Clone Information

BLAST Search Result

Clone Name	baal15c22
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast...	185	2e-47
2	CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast...	171	5e-43
3	CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloropl...	168	3e-42
4	CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloropla...	166	1e-41
5	CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloropl...	164	4e-41
6	CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloropl...	164	5e-41
7	CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloropla...	163	8e-41
8	CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloropla...	163	8e-41
9	CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloropla...	162	2e-40
10	CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloropl...	162	2e-40
11	CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloropl...	162	2e-40
12	CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chlorop...	161	3e-40
13	CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloropl...	160	7e-40
14	CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast...	160	7e-40
15	CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chlorop...	159	2e-39
16	CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloropla...	157	6e-39
17	CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chlorop...	157	6e-39
18	CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloropl...	155	2e-38
19	CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloropla...	155	3e-38
20	CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloropl...	153	8e-38
21	CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloropl...	152	1e-37
22	CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloropla...	152	2e-37
23	CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloropl...	151	3e-37
24	CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloropla...	149	1e-36
25	CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloropla...	149	2e-36
26	CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 membe...	149	2e-36
27	CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast...	149	2e-36
28	CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloropl...	148	3e-36
29	CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII typ...	148	4e-36
30	CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast...	147	8e-36
31	CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chl...	147	8e-36
32	CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 membe...	145	2e-35
33	CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloropla...	145	2e-35
34	CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloropl...	145	3e-35
35	CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast...	144	4e-35
36	CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 membe...	135	2e-32
37	CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloropla...	133	1e-31
38	CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloropl...	129	2e-30
39	CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chlorop...	128	4e-30
40	CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloropla...	127	5e-30
41	CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloropl...	127	8e-30
42	CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloropla...	127	8e-30
43	CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast ...	126	1e-29
44	CB21_SILPR (P12332) Chlorophyll a-b binding protein, chloroplast...	125	2e-29
45	CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chlo...	125	2e-29
46	CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII ty...	124	7e-29
47	CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast...	122	2e-28
48	CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII typ...	121	5e-28
49	CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloropla...	117	9e-27
50	CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloropl...	114	4e-26
51	CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII typ...	113	1e-25
52	CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type...	112	2e-25
53	CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type...	107	5e-24
54	CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chlorop...	105	3e-23
55	CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII typ...	105	3e-23
56	CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type...	102	2e-22
57	CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type...	77	1e-14
58	CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloro...	74	6e-14
59	CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloropla...	66	2e-11
60	CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast...	60	1e-09
61	LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins pre...	56	2e-08
62	CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloropl...	56	2e-08
63	CB4_SPIOL (P36494) Chlorophyll a-b binding protein CP24, chlorop...	51	6e-07
64	CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, ch...	51	8e-07
65	LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins pre...	50	1e-06
66	CB4B_LYCES (P27525) Chlorophyll a-b binding protein CP24 10B, ch...	49	2e-06
67	CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloropla...	47	1e-05
68	CB2F_LYCES (P14277) Chlorophyll a-b binding protein 3B, chloropl...	44	9e-05
69	CB2E_LYCES (P14276) Chlorophyll a-b binding protein 3A, chloropl...	43	2e-04
70	CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloropla...	40	0.001
71	FCP_ISOGA (Q39709) Fucoxanthin-chlorophyll a-c binding protein, ...	35	0.057
72	CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chlo...	34	0.074
73	CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chlo...	32	0.28
74	CB2C_LYCES (P14275) Chlorophyll a-b binding protein 1C, chloropl...	32	0.37
75	SHC1_HUMAN (P29353) SHC transforming protein 1 (SH2 domain prote...	31	0.63
76	DOCK5_HUMAN (Q9H7D0) Dedicator of cytokinesis protein 5 (Fragment)	31	0.82
77	CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chlo...	31	0.82
78	GLNA_MACFA (Q4R7U3) Glutamine synthetase (EC 6.3.1.2) (Glutamate...	30	1.1
79	CB2A_LYCES (P14274) Chlorophyll a-b binding protein 1A, chloropl...	30	1.4
80	GLNA_XENLA (P51121) Glutamine synthetase (EC 6.3.1.2) (Glutamate...	30	1.4
81	CB29_CHLRE (Q93WD2) Chlorophyll a-b binding protein CP29	30	1.8
82	NCOR2_MOUSE (Q9WU42) Nuclear receptor corepressor 2 (N-CoR2) (Si...	29	3.1
83	SYNJ2_RAT (O55207) Synaptojanin-2 (EC 3.1.3.36) (Synaptic inosit...	29	3.1
84	GLNA_RAT (P09606) Glutamine synthetase (EC 6.3.1.2) (Glutamate--...	29	3.1
85	GLNA_PIG (P46410) Glutamine synthetase (EC 6.3.1.2) (Glutamate--...	29	3.1
86	GLNA_CRIGR (P04773) Glutamine synthetase (EC 6.3.1.2) (Glutamate...	29	3.1
87	GLNA_CANFA (Q8HZM5) Glutamine synthetase (EC 6.3.1.2) (Glutamate...	29	3.1
88	S2A4R_HUMAN (Q9NR83) SLC2A4 regulator (GLUT4 enhancer factor) (G...	28	4.1
89	MUC1_YEAST (P08640) Mucin-like protein 1 precursor	28	4.1
90	SYN2_RAT (Q63537) Synapsin-2 (Synapsin II)	28	4.1
91	GLNA_MOUSE (P15105) Glutamine synthetase (EC 6.3.1.2) (Glutamate...	28	4.1
92	GLNA_HUMAN (P15104) Glutamine synthetase (EC 6.3.1.2) (Glutamate...	28	4.1
93	GLNA_ACOCA (Q9QY94) Glutamine synthetase (EC 6.3.1.2) (Glutamate...	28	4.1
94	MRP7_ARATH (Q9LK62) Multidrug resistance-associated protein 7 (E...	28	4.1
95	GLNA_HEBCY (Q96UV5) Glutamine synthetase (EC 6.3.1.2) (Glutamate...	28	5.3
96	KAS2_STRGA (P16539) Tetracenomycin C polyketide putative beta-ke...	28	5.3
97	GLNA_TUBBO (Q86ZU6) Glutamine synthetase (EC 6.3.1.2) (Glutamate...	28	5.3
98	FPGT_HUMAN (O14772) Fucose-1-phosphate guanylyltransferase (EC 2...	28	5.3
99	ALDA_ECOLI (P25553) Aldehyde dehydrogenase A (EC 1.2.1.22) (Lact...	28	6.9
100	NCOR2_HUMAN (Q9Y618) Nuclear receptor corepressor 2 (N-CoR2) (Si...	28	6.9
101	MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, trac...	28	6.9
102	FLP1_SCHPO (Q9P7H1) Tyrosine-protein phosphatase CDC14 homolog (...	28	6.9
103	ABFB_STRLI (P96463) Alpha-L-arabinofuranosidase precursor (EC 3....	28	6.9
104	ABFB_STRCO (O54161) Alpha-L-arabinofuranosidase precursor (EC 3....	28	6.9
105	ZN499_HUMAN (Q96K62) Zinc finger protein 499	28	6.9
106	GCSH2_PSEAE (Q9HTX6) Glycine cleavage system H protein 2	27	9.1
107	DOCK_SULAC (P27414) Probable signal recognition particle protein...	27	9.1
108	PYGO_DROME (Q9V9W8) Protein pygopus (Protein gammy legs)	27	9.1
109	GUN1_RALSO (P58599) Endoglucanase precursor (EC 3.2.1.4) (Endo-1...	27	9.1
110	GLNA_CHICK (P16580) Glutamine synthetase (EC 6.3.1.2) (Glutamate...	27	9.1
111	IF2_CORDI (Q6NGN2) Translation initiation factor IF-2	27	9.1

>CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 266

 Score =  185 bits (470), Expect = 2e-47
 Identities = 87/97 (89%), Positives = 90/97 (92%)
 Frame = +3

Query: 99  GKAVKDLPSSALFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEF 278
           GKAVK+LPSSAL G+ARV MRKTAAKAK V    PWYGSDRVLYLGPLSG+PPSYLTGEF
Sbjct: 15  GKAVKNLPSSALIGDARVNMRKTAAKAKQVSSSSPWYGSDRVLYLGPLSGEPPSYLTGEF 74

Query: 279 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 389
           PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL
Sbjct: 75  PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 111

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>CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 265

 Score =  171 bits (432), Expect = 5e-43
 Identities = 85/98 (86%), Positives = 89/98 (90%), Gaps = 1/98 (1%)
 Frame = +3

Query: 99  GKAVKDLPSSALFGEARVTMRKTAAKAKPVXXX-XPWYGSDRVLYLGPLSGDPPSYLTGE 275
           GKAV ++PSS+ FGEARVTMRKTAAKAKP      PWYG DRVLYLGPLSG+PPSYLTGE
Sbjct: 15  GKAV-NVPSSS-FGEARVTMRKTAAKAKPAAASGSPWYGPDRVLYLGPLSGEPPSYLTGE 72

Query: 276 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 389
           FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL
Sbjct: 73  FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 110

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>CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloroplast precursor|
           (LHCII type I CAB-M9) (LHCP)
          Length = 265

 Score =  168 bits (425), Expect = 3e-42
 Identities = 85/98 (86%), Positives = 88/98 (89%), Gaps = 1/98 (1%)
 Frame = +3

Query: 99  GKAVKDLPSSALFGEARVTMRKTAAKAKPVXXX-XPWYGSDRVLYLGPLSGDPPSYLTGE 275
           GKAV ++PSS LFGEARVTMRKTAAKAKP      PWYG DRVLYLGPLSG+PPSYLTGE
Sbjct: 15  GKAV-NVPSS-LFGEARVTMRKTAAKAKPAASSGSPWYGPDRVLYLGPLSGEPPSYLTGE 72

Query: 276 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 389
           FPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGAL
Sbjct: 73  FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGAL 110

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>CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 265

 Score =  166 bits (421), Expect = 1e-41
 Identities = 79/90 (87%), Positives = 82/90 (91%), Gaps = 1/90 (1%)
 Frame = +3

Query: 123 SSALFGEARVTMRKTAAKAKPVXXX-XPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWD 299
           SSALFGEAR+TMRKTAAK KP      PWYG+DRVLYLGPLSG+PPSYLTGEFPGDYGWD
Sbjct: 21  SSALFGEARITMRKTAAKPKPAASSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWD 80

Query: 300 TAGLSADPETFAKNRELEVIHCRWAMLGAL 389
           TAGLSADPETFAKNRELEVIH RWAMLGAL
Sbjct: 81  TAGLSADPETFAKNRELEVIHSRWAMLGAL 110

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>CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloroplast precursor|
           (LHCII type I CAB-16) (LHCP)
          Length = 266

 Score =  164 bits (416), Expect = 4e-41
 Identities = 79/98 (80%), Positives = 84/98 (85%), Gaps = 1/98 (1%)
 Frame = +3

Query: 99  GKAVKDLPSSA-LFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGE 275
           GKAVK  PSS+ + G  +VTMRKTA+KAKPV    PWYG DRV YLGP SG+ PSYLTGE
Sbjct: 14  GKAVKLSPSSSEVTGNGKVTMRKTASKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGE 73

Query: 276 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 389
           FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL
Sbjct: 74  FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 111

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>CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor|
           (LHCII type I CAB-3C) (LHCP)
          Length = 267

 Score =  164 bits (415), Expect = 5e-41
 Identities = 79/98 (80%), Positives = 82/98 (83%), Gaps = 1/98 (1%)
 Frame = +3

Query: 99  GKAVKDLPSSA-LFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGE 275
           GKAVK  PSS+ + G  RVTMRKTA KAKP     PWYG DRV YLGP SG+ PSYLTGE
Sbjct: 15  GKAVKLSPSSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYLGPFSGESPSYLTGE 74

Query: 276 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 389
           FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL
Sbjct: 75  FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 112

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>CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloroplast precursor|
           (LHCII type I CAB-E) (LHCP)
          Length = 266

 Score =  163 bits (413), Expect = 8e-41
 Identities = 79/98 (80%), Positives = 83/98 (84%), Gaps = 1/98 (1%)
 Frame = +3

Query: 99  GKAVKDLPSSA-LFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGE 275
           GKAVK  PSS+ + G  +VTMRKTA KAKPV    PWYG DRV YLGP SG+ PSYLTGE
Sbjct: 14  GKAVKLSPSSSEVTGNGKVTMRKTANKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGE 73

Query: 276 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 389
           FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL
Sbjct: 74  FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 111

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>CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloroplast precursor|
           (LHCII type I CAB-C) (LHCP)
          Length = 267

 Score =  163 bits (413), Expect = 8e-41
 Identities = 78/98 (79%), Positives = 84/98 (85%), Gaps = 1/98 (1%)
 Frame = +3

Query: 99  GKAVKDLPSSA-LFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGE 275
           GKAVK  PSS+ + G  +VTMRKTA+KAKPV    PWYG +RV YLGP SG+ PSYLTGE
Sbjct: 15  GKAVKLSPSSSEITGNGKVTMRKTASKAKPVSSSSPWYGPNRVKYLGPFSGESPSYLTGE 74

Query: 276 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 389
           FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL
Sbjct: 75  FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 112

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>CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 261

 Score =  162 bits (410), Expect = 2e-40
 Identities = 73/89 (82%), Positives = 80/89 (89%)
 Frame = +3

Query: 123 SSALFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDT 302
           ++ +FGE R+TMRK+AAK KP     PWYG+DRVLYLGPLSG+PPSYLTGEFPGDYGWDT
Sbjct: 18  AAKVFGEGRITMRKSAAKPKPAASGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDT 77

Query: 303 AGLSADPETFAKNRELEVIHCRWAMLGAL 389
           AGLSADPETFAKNRELEVIH RWAMLGAL
Sbjct: 78  AGLSADPETFAKNRELEVIHSRWAMLGAL 106

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>CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloroplast precursor|
           (LHCII type I CAB-50) (LHCP)
          Length = 267

 Score =  162 bits (409), Expect = 2e-40
 Identities = 77/98 (78%), Positives = 82/98 (83%), Gaps = 1/98 (1%)
 Frame = +3

Query: 99  GKAVKDLPSSA-LFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGE 275
           GKAVK  PSS+ + G  +VTMRKT  KAKP+    PWYG DRV YLGP SG+ PSYLTGE
Sbjct: 15  GKAVKLSPSSSEITGNGKVTMRKTVTKAKPLSSGSPWYGPDRVKYLGPFSGESPSYLTGE 74

Query: 276 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 389
           FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL
Sbjct: 75  FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 112

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>CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloroplast precursor|
           (LHCII type I CAB-40) (LHCP)
          Length = 267

 Score =  162 bits (409), Expect = 2e-40
 Identities = 78/98 (79%), Positives = 83/98 (84%), Gaps = 1/98 (1%)
 Frame = +3

Query: 99  GKAVKDLPSSA-LFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGE 275
           GKAVK  PSS+ + G  +VTMRKTA+KAK V    PWYG DRV YLGP SG+ PSYLTGE
Sbjct: 15  GKAVKLSPSSSEITGNGKVTMRKTASKAKTVSSGSPWYGPDRVKYLGPFSGESPSYLTGE 74

Query: 276 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 389
           FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL
Sbjct: 75  FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 112

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>CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chloroplast precursor|
           (LHCII type I CAB-22L) (LHCP)
          Length = 267

 Score =  161 bits (408), Expect = 3e-40
 Identities = 77/98 (78%), Positives = 81/98 (82%), Gaps = 1/98 (1%)
 Frame = +3

Query: 99  GKAVKDLPSSA-LFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGE 275
           GK VK  PSS+ + G  + TMRKTA KAKPV    PWYG DRV YLGP SG+ PSYLTGE
Sbjct: 15  GKVVKLSPSSSEITGNGKATMRKTATKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGE 74

Query: 276 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 389
           FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL
Sbjct: 75  FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 112

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>CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor|
           (LHCII type I CAB-25) (LHCP)
          Length = 266

 Score =  160 bits (405), Expect = 7e-40
 Identities = 75/97 (77%), Positives = 78/97 (80%)
 Frame = +3

Query: 99  GKAVKDLPSSALFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEF 278
           GKAV    SS + G  + TMRKT  KAKPV    PWYG DRV YLGP SG+ PSYLTGEF
Sbjct: 15  GKAVNVPSSSQITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEF 74

Query: 279 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 389
           PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL
Sbjct: 75  PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 111

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>CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 267

 Score =  160 bits (405), Expect = 7e-40
 Identities = 77/98 (78%), Positives = 81/98 (82%), Gaps = 1/98 (1%)
 Frame = +3

Query: 99  GKAVKDLPS-SALFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGE 275
           GKAVK  P+ S + GE R+TMRKTA K K V    PWYG DRV YLGP SG+ PSYLTGE
Sbjct: 15  GKAVKLGPTASEIIGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYLGPFSGESPSYLTGE 74

Query: 276 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 389
           FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL
Sbjct: 75  FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 112

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>CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chloroplast precursor|
           (LHCII type I CAB-91R) (LHCP)
          Length = 267

 Score =  159 bits (401), Expect = 2e-39
 Identities = 76/98 (77%), Positives = 80/98 (81%), Gaps = 1/98 (1%)
 Frame = +3

Query: 99  GKAVKDLPSSA-LFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGE 275
           GKAVK  PSS+ + G  + TMRKT  KAKPV    PWYG DRV YLGP SG+ PSYLTGE
Sbjct: 15  GKAVKFSPSSSEITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGE 74

Query: 276 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 389
           FPGDYGWDTA LSADPETFAKNRELEVIHCRWAMLGAL
Sbjct: 75  FPGDYGWDTAELSADPETFAKNRELEVIHCRWAMLGAL 112

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>CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloroplast precursor|
           (LHCII type I CAB-7) (LHCP)
          Length = 267

 Score =  157 bits (397), Expect = 6e-39
 Identities = 75/98 (76%), Positives = 79/98 (80%), Gaps = 1/98 (1%)
 Frame = +3

Query: 99  GKAVKDLPSSA-LFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGE 275
           G AVK  PSS+ + G  +  MRKT  KAKPV    PWYG DRV YLGP SG+ PSYLTGE
Sbjct: 15  GNAVKLSPSSSEITGNGKAIMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGE 74

Query: 276 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 389
           FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL
Sbjct: 75  FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 112

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>CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chloroplast precursor|
           (LHCII type I CAB-22R) (LHCP)
          Length = 267

 Score =  157 bits (397), Expect = 6e-39
 Identities = 75/98 (76%), Positives = 78/98 (79%), Gaps = 1/98 (1%)
 Frame = +3

Query: 99  GKAVK-DLPSSALFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGE 275
           GKAVK    SS + G  +VTMRKT  KAKP     PWYG DRV YLGP SG+ PSYLTGE
Sbjct: 15  GKAVKLSSSSSEITGNGKVTMRKTVTKAKPASSSSPWYGPDRVKYLGPFSGEAPSYLTGE 74

Query: 276 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 389
           FP DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL
Sbjct: 75  FPSDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 112

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>CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloroplast precursor|
           (LHCII type I CAB-48) (LHCP)
          Length = 264

 Score =  155 bits (393), Expect = 2e-38
 Identities = 69/82 (84%), Positives = 73/82 (89%)
 Frame = +3

Query: 132 LFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGL 311
           +FGE R+TMRKTAAK KP     PWYG+DRVLYLGPLSG PPSYLTGEFPGDYGWDT GL
Sbjct: 24  VFGEGRITMRKTAAKPKPARSGSPWYGADRVLYLGPLSGSPPSYLTGEFPGDYGWDTEGL 83

Query: 312 SADPETFAKNRELEVIHCRWAM 377
           SADPETFAKNRELEVIHCRWA+
Sbjct: 84  SADPETFAKNRELEVIHCRWAI 105

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>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 266

 Score =  155 bits (391), Expect = 3e-38
 Identities = 76/98 (77%), Positives = 80/98 (81%), Gaps = 1/98 (1%)
 Frame = +3

Query: 99  GKAVKDLP-SSALFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGE 275
           GKAVK  P +S +FG  RVTMRKT     P     PWYGSDRV YLGP SG+PPSYLTGE
Sbjct: 15  GKAVKLSPGASEVFGTGRVTMRKTVKPTGP--SGSPWYGSDRVKYLGPFSGEPPSYLTGE 72

Query: 276 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 389
           FPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGAL
Sbjct: 73  FPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGAL 110

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>CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloroplast precursor|
           (LHCII type I CAB-13) (LHCP)
          Length = 266

 Score =  153 bits (387), Expect = 8e-38
 Identities = 72/97 (74%), Positives = 76/97 (78%)
 Frame = +3

Query: 99  GKAVKDLPSSALFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEF 278
           GKAV    SS +    +VTMRKT  KAKPV    PWYG DRV YLGP SG+ PSYLTGEF
Sbjct: 15  GKAVNVPSSSEITRNGKVTMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEF 74

Query: 279 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 389
           PGDYGWDTAGLSADP TFAKNR+LEVIHCRW MLGAL
Sbjct: 75  PGDYGWDTAGLSADPATFAKNRKLEVIHCRWTMLGAL 111

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>CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloroplast precursor|
           (LHCII type I CAB-21) (LHCP)
          Length = 265

 Score =  152 bits (385), Expect = 1e-37
 Identities = 75/98 (76%), Positives = 80/98 (81%), Gaps = 1/98 (1%)
 Frame = +3

Query: 99  GKAVKDLPSSA-LFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGE 275
           G+AVK  PS+  + G  RV+MRKT AK  PV    PWYG DRV YLGP SG+ PSYLTGE
Sbjct: 15  GQAVKLSPSAPEITGNGRVSMRKTVAK--PVASSSPWYGPDRVKYLGPFSGESPSYLTGE 72

Query: 276 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 389
           FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL
Sbjct: 73  FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 110

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>CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 262

 Score =  152 bits (383), Expect = 2e-37
 Identities = 69/85 (81%), Positives = 71/85 (83%)
 Frame = +3

Query: 135 FGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLS 314
           FGE R+TMRKT  K K      PWYG DRV YLGP SG+PPSYLTGEFPGDYGWDTAGLS
Sbjct: 23  FGEGRITMRKTVGKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLS 82

Query: 315 ADPETFAKNRELEVIHCRWAMLGAL 389
           ADPETFAKNRELEVIH RWAMLGAL
Sbjct: 83  ADPETFAKNRELEVIHSRWAMLGAL 107

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>CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor|
           (LHCII type I CAB-1B) (LHCP)
          Length = 265

 Score =  151 bits (382), Expect = 3e-37
 Identities = 74/98 (75%), Positives = 79/98 (80%), Gaps = 1/98 (1%)
 Frame = +3

Query: 99  GKAVKDLPS-SALFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGE 275
           G+AVK  PS S + G  R+TMRK  AK+ P     PWYG DRV YLGP SG+ PSYLTGE
Sbjct: 15  GQAVKLSPSASEISGNGRITMRKAVAKSAP--SSSPWYGPDRVKYLGPFSGESPSYLTGE 72

Query: 276 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 389
           FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL
Sbjct: 73  FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 110

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>CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 264

 Score =  149 bits (377), Expect = 1e-36
 Identities = 76/98 (77%), Positives = 82/98 (83%), Gaps = 1/98 (1%)
 Frame = +3

Query: 99  GKAVKDLPSSA-LFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGE 275
           GKAVK+L SS+ + G+ARV+MRKTAA  K      PWYG DRV YLGP SG+ PSYLTGE
Sbjct: 15  GKAVKNLSSSSEVQGDARVSMRKTAATKK---VGSPWYGPDRVKYLGPFSGESPSYLTGE 71

Query: 276 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 389
           FPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGAL
Sbjct: 72  FPGDYGWDTAGLSADPETFAKNRELEVIHGRWAMLGAL 109

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>CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (CAB-140) (LHCP)
          Length = 267

 Score =  149 bits (375), Expect = 2e-36
 Identities = 75/98 (76%), Positives = 79/98 (80%), Gaps = 1/98 (1%)
 Frame = +3

Query: 99  GKAVKDLPS-SALFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGE 275
           GKAVK  P+ S + G  RVTMRKT AK K      PWYGSDRV YLGP SG+ PSYLTGE
Sbjct: 15  GKAVKLSPAASEVLGSGRVTMRKTVAKPKGPSGS-PWYGSDRVKYLGPFSGESPSYLTGE 73

Query: 276 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 389
           FPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGAL
Sbjct: 74  FPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGAL 111

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>CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 member 1B,|
           chloroplast precursor (Chlorophyll a-b binding protein
           type II 1B) (CAB) (LHCP)
          Length = 274

 Score =  149 bits (375), Expect = 2e-36
 Identities = 70/89 (78%), Positives = 73/89 (82%), Gaps = 1/89 (1%)
 Frame = +3

Query: 126 SALFGEARVTMRK-TAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDT 302
           + + GEARVTMRK T  K        PWYG DRVLYLGP SG+PPSYLTGEFPGDYGWDT
Sbjct: 31  AGVHGEARVTMRKATTKKLTASASTSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDT 90

Query: 303 AGLSADPETFAKNRELEVIHCRWAMLGAL 389
           AGLSADPE FAKNRELEVIHCRWAMLGAL
Sbjct: 91  AGLSADPENFAKNRELEVIHCRWAMLGAL 119



 Score = 27.3 bits (59), Expect = 9.1
 Identities = 15/46 (32%), Positives = 24/46 (52%)
 Frame = +3

Query: 240 LSGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAM 377
           ++G P   +T        +D  GL+ DPE FA+ +  E+ + R AM
Sbjct: 185 IAGGPLGEVTDPIYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAM 230

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>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor|
           (Allergen Api g 3)
          Length = 264

 Score =  149 bits (375), Expect = 2e-36
 Identities = 75/98 (76%), Positives = 78/98 (79%), Gaps = 1/98 (1%)
 Frame = +3

Query: 99  GKAVKDLPSSA-LFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGE 275
           GKAVK  PSS+ LFG  RV+MRKT    K      PWYG DRV YLGP SG+ PSYLTGE
Sbjct: 15  GKAVKVAPSSSELFGNGRVSMRKTV---KAPVSDSPWYGPDRVKYLGPFSGEAPSYLTGE 71

Query: 276 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 389
           FPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGAL
Sbjct: 72  FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGAL 109

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>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast|
           precursor (LHCII type I CAB-AB80) (LHCP)
          Length = 269

 Score =  148 bits (374), Expect = 3e-36
 Identities = 71/97 (73%), Positives = 75/97 (77%)
 Frame = +3

Query: 99  GKAVKDLPSSALFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEF 278
           GK +K  PSS   G AR TMRK+A   K      PWYG DRV YLGP SG+ PSYLTGEF
Sbjct: 18  GKQLKLNPSSQELGAARFTMRKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGEF 77

Query: 279 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 389
           PGDYGWDTAGLSADPETF+KNRELEVIH RWAMLGAL
Sbjct: 78  PGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGAL 114

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>CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP) (Fragment)
          Length = 255

 Score =  148 bits (373), Expect = 4e-36
 Identities = 73/98 (74%), Positives = 81/98 (82%), Gaps = 1/98 (1%)
 Frame = +3

Query: 99  GKAVKDLPSSA-LFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGE 275
           G+AVK  P++  + G A+ TMRKTA+K+  V    PWYG DRV YLGP SG+PPSYLTGE
Sbjct: 5   GQAVKLSPNAPEIQGNAKFTMRKTASKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGE 62

Query: 276 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 389
           FPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGAL
Sbjct: 63  FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGAL 100

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>CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP) (Fragment)
          Length = 245

 Score =  147 bits (370), Expect = 8e-36
 Identities = 70/90 (77%), Positives = 74/90 (82%)
 Frame = +3

Query: 120 PSSALFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWD 299
           PS+   G  RV+MRKTA+K   V    PWYG DRV YLGP SG+PPSYLTGEFPGDYGWD
Sbjct: 3   PSTPQLGVGRVSMRKTASKT--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWD 60

Query: 300 TAGLSADPETFAKNRELEVIHCRWAMLGAL 389
           TAGLSADPETFAKNRELEVIH RWAMLGAL
Sbjct: 61  TAGLSADPETFAKNRELEVIHSRWAMLGAL 90

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>CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chloroplast|
           precursor (LHCII type I CAB-165/180)
          Length = 267

 Score =  147 bits (370), Expect = 8e-36
 Identities = 74/98 (75%), Positives = 78/98 (79%), Gaps = 1/98 (1%)
 Frame = +3

Query: 99  GKAVKDLPS-SALFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGE 275
           GKAV   P+ S + G  RVTMRKT AK K      PWYGSDRV YLGP SG+ PSYLTGE
Sbjct: 15  GKAVNLSPAASEVLGSGRVTMRKTVAKPKGPSGS-PWYGSDRVKYLGPFSGESPSYLTGE 73

Query: 276 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 389
           FPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGAL
Sbjct: 74  FPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGAL 111

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>CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 member 1A,|
           chloroplast precursor (Chlorophyll a-b binding protein
           type II 1A) (CAB) (LHCP)
          Length = 278

 Score =  145 bits (367), Expect = 2e-35
 Identities = 69/85 (81%), Positives = 72/85 (84%), Gaps = 1/85 (1%)
 Frame = +3

Query: 138 GEARVTMRK-TAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLS 314
           GEAR+TMRK T  K+       PWYG DRVLYLGP SG+PPSYLTGEFPGDYGWDTAGLS
Sbjct: 39  GEARLTMRKATGKKSVAASIDSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLS 98

Query: 315 ADPETFAKNRELEVIHCRWAMLGAL 389
           ADPETFAKNRELEVIH RWAMLGAL
Sbjct: 99  ADPETFAKNRELEVIHSRWAMLGAL 123

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>CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloroplast precursor|
           (LHCII type I CAB-3) (LHCP)
          Length = 263

 Score =  145 bits (367), Expect = 2e-35
 Identities = 74/97 (76%), Positives = 77/97 (79%)
 Frame = +3

Query: 99  GKAVKDLPSSALFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEF 278
           GKAVK  PS+   G  RV+MRKT  K   V    PWYG DRV YLGP SG+PPSYLTGEF
Sbjct: 16  GKAVKLGPSAPEVG--RVSMRKTVTKQ--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEF 71

Query: 279 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 389
           PGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGAL
Sbjct: 72  PGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGAL 108

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>CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloroplast precursor|
           (LHCII type II CAB-1A) (LHCP)
          Length = 278

 Score =  145 bits (365), Expect = 3e-35
 Identities = 68/85 (80%), Positives = 72/85 (84%), Gaps = 1/85 (1%)
 Frame = +3

Query: 138 GEARVTMRK-TAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLS 314
           GEAR+TMRK T  K+       PWYG DRV+YLGP SG+PPSYLTGEFPGDYGWDTAGLS
Sbjct: 39  GEARLTMRKATGRKSVAASIDSPWYGPDRVMYLGPFSGEPPSYLTGEFPGDYGWDTAGLS 98

Query: 315 ADPETFAKNRELEVIHCRWAMLGAL 389
           ADPETFAKNRELEVIH RWAMLGAL
Sbjct: 99  ADPETFAKNRELEVIHSRWAMLGAL 123

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>CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast precursor|
           (LHCII type I CAB-8)
          Length = 268

 Score =  144 bits (364), Expect = 4e-35
 Identities = 68/90 (75%), Positives = 71/90 (78%)
 Frame = +3

Query: 120 PSSALFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWD 299
           PSS   G AR TMRK+A   K      PWYG DRV YLGP SG+ PSYLTGEFPGDYGWD
Sbjct: 24  PSSQELGGARFTMRKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWD 83

Query: 300 TAGLSADPETFAKNRELEVIHCRWAMLGAL 389
           TAGLSADPETF+KNRELEVIH RWAMLGAL
Sbjct: 84  TAGLSADPETFSKNRELEVIHSRWAMLGAL 113

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>CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 member F3,|
           chloroplast precursor (DE Chlorophyll a-b binding
           protein type I F3) (CAB-F3) (LHCP)
          Length = 265

 Score =  135 bits (340), Expect = 2e-32
 Identities = 68/96 (70%), Positives = 71/96 (73%)
 Frame = +3

Query: 102 KAVKDLPSSALFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFP 281
           K V +L      GEARV M    +KA        WYGSDR LYLGP SG PPSYL+GEFP
Sbjct: 18  KPVNELSRKVGAGEARVQMMAPKSKAP---SGSIWYGSDRPLYLGPFSGSPPSYLSGEFP 74

Query: 282 GDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 389
           GDYGWDTAGLSADPETFAKNRELEVIH RWAMLGAL
Sbjct: 75  GDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGAL 110

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>CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloroplast precursor|
           (LHCII type I CAB-4) (LHCP)
          Length = 265

 Score =  133 bits (334), Expect = 1e-31
 Identities = 63/85 (74%), Positives = 66/85 (77%)
 Frame = +3

Query: 135 FGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLS 314
           FGE R+TMR+T   A        WYG DR  YLGP S   PSYLTGEFPGDYGWDTAGLS
Sbjct: 30  FGEGRITMRRTVKSAPQSI----WYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLS 85

Query: 315 ADPETFAKNRELEVIHCRWAMLGAL 389
           ADPETFA+NRELEVIHCRWAMLGAL
Sbjct: 86  ADPETFARNRELEVIHCRWAMLGAL 110

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>CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloroplast precursor|
           (LHCII type I CAB-37) (LHCP)
          Length = 265

 Score =  129 bits (324), Expect = 2e-30
 Identities = 62/85 (72%), Positives = 64/85 (75%)
 Frame = +3

Query: 135 FGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLS 314
           FG  R TMR+T   A        WYG DR  YLGP S   PSYLTGEFPGDYGWDTAGLS
Sbjct: 30  FGGGRATMRRTVKSAPQSI----WYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLS 85

Query: 315 ADPETFAKNRELEVIHCRWAMLGAL 389
           ADPETFA+NRELEVIHCRWAMLGAL
Sbjct: 86  ADPETFARNRELEVIHCRWAMLGAL 110

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>CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chloroplast precursor|
           (LHCII type II CAB-151) (LHCP)
          Length = 265

 Score =  128 bits (321), Expect = 4e-30
 Identities = 63/84 (75%), Positives = 66/84 (78%)
 Frame = +3

Query: 138 GEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLSA 317
           G  RV+MR+T  K+ P      WYG DR  YLGP S   PSYLTGEFPGDYGWDTAGLSA
Sbjct: 31  GGGRVSMRRTV-KSAPTSI---WYGPDRPKYLGPFSDQIPSYLTGEFPGDYGWDTAGLSA 86

Query: 318 DPETFAKNRELEVIHCRWAMLGAL 389
           DPETFAKNRELEVIHCRWAMLGAL
Sbjct: 87  DPETFAKNRELEVIHCRWAMLGAL 110

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>CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloroplast precursor|
           (LHCII type I CAB-5) (LHCP) (Fragment)
          Length = 237

 Score =  127 bits (320), Expect = 5e-30
 Identities = 62/85 (72%), Positives = 64/85 (75%)
 Frame = +3

Query: 135 FGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLS 314
           F   RVTMR+T   A        WYG DR  YLGP S   PSYLTGEFPGDYGWDTAGLS
Sbjct: 2   FEGGRVTMRRTVKSAPQSI----WYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLS 57

Query: 315 ADPETFAKNRELEVIHCRWAMLGAL 389
           ADPETFA+NRELEVIHCRWAMLGAL
Sbjct: 58  ADPETFARNRELEVIHCRWAMLGAL 82

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>CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloroplast precursor|
           (LHCII type I CAB-36) (LHCP)
          Length = 265

 Score =  127 bits (318), Expect = 8e-30
 Identities = 61/85 (71%), Positives = 63/85 (74%)
 Frame = +3

Query: 135 FGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLS 314
           F   R TMR+T   A        WYG DR  YLGP S   PSYLTGEFPGDYGWDTAGLS
Sbjct: 30  FNGGRATMRRTVKSAPQSI----WYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLS 85

Query: 315 ADPETFAKNRELEVIHCRWAMLGAL 389
           ADPETFA+NRELEVIHCRWAMLGAL
Sbjct: 86  ADPETFARNRELEVIHCRWAMLGAL 110

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>CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloroplast precursor|
           (LHCII type II CAB-215) (LHCP)
          Length = 265

 Score =  127 bits (318), Expect = 8e-30
 Identities = 62/85 (72%), Positives = 65/85 (76%)
 Frame = +3

Query: 135 FGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLS 314
           FG+AR TMR+T   A        WYG DR  YLGP S   PSYLTGEFPGDYGWDTAGLS
Sbjct: 30  FGQARFTMRRTVKSAPESI----WYGPDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLS 85

Query: 315 ADPETFAKNRELEVIHCRWAMLGAL 389
           ADPETFA+NRELEVIH RWAMLGAL
Sbjct: 86  ADPETFARNRELEVIHSRWAMLGAL 110

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>CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 269

 Score =  126 bits (316), Expect = 1e-29
 Identities = 63/97 (64%), Positives = 72/97 (74%), Gaps = 1/97 (1%)
 Frame = +3

Query: 102 KAVKDLPSSALFG-EARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEF 278
           K V +L    L   EARVTMR+T +K+        WYG+DR  +LGP SG+ PSYL GEF
Sbjct: 19  KPVNELSRKVLGNVEARVTMRRTVSKS--AGSDTIWYGADRPKFLGPFSGETPSYLNGEF 76

Query: 279 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 389
            GDYGWDTAGLS+DPETFA+NRELEVIH RWAMLGAL
Sbjct: 77  AGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGAL 113



 Score = 27.3 bits (59), Expect = 9.1
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = +3

Query: 240 LSGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAM 377
           ++G P   +T        +D  GL+ DP+TFA+ +  E+ + R AM
Sbjct: 179 VAGGPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAM 224

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>CB21_SILPR (P12332) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP) (Fragment)
          Length = 205

 Score =  125 bits (315), Expect = 2e-29
 Identities = 61/81 (75%), Positives = 63/81 (77%)
 Frame = +3

Query: 147 RVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLSADPE 326
           RV+MR+T   A        WYG DR  YLGP S   PSYLTGEFPGDYGWDTAGLSADPE
Sbjct: 33  RVSMRRTIKSAPESI----WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE 88

Query: 327 TFAKNRELEVIHCRWAMLGAL 389
           TFAKNRELEVIHCRWAMLGAL
Sbjct: 89  TFAKNRELEVIHCRWAMLGAL 109

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>CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chloroplast|
           precursor (CAB) (LHCP)
          Length = 266

 Score =  125 bits (315), Expect = 2e-29
 Identities = 60/83 (72%), Positives = 64/83 (77%)
 Frame = +3

Query: 141 EARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLSAD 320
           +AR+TMR+T   A        WYG DR  YLGP S   PSYLTGEFPGDYGWDTA +SAD
Sbjct: 33  QARITMRRTVRSAPESI----WYGPDRPKYLGPFSEGTPSYLTGEFPGDYGWDTAAVSAD 88

Query: 321 PETFAKNRELEVIHCRWAMLGAL 389
           PETFAKNRELEVIHCRWAMLGAL
Sbjct: 89  PETFAKNRELEVIHCRWAMLGAL 111

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>CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII type I|
           CAB-AB96) (LHCP) (Major 15) (Fragment)
          Length = 228

 Score =  124 bits (310), Expect = 7e-29
 Identities = 56/70 (80%), Positives = 58/70 (82%)
 Frame = +3

Query: 180 KPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 359
           K      PW+G D V YLGP SG+ PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI
Sbjct: 4   KVASSSSPWHGPDGVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 63

Query: 360 HCRWAMLGAL 389
           H RWAMLGAL
Sbjct: 64  HSRWAMLGAL 73

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>CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 263

 Score =  122 bits (306), Expect = 2e-28
 Identities = 59/81 (72%), Positives = 62/81 (76%)
 Frame = +3

Query: 147 RVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLSADPE 326
           R+TMR+T   A        WYG DR  YLGP S   PSYLTGEFPGDYGWDTAGLSADPE
Sbjct: 32  RITMRRTVKSAPQSI----WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE 87

Query: 327 TFAKNRELEVIHCRWAMLGAL 389
           TFA+NRELEVIH RWAMLGAL
Sbjct: 88  TFARNRELEVIHSRWAMLGAL 108

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>CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 264

 Score =  121 bits (303), Expect = 5e-28
 Identities = 60/83 (72%), Positives = 65/83 (78%)
 Frame = +3

Query: 141 EARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLSAD 320
           + R +MR+T  KA P      WYG+DR  +LGP S   PSYLTGEFPGDYGWDTAGLSAD
Sbjct: 31  DGRFSMRRTV-KAVPQSI---WYGADRPKFLGPFSEQTPSYLTGEFPGDYGWDTAGLSAD 86

Query: 321 PETFAKNRELEVIHCRWAMLGAL 389
           PETFAKNRELEVIH RWAMLGAL
Sbjct: 87  PETFAKNRELEVIHSRWAMLGAL 109

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>CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 256

 Score =  117 bits (292), Expect = 9e-27
 Identities = 63/97 (64%), Positives = 68/97 (70%)
 Frame = +3

Query: 99  GKAVKDLPSSALFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEF 278
           G+A+K  PS+   G  RV+MRKTA K   V    PWYG DRV YLGP SG+ PSYLTGEF
Sbjct: 15  GQAMKLAPSTPELGVGRVSMRKTAPKT--VSSGSPWYGPDRVKYLGPFSGEAPSYLTGEF 72

Query: 279 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 389
            G        LSADPETFAKNRELEVIH RWAMLGAL
Sbjct: 73  HG--------LSADPETFAKNRELEVIHSRWAMLGAL 101

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>CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloroplast precursor|
           (LHCII type III CAB-13)
          Length = 265

 Score =  114 bits (286), Expect = 4e-26
 Identities = 52/62 (83%), Positives = 52/62 (83%)
 Frame = +3

Query: 204 WYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG 383
           WYG DRV YLGP S   PSYL GEFPGDYGWDTAGLSADPE FAKNR LEVIH RWAMLG
Sbjct: 47  WYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLG 106

Query: 384 AL 389
           AL
Sbjct: 107 AL 108



 Score = 28.9 bits (63), Expect = 3.1
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = +3

Query: 276 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAM 377
           +PG   +D  GL+ DP TFA+ +  E+ + R AM
Sbjct: 188 YPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAM 221

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>CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII type III,|
           chloroplast precursor (CAB)
          Length = 268

 Score =  113 bits (283), Expect = 1e-25
 Identities = 51/62 (82%), Positives = 52/62 (83%)
 Frame = +3

Query: 204 WYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG 383
           WYG DRV YLGP S   PSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLG
Sbjct: 50  WYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLG 109

Query: 384 AL 389
           AL
Sbjct: 110 AL 111



 Score = 28.5 bits (62), Expect = 4.1
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = +3

Query: 276 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAM 377
           +PG   +D  GL+ DP TFA+ +  E+ + R AM
Sbjct: 191 YPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAM 224

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>CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 256

 Score =  112 bits (280), Expect = 2e-25
 Identities = 55/83 (66%), Positives = 61/83 (73%)
 Frame = +3

Query: 141 EARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLSAD 320
           +A  T +  AA AK       WYG DR  +LGP S + P+YLTGEFPGDYGWDTAGLSAD
Sbjct: 20  KAAGTKQTKAAPAK--SAGIEWYGPDRAKWLGPFSTNTPAYLTGEFPGDYGWDTAGLSAD 77

Query: 321 PETFAKNRELEVIHCRWAMLGAL 389
           PETF K RELEVIH RWA+LGAL
Sbjct: 78  PETFKKYRELEVIHARWALLGAL 100



 Score = 28.1 bits (61), Expect = 5.3
 Identities = 14/34 (41%), Positives = 23/34 (67%)
 Frame = +3

Query: 276 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAM 377
           +PG+  +D  GL+ DP+TFA+ +  E+ + R AM
Sbjct: 180 YPGE-SFDPLGLADDPDTFAELKVKEIKNGRLAM 212

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>CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 253

 Score =  107 bits (268), Expect = 5e-24
 Identities = 56/89 (62%), Positives = 65/89 (73%), Gaps = 2/89 (2%)
 Frame = +3

Query: 129 ALFGEARVTMRKTAAKAK-PVXXXXPWYGSDRVLYLGPLSGDP-PSYLTGEFPGDYGWDT 302
           AL    + T +KTAAKA  P      +YG +R  +LGP S +  P+YLTGEFPGDYGWDT
Sbjct: 10  ALQVTCKATGKKTAAKAAAPKSSGVEFYGPNRAKWLGPYSENATPAYLTGEFPGDYGWDT 69

Query: 303 AGLSADPETFAKNRELEVIHCRWAMLGAL 389
           AGLSADPETF + RELE+IH RWAMLGAL
Sbjct: 70  AGLSADPETFKRYRELELIHARWAMLGAL 98

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>CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chloroplast|
           precursor (LHCII type I CAB-AB10) (LHCP)
          Length = 268

 Score =  105 bits (262), Expect = 3e-23
 Identities = 59/89 (66%), Positives = 61/89 (68%)
 Frame = +3

Query: 123 SSALFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDT 302
           SS L   A  TM K AAK+K            RV YLGP SG+ PSYLTGEFPGDYGWDT
Sbjct: 30  SSTLIVTAGFTMLKHAAKSKVSSSTC----DRRVKYLGPFSGEWPSYLTGEFPGDYGWDT 85

Query: 303 AGLSADPETFAKNRELEVIHCRWAMLGAL 389
           AGLSA PETFAKNRELEVIH R AM  AL
Sbjct: 86  AGLSAYPETFAKNRELEVIHSRCAMSAAL 114

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>CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII type 1|
           (Chlorophyll a-b binding protein of LHCII type I) (CAB)
           (LHCP) (Fragment)
          Length = 206

 Score =  105 bits (261), Expect = 3e-23
 Identities = 47/51 (92%), Positives = 48/51 (94%)
 Frame = +3

Query: 237 PLSGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 389
           P SG+PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH  WAMLGAL
Sbjct: 1   PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSTWAMLGAL 51

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>CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 253

 Score =  102 bits (255), Expect = 2e-22
 Identities = 46/63 (73%), Positives = 53/63 (84%), Gaps = 1/63 (1%)
 Frame = +3

Query: 204 WYGSDRVLYLGPLS-GDPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 380
           +YG DR  +LGP S  D P YLTGEFPGDYGWDTAGLSADP+TFA+ RE+E+IH RWA+L
Sbjct: 33  FYGPDRAKFLGPFSENDTPEYLTGEFPGDYGWDTAGLSADPQTFARYREIELIHARWALL 92

Query: 381 GAL 389
           GAL
Sbjct: 93  GAL 95



 Score = 27.7 bits (60), Expect = 6.9
 Identities = 15/38 (39%), Positives = 23/38 (60%)
 Frame = +3

Query: 276 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 389
           +PG   +D  GL+ DP+TFA+ +  E+ + R AM   L
Sbjct: 177 YPGG-PFDPLGLADDPDTFAELKVKEIKNGRLAMFSCL 213

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>CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 273

 Score = 76.6 bits (187), Expect = 1e-14
 Identities = 41/79 (51%), Positives = 47/79 (59%)
 Frame = +3

Query: 153 TMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLSADPETF 332
           T +   A +K       +YG D       L    P   TGEFPGDYGWDTAGLSADPETF
Sbjct: 40  TKKGAKAVSKSSSSANQFYGPDATSGWD-LQHQHPRLPTGEFPGDYGWDTAGLSADPETF 98

Query: 333 AKNRELEVIHCRWAMLGAL 389
            + RELE+IH R  +LGAL
Sbjct: 99  KRYRELELIHARCGLLGAL 117



 Score = 29.6 bits (65), Expect = 1.8
 Identities = 15/38 (39%), Positives = 24/38 (63%)
 Frame = +3

Query: 276 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 389
           +PG+  +D  GL+ DP+TFA+ +  E+ + R AM   L
Sbjct: 198 YPGE-AFDPLGLADDPDTFAELKVKEIKNGRLAMFACL 234

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>CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloroplast|
           precursor (Light-harvesting complex II protein 5)
           (LHCB5) (LHCIIc)
          Length = 280

 Score = 74.3 bits (181), Expect = 6e-14
 Identities = 40/89 (44%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
 Frame = +3

Query: 129 ALFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYL--GPLS-GDPPSYLTGEFPGDYGWD 299
           ALF + +    K+ A ++       WYG DR ++L  G L   + P YL GE  GDYG+D
Sbjct: 37  ALFSKKKPAPAKSKAVSETSDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVAGDYGYD 96

Query: 300 TAGLSADPETFAKNRELEVIHCRWAMLGA 386
             GL   PE FAK +  E+IH RWAMLGA
Sbjct: 97  PFGLGKKPENFAKYQAFELIHARWAMLGA 125

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>CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloroplast precursor|
           (LHCI type II CAB-7)
          Length = 270

 Score = 66.2 bits (160), Expect = 2e-11
 Identities = 37/97 (38%), Positives = 51/97 (52%), Gaps = 1/97 (1%)
 Frame = +3

Query: 99  GKAVKDLPSSALFGEA-RVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGE 275
           G  V    +S L G   RV+   T   A+           DR L+       PP +L G 
Sbjct: 24  GSIVGTTKASFLGGRRLRVSKYSTTPTARSATTVCVAADPDRPLWFP--GSTPPPWLDGS 81

Query: 276 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGA 386
            PGD+G+D  GL++DPE+   N++ E++HCRWAMLGA
Sbjct: 82  LPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGA 118

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>CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCI type II CAB)
          Length = 270

 Score = 60.5 bits (145), Expect = 1e-09
 Identities = 24/45 (53%), Positives = 32/45 (71%)
 Frame = +3

Query: 252 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGA 386
           PP +L G  PGD+G+D  GL +DPE+   N + E++H RWAMLGA
Sbjct: 74  PPEWLDGSLPGDFGFDPLGLGSDPESLKWNAQAELVHSRWAMLGA 118

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>LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins precursor|
           [Contains: LH38 protein 1; LH38 protein 2; LH38 protein
           3] (Fragment)
          Length = 530

 Score = 56.2 bits (134), Expect = 2e-08
 Identities = 26/43 (60%), Positives = 31/43 (72%)
 Frame = +3

Query: 252 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 380
           PP YLTGE  GD G+D AGL+ADP TF + +  EV HCR +ML
Sbjct: 380 PPRYLTGEAYGDKGFDPAGLAADPVTFERMQVAEVFHCRLSML 422



 Score = 52.8 bits (125), Expect = 2e-07
 Identities = 23/46 (50%), Positives = 32/46 (69%)
 Frame = +3

Query: 243 SGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 380
           + +PP+ LTGE+P D G+D   L+ADP+ +A+ R  EV H R AML
Sbjct: 193 NAEPPALLTGEYPADRGFDPLNLAADPDVYARMRVAEVFHGRLAML 238



 Score = 52.8 bits (125), Expect = 2e-07
 Identities = 25/45 (55%), Positives = 32/45 (71%)
 Frame = +3

Query: 255 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 389
           PS+L GE+ GD G+D AGL+ADP+TF + R  EV H R AML  +
Sbjct: 12  PSWLNGEYYGDRGFDPAGLAADPDTFERMRIAEVYHGRLAMLAVV 56

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>CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloroplast precursor|
           (LHCI type I CAB-6A) (Light-harvesting complex I 26 kDa
           protein)
          Length = 246

 Score = 56.2 bits (134), Expect = 2e-08
 Identities = 25/48 (52%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
 Frame = +3

Query: 240 LSGDP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 380
           + G P PSYL G  PGD+G+D+ GL   P    + +E E+IHCRWAML
Sbjct: 50  MPGQPRPSYLDGSAPGDFGFDSLGLGEVPANLERYKESELIHCRWAML 97

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>CB4_SPIOL (P36494) Chlorophyll a-b binding protein CP24, chloroplast|
           precursor
          Length = 261

 Score = 51.2 bits (121), Expect = 6e-07
 Identities = 23/45 (51%), Positives = 27/45 (60%)
 Frame = +3

Query: 255 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 389
           P +L G  PGD+G+D  GL  DP      RE E+IH RWAML  L
Sbjct: 73  PEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMLAVL 117

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>CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, chloroplast|
           precursor (CAB-10A) (LHCP)
          Length = 256

 Score = 50.8 bits (120), Expect = 8e-07
 Identities = 23/45 (51%), Positives = 26/45 (57%)
 Frame = +3

Query: 255 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 389
           P +L G  PGDYG+D  GL  DP      RE E+IH RWAM   L
Sbjct: 68  PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVL 112

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>LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins precursor|
           [Contains: LH35 protein 1; LH35 protein 2] (Fragment)
          Length = 331

 Score = 50.1 bits (118), Expect = 1e-06
 Identities = 21/43 (48%), Positives = 30/43 (69%)
 Frame = +3

Query: 252 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 380
           PP++LTGE+P D G+D   ++ADP  +A+ R  EV H R +ML
Sbjct: 168 PPAHLTGEYPADRGFDPLSVAADPTVYARMRVSEVFHARLSML 210

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>CB4B_LYCES (P27525) Chlorophyll a-b binding protein CP24 10B, chloroplast|
           precursor (CAB-10B) (LHCP)
          Length = 256

 Score = 49.3 bits (116), Expect = 2e-06
 Identities = 22/45 (48%), Positives = 26/45 (57%)
 Frame = +3

Query: 255 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 389
           P +L G  PGD+G+D  GL  DP      RE E+IH RWAM   L
Sbjct: 68  PEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVL 112

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>CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloroplast precursor|
           (LHCI type III CAB-4) (LHCP)
          Length = 251

 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 21/43 (48%), Positives = 27/43 (62%)
 Frame = +3

Query: 255 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG 383
           P YLTG   GD G+D  GL+ DPE      + E+++ RWAMLG
Sbjct: 64  PDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLG 106

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>CB2F_LYCES (P14277) Chlorophyll a-b binding protein 3B, chloroplast precursor|
           (LHCII type I CAB-3B) (LHCP) (Fragments)
          Length = 267

 Score = 43.9 bits (102), Expect = 9e-05
 Identities = 22/37 (59%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
 Frame = +3

Query: 99  GKAVKDLPSSA-LFGEARVTMRKTAAKAKPVXXXXPW 206
           GKAVK  PSS+ + G  R+TMRKTAAK KP     PW
Sbjct: 15  GKAVKLSPSSSEISGNGRITMRKTAAKPKPASSGSPW 51

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>CB2E_LYCES (P14276) Chlorophyll a-b binding protein 3A, chloroplast precursor|
           (LHCII type I CAB-3A) (LHCP) (Fragments)
          Length = 267

 Score = 42.7 bits (99), Expect = 2e-04
 Identities = 21/37 (56%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
 Frame = +3

Query: 99  GKAVKDLPSSA-LFGEARVTMRKTAAKAKPVXXXXPW 206
           GK VK  PSS+ + G  R+TMRKTAAK KP     PW
Sbjct: 15  GKTVKLAPSSSEITGNGRITMRKTAAKPKPASSGSPW 51

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>CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloroplast precursor|
           (LHCI type III CAB-8)
          Length = 273

 Score = 40.0 bits (92), Expect = 0.001
 Identities = 30/65 (46%), Positives = 39/65 (60%), Gaps = 6/65 (9%)
 Frame = +3

Query: 210 GSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLSADPE---TFAKNREL---EVIHCRW 371
           G++R L+    S    SYL G  PGD+G+D  GLS DPE    F + + L   EVI+ R+
Sbjct: 50  GANRQLWFA--SKQSLSYLDGRLPGDFGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRF 106

Query: 372 AMLGA 386
           AMLGA
Sbjct: 107 AMLGA 111

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>FCP_ISOGA (Q39709) Fucoxanthin-chlorophyll a-c binding protein, chloroplast|
           precursor (FCP)
          Length = 208

 Score = 34.7 bits (78), Expect = 0.057
 Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
 Frame = +3

Query: 231 LGPLSGDPPSYLT-GEFPGDYGWDTAGLS-ADPETFAKNRELEVIHCRWAMLGA 386
           + P +G   S L  G  PGD G+D  GL+ +DP+ F   +E E+ H R AM+ A
Sbjct: 132 VNPETGKADSALREGYEPGDLGFDPLGLAPSDPDEFRLMQEKELSHGRLAMIAA 185

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>CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chloroplast|
           precursor (LHCII protein 4.2) (LHCB4.2)
          Length = 287

 Score = 34.3 bits (77), Expect = 0.074
 Identities = 40/142 (28%), Positives = 49/142 (34%), Gaps = 46/142 (32%)
 Frame = +3

Query: 102 KAVKDLPSSALFGEARV---TMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTG 272
           + V D+ S++    AR    T + +  KAK V        SDR L+        P YL G
Sbjct: 17  RVVSDISSNSSRFTARFGFGTKKASPKKAKTVI-------SDRPLWFP--GAKSPEYLDG 67

Query: 273 EFPGDYGWDTAGLSADPE-----------TFAKN-------------------------- 341
              GDYG+D  GL    E             AKN                          
Sbjct: 68  SLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNLYGEVIGTRTEAVDPKSTPFQPYSEV 127

Query: 342 ------RELEVIHCRWAMLGAL 389
                 RE E+IH RWAML  L
Sbjct: 128 FGLQRFRECELIHGRWAMLATL 149



 Score = 30.4 bits (67), Expect = 1.1
 Identities = 15/38 (39%), Positives = 23/38 (60%)
 Frame = +3

Query: 276 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 389
           +PG   +D  GL++DP   A+ +  E+ H R AM+G L
Sbjct: 214 YPGGKFFDPLGLASDPVKKAQLQLAEIKHARLAMVGFL 251

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>CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chloroplast|
           precursor (LHCII protein 4.1) (LHCB4.1)
          Length = 290

 Score = 32.3 bits (72), Expect = 0.28
 Identities = 16/38 (42%), Positives = 23/38 (60%)
 Frame = +3

Query: 276 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 389
           +PG   +D  GL+ADPE  A+ +  E+ H R AM+  L
Sbjct: 217 YPGGKFFDPLGLAADPEKTAQLQLAEIKHARLAMVAFL 254



 Score = 32.3 bits (72), Expect = 0.28
 Identities = 34/116 (29%), Positives = 39/116 (33%), Gaps = 44/116 (37%)
 Frame = +3

Query: 174 KAKPVXXXXPWYGSDRVL-YLGPLSGDPPSYLTGEFPGDYGWDTAGLSADPE-------- 326
           KA P         +DR L Y G +S   P +L G   GDYG+D  GL    E        
Sbjct: 40  KAAPKKSAKKTVTTDRPLWYPGAIS---PDWLDGSLVGDYGFDPFGLGKPAEYLQFDIDS 96

Query: 327 ---TFAKN--------------------------------RELEVIHCRWAMLGAL 389
                AKN                                RE E+IH RWAML  L
Sbjct: 97  LDQNLAKNLAGDVIGTRTEAADAKSTPFQPYSEVFGIQRFRECELIHGRWAMLATL 152

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>CB2C_LYCES (P14275) Chlorophyll a-b binding protein 1C, chloroplast precursor|
           (LHCII type I CAB-1C) (LHCP) (Fragments)
          Length = 265

 Score = 32.0 bits (71), Expect = 0.37
 Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = +3

Query: 99  GKAVKDLPS-SALFGEARVTMRKTAAKAKPVXXXXPW 206
           G+AVK  PS S + G  R+TMRK  AK+ P     PW
Sbjct: 15  GQAVKLSPSASEISGNGRITMRKAVAKSAP--SSSPW 49

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>SHC1_HUMAN (P29353) SHC transforming protein 1 (SH2 domain protein C1) (Src|
           homology 2 domain-containing transforming protein C1)
          Length = 583

 Score = 31.2 bits (69), Expect = 0.63
 Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
 Frame = +1

Query: 205 GTAPTACSTSARSPATPR---AT*PVSFPVTTDGTLRGSLPTPRPLP 336
           G AP A   +A +  TP    AT PV  PV  D  +R  +P P P P
Sbjct: 371 GAAPGAARPTAPNAQTPSHLGATLPVGQPVGGDPEVRKQMPPPPPCP 417

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>DOCK5_HUMAN (Q9H7D0) Dedicator of cytokinesis protein 5 (Fragment)|
          Length = 804

 Score = 30.8 bits (68), Expect = 0.82
 Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
 Frame = +1

Query: 205 GTAPTACSTSARSPATPRAT*PVSFP-VTTDGTLRGSLPTPRP---LPRTGSWR*STAGG 372
           G++P   +  +  P TP+AT  +S P + TDG     +P P P    P  GS R ST   
Sbjct: 713 GSSPPQSTPLSPPPLTPKATRTLSSPSLQTDGIAATPVPPPPPPKSKPYEGSQRNSTELA 772

Query: 373 P 375
           P
Sbjct: 773 P 773

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>CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chloroplast|
           precursor (LHCII protein 4.3) (LHCB4.3)
          Length = 276

 Score = 30.8 bits (68), Expect = 0.82
 Identities = 26/90 (28%), Positives = 30/90 (33%), Gaps = 43/90 (47%)
 Frame = +3

Query: 249 DPPSYLTGEFPGDYGWDTAGLSADPE-----------TFAKN------------------ 341
           +PP +L G   GD G+D  GL    E             AKN                  
Sbjct: 64  NPPEWLDGSMIGDRGFDPFGLGKPAEYLQYDFDGLDQNLAKNVAGDIIGIIQESSEIKPT 123

Query: 342 --------------RELEVIHCRWAMLGAL 389
                         RE E+IH RWAMLG L
Sbjct: 124 PFQPYTEVFGIQRFRECELIHGRWAMLGTL 153



 Score = 30.0 bits (66), Expect = 1.4
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = +3

Query: 276 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 389
           +PG Y +D  GL+ADPE     +  E+ H R AM+  L
Sbjct: 218 YPGGY-FDPLGLAADPEKLDTLKLAEIKHSRLAMVAFL 254

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>GLNA_MACFA (Q4R7U3) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 373

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 1/78 (1%)
 Frame = +3

Query: 138 GEARVTMRKTAAKAKP-VXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLS 314
           G A   +R T  +    V    PW+G ++   L    G P  + +  FPG  G    G+ 
Sbjct: 107 GPAETNLRHTCKRIMDMVSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVG 166

Query: 315 ADPETFAKNRELEVIHCR 368
           AD    A  R++   H R
Sbjct: 167 ADR---AYGRDIVEAHYR 181

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>CB2A_LYCES (P14274) Chlorophyll a-b binding protein 1A, chloroplast precursor|
           (LHCII type I CAB-1A) (LHCP) (Fragments)
          Length = 265

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 18/37 (48%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = +3

Query: 99  GKAVKDLPS-SALFGEARVTMRKTAAKAKPVXXXXPW 206
           G+AVK  PS S   G  R+TMRK  AK+ P     PW
Sbjct: 15  GQAVKLSPSASENSGNGRITMRKAVAKSAP--SSSPW 49

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>GLNA_XENLA (P51121) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase)
          Length = 392

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
 Frame = +3

Query: 144 ARVTMRKTAAKA-KPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLSAD 320
           A   +R T  K  + V    PW+G ++   L  ++G P  +    FPG  G    G+ AD
Sbjct: 109 AETNLRHTCKKIMEMVNDHRPWFGMEQEYTLLGINGHPYGWPENGFPGPQGPYYCGVGAD 168

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>CB29_CHLRE (Q93WD2) Chlorophyll a-b binding protein CP29|
          Length = 279

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 26/90 (28%), Positives = 29/90 (32%), Gaps = 45/90 (50%)
 Frame = +3

Query: 255 PSYLTGEFPGDYGWDTAGLSADPE-----------TFAKN-------------------- 341
           P +L G  PGD G+D  GLS   E             AKN                    
Sbjct: 59  PEWLDGSLPGDRGFDPLGLSKPSEFVVIGVDENDQNAAKNNKGSVEAIVQATPDEVSSEN 118

Query: 342 --------------RELEVIHCRWAMLGAL 389
                         RE E+IH RWAML  L
Sbjct: 119 RLAPYSEVFGLARFRECELIHGRWAMLACL 148

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>NCOR2_MOUSE (Q9WU42) Nuclear receptor corepressor 2 (N-CoR2) (Silencing mediator|
            of retinoic acid and thyroid hormone receptor) (SMRT)
            (SMRTe) (Thyroid-, retinoic-acid-receptor-associated
            corepressor) (T3 receptor-associating factor) (TRAC)
          Length = 2472

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 20/46 (43%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
 Frame = +1

Query: 220  ACSTSARSPATPRAT*PVSFPVTTDGTLRGSLPT---PRPLPRTGS 348
            A STS  SP  P AT P +      GTL G  PT   P  LP+  S
Sbjct: 1856 ARSTSTSSPVRPAATFPPATHCPLGGTLEGVYPTLMEPVLLPKETS 1901

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>SYNJ2_RAT (O55207) Synaptojanin-2 (EC 3.1.3.36) (Synaptic|
            inositol-1,4,5-trisphosphate 5-phosphatase 2)
          Length = 1496

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
 Frame = -2

Query: 388  SAPSMAHRQWITSSSRFLAKVSGSAESPAVSHP*SPGNSPVK*LGG----SPES-GPR 230
            SAP+  H Q + S+S+ L  ++ S+ SP+   P +P   P   LG     SPE+ GPR
Sbjct: 1347 SAPAAFHLQVLQSNSQLLQGLTCSSSSPSPPKPDTPLLYPQMALGTSSAISPETDGPR 1404

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>GLNA_RAT (P09606) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 372

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 18/61 (29%), Positives = 26/61 (42%)
 Frame = +3

Query: 186 VXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHC 365
           V    PW+G ++   L    G P  + +  FPG  G    G+ AD    A  R++   H 
Sbjct: 123 VSSQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADK---AYGRDIVEAHY 179

Query: 366 R 368
           R
Sbjct: 180 R 180

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>GLNA_PIG (P46410) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 372

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 1/76 (1%)
 Frame = +3

Query: 144 ARVTMRKTAAKAKP-VXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLSAD 320
           A   +R T  +    V    PW+G ++   L    G P  + +  FPG  G    G+ AD
Sbjct: 108 AETNLRHTCKRIMDMVSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGAD 167

Query: 321 PETFAKNRELEVIHCR 368
               A  R++   H R
Sbjct: 168 K---AYGRDIVEAHYR 180

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>GLNA_CRIGR (P04773) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 372

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 1/76 (1%)
 Frame = +3

Query: 144 ARVTMRKTAAKAKP-VXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLSAD 320
           A   +R T  +    V    PW+G ++   L    G P  + +  FPG  G    G+ AD
Sbjct: 108 AETNLRHTCKRIMDMVSNQHPWFGMEQEYTLLGTDGHPFGWPSDGFPGPQGLYYCGVGAD 167

Query: 321 PETFAKNRELEVIHCR 368
               A  R++   H R
Sbjct: 168 K---AYRRDIMEAHYR 180

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>GLNA_CANFA (Q8HZM5) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 372

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 1/76 (1%)
 Frame = +3

Query: 144 ARVTMRKTAAKAKP-VXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLSAD 320
           A   +R T  +    V    PW+G ++   L    G P  + +  FPG  G    G+ AD
Sbjct: 108 AETNLRHTCKRIMDMVSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGAD 167

Query: 321 PETFAKNRELEVIHCR 368
               A  R++   H R
Sbjct: 168 K---AYGRDIVEAHYR 180

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>S2A4R_HUMAN (Q9NR83) SLC2A4 regulator (GLUT4 enhancer factor) (GEF) (Huntington|
           disease gene regulatory region-binding protein 1)
           (HDBP-1)
          Length = 387

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 21/79 (26%), Positives = 27/79 (34%), Gaps = 4/79 (5%)
 Frame = +3

Query: 105 AVKDLPSSALFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGP----LSGDPPSYLTG 272
           A +  P  A   E       T+    P+    P         L P    L   P SY + 
Sbjct: 92  AQRATPGKARLDEVMAAAALTSLSTSPLLLGAPVAAFSPEPGLEPWKEALVRPPGSYSSS 151

Query: 273 EFPGDYGWDTAGLSADPET 329
              GD+GWD A   + P T
Sbjct: 152 SNSGDWGWDLASDQSSPST 170

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>MUC1_YEAST (P08640) Mucin-like protein 1 precursor|
          Length = 1367

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
 Frame = +1

Query: 208 TAPTACST--SARSPATPRAT*PVSFPVTTDGTLRGSLPTPRPLPRT 342
           +AP   ST  S+ +P T   T   S PVT+  T   S P P P   T
Sbjct: 419 SAPVTSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAPVPTPSSST 465



 Score = 27.3 bits (59), Expect = 9.1
 Identities = 15/45 (33%), Positives = 21/45 (46%)
 Frame = +1

Query: 208 TAPTACSTSARSPATPRAT*PVSFPVTTDGTLRGSLPTPRPLPRT 342
           T  ++ + S+ +P T   T   S PVT+  T   S P P P   T
Sbjct: 670 TPSSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAPVPTPSSST 714



 Score = 27.3 bits (59), Expect = 9.1
 Identities = 15/45 (33%), Positives = 21/45 (46%)
 Frame = +1

Query: 208 TAPTACSTSARSPATPRAT*PVSFPVTTDGTLRGSLPTPRPLPRT 342
           T  ++ + S+ +P T   T   S PVT+  T   S P P P   T
Sbjct: 358 TPSSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAPVPTPSSST 402

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>SYN2_RAT (Q63537) Synapsin-2 (Synapsin II)|
          Length = 586

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 17/48 (35%), Positives = 19/48 (39%)
 Frame = +1

Query: 205 GTAPTACSTSARSPATPRAT*PVSFPVTTDGTLRGSLPTPRPLPRTGS 348
           GTA  + +TSA SP   R   P   P           P P P P  GS
Sbjct: 41  GTATASAATSAASPGPERRPPPAQAPAPQPA------PQPAPTPSVGS 82

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>GLNA_MOUSE (P15105) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 372

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 18/61 (29%), Positives = 26/61 (42%)
 Frame = +3

Query: 186 VXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHC 365
           V    PW+G ++   L    G P  + +  FPG  G    G+ AD    A  R++   H 
Sbjct: 123 VSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADK---AYGRDIVEAHY 179

Query: 366 R 368
           R
Sbjct: 180 R 180

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>GLNA_HUMAN (P15104) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 372

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 1/76 (1%)
 Frame = +3

Query: 144 ARVTMRKTAAKAKP-VXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLSAD 320
           A   +R T  +    V    PW+G ++   L    G P  + +  FPG  G    G+ AD
Sbjct: 108 AETNLRHTCKRIMDMVSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGAD 167

Query: 321 PETFAKNRELEVIHCR 368
               A  R++   H R
Sbjct: 168 R---AYGRDIVEAHYR 180

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>GLNA_ACOCA (Q9QY94) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 372

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 18/61 (29%), Positives = 26/61 (42%)
 Frame = +3

Query: 186 VXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHC 365
           V    PW+G ++   L    G P  + +  FPG  G    G+ AD    A  R++   H 
Sbjct: 123 VSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADK---AYGRDIVEAHY 179

Query: 366 R 368
           R
Sbjct: 180 R 180

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>MRP7_ARATH (Q9LK62) Multidrug resistance-associated protein 7 (EC 3.6.3.44)|
            (Glutathione S-conjugate transporting ATPase 7)
            (ATP-energized glutathione S-conjugate pump 7)
          Length = 1493

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 12/26 (46%), Positives = 19/26 (73%)
 Frame = -2

Query: 370  HRQWITSSSRFLAKVSGSAESPAVSH 293
            +RQ+  S++R LA++SG + SP V H
Sbjct: 1076 YRQYYISAARELARLSGISRSPLVQH 1101

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>GLNA_HEBCY (Q96UV5) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 354

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 16/50 (32%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
 Frame = +3

Query: 147 RVTMRKTAAKA-KPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYG 293
           R   R  AAK  +      PW+G ++   L    G P  +  G FPG  G
Sbjct: 105 RTNFRHHAAKVMEQAKEDVPWFGLEQEYTLFDADGSPYGWPKGGFPGPQG 154

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>KAS2_STRGA (P16539) Tetracenomycin C polyketide putative beta-ketoacyl|
           synthase 2 (EC 2.3.1.-)
          Length = 409

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = -1

Query: 374 GPPAVDHLQLPVLGKGLGVGREPRSVPSVVTGKL-TGQVARGVA 246
           G PA+D  +   L +  G G  P + P  +TG+L  G  A  VA
Sbjct: 305 GVPALDRAEAEALAEVFGPGAVPVTAPKTMTGRLYAGGAALDVA 348

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>GLNA_TUBBO (Q86ZU6) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 358

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +3

Query: 201 PWYGSDRVLYLGPLSGDPPSYLTGEFPGDYG 293
           PW+G ++   L  L G+P  +  G FPG  G
Sbjct: 128 PWFGLEQEYTLFDLYGNPYGWPKGGFPGPQG 158

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>FPGT_HUMAN (O14772) Fucose-1-phosphate guanylyltransferase (EC 2.7.7.30)|
           (GDP-L-fucose pyrophosphorylase) (GDP-L-fucose
           diphosphorylase)
          Length = 594

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +2

Query: 290 RMGHCGALCRPRDLCQEPGAGGD 358
           +M    A+CRP + CQ+  AGGD
Sbjct: 235 KMYQFNAVCRPGNFCQQDFAGGD 257

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>ALDA_ECOLI (P25553) Aldehyde dehydrogenase A (EC 1.2.1.22) (Lactaldehyde|
           dehydrogenase) (Glycolaldehyde dehydrogenase) (EC
           1.2.1.21)
          Length = 478

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 6/43 (13%)
 Frame = -1

Query: 362 VDHLQLP------VLGKGLGVGREPRSVPSVVTGKLTGQVARG 252
           VD + LP      VLG+G  VG+E    P V    +TG V+ G
Sbjct: 191 VDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAG 233

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>NCOR2_HUMAN (Q9Y618) Nuclear receptor corepressor 2 (N-CoR2) (Silencing mediator|
            of retinoic acid and thyroid hormone receptor) (SMRT)
            (SMRTe) (Thyroid-, retinoic-acid-receptor-associated
            corepressor) (T3 receptor-associating factor) (TRAC) (CTG
            repeat p
          Length = 2517

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 18/45 (40%), Positives = 20/45 (44%), Gaps = 7/45 (15%)
 Frame = +1

Query: 226  STSARSPATPRAT*PVSFPVTTDGTLRGSLPT-------PRPLPR 339
            STS  SP  P AT P +      GTL G  PT       P+  PR
Sbjct: 1900 STSTSSPVRPAATFPPATHCPLGGTLDGVYPTLMEPVLLPKEAPR 1944

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>MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, tracheobronchial)|
            (High molecular weight salivary mucin MG1) (Sublingual
            gland mucin)
          Length = 5703

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = +1

Query: 208  TAPTACSTSARSPATPRAT*PVSFPVTTDGTLRGSLPTPRPLP 336
            T PTA S+ A S ++PR     + PV T    + +  +  P+P
Sbjct: 4229 TTPTATSSKATSSSSPRTA--TTLPVLTSTATKSTATSVTPIP 4269

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>FLP1_SCHPO (Q9P7H1) Tyrosine-protein phosphatase CDC14 homolog (EC 3.1.3.48)|
           (CDC fourteen-like phosphatase 1)
          Length = 537

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 18/47 (38%), Positives = 23/47 (48%)
 Frame = +1

Query: 247 ATPRAT*PVSFPVTTDGTLRGSLPTPRPLPRTGSWR*STAGGPCSAR 387
           A P AT P      T+GT + ++ TP P P  G  R  +   P SAR
Sbjct: 358 AEPLATPPRHPLNATNGTSQSNISTPLPEPTPGQPRKVSGHNPPSAR 404

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>ABFB_STRLI (P96463) Alpha-L-arabinofuranosidase precursor (EC 3.2.1.55)|
           (Arabinosidase)
          Length = 475

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +3

Query: 240 LSGDPPSYLTGEFPGDYGWDTAGLSADPET 329
           L+G PP+  T   P  Y W + G+ A P++
Sbjct: 166 LTGTPPTDGTCALPSTYRWSSTGVLAQPKS 195

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>ABFB_STRCO (O54161) Alpha-L-arabinofuranosidase precursor (EC 3.2.1.55)|
           (Arabinosidase)
          Length = 475

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +3

Query: 240 LSGDPPSYLTGEFPGDYGWDTAGLSADPET 329
           L+G PP+  T   P  Y W + G+ A P++
Sbjct: 166 LTGTPPTDGTCALPSTYRWSSTGVLAQPKS 195

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>ZN499_HUMAN (Q96K62) Zinc finger protein 499|
          Length = 511

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 15/44 (34%), Positives = 18/44 (40%)
 Frame = +1

Query: 211 APTACSTSARSPATPRAT*PVSFPVTTDGTLRGSLPTPRPLPRT 342
           AP   + S  +PA P A  P   P     T  G +P P   P T
Sbjct: 343 APPPSAPSGPAPAPPPAFYPTLQPEAAPSTQLGEVPAPSAAPTT 386

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>GCSH2_PSEAE (Q9HTX6) Glycine cleavage system H protein 2|
          Length = 129

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 18/62 (29%), Positives = 27/62 (43%)
 Frame = -1

Query: 389 ERAEHGPPAVDHLQLPVLGKGLGVGREPRSVPSVVTGKLTGQVARGVAGERAEVEHAVGA 210
           + A+     V  ++LP LGK L  G+E   V SV   K    +   + GE   +  A+  
Sbjct: 31  DHAQEALGDVVFIELPELGKTLAAGQEAGVVESV---KAASDIYSPIGGEVIAINEALAD 87

Query: 209 VP 204
            P
Sbjct: 88  TP 89

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>DOCK_SULAC (P27414) Probable signal recognition particle protein (Docking|
           protein) (P41)
          Length = 369

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = +3

Query: 282 GDYGWDTAGLSADPETFAKNRELEVI 359
           G YG D A ++ D  +FAK+R ++V+
Sbjct: 234 GKYGADPASVAFDAISFAKSRNIDVV 259

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>PYGO_DROME (Q9V9W8) Protein pygopus (Protein gammy legs)|
          Length = 815

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +1

Query: 217 TACSTSARSPATPRAT*PVSFPVTTDGTLRGSLPTPRPLP 336
           +  S+S  SPATP  T     P +T  ++  S+PT  P P
Sbjct: 448 SVASSSVPSPATPTLT-----PTSTATSMSTSVPTSSPAP 482

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>GUN1_RALSO (P58599) Endoglucanase precursor (EC 3.2.1.4)|
           (Endo-1,4-beta-glucanase) (Cellulase)
          Length = 424

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
 Frame = +3

Query: 270 GEFPGDYGWDTAGLSADPETFAKNRELEVIHC--RWAML 380
           G  PG YG +    SAD  T+ KN+ + ++    RW  L
Sbjct: 130 GSLPGTYGSNYIYPSADSATYYKNKGMNLVRLPFRWERL 168

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>GLNA_CHICK (P16580) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 373

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 18/61 (29%), Positives = 26/61 (42%)
 Frame = +3

Query: 186 VXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHC 365
           V    PW+G ++   L    G P  + +  FPG  G    G+ AD    A  R++   H 
Sbjct: 124 VSNQHPWFGMEQEYTLLGTDGHPFGWPSNCFPGPQGPYYCGVGADK---AYGRDIVEAHY 180

Query: 366 R 368
           R
Sbjct: 181 R 181

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>IF2_CORDI (Q6NGN2) Translation initiation factor IF-2|
          Length = 953

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 17/62 (27%), Positives = 26/62 (41%), Gaps = 2/62 (3%)
 Frame = +1

Query: 205 GTAPTACSTSARSPATPRAT*PVSFPVTTDGTLRGSLPTP--RPLPRTGSWR*STAGGPC 378
           G +     +SA  PA P+   P     ++     GS+P P  +P P+ G      A  P 
Sbjct: 121 GFSAAKAESSAPKPAAPKPAAPKPAAQSSTTATPGSMPRPQAKPAPKPGGRAPRVANNPF 180

Query: 379 SA 384
           S+
Sbjct: 181 SS 182


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,234,341
Number of Sequences: 219361
Number of extensions: 815726
Number of successful extensions: 3179
Number of sequences better than 10.0: 111
Number of HSP's better than 10.0 without gapping: 2895
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3152
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 1380984984
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result