ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal14o03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1YCF1A_ANTFO (Q85BK9) Hypothetical 58 kDa protein ycf1 (ORF473) 32 1.3
2YTR1_EBV (P30119) Hypothetical protein BTRF1 30 2.9

>YCF1A_ANTFO (Q85BK9) Hypothetical 58 kDa protein ycf1 (ORF473)|
          Length = 473

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 16/36 (44%), Positives = 24/36 (66%)
 Frame = +3

Query: 300 QKMFYTIHSRASSSRIGIDVPRVSERLRALLQLYSH 407
           QK FY+I +  SSSR   ++ R+++R R  L LYS+
Sbjct: 99  QKEFYSIFASDSSSRYTREIERLNKRYRCNLFLYSY 134



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>YTR1_EBV (P30119) Hypothetical protein BTRF1|
          Length = 425

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
 Frame = +3

Query: 207 CMKRPIKXHEVITIHEEEGAEIIN-ANHSVAGQKMFYTIHSRASSSRIGI 353
           C KR      V+   ++ GA  I+ A H  +GQ +F+TIHS   +S +G+
Sbjct: 11  CAKRQPPSTAVMLKCKQPGARFIHGAVHLPSGQIVFHTIHSPTLASALGL 60


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,843,201
Number of Sequences: 219361
Number of extensions: 1328520
Number of successful extensions: 3828
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3711
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3828
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3754426130
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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