ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal15e20 |
|---|---|
| Clone Library Name | barley_pub |
>YABD_BACSU (P37545) Putative deoxyribonuclease yabD (EC 3.1.21.-)| Length = 255 Score = 37.7 bits (86), Expect = 0.015 Identities = 29/108 (26%), Positives = 42/108 (38%) Frame = +2 Query: 2 GFLTGMKSTKAKKMVKAIPLDRILLETDAPDAVPKLDNVSPVTVPLDTSDADTEKSHSDS 181 G +T + K K++VK IP DR+L+ETD P P Sbjct: 176 GPVTFKNAKKPKEVVKEIPNDRLLIETDCPFLTPH------------------------- 210 Query: 182 TSQAAASSNESLNHPANIHIVLKYVASLLEMPEAELAETSYRNATKLF 325 N P+ + V + +A L EM E+A + NA +LF Sbjct: 211 ------PFRGKRNEPSYVKYVAEQIAELKEMTFEEIASITTENAKRLF 252
>YCFH_ECOLI (P0AFQ7) Putative deoxyribonuclease ycfH (EC 3.1.21.-)| Length = 265 Score = 34.7 bits (78), Expect = 0.12 Identities = 28/115 (24%), Positives = 47/115 (40%) Frame = +2 Query: 2 GFLTGMKSTKAKKMVKAIPLDRILLETDAPDAVPKLDNVSPVTVPLDTSDADTEKSHSDS 181 G +T + + + + +PLDR+L+ETD+P P VP + Sbjct: 178 GIVTFRNAEQLRDAARYVPLDRLLVETDSPYLAP---------VPHRGKE---------- 218 Query: 182 TSQAAASSNESLNHPANIHIVLKYVASLLEMPEAELAETSYRNATKLFSYPGSKV 346 N PA + V +Y+A L + ELA+ + N +LF S++ Sbjct: 219 ------------NQPAMVRDVAEYMAVLKGVAVEELAQVTTDNFARLFHIDASRL 261
>YCFH_ECOL6 (P0AFQ8) Putative deoxyribonuclease ycfH (EC 3.1.21.-)| Length = 265 Score = 34.7 bits (78), Expect = 0.12 Identities = 28/115 (24%), Positives = 47/115 (40%) Frame = +2 Query: 2 GFLTGMKSTKAKKMVKAIPLDRILLETDAPDAVPKLDNVSPVTVPLDTSDADTEKSHSDS 181 G +T + + + + +PLDR+L+ETD+P P VP + Sbjct: 178 GIVTFRNAEQLRDAARYVPLDRLLVETDSPYLAP---------VPHRGKE---------- 218 Query: 182 TSQAAASSNESLNHPANIHIVLKYVASLLEMPEAELAETSYRNATKLFSYPGSKV 346 N PA + V +Y+A L + ELA+ + N +LF S++ Sbjct: 219 ------------NQPAMVRDVAEYMAVLKGVAVEELAQVTTDNFARLFHIDASRL 261
>YCFH_ECO57 (P0AFQ9) Putative deoxyribonuclease ycfH (EC 3.1.21.-)| Length = 265 Score = 34.7 bits (78), Expect = 0.12 Identities = 28/115 (24%), Positives = 47/115 (40%) Frame = +2 Query: 2 GFLTGMKSTKAKKMVKAIPLDRILLETDAPDAVPKLDNVSPVTVPLDTSDADTEKSHSDS 181 G +T + + + + +PLDR+L+ETD+P P VP + Sbjct: 178 GIVTFRNAEQLRDAARYVPLDRLLVETDSPYLAP---------VPHRGKE---------- 218 Query: 182 TSQAAASSNESLNHPANIHIVLKYVASLLEMPEAELAETSYRNATKLFSYPGSKV 346 N PA + V +Y+A L + ELA+ + N +LF S++ Sbjct: 219 ------------NQPAMVRDVAEYMAVLKGVAVEELAQVTTDNFARLFHIDASRL 261
>Y325_BUCBP (Q89AG7) Putative deoxyribonuclease bbp_325 (EC 3.1.21.-)| Length = 265 Score = 34.3 bits (77), Expect = 0.16 Identities = 29/111 (26%), Positives = 43/111 (38%) Frame = +2 Query: 2 GFLTGMKSTKAKKMVKAIPLDRILLETDAPDAVPKLDNVSPVTVPLDTSDADTEKSHSDS 181 G +T S + K +P+DRIL+ETD+P P VP + Sbjct: 179 GIVTFKNSKIVHETAKFVPIDRILIETDSPYLSP---------VPYRGIE---------- 219 Query: 182 TSQAAASSNESLNHPANIHIVLKYVASLLEMPEAELAETSYRNATKLFSYP 334 N PA ++ + Y+A L M A + +N KLF+ P Sbjct: 220 ------------NQPAYLYDTMLYIAQLKNMSPECFAIQTTKNFLKLFNLP 258
>YBF5_YEAST (P34220) Putative deoxyribonuclease YBL055c (EC 3.1.21.-)| Length = 418 Score = 33.9 bits (76), Expect = 0.21 Identities = 28/104 (26%), Positives = 48/104 (46%), Gaps = 9/104 (8%) Frame = +2 Query: 41 MVKAIPLDRILLETDAPDAVPKLDNVS--PVTVPLDTSDADTEKSHSDSTSQAAASSN-- 208 +VK IP +R+LLETDAP K + S + + D + S ++ A N Sbjct: 313 VVKQIPTERLLLETDAPWCEIKRTHASFQYLAKYQEVRDFEYPAFKSVKKNKLADKLNAE 372 Query: 209 -----ESLNHPANIHIVLKYVASLLEMPEAELAETSYRNATKLF 325 + N P N+ V V+ + ++ A L +T+++ K+F Sbjct: 373 ELYMVKGRNEPCNMEQVAIVVSEVKDVDLATLIDTTWKTTCKIF 416
>TATD2_HUMAN (Q93075) TatD DNase domain-containing deoxyribonuclease 2 (EC| 3.1.21.-) Length = 761 Score = 33.1 bits (74), Expect = 0.36 Identities = 14/33 (42%), Positives = 25/33 (75%) Frame = +2 Query: 8 LTGMKSTKAKKMVKAIPLDRILLETDAPDAVPK 106 LT + +A++ ++ IPL+RI++ETDAP +P+ Sbjct: 682 LTYSSAWEAREALRQIPLERIIVETDAPYFLPR 714
>POLN_FCVUR (Q66914) Non-structural polyprotein [Contains: p5.6; p32; Helicase| (2C-like protein) (p39); 3A-like protein (p30); Viral genome-linked protein (VPg) (p13); Thiol protease P3C (EC 3.4.22.-) (3C-like protease) (3C-pro); RNA-directed RNA polymera Length = 1763 Score = 32.7 bits (73), Expect = 0.47 Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 4/72 (5%) Frame = +2 Query: 98 VPKLDNVSPV-TVPLDTSDADTEKSHSDSTSQAAASSNESLN---HPANIHIVLKYVASL 265 +P ++V+ T L S+ +++ H D AA ++L+ HPAN+ + + + SL Sbjct: 75 IPSWEDVTKTSTYSLLLSEDTSDELHPDDLVNVAAHIRKALSTQSHPANVDMCKEQLTSL 134 Query: 266 LEMPEAELAETS 301 L M EA L + S Sbjct: 135 LVMAEAMLPQRS 146
>Y343_BUCAP (Q8K9J1) Putative deoxyribonuclease BUsg343 (EC 3.1.21.-)| Length = 264 Score = 32.3 bits (72), Expect = 0.62 Identities = 14/34 (41%), Positives = 22/34 (64%) Frame = +2 Query: 2 GFLTGMKSTKAKKMVKAIPLDRILLETDAPDAVP 103 G +T KS + +K IPL+++L+ETD+P P Sbjct: 184 GIITFKKSIELCNTLKKIPLEKLLIETDSPYLAP 217
>Y1582_METJA (Q58977) Putative deoxyribonuclease MJ1582 (EC 3.1.21.-)| Length = 249 Score = 32.3 bits (72), Expect = 0.62 Identities = 15/57 (26%), Positives = 29/57 (50%) Frame = +2 Query: 155 DTEKSHSDSTSQAAASSNESLNHPANIHIVLKYVASLLEMPEAELAETSYRNATKLF 325 D E +++ S + + N P N+ +V++ +A + EM E+ + Y+N K F Sbjct: 189 DLEYLTTETDSPYLSPIKGTKNEPKNVKLVIEEIAKIKEMEVEEVKDVIYKNTCKFF 245
>Y081_HAEIN (P44500) Putative deoxyribonuclease HI0081 (EC 3.1.21.-)| Length = 262 Score = 32.3 bits (72), Expect = 0.62 Identities = 12/31 (38%), Positives = 22/31 (70%) Frame = +2 Query: 2 GFLTGMKSTKAKKMVKAIPLDRILLETDAPD 94 G +T ++ K ++ + +PLD ++LETD+PD Sbjct: 185 GTITYERANKTRQAIAKLPLDALVLETDSPD 215
>Y355_BUCAI (P57436) Putative deoxyribonuclease BU355 (EC 3.1.21.-)| Length = 264 Score = 32.0 bits (71), Expect = 0.81 Identities = 14/34 (41%), Positives = 22/34 (64%) Frame = +2 Query: 2 GFLTGMKSTKAKKMVKAIPLDRILLETDAPDAVP 103 G +T S + K ++ IPL+R+L+ETD+P P Sbjct: 186 GIITFKNSLELCKTIRKIPLNRLLIETDSPYLSP 219
>YJJV_ECOLI (P39408) Putative deoxyribonuclease yjjV (EC 3.1.21.-)| Length = 259 Score = 32.0 bits (71), Expect = 0.81 Identities = 13/31 (41%), Positives = 22/31 (70%) Frame = +2 Query: 2 GFLTGMKSTKAKKMVKAIPLDRILLETDAPD 94 G +T +++K + ++ +PL +LLETDAPD Sbjct: 180 GTITYPRASKTRDVIAKLPLASLLLETDAPD 210
>YA9A_SCHPO (Q09788) Hypothetical serine-rich protein C13G6.10c precursor| Length = 530 Score = 31.2 bits (69), Expect = 1.4 Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 6/84 (7%) Frame = +2 Query: 107 LDNV-----SPVTVPLDTSDADTEKSHSDSTSQAAASSNESLNHPA-NIHIVLKYVASLL 268 +DNV S +VP+ T + S TS A SS S ++PA + + Y AS Sbjct: 118 MDNVTAPVWSNTSVPVSTPETSATSSSEFFTSYPATSSESSSSYPASSTEVASSYSASST 177 Query: 269 EMPEAELAETSYRNATKLFSYPGS 340 E+ + A + +T + P S Sbjct: 178 EVTSSYPASSEVATSTSSYVAPVS 201
>Y454_HAEIN (P44718) Putative deoxyribonuclease HI0454 (EC 3.1.21.-)| Length = 260 Score = 31.2 bits (69), Expect = 1.4 Identities = 24/108 (22%), Positives = 45/108 (41%) Frame = +2 Query: 2 GFLTGMKSTKAKKMVKAIPLDRILLETDAPDAVPKLDNVSPVTVPLDTSDADTEKSHSDS 181 G +T + +++++ +P++R+L+ETD+P P VP + Sbjct: 179 GIVTFKNAEAIREVIRYVPMERLLVETDSPYLAP---------VPYRGKE---------- 219 Query: 182 TSQAAASSNESLNHPANIHIVLKYVASLLEMPEAELAETSYRNATKLF 325 N PA V +YVA+L + A+ + +N +LF Sbjct: 220 ------------NQPAYTREVCEYVATLKGVSAEAFAQITTQNFERLF 255
>PHK_NITEU (Q82T07) Probable phosphoketolase (EC 4.1.2.-)| Length = 790 Score = 30.8 bits (68), Expect = 1.8 Identities = 15/57 (26%), Positives = 27/57 (47%) Frame = +3 Query: 45 SKQYPWTEFC*RQMHQMQYQSWTMFLQSQSLWTLQMRILKSLTAIRPLRRLPLQTNP 215 S Q P +E + H Q ++W + + L+ Q R+++ L + PL + NP Sbjct: 307 SHQVPLSELAKKPEHIQQLEAWLRSYRPEELFDTQGRLVEPLQTLAPLGNRRMGANP 363
>PDC2_ORYSA (P51848) Pyruvate decarboxylase isozyme 2 (EC 4.1.1.1) (PDC)| Length = 603 Score = 30.8 bits (68), Expect = 1.8 Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 2/62 (3%) Frame = +2 Query: 197 ASSNESLNHPANIHIVLKYVASLLEMPEAELAET--SYRNATKLFSYPGSKVHHEAEAG* 370 AS+ E N P ++++ K+V +L A +AET S+ N KL G + + G Sbjct: 395 ASAGEEPNEPLRVNVLFKHVQKMLNSDSAVIAETGDSWFNCQKLKLPEGCGYEFQMQYGS 454 Query: 371 FG 376 G Sbjct: 455 IG 456
>BAP1_HUMAN (Q92560) Ubiquitin carboxyl-terminal hydrolase BAP1 (EC 3.4.19.12)| (BRCA1-associated protein 1) (Cerebral protein 6) Length = 729 Score = 30.4 bits (67), Expect = 2.3 Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 2/66 (3%) Frame = +2 Query: 77 ETDAPDAVPKLDNVSPVTVPLDTSDADTEKSHSDSTSQAAASSNESLNH--PANIHIVLK 250 E+ P+ N SP+ + + + A +E +H+D +AA S ++ +H P +V+K Sbjct: 278 ESQLPEESKSASNKSPLVLEANRAPAASEGNHTDGAEEAAGSCAQAPSHSPPNKPKLVVK 337 Query: 251 YVASLL 268 S L Sbjct: 338 PPGSSL 343
>Y504_CHLTR (O84512) Protein CT_504| Length = 288 Score = 30.0 bits (66), Expect = 3.1 Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 1/64 (1%) Frame = +2 Query: 17 MKSTKAKKMVKAIPLDRILLETDAPDAVPKLDNVSP-VTVPLDTSDADTEKSHSDSTSQA 193 M+ AK +KA+ LDR + + +A+ K+ V+P V+V D + E+ +DST A Sbjct: 69 MEIRDAKINLKAVGLDRGVKIVGSREALLKMPKVAPIVSVSEDNTIVSEEEVVADSTVAA 128 Query: 194 AASS 205 AS+ Sbjct: 129 PAST 132
>GLNA_SULAC (Q9HH09) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 473 Score = 30.0 bits (66), Expect = 3.1 Identities = 12/23 (52%), Positives = 15/23 (65%) Frame = +1 Query: 325 LLPWIQGSPRS*SWVIWGGAGGR 393 L+PW+QG R + V WGG GR Sbjct: 83 LIPWMQGVARVLTKVFWGGGKGR 105
>EP84_HCMVA (P17151) Early phosphoprotein p84| Length = 684 Score = 29.6 bits (65), Expect = 4.0 Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 6/84 (7%) Frame = +2 Query: 125 VTVPLDTSDADTEKSHSDSTSQAAASSNESLNHPANIHIVLKYVA---SLLEMP---EAE 286 +++PLDTS+A ++S S+S ++SSN +H + + V A L +P A Sbjct: 298 MSLPLDTSEAVAFLNYSSSSSAVSSSSNNHHHHHHHHNAVTDVAAGTDGALLLPIERGAV 357 Query: 287 LAETSYRNATKLFSYPGSKVHHEA 358 ++ S + + L S P H A Sbjct: 358 VSSPSSTSPSSLLSLPRPSSAHSA 381
>TATD_ECOLI (P27859) Deoxyribonuclease tatD (EC 3.1.21.-) (DNase tatD)| Length = 260 Score = 29.6 bits (65), Expect = 4.0 Identities = 24/102 (23%), Positives = 45/102 (44%) Frame = +2 Query: 20 KSTKAKKMVKAIPLDRILLETDAPDAVPKLDNVSPVTVPLDTSDADTEKSHSDSTSQAAA 199 + + ++++ IP +++L+ETDAP +P+ D T + ++ Sbjct: 182 RGLELRELLPLIPAEKLLIETDAPYLLPR-----------------------DLTPKPSS 218 Query: 200 SSNESLNHPANIHIVLKYVASLLEMPEAELAETSYRNATKLF 325 NE PA++ +L+ +A A LA T+ N LF Sbjct: 219 RRNE----PAHLPHILQRIAHWRGEDAAWLAATTDANVKTLF 256
>NQRB_CHLTR (O84280) Probable Na(+)-translocating NADH-quinone reductase| subunit B (EC 1.6.5.-) (Na(+)-translocating NQR subunit B) (Na(+)-NQR subunit B) (NQR complex subunit B) (NQR-1 subunit B) Length = 503 Score = 29.3 bits (64), Expect = 5.2 Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 4/82 (4%) Frame = +2 Query: 113 NVSPVTVPLDTSDADTEKSHSDSTSQAAASSNESLNHPA--NIHI--VLKYVASLLEMPE 280 N S + L T + EKSH D SQ+ + P+ +HI + + +L +P Sbjct: 221 NPSRIKESLATMSSLAEKSHFDGFSQSTCLQVLNSTPPSVKRVHIDAIASNILNLEHVPT 280 Query: 281 AELAETSYRNATKLFSYPGSKV 346 ++ +T + AT SYPG V Sbjct: 281 QDVLQTQF--ATWAESYPGLTV 300
>Y017_UREPA (Q9PRC8) Putative deoxyribonuclease UU017 (EC 3.1.21.-)| Length = 265 Score = 29.3 bits (64), Expect = 5.2 Identities = 12/20 (60%), Positives = 15/20 (75%) Frame = +2 Query: 44 VKAIPLDRILLETDAPDAVP 103 +K PLD+IL+ETDAP P Sbjct: 199 IKITPLDKILVETDAPYLTP 218
>SHC1_HUMAN (P29353) SHC transforming protein 1 (SH2 domain protein C1) (Src| homology 2 domain-containing transforming protein C1) Length = 583 Score = 29.3 bits (64), Expect = 5.2 Identities = 13/23 (56%), Positives = 14/23 (60%), Gaps = 2/23 (8%) Frame = -1 Query: 392 RPPAPPQITQL--QLRGEPWIQG 330 R P PPQ + QLRGEPW G Sbjct: 469 RVPPPPQSVSMAEQLRGEPWFHG 491
>PLMP_GRIFR (P81054) Peptidyl-Lys metalloendopeptidase precursor (EC 3.4.24.20)| (MEP) (GfMEP) Length = 348 Score = 28.9 bits (63), Expect = 6.8 Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 6/70 (8%) Frame = +2 Query: 74 LETDAPDAVPKLDNVSPVTVPLDTSDA------DTEKSHSDSTSQAAASSNESLNHPANI 235 L+ P+AV ++N+ VT +T D D + + A +NES P+ I Sbjct: 24 LKVSGPEAVDGVNNLKVVTTITNTGDETLKLLNDPRGALHTMPTDTFAITNESGETPSFI 83 Query: 236 HIVLKYVASL 265 + +KYV S+ Sbjct: 84 GVKVKYVPSM 93
>MLL4_HUMAN (Q9UMN6) Myeloid/lymphoid or mixed-lineage leukemia protein 4| (Trithorax homolog 2) Length = 2715 Score = 28.5 bits (62), Expect = 8.9 Identities = 12/22 (54%), Positives = 15/22 (68%) Frame = +3 Query: 288 SPRRATGTPPNCSPTLDPRFTT 353 +P ATG PP SPT+ P+ TT Sbjct: 498 TPSTATGGPPEDSPTVAPKSTT 519
>Y1661_MYCLE (Q9CBS6) Hypothetical protein ML1661| Length = 245 Score = 28.5 bits (62), Expect = 8.9 Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 3/55 (5%) Frame = +2 Query: 62 DRILLETDAPDAVP-KLDNVSPVTVPLDTSDA--DTEKSHSDSTSQAAASSNESL 217 D + L D DA+P +LD+ V LD DA + K+H+DS +A + +ESL Sbjct: 33 DVLELIDDIKDAIPGELDDAQDV---LDARDAMLNDAKAHADSMVSSATTESESL 84
>ICP0_BHV1K (P29836) Trans-acting transcriptional protein ICP0 (P135 protein)| (IER 2.9/ER2.6) Length = 676 Score = 28.5 bits (62), Expect = 8.9 Identities = 13/24 (54%), Positives = 18/24 (75%) Frame = +2 Query: 137 LDTSDADTEKSHSDSTSQAAASSN 208 LDTSD+D+E S DS S++ SS+ Sbjct: 283 LDTSDSDSEGSEDDSWSESEESSS 306
>ICP0_BHV1J (P29128) Trans-acting transcriptional protein ICP0 (P135 protein)| (IER 2.9/ER2.6) Length = 676 Score = 28.5 bits (62), Expect = 8.9 Identities = 13/24 (54%), Positives = 18/24 (75%) Frame = +2 Query: 137 LDTSDADTEKSHSDSTSQAAASSN 208 LDTSD+D+E S DS S++ SS+ Sbjct: 283 LDTSDSDSEGSEDDSWSESEESSS 306
>YE38_SCHPO (O13892) Hypothetical protein C20G4.08 in chromosome I| Length = 1076 Score = 28.5 bits (62), Expect = 8.9 Identities = 20/47 (42%), Positives = 21/47 (44%), Gaps = 3/47 (6%) Frame = +2 Query: 86 APDAVPKL---DNVSPVTVPLDTSDADTEKSHSDSTSQAAASSNESL 217 APD VP S V+V DTS D EK S Q A ESL Sbjct: 893 APDVVPSSYPPAAESNVSVSSDTSTKDVEKQEPSSAEQPAQGIAESL 939
>RAN1_SCHPO (P08092) Negative regulator of sexual conjugation and meiosis (EC| 2.7.11.1) Length = 470 Score = 28.5 bits (62), Expect = 8.9 Identities = 24/95 (25%), Positives = 39/95 (41%) Frame = +2 Query: 50 AIPLDRILLETDAPDAVPKLDNVSPVTVPLDTSDADTEKSHSDSTSQAAASSNESLNHPA 229 A P + L+ P++ K+D +P+T P+ TE + + AAA N + ++ Sbjct: 365 ATPTIPVSLQVLTPNSSLKVDPTTPLTAPIHA----TESFWPSAAAAAAAVHNNANSY-- 418 Query: 230 NIHIVLKYVASLLEMPEAELAETSYRNATKLFSYP 334 MP + T Y N K+F YP Sbjct: 419 --------------MP---ITPTPYPNNAKIFGYP 436
>PK3CB_HUMAN (P42338) Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic| subunit beta isoform (EC 2.7.1.153) (PI3-kinase p110 subunit beta) (PtdIns-3-kinase p110) (PI3K) (PI3Kbeta) Length = 1070 Score = 28.5 bits (62), Expect = 8.9 Identities = 12/35 (34%), Positives = 20/35 (57%) Frame = -2 Query: 298 RLGEFCFWHFKQRCHILQNNVDVSWMIQGFV*RGS 194 R+G+F FWH + HI +V +++ + RGS Sbjct: 669 RIGQFLFWHLRSEVHIPAVSVQFGVILEAYC-RGS 702 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 67,861,049 Number of Sequences: 219361 Number of extensions: 1320944 Number of successful extensions: 4245 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 4076 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4237 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 3026354448 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
