>TAR1_KLULA (Q6CQE5) Protein TAR1|
          Length = 109

 Score = 40.8 bits (94), Expect = 0.001
 Identities = 19/33 (57%), Positives = 24/33 (72%)
 Frame = -3

Query: 156 FTFYFTTHWGFFSPFPHGTTSLSVTQEYLALQG 58
           FT++FT    FFS F H T SLSV+++YLAL G
Sbjct: 12  FTYFFTLFSKFFSSFHHCTCSLSVSRQYLALDG 44

>TAR1_YEAST (Q8TGM6) Protein TAR1 (Transcript antisense to ribosomal RNA|
           protein 1)
          Length = 124

 Score = 40.8 bits (94), Expect = 0.001
 Identities = 19/33 (57%), Positives = 24/33 (72%)
 Frame = -3

Query: 156 FTFYFTTHWGFFSPFPHGTTSLSVTQEYLALQG 58
           FT++FT    FFS F H T SLSV+++YLAL G
Sbjct: 27  FTYFFTLFSKFFSSFHHCTCSLSVSRQYLALDG 59

>VP4_ROTH1 (P11198) Outer capsid protein VP4 (Hemagglutinin) (Outer layer|
           protein VP4) [Contains: Outer capsid protein VP8; Outer
           capsid protein VP5]
          Length = 775

 Score = 28.5 bits (62), Expect = 5.1
 Identities = 13/45 (28%), Positives = 21/45 (46%)
 Frame = -3

Query: 159 GFTFYFTTHWGFFSPFPHGTTSLSVTQEYLALQGGTLLIHTGFHV 25
           GF  ++ + W F+   PH TT  S T     ++     IH  F++
Sbjct: 165 GFLKFYNSVWTFYGETPHATTDYSSTSNLSEVE---TAIHVEFYI 206

>CTGE5_MOUSE (Q8R311) Cutaneous T-cell lymphoma-associated antigen 5 homolog|
           (cTAGE-5 protein) (Meningioma-expressed antigen 6)
          Length = 779

 Score = 28.5 bits (62), Expect = 5.1
 Identities = 13/28 (46%), Positives = 14/28 (50%)
 Frame = -3

Query: 189 FPSHCLGAQRGFTFYFTTHWGFFSPFPH 106
           FP   + A RGF  Y     GFF P PH
Sbjct: 724 FPGRTVYAPRGFPPYLPPRAGFFPPPPH 751

>SRY_HORSE (P36389) Sex-determining region Y protein (Testis-determining|
           factor)
          Length = 223

 Score = 27.7 bits (60), Expect = 8.7
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -3

Query: 129 GFFSPFPHGTTSLSVTQEYLALQGGTLLIHTG 34
           G   PF  G T++S  Q+ L+ Q  TL  H+G
Sbjct: 178 GAVKPFAAGATAISALQQELSQQHRTLRCHSG 209


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,158,083
Number of Sequences: 219361
Number of extensions: 550525
Number of successful extensions: 1198
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1187
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1198
length of database: 80,573,946
effective HSP length: 39
effective length of database: 72,018,867
effective search space used: 1728452808
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)