ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal14n19
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_188347.1| Oryza sativa (japonica cultivar-group), Ozsa809... 125 2e-25
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 78 3e-11
3dbj|AP003052.3| Oryza sativa (japonica cultivar-group) genomic D... 78 3e-11
4dbj|AP001551.1| Oryza sativa (japonica cultivar-group) genomic D... 78 3e-11
5gb|AC134933.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.44
6dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.44
7dbj|AK068601.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.44
8ref|XM_463438.1| Oryza sativa (japonica cultivar-group), predic... 42 1.8
9gb|DQ119665.1| Chlamydomonas reinhardtii central apparatus assoc... 42 1.8
10emb|AJ001834.2|XLRNAIRO1 Xenopus laevis mRNA for an homeobox Iro... 42 1.8
11emb|AL669852.6| Mouse DNA sequence from clone RP23-339F11 on chr... 42 1.8
12dbj|AP003274.4| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
13dbj|AK107573.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.8
14dbj|AP003256.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
15ref|NM_202477.1| Arabidopsis thaliana DRH1 AT3G01540 (DRH1) tran... 40 6.9
16ref|NM_111020.2| Arabidopsis thaliana DRH1 AT3G01540 (DRH1) tran... 40 6.9
17ref|NM_180161.1| Arabidopsis thaliana DRH1 AT3G01540 (DRH1) tran... 40 6.9
18ref|NM_001035542.1| Arabidopsis thaliana DRH1 AT3G01540 (DRH1) t... 40 6.9
19ref|NM_014700.2| Homo sapiens RAB11 family interacting protein 3... 40 6.9
20gb|AC108875.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.9
21gb|AE017344.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 6.9
22gb|BC051360.1| Homo sapiens RAB11 family interacting protein 3 (... 40 6.9
23gb|AC137617.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.9
24gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome 40 6.9
25emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 40 6.9
26ref|XM_570633.1| Cryptococcus neoformans var. neoformans JEC21 h... 40 6.9
27gb|AC009325.8|ATAC009325 Arabidopsis thaliana chromosome III BAC... 40 6.9
28emb|Z98882.4|HS356B8 Human DNA sequence from clone LA16c-356B8 o... 40 6.9
29emb|AL592436.7| Human DNA sequence from clone RP11-710N8 on chro... 40 6.9
30gb|AY130007.1| Homo sapiens MU-MB-17.148 mRNA, partial cds 40 6.9
31gb|BT009670.1| Arabidopsis thaliana At3g01540 gene, complete cds 40 6.9
32gb|AE006463.1| Homo sapiens 16p13.3 sequence section 2 of 8 40 6.9
33emb|CR622821.1| full-length cDNA clone CS0DF023YO22 of Fetal bra... 40 6.9
34gb|AE012396.1| Xanthomonas campestris pv. campestris str. ATCC 3... 40 6.9
35gb|AC092067.2| Homo sapiens chromosome 19 clone CTB-184G21, comp... 40 6.9
36gb|AF462866.1|AF462866 Arabidopsis thaliana AT3g01540/F4P13_9 mR... 40 6.9
37gb|AY062591.1| Arabidopsis thaliana RNA helicase, DRH1 (At3g0154... 40 6.9
38gb|AF298118.1|AF298118 Zea mays putative transcription factor Go... 40 6.9
39gb|AF428313.1|AF428313 Arabidopsis thaliana AT3g01540/F4P13_9 mR... 40 6.9
40gb|AF395731.1|AF395731 Homo sapiens eferin mRNA, complete cds 40 6.9
41gb|AY050375.1| Arabidopsis thaliana AT3g01540/F4P13_9 mRNA, comp... 40 6.9
42gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 40 6.9
43gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g... 40 6.9
44gb|AF318579.1|AF318579 Zea mays putative transcription factor GO... 40 6.9
45emb|AL929088.23| Mouse DNA sequence from clone RP23-360J2 on chr... 40 6.9
46dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
47emb|BX823517.1|CNS0A7FC Arabidopsis thaliana Full-length cDNA Co... 40 6.9
48gb|AC121253.3| Homo sapiens chromosome 3 clone RP11-208G16, comp... 40 6.9
49gb|AC011555.5|AC011555 Homo sapiens chromosome 19 clone LLNLR-28... 40 6.9
50dbj|AP004300.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
51dbj|AB014565.1| Homo sapiens mRNA for KIAA0665 protein, partial cds 40 6.9
52dbj|AK120971.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.9
53dbj|AK065818.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.9
54gb|AY108112.1| Zea mays PCO067839 mRNA sequence 40 6.9
55dbj|AP000462.2| Homo sapiens genomic DNA, chromosome 11q clone:B... 40 6.9
56gb|AF038180.1|AF038180 Homo sapiens clone 23794 mRNA sequence 40 6.9
57dbj|AB010259.1| Arabidopsis thaliana mRNA for DRH1, complete cds 40 6.9
58dbj|AB017654.1| Homo sapiens genomic DNA, chromosome 11q23.2, cl... 40 6.9 
>ref|NM_188347.1| Oryza sativa (japonica cultivar-group), Ozsa8098 predicted mRNA
          Length = 1206

 Score =  125 bits (63), Expect = 2e-25
 Identities = 99/111 (89%)
 Strand = Plus / Plus

                                                                        
Query: 81   ccgccggcgaagcctccaccacggtcctccgcttcttctccttcatcggcgccggcgtga 140
            |||||||||| |||||| ||| | ||||||||||| ||| |||| |||||||||| ||||
Sbjct: 1019 ccgccggcgaggcctcctccaagctcctccgcttcctctgcttcgtcggcgccggagtga 1078

                                                               
Query: 141  tctgcaccaaggccatcaacatgtatctcgaccacgagcgcaagcaggagg 191
            ||||||||||||||||||||| ||| | |||| ||||||||||||||||||
Sbjct: 1079 tctgcaccaaggccatcaacacgtaccgcgactacgagcgcaagcaggagg 1129
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 51/55 (92%)
 Strand = Plus / Plus

                                                                      
Query: 137     gtgatctgcaccaaggccatcaacatgtatctcgaccacgagcgcaagcaggagg 191
               ||||||||||||||||||||||||| ||| | |||| ||||||||||||||||||
Sbjct: 5807209 gtgatctgcaccaaggccatcaacacgtaccgcgactacgagcgcaagcaggagg 5807263



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 48/55 (87%)
 Strand = Plus / Plus

                                                                      
Query: 81      ccgccggcgaagcctccaccacggtcctccgcttcttctccttcatcggcgccgg 135
               |||||||||| |||||| ||| | ||||||||||| ||| |||| ||||||||||
Sbjct: 5807055 ccgccggcgaggcctcctccaagctcctccgcttcctctgcttcgtcggcgccgg 5807109



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 183      agcaggaggaggcgtccgccgcggc 207
                |||||||||||||||||| ||||||
Sbjct: 32006337 agcaggaggaggcgtccggcgcggc 32006313
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>dbj|AP003052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0016I09
          Length = 148517

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 51/55 (92%)
 Strand = Plus / Plus

                                                                    
Query: 137   gtgatctgcaccaaggccatcaacatgtatctcgaccacgagcgcaagcaggagg 191
             ||||||||||||||||||||||||| ||| | |||| ||||||||||||||||||
Sbjct: 10950 gtgatctgcaccaaggccatcaacacgtaccgcgactacgagcgcaagcaggagg 11004



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 48/55 (87%)
 Strand = Plus / Plus

                                                                    
Query: 81    ccgccggcgaagcctccaccacggtcctccgcttcttctccttcatcggcgccgg 135
             |||||||||| |||||| ||| | ||||||||||| ||| |||| ||||||||||
Sbjct: 10796 ccgccggcgaggcctcctccaagctcctccgcttcctctgcttcgtcggcgccgg 10850
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>dbj|AP001551.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0451C06
          Length = 151773

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 51/55 (92%)
 Strand = Plus / Plus

                                                                     
Query: 137    gtgatctgcaccaaggccatcaacatgtatctcgaccacgagcgcaagcaggagg 191
              ||||||||||||||||||||||||| ||| | |||| ||||||||||||||||||
Sbjct: 131911 gtgatctgcaccaaggccatcaacacgtaccgcgactacgagcgcaagcaggagg 131965



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 48/55 (87%)
 Strand = Plus / Plus

                                                                     
Query: 81     ccgccggcgaagcctccaccacggtcctccgcttcttctccttcatcggcgccgg 135
              |||||||||| |||||| ||| | ||||||||||| ||| |||| ||||||||||
Sbjct: 131757 ccgccggcgaggcctcctccaagctcctccgcttcctctgcttcgtcggcgccgg 131811
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>gb|AC134933.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0579A05,
             complete sequence
          Length = 107407

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 108   tccgcttcttctccttcatcggcgccggcg 137
             ||||| ||||||||| ||||||||||||||
Sbjct: 45207 tccgcgtcttctcctgcatcggcgccggcg 45236
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                              
Query: 108      tccgcttcttctccttcatcggcgccggcg 137
                ||||| ||||||||| ||||||||||||||
Sbjct: 20311617 tccgcgtcttctcctgcatcggcgccggcg 20311646



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 80       gccgccggcgaagcctccaccacg 103
                ||||||||||| ||||||||||||
Sbjct: 20177044 gccgccggcgatgcctccaccacg 20177067
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>dbj|AK068601.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013153B01, full
           insert sequence
          Length = 690

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 108 tccgcttcttctccttcatcggcgccggcg 137
           ||||| ||||||||| ||||||||||||||
Sbjct: 347 tccgcgtcttctcctgcatcggcgccggcg 376
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>ref|XM_463438.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 429

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 183 agcaggaggaggcgtccgccgcggc 207
           |||||||||||||||||| ||||||
Sbjct: 47  agcaggaggaggcgtccggcgcggc 71
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>gb|DQ119665.1| Chlamydomonas reinhardtii central apparatus associated protein
           C1a-34 mRNA, complete cds
          Length = 921

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 183 agcaggaggaggcgtccgccgcggc 207
           |||||||||||||| ||||||||||
Sbjct: 578 agcaggaggaggcggccgccgcggc 602
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>emb|AJ001834.2|XLRNAIRO1 Xenopus laevis mRNA for an homeobox Iro protein 1
          Length = 2069

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 200 gccgcggcagaagcagcagcggtcgcagc 228
           |||||||||| ||||||||||| ||||||
Sbjct: 402 gccgcggcagcagcagcagcggccgcagc 430
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>emb|AL669852.6| Mouse DNA sequence from clone RP23-339F11 on chromosome 11, complete
             sequence
          Length = 116014

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 140   atctgcaccaaggccatcaac 160
             |||||||||||||||||||||
Sbjct: 56724 atctgcaccaaggccatcaac 56704
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>dbj|AP003274.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0512C01
          Length = 176261

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 183   agcaggaggaggcgtccgccgcggc 207
             |||||||||||||||||| ||||||
Sbjct: 48151 agcaggaggaggcgtccggcgcggc 48127
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>dbj|AK107573.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-D05, full
           insert sequence
          Length = 1204

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 183 agcaggaggaggcgtccgccgcggc 207
           |||||||||||||||||| ||||||
Sbjct: 144 agcaggaggaggcgtccggcgcggc 168
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>dbj|AP003256.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0460E08
          Length = 170021

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 183    agcaggaggaggcgtccgccgcggc 207
              |||||||||||||||||| ||||||
Sbjct: 103064 agcaggaggaggcgtccggcgcggc 103040
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>ref|NM_202477.1| Arabidopsis thaliana DRH1 AT3G01540 (DRH1) transcript variant
           AT3G01540.3 mRNA, complete cds
          Length = 2365

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 207 cagaagcagcagcggtcgcagcca 230
           |||||||||||||||| |||||||
Sbjct: 204 cagaagcagcagcggtagcagcca 181
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>ref|NM_111020.2| Arabidopsis thaliana DRH1 AT3G01540 (DRH1) transcript variant
           AT3G01540.1 mRNA, complete cds
          Length = 2392

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 207 cagaagcagcagcggtcgcagcca 230
           |||||||||||||||| |||||||
Sbjct: 234 cagaagcagcagcggtagcagcca 211
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>ref|NM_180161.1| Arabidopsis thaliana DRH1 AT3G01540 (DRH1) transcript variant
           AT3G01540.2 mRNA, complete cds
          Length = 2395

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 207 cagaagcagcagcggtcgcagcca 230
           |||||||||||||||| |||||||
Sbjct: 234 cagaagcagcagcggtagcagcca 211
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>ref|NM_001035542.1| Arabidopsis thaliana DRH1 AT3G01540 (DRH1) transcript variant
           AT3G01540.4 mRNA, complete cds
          Length = 2289

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 207 cagaagcagcagcggtcgcagcca 230
           |||||||||||||||| |||||||
Sbjct: 234 cagaagcagcagcggtagcagcca 211
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>ref|NM_014700.2| Homo sapiens RAB11 family interacting protein 3 (class II)
            (RAB11FIP3), mRNA
          Length = 4272

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 61   ttcccccaccaccatgtccg 80
            ||||||||||||||||||||
Sbjct: 3187 ttcccccaccaccatgtccg 3168
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>gb|AC108875.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1123_C08,
             complete sequence
          Length = 132017

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 80    gccgccggcgaagcctccaccacg 103
             ||||||||||| ||||||||||||
Sbjct: 65705 gccgccggcgatgcctccaccacg 65728
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>gb|AE017344.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 4, complete
               sequence
          Length = 1783081

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 203     gcggcagaagcagcagcggt 222
               ||||||||||||||||||||
Sbjct: 1083576 gcggcagaagcagcagcggt 1083595
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>gb|BC051360.1| Homo sapiens RAB11 family interacting protein 3 (class II), mRNA
            (cDNA clone MGC:59778 IMAGE:6646253), complete cds
          Length = 4272

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 61   ttcccccaccaccatgtccg 80
            ||||||||||||||||||||
Sbjct: 3187 ttcccccaccaccatgtccg 3168
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>gb|AC137617.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0084P24, complete sequence
          Length = 148784

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 80    gccgccggcgaagcctccaccacg 103
             ||||||||||| ||||||||||||
Sbjct: 15316 gccgccggcgatgcctccaccacg 15339
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>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome
          Length = 3814139

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 126     tcggcgccggcgtgatctgc 145
               ||||||||||||||||||||
Sbjct: 1010903 tcggcgccggcgtgatctgc 1010922
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>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 123     tcatcggcgccggcgtgatc 142
               ||||||||||||||||||||
Sbjct: 1779018 tcatcggcgccggcgtgatc 1778999
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>ref|XM_570633.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein
           (CND03920) partial mRNA
          Length = 985

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 203 gcggcagaagcagcagcggt 222
           ||||||||||||||||||||
Sbjct: 716 gcggcagaagcagcagcggt 697
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>gb|AC009325.8|ATAC009325 Arabidopsis thaliana chromosome III BAC F4P13 genomic sequence,
             complete sequence
          Length = 105543

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 207   cagaagcagcagcggtcgcagcca 230
             |||||||||||||||| |||||||
Sbjct: 38109 cagaagcagcagcggtagcagcca 38132
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>emb|Z98882.4|HS356B8 Human DNA sequence from clone LA16c-356B8 on chromosome 16 Contains the
             3' end of the RAB11FIP3 gene for RAB11 family interacting
             protein 3 (class II) and a CpG island, complete sequence
          Length = 36507

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 61    ttcccccaccaccatgtccg 80
             ||||||||||||||||||||
Sbjct: 26399 ttcccccaccaccatgtccg 26380
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>emb|AL592436.7| Human DNA sequence from clone RP11-710N8 on chromosome 1 Contains a
             transcription elongation factor B (SIII), polypeptide 1
             (15kDa, elongin C) (TCEB1) pseudogene and a CCR4-NOT
             transcription complex, subunit 7 (CNOT7) pseudogene,
             complete sequence
          Length = 96782

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 392   gttttatgtaatgtattgtgataa 415
             ||||||||||||||||||| ||||
Sbjct: 61881 gttttatgtaatgtattgtcataa 61858
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>gb|AY130007.1| Homo sapiens MU-MB-17.148 mRNA, partial cds
          Length = 2368

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 61   ttcccccaccaccatgtccg 80
            ||||||||||||||||||||
Sbjct: 1257 ttcccccaccaccatgtccg 1238
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>gb|BT009670.1| Arabidopsis thaliana At3g01540 gene, complete cds
          Length = 1857

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 207 cagaagcagcagcggtcgcagcca 230
           |||||||||||||||| |||||||
Sbjct: 25  cagaagcagcagcggtagcagcca 2
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>gb|AE006463.1| Homo sapiens 16p13.3 sequence section 2 of 8
          Length = 260418

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 61     ttcccccaccaccatgtccg 80
              ||||||||||||||||||||
Sbjct: 254010 ttcccccaccaccatgtccg 253991
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>emb|CR622821.1| full-length cDNA clone CS0DF023YO22 of Fetal brain of Homo sapiens
           (human)
          Length = 1680

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 61  ttcccccaccaccatgtccg 80
           ||||||||||||||||||||
Sbjct: 614 ttcccccaccaccatgtccg 595
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>gb|AE012396.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 304
            of 460 of the complete genome
          Length = 10029

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 79   cgccgccggcgaagcctcca 98
            ||||||||||||||||||||
Sbjct: 8763 cgccgccggcgaagcctcca 8782
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>gb|AC092067.2| Homo sapiens chromosome 19 clone CTB-184G21, complete sequence
          Length = 61958

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 295   gccctgacctcggaggtggg 314
             ||||||||||||||||||||
Sbjct: 27665 gccctgacctcggaggtggg 27684
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>gb|AF462866.1|AF462866 Arabidopsis thaliana AT3g01540/F4P13_9 mRNA sequence
          Length = 2415

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 207 cagaagcagcagcggtcgcagcca 230
           |||||||||||||||| |||||||
Sbjct: 228 cagaagcagcagcggtagcagcca 205
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>gb|AY062591.1| Arabidopsis thaliana RNA helicase, DRH1 (At3g01540; F4P13.9) mRNA,
           complete cds
          Length = 2264

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 207 cagaagcagcagcggtcgcagcca 230
           |||||||||||||||| |||||||
Sbjct: 228 cagaagcagcagcggtagcagcca 205
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>gb|AF298118.1|AF298118 Zea mays putative transcription factor Golden2 gene, complete cds
          Length = 5168

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 198  ccgccgcggcagaagcagcagcgg 221
            |||||||||| |||||||||||||
Sbjct: 3966 ccgccgcggctgaagcagcagcgg 3989
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>gb|AF428313.1|AF428313 Arabidopsis thaliana AT3g01540/F4P13_9 mRNA, complete cds
          Length = 2067

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 207 cagaagcagcagcggtcgcagcca 230
           |||||||||||||||| |||||||
Sbjct: 130 cagaagcagcagcggtagcagcca 107
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>gb|AF395731.1|AF395731 Homo sapiens eferin mRNA, complete cds
          Length = 4080

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 61   ttcccccaccaccatgtccg 80
            ||||||||||||||||||||
Sbjct: 3236 ttcccccaccaccatgtccg 3217
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>gb|AY050375.1| Arabidopsis thaliana AT3g01540/F4P13_9 mRNA, complete cds
          Length = 2165

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 207 cagaagcagcagcggtcgcagcca 230
           |||||||||||||||| |||||||
Sbjct: 228 cagaagcagcagcggtagcagcca 205
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>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 79      cgccgccggcgaagcctcca 98
               ||||||||||||||||||||
Sbjct: 1557269 cgccgccggcgaagcctcca 1557250
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>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 77      tccgccgccggcgaagcctccacc 100
               |||||||||| |||||||||||||
Sbjct: 1624712 tccgccgccgccgaagcctccacc 1624689
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>gb|AF318579.1|AF318579 Zea mays putative transcription factor GOLDEN 2 mRNA, complete cds
          Length = 2192

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 198  ccgccgcggcagaagcagcagcgg 221
            |||||||||| |||||||||||||
Sbjct: 1322 ccgccgcggctgaagcagcagcgg 1345
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>emb|AL929088.23| Mouse DNA sequence from clone RP23-360J2 on chromosome 2, complete
             sequence
          Length = 77156

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                     
Query: 186   aggaggaggcgtccgccgcggcagaagcagcagcggtcgc 225
             |||||| ||| || ||||| |||| |||||||||||||||
Sbjct: 64613 aggaggcggcctcagccgcagcagcagcagcagcggtcgc 64574
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 442      accatgtgaaattgtgaatg 461
                ||||||||||||||||||||
Sbjct: 28382528 accatgtgaaattgtgaatg 28382509
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>emb|BX823517.1|CNS0A7FC Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS47ZA08 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 2267

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 207 cagaagcagcagcggtcgcagcca 230
           |||||||||||||||| |||||||
Sbjct: 204 cagaagcagcagcggtagcagcca 181
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>gb|AC121253.3| Homo sapiens chromosome 3 clone RP11-208G16, complete sequence
          Length = 142193

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 388    ttctgttttatgtaatgtat 407
              ||||||||||||||||||||
Sbjct: 107574 ttctgttttatgtaatgtat 107555
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>gb|AC011555.5|AC011555 Homo sapiens chromosome 19 clone LLNLR-280G7, complete sequence
          Length = 42546

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 295   gccctgacctcggaggtggg 314
             ||||||||||||||||||||
Sbjct: 17405 gccctgacctcggaggtggg 17424
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>dbj|AP004300.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0470D12
          Length = 157248

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 442    accatgtgaaattgtgaatg 461
              ||||||||||||||||||||
Sbjct: 108091 accatgtgaaattgtgaatg 108072
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>dbj|AB014565.1| Homo sapiens mRNA for KIAA0665 protein, partial cds
          Length = 4080

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 61   ttcccccaccaccatgtccg 80
            ||||||||||||||||||||
Sbjct: 3236 ttcccccaccaccatgtccg 3217
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>dbj|AK120971.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023041G06, full
           insert sequence
          Length = 5151

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 80  gccgccggcgaagcctccaccacg 103
           ||||||||||| ||||||||||||
Sbjct: 232 gccgccggcgatgcctccaccacg 209
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>dbj|AK065818.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013042K21, full
           insert sequence
          Length = 3553

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 80  gccgccggcgaagcctccaccacg 103
           ||||||||||| ||||||||||||
Sbjct: 232 gccgccggcgatgcctccaccacg 209
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>gb|AY108112.1| Zea mays PCO067839 mRNA sequence
          Length = 773

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 66  ccaccaccatgtccgccgccggcg 89
           |||||||||||||| |||||||||
Sbjct: 601 ccaccaccatgtccaccgccggcg 578
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>dbj|AP000462.2| Homo sapiens genomic DNA, chromosome 11q clone:B4H11, complete
             sequences
          Length = 114467

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 382   cacttattctgttttatgta 401
             ||||||||||||||||||||
Sbjct: 47050 cacttattctgttttatgta 47031
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>gb|AF038180.1|AF038180 Homo sapiens clone 23794 mRNA sequence
          Length = 1536

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 61  ttcccccaccaccatgtccg 80
           ||||||||||||||||||||
Sbjct: 633 ttcccccaccaccatgtccg 614
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>dbj|AB010259.1| Arabidopsis thaliana mRNA for DRH1, complete cds
          Length = 1924

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 207 cagaagcagcagcggtcgcagcca 230
           |||||||||||||||| |||||||
Sbjct: 32  cagaagcagcagcggtagcagcca 9
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>dbj|AB017654.1| Homo sapiens genomic DNA, chromosome 11q23.2, clone:KB4H11, complete
             sequence
          Length = 170965

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 382   cacttattctgttttatgta 401
             ||||||||||||||||||||
Sbjct: 67418 cacttattctgttttatgta 67437


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,230,165
Number of Sequences: 3902068
Number of extensions: 4230165
Number of successful extensions: 109337
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 108691
Number of HSP's gapped (non-prelim): 646
length of query: 513
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 490
effective length of database: 17,143,297,704
effective search space: 8400215874960
effective search space used: 8400215874960
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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