>NADA_AGRT5 (Q8U8J3) Quinolinate synthetase A|
          Length = 345

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 17/37 (45%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
 Frame = -2

Query: 108 LAACSRLL-PEATPLTPDMSIDCAMAAC*TPTRDDIA 1
           +A  ++LL PE T L PDM+  C++A   TP  +DIA
Sbjct: 110 MAETAKLLNPEKTVLIPDMAAGCSLADSITP--EDIA 144

>FMC1_ECOLI (P02971) CFA/I fimbrial subunit B precursor (Colonization factor|
           antigen I subunit B) (CFA/I pilin) (CFA/I antigen)
          Length = 170

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = +2

Query: 35  AMAQSMLMSGVNGVASGRSLLQAARPSSAST 127
           A A     SGVNGV+S + L+ +A P +A T
Sbjct: 121 AAALGYSASGVNGVSSSQELVISAAPKTAGT 151

>NADA_XYLFA (Q9PC58) Quinolinate synthetase A|
          Length = 339

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
 Frame = -2

Query: 108 LAACSRLL-PEATPLTPDMSIDCAMAAC*TPTRDDIA 1
           +A  ++LL PE T L PDM   C++A   TP  +D+A
Sbjct: 104 MAETAKLLNPEKTVLIPDMEAGCSLAESITP--EDVA 138

>RECX_THIFE (P37866) Regulatory protein recX|
          Length = 90

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = +1

Query: 190 LRPDHGPVRQVQDQGRAGQEGRCAQAQDGGRHLRHVRRDRF 312
           +R  HGP+R  QD  RAG E   A   D  +  + V + RF
Sbjct: 7   VRQGHGPLRLRQDLQRAGVEATAALEIDWLQQAQAVCQKRF 47

>ARP6_SCHPO (O94241) Actin-like protein arp6|
          Length = 401

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 11/33 (33%), Positives = 13/33 (39%)
 Frame = +1

Query: 199 DHGPVRQVQDQGRAGQEGRCAQAQDGGRHLRHV 297
           DHG     Q+    GQ G C    D G    H+
Sbjct: 138 DHGSFTMNQEDAYTGQHGECVLVIDSGYSFTHI 170


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,845,007
Number of Sequences: 219361
Number of extensions: 477061
Number of successful extensions: 1839
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1792
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1839
length of database: 80,573,946
effective HSP length: 88
effective length of database: 61,270,178
effective search space used: 1470484272
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)