>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,|
           chloroplast precursor (RuBisCO activase A) (RA A)
          Length = 464

 Score = 74.3 bits (181), Expect = 9e-14
 Identities = 37/39 (94%), Positives = 37/39 (94%)
 Frame = +2

Query: 2   AAFSSTVGAXASTPTNFLGKKLKKQVTSXVNYHGKSSKA 118
           AAFSSTVGA ASTPTNFLGKKLKKQVTS VNYHGKSSKA
Sbjct: 3   AAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSKA 41

>RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 432

 Score = 70.9 bits (172), Expect = 1e-12
 Identities = 35/37 (94%), Positives = 35/37 (94%)
 Frame = +2

Query: 2   AAFSSTVGAXASTPTNFLGKKLKKQVTSXVNYHGKSS 112
           AAFSSTVGA ASTPTNFLGKKLKKQVTS VNYHGKSS
Sbjct: 3   AAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSS 39

>RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 433

 Score = 52.8 bits (125), Expect = 3e-07
 Identities = 30/42 (71%), Positives = 34/42 (80%), Gaps = 3/42 (7%)
 Frame = +2

Query: 2   AAFSSTVGAXASTPT--NFLGKKLKK-QVTSXVNYHGKSSKA 118
           AAFSSTVGA ASTPT  +FLGKKL K QV++ V YHGKSS +
Sbjct: 3   AAFSSTVGAPASTPTRSSFLGKKLNKPQVSAAVTYHGKSSSS 44

>RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B,|
           chloroplast precursor (RuBisCO activase B) (RA B)
          Length = 425

 Score = 40.4 bits (93), Expect = 0.001
 Identities = 22/34 (64%), Positives = 24/34 (70%)
 Frame = +2

Query: 2   AAFSSTVGAXASTPTNFLGKKLKKQVTSXVNYHG 103
           +AFSSTVGA ASTPT FLGKK+K        YHG
Sbjct: 3   SAFSSTVGAPASTPTIFLGKKVKNY------YHG 30


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,368,512
Number of Sequences: 219361
Number of extensions: 78550
Number of successful extensions: 143
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 141
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 141
length of database: 80,573,946
effective HSP length: 14
effective length of database: 77,502,892
effective search space used: 1860069408
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)