECSYYMKTGQCKFGSTCKFHHPE 364
CK+G C+++H + G LN G PLRPGE EC YYM+ G CK+G+ CKF+HP+
Sbjct: 172 GCKYGETCRFNHTIPKSGLASAPELNFLGLPLRPGEVECPYYMRNGSCKYGAECKFNHPD 231
Score = 98.6 bits (244), Expect = 6e-21
Identities = 43/78 (55%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Frame = +2
Query: 128 ALDYPERLGQPVCEYYMKTGTCKFGSNCKYHHPKQD-GSVQPVMLNSNGFPLRPGEKECS 304
A ++PER QP C YYMKTG CKF NCKYHHPK + P LN G PLRP + C+
Sbjct: 340 AEEFPERPDQPECSYYMKTGDCKFKFNCKYHHPKNRLPKLPPYALNDKGLPLRPDQNICT 399
Query: 305 YYMKTGQCKFGSTCKFHH 358
YY + G CKFG C+F H
Sbjct: 400 YYSRYGICKFGPACRFDH 417
Score = 65.1 bits (157), Expect = 8e-11
Identities = 48/165 (29%), Positives = 69/165 (41%), Gaps = 48/165 (29%)
Frame = +2
Query: 14 DCIYYLRTGACGFGDRCRYNHPRDR--GGTE---FGGGAKNAVALDYPERLGQPVCEYYM 178
+C YY+R G+C +G C++NHP GGT+ F G ++ P+ Q +
Sbjct: 209 ECPYYMRNGSCKYGAECKFNHPDPTTIGGTDSPSFRGNNGVSIGTFSPKATFQASSTSWS 268
Query: 179 K----TGTCKF------------GSNCKYH------HPKQDGSVQP----VMLNSNG--- 271
GT F N +++ + + G P +M NS+
Sbjct: 269 SPRHVNGTSPFIPVMLSQTHGVTSQNPEWNGYQASVYSSERGVFSPSTTYLMNNSSAETS 328
Query: 272 --------------FPLRPGEKECSYYMKTGQCKFGSTCKFHHPE 364
FP RP + ECSYYMKTG CKF CK+HHP+
Sbjct: 329 MLLSQYRHQMPAEEFPERPDQPECSYYMKTGDCKFKFNCKYHHPK 373
Score = 60.8 bits (146), Expect = 1e-09
Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 8/94 (8%)
Frame = +2
Query: 14 DCIYYLRTGACGFGDRCRYNHPRDRGGTEFGGGAKNAVALDYPERLGQPVCEYYMKTGTC 193
+C YY++TG C F C+Y+HP++R + A N L P R Q +C YY + G C
Sbjct: 351 ECSYYMKTGDCKFKFNCKYHHPKNR-LPKLPPYALNDKGL--PLRPDQNICTYYSRYGIC 407
Query: 194 KFGSNCKYHHPKQ--------DGSVQPVMLNSNG 271
KFG C++ H Q V+P +++NG
Sbjct: 408 KFGPACRFDHSVQPPYSTESSQAIVEPPQVSANG 441
Score = 59.7 bits (143), Expect = 3e-09
Identities = 21/34 (61%), Positives = 30/34 (88%)
Frame = +2
Query: 260 NSNGFPLRPGEKECSYYMKTGQCKFGSTCKFHHP 361
+ N +P+RPG ++CS+YM+TG CKFGS+CKF+HP
Sbjct: 103 SENVYPVRPGAEDCSFYMRTGSCKFGSSCKFNHP 136
>ZFNL5_ARATH (Q5RJC5) Zinc finger CCCH type domain-containing protein ZFN-like 5|
Length = 435
Score = 114 bits (286), Expect = 8e-26
Identities = 57/128 (44%), Positives = 78/128 (60%), Gaps = 7/128 (5%)
Frame = +2
Query: 14 DCIYYLRTGACGFGDRCRYNHPRDRGGTEFGGGAKNAVALDYPERLGQPV---CEYYMKT 184
DC +Y+RTG+C +G C++NHP R + G + D E + P C+YY +T
Sbjct: 106 DCSFYMRTGSCKYGSSCKFNHPVRR---KLQIGRERVRERD--EDVENPKLMECKYYFRT 160
Query: 185 GTCKFGSNCKYHHPKQDGSVQPVM-LNSNGFPLRPGEKECSYYMKTGQCKFGSTCKFHHP 361
G CK+G +C++ H K+ S V LN G P+RPGEKEC +YM+ G CKFGS CKF+HP
Sbjct: 161 GGCKYGESCRFSHMKEHNSPASVPELNFLGLPIRPGEKECPFYMRNGSCKFGSDCKFNHP 220
Query: 362 E---FGGV 376
+ GGV
Sbjct: 221 DPTAIGGV 228
Score = 90.9 bits (224), Expect = 1e-18
Identities = 43/99 (43%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Frame = +2
Query: 134 DYPERLGQPVCEYYMKTGTCKFGSNCKYHHPKQDGSVQPVM-LNSNGFPLRPGEKECSYY 310
++PER QP C YY+KTG CKF CKYHHPK Q N G PLRP + C++Y
Sbjct: 330 EFPERPDQPECTYYLKTGDCKFKYKCKYHHPKNRLPKQAAFSFNDKGLPLRPDQSMCTHY 389
Query: 311 MKTGQCKFGSTCKFHHPEFGGVPVTPGIYPPLQSSTVSS 427
+ G CKFG C+F H P + P S TV +
Sbjct: 390 SRYGICKFGPACRFDHS-------IPPTFSPSSSQTVEA 421
Score = 59.3 bits (142), Expect = 4e-09
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 7/93 (7%)
Frame = +2
Query: 14 DCIYYLRTGACGFGDRCRYNHPRDRGGTEFGGGAKNAVALDYPERLGQPVCEYYMKTGTC 193
+C YYL+TG C F +C+Y+HP++R + A + P R Q +C +Y + G C
Sbjct: 339 ECTYYLKTGDCKFKYKCKYHHPKNRLPKQ---AAFSFNDKGLPLRPDQSMCTHYSRYGIC 395
Query: 194 KFGSNCKYHH-------PKQDGSVQPVMLNSNG 271
KFG C++ H P +V+ + +NG
Sbjct: 396 KFGPACRFDHSIPPTFSPSSSQTVEARQVGANG 428
Score = 57.4 bits (137), Expect = 2e-08
Identities = 25/55 (45%), Positives = 41/55 (74%)
Frame = +2
Query: 197 FGSNCKYHHPKQDGSVQPVMLNSNGFPLRPGEKECSYYMKTGQCKFGSTCKFHHP 361
FGS+ K +++GS + +M+ +P+RP ++CS+YM+TG CK+GS+CKF+HP
Sbjct: 79 FGSDQK---EEEEGSEKRMMMV---YPVRPDSEDCSFYMRTGSCKYGSSCKFNHP 127
>MKRN2_MOUSE (Q9ERV1) Makorin-2|
Length = 416
Score = 45.4 bits (106), Expect = 6e-05
Identities = 30/97 (30%), Positives = 40/97 (41%), Gaps = 3/97 (3%)
Frame = +2
Query: 155 QPVCEYYMKTGTCKFGSNCKYHHPKQDGSVQPVMLNSNGFPLRPGEKECSYYMKTGQCKF 334
Q C Y+M G C+ GS C + H + + C YY K G C +
Sbjct: 5 QVTCRYFMH-GVCREGSQCLFSHDLANSKPSTI---------------CKYYQK-GYCAY 47
Query: 335 GSTCKFHH---PEFGGVPVTPGIYPPLQSSTVSSPHP 436
G+ C++ H P G V P P SS + SPHP
Sbjct: 48 GARCRYDHTKPPAAAGGAVGPAPNPS-PSSGLHSPHP 83
Score = 37.7 bits (86), Expect = 0.013
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +2
Query: 116 KNAVALDYPERLGQPVCEYYMK-TGTCKFGSNCKYHHPKQDG 238
KN + + + +G+ C+Y+ + GTC FGS C Y H DG
Sbjct: 311 KNELIEAFKQGMGKKACKYFEQGKGTCPFGSKCLYRHAYPDG 352
Score = 35.8 bits (81), Expect = 0.049
Identities = 19/71 (26%), Positives = 29/71 (40%)
Frame = +2
Query: 17 CIYYLRTGACGFGDRCRYNHPRDRGGTEFGGGAKNAVALDYPERLGQPVCEYYMKTGTCK 196
C Y++ G C G +C ++H D +C+YY K G C
Sbjct: 8 CRYFMH-GVCREGSQCLFSH-------------------DLANSKPSTICKYYQK-GYCA 46
Query: 197 FGSNCKYHHPK 229
+G+ C+Y H K
Sbjct: 47 YGARCRYDHTK 57
Score = 29.6 bits (65), Expect = 3.5
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 8 PADCIYYLRTGACGFGDRCRYNHPR 82
P+ Y + G C +G RCRY+H +
Sbjct: 33 PSTICKYYQKGYCAYGARCRYDHTK 57
Score = 28.5 bits (62), Expect = 7.9
Identities = 11/25 (44%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = +2
Query: 287 GEKECSYYMK-TGQCKFGSTCKFHH 358
G+K C Y+ + G C FGS C + H
Sbjct: 323 GKKACKYFEQGKGTCPFGSKCLYRH 347
>MKRN1_HUMAN (Q9UHC7) Makorin-1 (RING finger protein 61)|
Length = 482
Score = 41.6 bits (96), Expect = 0.001
Identities = 25/89 (28%), Positives = 35/89 (39%)
Frame = +2
Query: 92 GTEFGGGAKNAVALDYPERLGQPVCEYYMKTGTCKFGSNCKYHHPKQDGSVQPVMLNSNG 271
G GGG + + + Q C Y+M G CK G NC+Y H D
Sbjct: 40 GAGGGGGGSDGSGGGWTK---QVTCRYFMH-GVCKEGDNCRYSHDLSDS----------- 84
Query: 272 FPLRPGEKECSYYMKTGQCKFGSTCKFHH 358
P C Y+ + G C +G C++ H
Sbjct: 85 ----PYSVVCKYFQR-GYCIYGDRCRYEH 108
Score = 38.5 bits (88), Expect = 0.008
Identities = 21/71 (29%), Positives = 30/71 (42%)
Frame = +2
Query: 17 CIYYLRTGACGFGDRCRYNHPRDRGGTEFGGGAKNAVALDYPERLGQPVCEYYMKTGTCK 196
C Y++ G C GD CRY+H D + VC+Y+ + G C
Sbjct: 61 CRYFMH-GVCKEGDNCRYSH-------------------DLSDSPYSVVCKYFQR-GYCI 99
Query: 197 FGSNCKYHHPK 229
+G C+Y H K
Sbjct: 100 YGDRCRYEHSK 110
Score = 36.6 bits (83), Expect = 0.029
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +2
Query: 116 KNAVALDYPERLGQPVCEYYMK-TGTCKFGSNCKYHHPKQDG 238
K + L Y E + C Y+ + G+C FG NC Y H DG
Sbjct: 354 KQKLILKYKEAMSNKACRYFDEGRGSCPFGGNCFYKHAYPDG 395
>MKRN1_MOUSE (Q9QXP6) Makorin-1|
Length = 481
Score = 41.2 bits (95), Expect = 0.001
Identities = 25/89 (28%), Positives = 35/89 (39%)
Frame = +2
Query: 92 GTEFGGGAKNAVALDYPERLGQPVCEYYMKTGTCKFGSNCKYHHPKQDGSVQPVMLNSNG 271
G GGG + + + Q C Y+M G CK G NC+Y H D
Sbjct: 40 GAGGGGGGSDGSGGGWTK---QVTCRYFMH-GVCKEGDNCRYSHDLSDS----------- 84
Query: 272 FPLRPGEKECSYYMKTGQCKFGSTCKFHH 358
P C Y+ + G C +G C++ H
Sbjct: 85 ----PYGVVCKYFQR-GYCVYGDRCRYEH 108
Score = 39.7 bits (91), Expect = 0.003
Identities = 22/71 (30%), Positives = 32/71 (45%)
Frame = +2
Query: 17 CIYYLRTGACGFGDRCRYNHPRDRGGTEFGGGAKNAVALDYPERLGQPVCEYYMKTGTCK 196
C Y++ G C GD CRY+H D + +G VC+Y+ + G C
Sbjct: 61 CRYFMH-GVCKEGDNCRYSH--DLSDSPYG-----------------VVCKYFQR-GYCV 99
Query: 197 FGSNCKYHHPK 229
+G C+Y H K
Sbjct: 100 YGDRCRYEHSK 110
Score = 34.3 bits (77), Expect = 0.14
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = +2
Query: 116 KNAVALDYPERLGQPVCEYYMK-TGTCKFGSNCKYHHPKQDG 238
K + Y E + C Y+ + G+C FG NC Y H DG
Sbjct: 354 KQKLIQKYKEAMSNKACRYFDEGRGSCPFGGNCFYKHAYPDG 395
>MKRN4_HUMAN (Q13434) Makorin-4 (Zinc finger protein 127-Xp) (ZNF127-Xp) (RING|
finger protein 64)
Length = 485
Score = 40.0 bits (92), Expect = 0.003
Identities = 21/68 (30%), Positives = 29/68 (42%)
Frame = +2
Query: 26 YLRTGACGFGDRCRYNHPRDRGGTEFGGGAKNAVALDYPERLGQPVCEYYMKTGTCKFGS 205
Y + G C GD CRY+H D +RL VC+Y+ + G C +G
Sbjct: 98 YFKYGICKEGDNCRYSH-------------------DLSDRLCGVVCKYFQR-GCCVYGD 137
Query: 206 NCKYHHPK 229
C+ H K
Sbjct: 138 RCRCEHSK 145
Score = 40.0 bits (92), Expect = 0.003
Identities = 29/107 (27%), Positives = 44/107 (41%)
Frame = +2
Query: 38 GACGFGDRCRYNHPRDRGGTEFGGGAKNAVALDYPERLGQPVCEYYMKTGTCKFGSNCKY 217
G+ G GD Y+ GG++ G+ ++ + + Q C Y+ K G CK G NC+Y
Sbjct: 57 GSGGRGDSGAYDGSGACGGSDACDGSGDSSGDSWTK---QVTCRYF-KYGICKEGDNCRY 112
Query: 218 HHPKQDGSVQPVMLNSNGFPLRPGEKECSYYMKTGQCKFGSTCKFHH 358
H D V C Y+ + G C +G C+ H
Sbjct: 113 SHDLSDRLCGVV---------------CKYFQR-GCCVYGDRCRCEH 143
Score = 34.7 bits (78), Expect = 0.11
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Frame = +2
Query: 116 KNAVALDYPERLGQPVCEYYMK-TGTCKFGSNCKYHHPKQDGSVQPVMLNSNGFPLR-PG 289
K + Y E + C+Y+ + G+C FG NC Y H DG + G R PG
Sbjct: 389 KQKLIQKYKEAMSNKACKYFDEGRGSCPFGENCFYKHMYPDGRREEPQRQQVGTSSRNPG 448
Query: 290 EKECSYY 310
++ ++
Sbjct: 449 QQRNHFW 455
>MKRN1_MACEU (Q9TT91) Makorin-1|
Length = 478
Score = 39.7 bits (91), Expect = 0.003
Identities = 21/68 (30%), Positives = 28/68 (41%)
Frame = +2
Query: 155 QPVCEYYMKTGTCKFGSNCKYHHPKQDGSVQPVMLNSNGFPLRPGEKECSYYMKTGQCKF 334
Q C Y+M G CK G+NC+Y H V C YY + G C +
Sbjct: 54 QVTCRYFMH-GVCKKGNNCRYSHDLSTSQSAMV---------------CRYYQR-GCCAY 96
Query: 335 GSTCKFHH 358
G C++ H
Sbjct: 97 GDRCRYEH 104
Score = 38.9 bits (89), Expect = 0.006
Identities = 21/71 (29%), Positives = 28/71 (39%)
Frame = +2
Query: 17 CIYYLRTGACGFGDRCRYNHPRDRGGTEFGGGAKNAVALDYPERLGQPVCEYYMKTGTCK 196
C Y++ G C G+ CRY+H D VC YY + G C
Sbjct: 57 CRYFMH-GVCKKGNNCRYSH-------------------DLSTSQSAMVCRYYQR-GCCA 95
Query: 197 FGSNCKYHHPK 229
+G C+Y H K
Sbjct: 96 YGDRCRYEHTK 106
Score = 33.5 bits (75), Expect = 0.25
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = +2
Query: 116 KNAVALDYPERLGQPVCEYYMK-TGTCKFGSNCKYHHPKQDG 238
K + Y E + C Y+ + G+C FG NC Y H DG
Sbjct: 350 KQKLIQKYKEAMSNKPCRYFDEGRGSCPFGGNCFYKHAYPDG 391
>TTP_MOUSE (P22893) Tristetraproline (TTP) (Zinc finger protein 36) (Zfp-36)|
(TIS11A protein) (TIS11) (Growth factor-inducible
nuclear protein NUP475) (TPA-induced sequence 11)
Length = 319
Score = 39.3 bits (90), Expect = 0.004
Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Frame = +2
Query: 161 VCEYYMKTGTCKFGSNCKYHHPKQDGSVQPVMLNSNGFPLRPGEKECSYYMKTGQCKFGS 340
+C Y ++G C++G+ C++ H + + +N P E +Y++ G+C +GS
Sbjct: 100 LCRTYSESGRCRYGAKCQFAHGLGE------LRQANRHPKYKTELCHKFYLQ-GRCPYGS 152
Query: 341 TCKF-HHP-EFGGVPVTPGI------YPPLQSSTVSSPHP 436
C F H+P E +P P + + L S SSP P
Sbjct: 153 RCHFIHNPTEDLALPGQPHVLRQSISFSGLPSGRRSSPPP 192
Score = 35.8 bits (81), Expect = 0.049
Identities = 35/148 (23%), Positives = 60/148 (40%), Gaps = 8/148 (5%)
Frame = +2
Query: 17 CIYYLRTGACGFGDRCRYNHPRDRGGTEFGGGAKNAVALDYPERLGQPVCEYYMKTGTCK 196
C Y +G C +G +C++ H G + A +P + +C + G C
Sbjct: 101 CRTYSESGRCRYGAKCQFAH----------GLGELRQANRHP-KYKTELCHKFYLQGRCP 149
Query: 197 FGSNCKY-HHPKQDGSV--QP-VMLNSNGFPLRPGEKECSYYMKTGQCKFGSTCKF---- 352
+GS C + H+P +D ++ QP V+ S F P + S S+C F
Sbjct: 150 YGSRCHFIHNPTEDLALPGQPHVLRQSISFSGLPSGRRSSPPPPGFSGPSLSSCSFSPSS 209
Query: 353 HHPEFGGVPVTPGIYPPLQSSTVSSPHP 436
P G +P++P + + V+ P
Sbjct: 210 SPPPPGDLPLSPSAFSAAPGTPVTRRDP 237
>MKRN2_HUMAN (Q9H000) Makorin-2 (RING finger protein 62)|
Length = 416
Score = 39.3 bits (90), Expect = 0.004
Identities = 25/96 (26%), Positives = 36/96 (37%), Gaps = 2/96 (2%)
Frame = +2
Query: 155 QPVCEYYMKTGTCKFGSNCKYHHPKQDGSVQPVMLNSNGFPLRPGEKECSYYMKTGQCKF 334
Q C Y+M G C+ GS C + H + + C YY K G C +
Sbjct: 5 QITCRYFMH-GVCREGSQCLFSHDLANSKPSTI---------------CKYYQK-GYCAY 47
Query: 335 GSTCKFHH--PEFGGVPVTPGIYPPLQSSTVSSPHP 436
G+ C++ H P + + S SPHP
Sbjct: 48 GTRCRYDHTRPSAAAGGAVGTMAHSVPSPAFHSPHP 83
Score = 37.7 bits (86), Expect = 0.013
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +2
Query: 116 KNAVALDYPERLGQPVCEYYMK-TGTCKFGSNCKYHHPKQDG 238
KN + + + +G+ C+Y+ + GTC FGS C Y H DG
Sbjct: 311 KNELIEAFKQGMGKKACKYFEQGKGTCPFGSKCLYRHAYPDG 352
Score = 34.7 bits (78), Expect = 0.11
Identities = 36/162 (22%), Positives = 55/162 (33%), Gaps = 43/162 (26%)
Frame = +2
Query: 8 PADCIYYLRTGACGFGDRCRYNHPRDRGGTEFGGGAKNAVALDYPE------RLGQPVCE 169
P+ Y + G C +G RCRY+H R GGA +A P V
Sbjct: 33 PSTICKYYQKGYCAYGTRCRYDHTRPSAA---AGGAVGTMAHSVPSPAFHSPHPPSEVTA 89
Query: 170 YYMKTGTCKFGSNCKYHHPKQDGSV--------QPVMLNSNGFPLRP------------- 286
+KT + + G K +D ++ QP M+++ G P
Sbjct: 90 SIVKTNSHEPGKREKRTLVLRDRNLSGMAERKTQPSMVSNPGSCSDPQPSPEMKPHSYLD 149
Query: 287 ----------------GEKECSYYMKTGQCKFGSTCKFHHPE 364
E++ Y G+C+FG C + H E
Sbjct: 150 AIRSGLDDVEASSSYSNEQQLCPYAAAGECRFGDACVYLHGE 191
Score = 34.7 bits (78), Expect = 0.11
Identities = 18/71 (25%), Positives = 29/71 (40%)
Frame = +2
Query: 17 CIYYLRTGACGFGDRCRYNHPRDRGGTEFGGGAKNAVALDYPERLGQPVCEYYMKTGTCK 196
C Y++ G C G +C ++H D +C+YY K G C
Sbjct: 8 CRYFMH-GVCREGSQCLFSH-------------------DLANSKPSTICKYYQK-GYCA 46
Query: 197 FGSNCKYHHPK 229
+G+ C+Y H +
Sbjct: 47 YGTRCRYDHTR 57
Score = 28.5 bits (62), Expect = 7.9
Identities = 11/25 (44%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = +2
Query: 287 GEKECSYYMK-TGQCKFGSTCKFHH 358
G+K C Y+ + G C FGS C + H
Sbjct: 323 GKKACKYFEQGKGTCPFGSKCLYRH 347
>MKRN2_BRARE (Q9DFG8) Makorin-2|
Length = 414
Score = 37.7 bits (86), Expect = 0.013
Identities = 21/74 (28%), Positives = 29/74 (39%)
Frame = +2
Query: 17 CIYYLRTGACGFGDRCRYNHPRDRGGTEFGGGAKNAVALDYPERLGQPVCEYYMKTGTCK 196
C Y+L G C G RC ++H D +C+YY + G C
Sbjct: 8 CRYFLH-GVCREGSRCLFSH-------------------DLTTSKPSTICKYYQR-GACA 46
Query: 197 FGSNCKYHHPKQDG 238
+G C+Y H K G
Sbjct: 47 YGDRCRYDHIKPPG 60
Score = 33.9 bits (76), Expect = 0.19
Identities = 17/68 (25%), Positives = 26/68 (38%)
Frame = +2
Query: 155 QPVCEYYMKTGTCKFGSNCKYHHPKQDGSVQPVMLNSNGFPLRPGEKECSYYMKTGQCKF 334
Q C Y++ G C+ GS C + H + C YY + G C +
Sbjct: 5 QVTCRYFLH-GVCREGSRCLFSHDLTTSKPSTI---------------CKYYQR-GACAY 47
Query: 335 GSTCKFHH 358
G C++ H
Sbjct: 48 GDRCRYDH 55
Score = 32.7 bits (73), Expect = 0.42
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +2
Query: 116 KNAVALDYPERLGQPVCEYYMK-TGTCKFGSNCKYHHPKQDG 238
KN + ++ + + C+Y+ + GTC FG C Y H DG
Sbjct: 310 KNLLIEEFKSGVSKKACKYFDQGRGTCPFGGKCFYMHAYADG 351
>CWC24_ASHGO (Q752S4) Pre-mRNA-splicing factor CWC24|
Length = 250
Score = 37.7 bits (86), Expect = 0.013
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +2
Query: 95 TEFGGGAKNAVALDYPERLGQP-VCEYYMKTGTCKFGSNCKYHHPKQD 235
T G + V +DY QP VC+ Y +TG C +G +CK+ H + D
Sbjct: 88 TAVGSNVRTRVVMDY-----QPDVCKDYRQTGFCGYGDSCKFLHSRDD 130
Score = 34.7 bits (78), Expect = 0.11
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +2
Query: 8 PADCIYYLRTGACGFGDRCRYNHPRD 85
P C Y +TG CG+GD C++ H RD
Sbjct: 104 PDVCKDYRQTGFCGYGDSCKFLHSRD 129
Score = 28.9 bits (63), Expect = 6.0
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +2
Query: 299 CSYYMKTGQCKFGSTCKFHH 358
C Y +TG C +G +CKF H
Sbjct: 107 CKDYRQTGFCGYGDSCKFLH 126
>MKRN2_SERQU (Q9DD48) Makorin-2 (Zinc finger protein YGHLC3HC4)|
Length = 423
Score = 37.7 bits (86), Expect = 0.013
Identities = 19/35 (54%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Frame = +2
Query: 17 CIYYLRTGACGFGDRCRYNH--PRDRGGTEFGGGA 115
C +Y R G C +G+RCRY+H P RGG GGGA
Sbjct: 37 CKFYQR-GVCAYGERCRYDHIKPSSRGG---GGGA 67
Score = 34.7 bits (78), Expect = 0.11
Identities = 19/71 (26%), Positives = 28/71 (39%)
Frame = +2
Query: 17 CIYYLRTGACGFGDRCRYNHPRDRGGTEFGGGAKNAVALDYPERLGQPVCEYYMKTGTCK 196
C Y+L G C G RC ++H D +C++Y + G C
Sbjct: 8 CRYFLH-GVCREGSRCLFSH-------------------DLNNSKPSTICKFYQR-GVCA 46
Query: 197 FGSNCKYHHPK 229
+G C+Y H K
Sbjct: 47 YGERCRYDHIK 57
Score = 33.1 bits (74), Expect = 0.32
Identities = 16/68 (23%), Positives = 27/68 (39%)
Frame = +2
Query: 155 QPVCEYYMKTGTCKFGSNCKYHHPKQDGSVQPVMLNSNGFPLRPGEKECSYYMKTGQCKF 334
Q C Y++ G C+ GS C + H + + C +Y + G C +
Sbjct: 5 QVTCRYFLH-GVCREGSRCLFSHDLNNSKPSTI---------------CKFYQR-GVCAY 47
Query: 335 GSTCKFHH 358
G C++ H
Sbjct: 48 GERCRYDH 55
>CWC24_NEUCR (Q7SDY3) Pre-mRNA-splicing factor cwc-24|
Length = 405
Score = 36.6 bits (83), Expect = 0.029
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +2
Query: 161 VCEYYMKTGTCKFGSNCKYHHPKQD 235
VC+ Y +TG C FG NCK+ H ++D
Sbjct: 226 VCKDYKQTGFCGFGDNCKFLHARED 250
Score = 34.7 bits (78), Expect = 0.11
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +2
Query: 8 PADCIYYLRTGACGFGDRCRYNHPRD 85
P C Y +TG CGFGD C++ H R+
Sbjct: 224 PDVCKDYKQTGFCGFGDNCKFLHARE 249
Score = 29.6 bits (65), Expect = 3.5
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2
Query: 299 CSYYMKTGQCKFGSTCKFHH 358
C Y +TG C FG CKF H
Sbjct: 227 CKDYKQTGFCGFGDNCKFLH 246
>R113A_HUMAN (O15541) RING finger protein 113A (Zinc finger protein 183)|
Length = 343
Score = 36.2 bits (82), Expect = 0.038
Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 8/71 (11%)
Frame = +2
Query: 47 GFGDRCRYNHPRDRGGTEFGGGAKNAVALDYPERLG-------QP-VCEYYMKTGTCKFG 202
G + +Y P+D G + PE L QP +C+ Y +TG C FG
Sbjct: 155 GINNYQKYMKPKDTSMGNASSGMVRKGPIRAPEHLRATVRWDYQPDICKDYKETGFCGFG 214
Query: 203 SNCKYHHPKQD 235
+CK+ H + D
Sbjct: 215 DSCKFLHDRSD 225
Score = 33.1 bits (74), Expect = 0.32
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +2
Query: 8 PADCIYYLRTGACGFGDRCRYNHPR 82
P C Y TG CGFGD C++ H R
Sbjct: 199 PDICKDYKETGFCGFGDSCKFLHDR 223
Score = 30.0 bits (66), Expect = 2.7
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +2
Query: 299 CSYYMKTGQCKFGSTCKFHH 358
C Y +TG C FG +CKF H
Sbjct: 202 CKDYKETGFCGFGDSCKFLH 221
>U2AFM_HUMAN (Q15696) U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa|
subunit related-protein 2 (U2(RNU2) small nuclear RNA
auxillary factor 1-like 2) (NY-REN-20 antigen)
Length = 482
Score = 35.4 bits (80), Expect = 0.065
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +2
Query: 11 ADCIYYLRTGACGFGDRCRYNH 76
A+C +Y +TGAC FGDRC H
Sbjct: 170 ANCPFYSKTGACRFGDRCSRKH 191
Score = 31.6 bits (70), Expect = 0.93
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +2
Query: 164 CEYYMKTGTCKFGSNCKYHH 223
C +Y KTG C+FG C H
Sbjct: 172 CPFYSKTGACRFGDRCSRKH 191
Score = 30.4 bits (67), Expect = 2.1
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +2
Query: 299 CSYYMKTGQCKFGSTCKFHH 358
C +Y KTG C+FG C H
Sbjct: 172 CPFYSKTGACRFGDRCSRKH 191
>U2AFL_HUMAN (Q15695) U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa|
subunit-related protein 1 (U2(RNU2) small nuclear RNA
auxillary factor 1-like 1)
Length = 479
Score = 35.4 bits (80), Expect = 0.065
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +2
Query: 11 ADCIYYLRTGACGFGDRCRYNH 76
A+C +Y +TGAC FGDRC H
Sbjct: 175 ANCPFYSKTGACRFGDRCSRKH 196
Score = 31.6 bits (70), Expect = 0.93
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +2
Query: 164 CEYYMKTGTCKFGSNCKYHH 223
C +Y KTG C+FG C H
Sbjct: 177 CPFYSKTGACRFGDRCSRKH 196
Score = 30.4 bits (67), Expect = 2.1
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +2
Query: 299 CSYYMKTGQCKFGSTCKFHH 358
C +Y KTG C+FG C H
Sbjct: 177 CPFYSKTGACRFGDRCSRKH 196
>U2AFM_MOUSE (Q62377) U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa|
subunit related-protein 2 (U2(RNU2) small nuclear RNA
auxillary factor 1-like 2)
Length = 462
Score = 35.4 bits (80), Expect = 0.065
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +2
Query: 11 ADCIYYLRTGACGFGDRCRYNH 76
A+C +Y +TGAC FGDRC H
Sbjct: 174 ANCPFYSKTGACRFGDRCSRKH 195
Score = 31.6 bits (70), Expect = 0.93
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +2
Query: 164 CEYYMKTGTCKFGSNCKYHH 223
C +Y KTG C+FG C H
Sbjct: 176 CPFYSKTGACRFGDRCSRKH 195
Score = 30.8 bits (68), Expect = 1.6
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = +2
Query: 278 LRPGEKECSYYMKTGQCKFGSTCKFHH 358
L C +Y KTG C+FG C H
Sbjct: 169 LEKDRANCPFYSKTGACRFGDRCSRKH 195
>MKRN3_MOUSE (Q60764) Makorin-3 (Zinc finger protein 127)|
Length = 544
Score = 35.0 bits (79), Expect = 0.084
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +2
Query: 104 GGGAKNAVALDYPERLGQPVCEYYMKTGTCKFGSNCKYHH 223
GGGA++ + Q +C YY+ G CK G NC+Y H
Sbjct: 78 GGGARSGPERNSGSWTKQILCRYYLH-GQCKEGDNCRYSH 116
Score = 31.2 bits (69), Expect = 1.2
Identities = 16/33 (48%), Positives = 18/33 (54%), Gaps = 5/33 (15%)
Frame = +2
Query: 17 CIYYLRTGACGFGDRCRYNHP-----RDRGGTE 100
C YYL G C GD CRY+H R RGG +
Sbjct: 98 CRYYLH-GQCKEGDNCRYSHDLSGRRRSRGGQD 129
Score = 30.0 bits (66), Expect = 2.7
Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Frame = +2
Query: 116 KNAVALDYPERLGQPVCEYYMK-TGTCKFGSNCKYHHPKQDG 238
K + Y E + Q C Y+ G C FG C Y H +G
Sbjct: 420 KEKLVQQYKEGMSQKACRYFAGGLGHCPFGEFCFYKHEYPEG 461
>R113B_HUMAN (Q8IZP6) RING finger protein 113B (Zinc finger protein 183-like 1)|
Length = 322
Score = 34.7 bits (78), Expect = 0.11
Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 13/76 (17%)
Frame = +2
Query: 47 GFGDRCRYNHPRD------------RGGTEFGGGAKNAVALDYPERLGQP-VCEYYMKTG 187
G RY P+D +G G + V DY QP +C+ Y +TG
Sbjct: 149 GIHSYLRYLKPKDTSMGNSSSGMARKGPIRAPGHLRATVRWDY-----QPDICKDYKETG 203
Query: 188 TCKFGSNCKYHHPKQD 235
C FG +CK+ H + D
Sbjct: 204 FCGFGDSCKFLHDRSD 219
Score = 33.1 bits (74), Expect = 0.32
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +2
Query: 8 PADCIYYLRTGACGFGDRCRYNHPR 82
P C Y TG CGFGD C++ H R
Sbjct: 193 PDICKDYKETGFCGFGDSCKFLHDR 217
Score = 30.0 bits (66), Expect = 2.7
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +2
Query: 299 CSYYMKTGQCKFGSTCKFHH 358
C Y +TG C FG +CKF H
Sbjct: 196 CKDYKETGFCGFGDSCKFLH 215
>CWC24_YEAST (P53769) Pre-mRNA-splicing factor CWC24 (Complexed with CEF1|
protein 24)
Length = 259
Score = 34.7 bits (78), Expect = 0.11
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +2
Query: 8 PADCIYYLRTGACGFGDRCRYNHPRD 85
P C Y +TG CG+GD C++ H RD
Sbjct: 141 PDVCKDYKQTGYCGYGDSCKFLHSRD 166
Score = 32.7 bits (73), Expect = 0.42
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +2
Query: 161 VCEYYMKTGTCKFGSNCKYHHPKQD 235
VC+ Y +TG C +G +CK+ H + D
Sbjct: 143 VCKDYKQTGYCGYGDSCKFLHSRDD 167
Score = 29.6 bits (65), Expect = 3.5
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +2
Query: 299 CSYYMKTGQCKFGSTCKFHH 358
C Y +TG C +G +CKF H
Sbjct: 144 CKDYKQTGYCGYGDSCKFLH 163
>ZN183_BOVIN (Q67ER4) Zinc finger protein 183|
Length = 343
Score = 34.7 bits (78), Expect = 0.11
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 8/71 (11%)
Frame = +2
Query: 47 GFGDRCRYNHPRDRGGTEFGGGAKNAVALDYPERLG-------QP-VCEYYMKTGTCKFG 202
G + ++ P+D G + PE L QP +C+ Y +TG C FG
Sbjct: 155 GINNYQKFMKPKDTSMGNASSGMVRKGPIRAPEHLRATVRWDYQPDICKDYKETGFCGFG 214
Query: 203 SNCKYHHPKQD 235
+CK+ H + D
Sbjct: 215 DSCKFLHDRSD 225
Score = 33.1 bits (74), Expect = 0.32
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +2
Query: 8 PADCIYYLRTGACGFGDRCRYNHPR 82
P C Y TG CGFGD C++ H R
Sbjct: 199 PDICKDYKETGFCGFGDSCKFLHDR 223
Score = 30.0 bits (66), Expect = 2.7
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +2
Query: 299 CSYYMKTGQCKFGSTCKFHH 358
C Y +TG C FG +CKF H
Sbjct: 202 CKDYKETGFCGFGDSCKFLH 221
>CWC24_DEBHA (Q6BYU0) Pre-mRNA-splicing factor CWC24|
Length = 232
Score = 34.7 bits (78), Expect = 0.11
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +2
Query: 8 PADCIYYLRTGACGFGDRCRYNHPRD 85
P C +L+TG CG+GD C++ H RD
Sbjct: 115 PDVCKDFLQTGYCGYGDTCKFLHIRD 140
Score = 30.8 bits (68), Expect = 1.6
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +2
Query: 299 CSYYMKTGQCKFGSTCKFHH 358
C +++TG C +G TCKF H
Sbjct: 118 CKDFLQTGYCGYGDTCKFLH 137
Score = 29.6 bits (65), Expect = 3.5
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = +2
Query: 161 VCEYYMKTGTCKFGSNCKYHHPKQD 235
VC+ +++TG C +G CK+ H + +
Sbjct: 117 VCKDFLQTGYCGYGDTCKFLHIRDE 141
>CWC24_EMENI (Q5AVC5) Pre-mRNA-splicing factor cwc24|
Length = 332
Score = 34.3 bits (77), Expect = 0.14
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +2
Query: 8 PADCIYYLRTGACGFGDRCRYNHPRD 85
P C Y TG CGFGD C+++H R+
Sbjct: 165 PDVCKDYKLTGYCGFGDSCKFSHMRE 190
Score = 33.9 bits (76), Expect = 0.19
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +2
Query: 161 VCEYYMKTGTCKFGSNCKYHHPKQD 235
VC+ Y TG C FG +CK+ H ++D
Sbjct: 167 VCKDYKLTGYCGFGDSCKFSHMRED 191
Score = 30.4 bits (67), Expect = 2.1
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2
Query: 299 CSYYMKTGQCKFGSTCKFHH 358
C Y TG C FG +CKF H
Sbjct: 168 CKDYKLTGYCGFGDSCKFSH 187
>CWC24_USTMA (Q4P400) Pre-mRNA-splicing factor CWC24|
Length = 355
Score = 34.3 bits (77), Expect = 0.14
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +2
Query: 80 RDRGGTEFGGGAKNAVALDYPERLGQP-VCEYYMKTGTCKFGSNCKYHHPKQD 235
R RG + +DY QP VC+ Y +TG C FG CK+ H + D
Sbjct: 179 RSRGPIRQTTTVRTTSLIDY-----QPDVCKDYKETGYCGFGDTCKFLHDRSD 226
Score = 33.1 bits (74), Expect = 0.32
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +2
Query: 8 PADCIYYLRTGACGFGDRCRYNHPR 82
P C Y TG CGFGD C++ H R
Sbjct: 200 PDVCKDYKETGYCGFGDTCKFLHDR 224
Score = 32.3 bits (72), Expect = 0.55
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +2
Query: 299 CSYYMKTGQCKFGSTCKFHH 358
C Y +TG C FG TCKF H
Sbjct: 203 CKDYKETGYCGFGDTCKFLH 222
>U2AFL_MOUSE (Q64707) U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa|
subunit-related protein 1 (U2(RNU2) small nuclear RNA
auxillary factor 1-like 1) (SP2)
Length = 428
Score = 33.9 bits (76), Expect = 0.19
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +2
Query: 155 QPVCEYYMKTGTCKFGSNCKYHH 223
+P C +Y KTG C+FG+ C H
Sbjct: 160 RPSCPFYNKTGACRFGNRCSRKH 182
Score = 31.2 bits (69), Expect = 1.2
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +2
Query: 17 CIYYLRTGACGFGDRCRYNH 76
C +Y +TGAC FG+RC H
Sbjct: 163 CPFYNKTGACRFGNRCSRKH 182
Score = 30.4 bits (67), Expect = 2.1
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +2
Query: 299 CSYYMKTGQCKFGSTCKFHH 358
C +Y KTG C+FG+ C H
Sbjct: 163 CPFYNKTGACRFGNRCSRKH 182
>DHX57_MOUSE (Q6P5D3) Putative ATP-dependent RNA helicase DHX57 (EC 3.6.1.-)|
(DEAH box protein 57)
Length = 1388
Score = 33.9 bits (76), Expect = 0.19
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +2
Query: 299 CSYYMKTGQCKFGSTCKFHH 358
C +Y+K G CKFGS CKF H
Sbjct: 305 CKFYLK-GNCKFGSKCKFKH 323
Score = 33.5 bits (75), Expect = 0.25
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +2
Query: 164 CEYYMKTGTCKFGSNCKYHH 223
C++Y+K G CKFGS CK+ H
Sbjct: 305 CKFYLK-GNCKFGSKCKFKH 323
Score = 28.5 bits (62), Expect = 7.9
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +2
Query: 8 PADCIYYLRTGACGFGDRCRYNH 76
P C +YL+ G C FG +C++ H
Sbjct: 302 PETCKFYLK-GNCKFGSKCKFKH 323
>RN113_CAEEL (O17917) Putative RING finger protein 113 homolog|
Length = 384
Score = 33.9 bits (76), Expect = 0.19
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +2
Query: 161 VCEYYMKTGTCKFGSNCKYHHPKQD 235
+C+ Y +TG C FG +CK+ H + D
Sbjct: 180 ICKDYKETGFCTFGDSCKFVHDRSD 204
Score = 30.4 bits (67), Expect = 2.1
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +2
Query: 299 CSYYMKTGQCKFGSTCKFHH 358
C Y +TG C FG +CKF H
Sbjct: 181 CKDYKETGFCTFGDSCKFVH 200
Score = 30.0 bits (66), Expect = 2.7
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2
Query: 8 PADCIYYLRTGACGFGDRCRYNHPR 82
P C Y TG C FGD C++ H R
Sbjct: 178 PDICKDYKETGFCTFGDSCKFVHDR 202
>NUPL2_CHICK (Q5ZI22) Nucleoporin-like 2|
Length = 413
Score = 33.9 bits (76), Expect = 0.19
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +2
Query: 17 CIYYLRTGACGFGDRCRYNHPRDRGGTEFGGG 112
C ++L+ G C FGDRC HPR GG G
Sbjct: 4 CQFFLQ-GRCRFGDRCWNEHPRGGGGRPHSAG 34
Score = 28.9 bits (63), Expect = 6.0
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = +2
Query: 161 VCEYYMKTGTCKFGSNCKYHHPKQDG 238
+C+++++ G C+FG C HP+ G
Sbjct: 3 ICQFFLQ-GRCRFGDRCWNEHPRGGG 27
Score = 28.5 bits (62), Expect = 7.9
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +2
Query: 299 CSYYMKTGQCKFGSTCKFHHPEFGG 373
C ++++ G+C+FG C HP GG
Sbjct: 4 CQFFLQ-GRCRFGDRCWNEHPRGGG 27
>K0853_HUMAN (Q5T200) Protein KIAA0853|
Length = 1668
Score = 33.9 bits (76), Expect = 0.19
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +2
Query: 290 EKECSYYMKTGQCKFGSTCKFHH 358
E +C ++KTG C +G+TC+F H
Sbjct: 39 ETQCRNWLKTGNCLYGNTCRFVH 61
Score = 29.3 bits (64), Expect = 4.6
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 7/34 (20%)
Frame = +2
Query: 143 ERLG-------QPVCEYYMKTGTCKFGSNCKYHH 223
ERLG + C ++KTG C +G+ C++ H
Sbjct: 28 ERLGPSTGSTAETQCRNWLKTGNCLYGNTCRFVH 61
Score = 28.5 bits (62), Expect = 7.9
Identities = 12/28 (42%), Positives = 18/28 (64%), Gaps = 3/28 (10%)
Frame = +2
Query: 17 CIYYLRTGACGFGDRCRYNH---PRDRG 91
C +L+TG C +G+ CR+ H PR +G
Sbjct: 42 CRNWLKTGNCLYGNTCRFVHGPSPRGKG 69
>CWC24_KLULA (Q6CSS6) Pre-mRNA-splicing factor CWC24|
Length = 229
Score = 33.5 bits (75), Expect = 0.25
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 8 PADCIYYLRTGACGFGDRCRYNHPRD 85
P C + +TG CG+GD C++ H RD
Sbjct: 113 PDICKDFQKTGYCGYGDSCKFLHSRD 138
Score = 33.5 bits (75), Expect = 0.25
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +2
Query: 227 KQDGSVQPVMLNSNGFPLRPGEKE-CSYYMKTGQCKFGSTCKFHH 358
K G V+PV N + + + C + KTG C +G +CKF H
Sbjct: 91 KVSGFVKPVSKNMKTVTITDYQPDICKDFQKTGYCGYGDSCKFLH 135
Score = 32.7 bits (73), Expect = 0.42
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +2
Query: 161 VCEYYMKTGTCKFGSNCKYHHPKQD 235
+C+ + KTG C +G +CK+ H + D
Sbjct: 115 ICKDFQKTGYCGYGDSCKFLHSRDD 139
>MKRN3_HUMAN (Q13064) Makorin-3 (Zinc finger protein 127) (RING finger protein|
63)
Length = 507
Score = 33.1 bits (74), Expect = 0.32
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 6/47 (12%)
Frame = +2
Query: 155 QPVCEYYMKTGTCKFGSNCKYHHP------KQDGSVQPVMLNSNGFP 277
Q +C YY+ G CK G NC+Y H +G V P ++ G P
Sbjct: 98 QIICRYYIH-GQCKEGENCRYSHDLSGRKMATEGGVSPPGASAGGGP 143
Score = 33.1 bits (74), Expect = 0.32
Identities = 21/69 (30%), Positives = 27/69 (39%)
Frame = +2
Query: 224 PKQDGSVQPVMLNSNGFPLRPGEKECSYYMKTGQCKFGSTCKFHHPEFGGVPVTPGIYPP 403
P G P L S + + C YY+ GQCK G C++ H G T G P
Sbjct: 76 PASGGGAWPSPLPSRSSGIWTKQIICRYYIH-GQCKEGENCRYSHDLSGRKMATEGGVSP 134
Query: 404 LQSSTVSSP 430
+S P
Sbjct: 135 PGASAGGGP 143
Score = 31.2 bits (69), Expect = 1.2
Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Frame = +2
Query: 116 KNAVALDYPERLGQPVCEYYMK-TGTCKFGSNCKYHHPKQDG 238
K + Y E + C Y+ + G C FG C Y H +G
Sbjct: 384 KQKLIQQYKEAMSNKACRYFAEGRGNCPFGDTCFYKHEYPEG 425
Score = 28.9 bits (63), Expect = 6.0
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
Frame = +2
Query: 293 KECSYYMK-TGQCKFGSTCKFHH--PE-FGGVPVTPG 391
K C Y+ + G C FG TC + H PE +G P PG
Sbjct: 398 KACRYFAEGRGNCPFGDTCFYKHEYPEGWGDEPPGPG 434
>CWC24_CRYNE (Q5KB05) Pre-mRNA-splicing factor CWC24|
Length = 329
Score = 32.0 bits (71), Expect = 0.71
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +2
Query: 161 VCEYYMKTGTCKFGSNCKYHHPKQD 235
VC+ Y +TG C +G +CK+ H + D
Sbjct: 182 VCKDYKETGFCGYGDSCKFLHDRGD 206
Score = 32.0 bits (71), Expect = 0.71
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 8 PADCIYYLRTGACGFGDRCRYNHPR 82
P C Y TG CG+GD C++ H R
Sbjct: 180 PDVCKDYKETGFCGYGDSCKFLHDR 204
Score = 28.9 bits (63), Expect = 6.0
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +2
Query: 299 CSYYMKTGQCKFGSTCKFHH 358
C Y +TG C +G +CKF H
Sbjct: 183 CKDYKETGFCGYGDSCKFLH 202
>MEX6_CAEEL (Q09436) Zinc finger protein mex-6|
Length = 467
Score = 31.6 bits (70), Expect = 0.93
Identities = 27/102 (26%), Positives = 41/102 (40%), Gaps = 11/102 (10%)
Frame = +2
Query: 107 GGAKNAVALDYPERLGQPVCEYYMK-TGTCKFGSNCKYHHPKQDGSVQPVMLNSNGFPLR 283
G AK V P +C + C G+ CK+ H ++ L ++ P R
Sbjct: 260 GFAKPEVDSQLPHNFKTRLCMTHAAGINPCALGARCKFAHGLKE-------LRASDIPTR 312
Query: 284 -PGEKE----CSYYMK--TGQCKFGSTCKFHHP---EFGGVP 379
P K C + + +G C +G C+F HP EF +P
Sbjct: 313 YPNNKYKTKLCKNFARGGSGVCPYGLRCEFVHPSDTEFQNIP 354
Score = 30.4 bits (67), Expect = 2.1
Identities = 18/68 (26%), Positives = 28/68 (41%), Gaps = 7/68 (10%)
Frame = +2
Query: 44 CGFGDRCRYNHPRDRGGTEFGGGAKNAVALDYPERLGQ-----PVCEYYMK--TGTCKFG 202
C G RC++ H G K A D P R +C+ + + +G C +G
Sbjct: 289 CALGARCKFAH-----------GLKELRASDIPTRYPNNKYKTKLCKNFARGGSGVCPYG 337
Query: 203 SNCKYHHP 226
C++ HP
Sbjct: 338 LRCEFVHP 345
>MEX5_CAEEL (Q9XUB2) Zinc finger protein mex-5|
Length = 468
Score = 31.6 bits (70), Expect = 0.93
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
Frame = +2
Query: 191 CKFGSNCKYHHPKQD--GSVQPVMLNSNGFPLRPGEKECSYYMK--TGQCKFGSTCKFHH 358
C G+ CK+ H ++ + P +N + K C + + TG C +G C+F H
Sbjct: 286 CDMGARCKFAHGLKELRATDAPARYPNNKYKT----KLCKNFARGGTGFCPYGLRCEFVH 341
Query: 359 P---EFGGVP 379
P EF +P
Sbjct: 342 PTDKEFQNIP 351
Score = 30.8 bits (68), Expect = 1.6
Identities = 19/68 (27%), Positives = 28/68 (41%), Gaps = 7/68 (10%)
Frame = +2
Query: 44 CGFGDRCRYNHPRDRGGTEFGGGAKNAVALDYPERLGQ-----PVCEYYMKTGT--CKFG 202
C G RC++ H G K A D P R +C+ + + GT C +G
Sbjct: 286 CDMGARCKFAH-----------GLKELRATDAPARYPNNKYKTKLCKNFARGGTGFCPYG 334
Query: 203 SNCKYHHP 226
C++ HP
Sbjct: 335 LRCEFVHP 342
>CWC24_SCHPO (Q9P6R8) Pre-mRNA-splicing factor cwc24 (Complexed with cdc5|
protein 24) (Cell cycle control protein cwf24)
Length = 533
Score = 31.6 bits (70), Expect = 0.93
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +2
Query: 161 VCEYYMKTGTCKFGSNCKYHHPKQD 235
VC+ Y TG C +G CK+ H ++D
Sbjct: 189 VCKDYKLTGYCGYGDTCKFLHMRED 213
Score = 31.6 bits (70), Expect = 0.93
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +2
Query: 8 PADCIYYLRTGACGFGDRCRYNHPRD 85
P C Y TG CG+GD C++ H R+
Sbjct: 187 PDVCKDYKLTGYCGYGDTCKFLHMRE 212
Score = 30.0 bits (66), Expect = 2.7
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2
Query: 299 CSYYMKTGQCKFGSTCKFHH 358
C Y TG C +G TCKF H
Sbjct: 190 CKDYKLTGYCGYGDTCKFLH 209
>U2AF1_PIG (Q29350) Splicing factor U2AF 35 kDa subunit (U2 auxiliary factor|
35 kDa subunit) (U2 snRNP auxiliary factor small
subunit) (Fragment)
Length = 81
Score = 31.2 bits (69), Expect = 1.2
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +2
Query: 164 CEYYMKTGTCKFGSNCKYHHPKQDGSVQPVMLN 262
C +Y K G C+ G C H K S V+LN
Sbjct: 17 CSFYFKIGACRHGDRCSRLHNKPTFSQTIVLLN 49
Score = 28.9 bits (63), Expect = 6.0
Identities = 16/49 (32%), Positives = 20/49 (40%), Gaps = 4/49 (8%)
Frame = +2
Query: 299 CSYYMKTGQCKFGSTCKFHH--PEFGGVPVTPGIY--PPLQSSTVSSPH 433
CS+Y K G C+ G C H P F V +Y P + T H
Sbjct: 17 CSFYFKIGACRHGDRCSRLHNKPTFSQTIVLLNLYRNPQNTAQTADGSH 65
Score = 28.9 bits (63), Expect = 6.0
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2
Query: 14 DCIYYLRTGACGFGDRCRYNH 76
+C +Y + GAC GDRC H
Sbjct: 16 NCSFYFKIGACRHGDRCSRLH 36
>U2AF1_DROME (Q94535) Splicing factor U2af 38 kDa subunit (U2 auxiliary factor|
38 kDa subunit) (U2 snRNP auxiliary factor small
subunit)
Length = 264
Score = 30.4 bits (67), Expect = 2.1
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +2
Query: 299 CSYYMKTGQCKFGSTCKFHH--PEFGGVPVTPGIYPPLQSSTVSS 427
CS+Y K G C+ G C H P F + +Y Q+S S+
Sbjct: 18 CSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYVNPQNSAKSA 62
Score = 28.9 bits (63), Expect = 6.0
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2
Query: 14 DCIYYLRTGACGFGDRCRYNH 76
+C +Y + GAC GDRC H
Sbjct: 17 NCSFYFKIGACRHGDRCSRIH 37
Score = 28.5 bits (62), Expect = 7.9
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +2
Query: 164 CEYYMKTGTCKFGSNCKYHHPKQDGSVQPVMLNS 265
C +Y K G C+ G C H K S Q V+L +
Sbjct: 18 CSFYFKIGACRHGDRCSRIHNKPTFS-QTVLLQN 50
>U2AF1_HUMAN (Q01081) Splicing factor U2AF 35 kDa subunit (U2 auxiliary factor|
35 kDa subunit) (U2 snRNP auxiliary factor small
subunit)
Length = 239
Score = 30.0 bits (66), Expect = 2.7
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +2
Query: 299 CSYYMKTGQCKFGSTCKFHH--PEFGGVPVTPGIYPPLQSSTVSS 427
CS+Y K G C+ G C H P F IY Q+S+ S+
Sbjct: 17 CSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSA 61
Score = 29.6 bits (65), Expect = 3.5
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = +2
Query: 164 CEYYMKTGTCKFGSNCKYHHPKQDGSVQPVMLN 262
C +Y K G C+ G C H K S +LN
Sbjct: 17 CSFYFKIGACRHGDRCSRLHNKPTFSQTIALLN 49
Score = 28.9 bits (63), Expect = 6.0
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2
Query: 14 DCIYYLRTGACGFGDRCRYNH 76
+C +Y + GAC GDRC H
Sbjct: 16 NCSFYFKIGACRHGDRCSRLH 36
>U2AF1_MOUSE (Q9D883) Splicing factor U2AF 35 kDa subunit (U2 auxiliary factor|
35 kDa subunit) (U2 snRNP auxiliary factor small
subunit)
Length = 238
Score = 30.0 bits (66), Expect = 2.7
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +2
Query: 299 CSYYMKTGQCKFGSTCKFHH--PEFGGVPVTPGIYPPLQSSTVSS 427
CS+Y K G C+ G C H P F IY Q+S+ S+
Sbjct: 17 CSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSA 61
Score = 29.6 bits (65), Expect = 3.5
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = +2
Query: 164 CEYYMKTGTCKFGSNCKYHHPKQDGSVQPVMLN 262
C +Y K G C+ G C H K S +LN
Sbjct: 17 CSFYFKIGACRHGDRCSRLHNKPTFSQTIALLN 49
Score = 28.9 bits (63), Expect = 6.0
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2
Query: 14 DCIYYLRTGACGFGDRCRYNH 76
+C +Y + GAC GDRC H
Sbjct: 16 NCSFYFKIGACRHGDRCSRLH 36
>NFAC2_HUMAN (Q13469) Nuclear factor of activated T-cells, cytoplasmic 2 (T cell|
transcription factor NFAT1) (NFAT pre-existing subunit)
(NF-ATp)
Length = 925
Score = 28.5 bits (62), Expect = 7.9
Identities = 32/99 (32%), Positives = 40/99 (40%), Gaps = 1/99 (1%)
Frame = -1
Query: 336 PNLHCPVFM**EHSFSPGRRGNPLLFNITGCTEPSCLGW*YLQLEPNLQVPVFM*YSHTG 157
P+ CP F +SP R +P++ T E SCLG PV S +
Sbjct: 198 PDDLCPQFQNIPAHYSP--RTSPIMSPRTSLAEDSCLG---------RHSPVPRPASRSS 246
Query: 156 *PN-RSG*SNATAFFAPPPNSVPPRSRGWL*RQRSPKPQ 43
P + S A A A PP + P RS RSP PQ
Sbjct: 247 SPGAKRRHSCAEALVALPPGASPQRS-------RSPSPQ 278
Database: uniprot_sprot.fasta
Posted date: May 25, 2006 5:36 PM
Number of letters in database: 80,573,946
Number of sequences in database: 219,361
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,576,497
Number of Sequences: 219361
Number of extensions: 1400446
Number of successful extensions: 4497
Number of sequences better than 10.0: 117
Number of HSP's better than 10.0 without gapping: 3713
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4268
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2677159704
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)