ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal14n18 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY013246.1| Hordeum vulgare chromosome 5 BAC 635P2, complete sequence Length = 102433 Score = 163 bits (82), Expect = 5e-37 Identities = 127/142 (89%) Strand = Plus / Plus Query: 116 tactccctcggttcctaaatataagtcttttaaaagatttcactaggggtctacatatga 175 ||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 89143 tactccctccgttcctaaatataagtcttttaagcgatttcactaagggtctacatatgg 89202 Query: 176 agcaaaatgaatgaatatacattttaaagtatgtctatatacatccgtatatagtccatt 235 |||||||||| ||||| || | | |||||||||||||||||||||||||| ||||||| | Sbjct: 89203 agcaaaatgattgaatctatactctaaagtatgtctatatacatccgtatgtagtccact 89262 Query: 236 agtgaaacctttaaaaagactt 257 ||||||| || || |||||||| Sbjct: 89263 agtgaaatctctagaaagactt 89284 Score = 131 bits (66), Expect = 2e-27 Identities = 123/142 (86%) Strand = Plus / Minus Query: 116 tactccctcggttcctaaatataagtcttttaaaagatttcactaggggtctacatatga 175 |||| |||| ||||||||||||||||||||||| ||||||||| |||||||||| | Sbjct: 14653 tacttcctccgttcctaaatataagtcttttaagcaatttcactaaaggtctacatacgg 14594 Query: 176 agcaaaatgaatgaatatacattttaaagtatgtctatatacatccgtatatagtccatt 235 |||||||||| ||||| || | | |||||||||||||||||||||||||| ||||||| | Sbjct: 14593 agcaaaatgattgaatctatactctaaagtatgtctatatacatccgtatgtagtccact 14534 Query: 236 agtgaaacctttaaaaagactt 257 ||||||| || || |||||||| Sbjct: 14533 agtgaaatctctacaaagactt 14512 Score = 125 bits (63), Expect = 1e-25 Identities = 124/143 (86%), Gaps = 1/143 (0%) Strand = Plus / Plus Query: 116 tactccctcggttcctaaatataagtcttttaaaagatttcactaggggtctacatatga 175 ||||||||| ||||||||||||||||||||| | | |||| |||| || ||||||| | Sbjct: 81136 tactccctccgttcctaaatataagtctttttagaaattttactaaagggctacatacgg 81195 Query: 176 agcaaaatgaatgaatatacattttaaagtatgtctatatacatccgtatatagtcca-t 234 |||||||| ||||||| || | ||||||||||| |||||||||||||||| ||||||| | Sbjct: 81196 agcaaaataaatgaatctatactttaaagtatgcctatatacatccgtatgtagtccatt 81255 Query: 235 tagtgaaacctttaaaaagactt 257 ||||||||||| | ||||||||| Sbjct: 81256 tagtgaaacctcttaaaagactt 81278 Score = 65.9 bits (33), Expect = 8e-08 Identities = 51/57 (89%) Strand = Plus / Minus Query: 116 tactccctcggttcctaaatataagtcttttaaaagatttcactaggggtctacata 172 ||||||||| |||||||||||||||||||| | |||||||||||| || ||||||| Sbjct: 89306 tactccctccgttcctaaatataagtctttctagagatttcactagtggactacata 89250 Score = 65.9 bits (33), Expect = 8e-08 Identities = 51/57 (89%) Strand = Plus / Plus Query: 116 tactccctcggttcctaaatataagtcttttaaaagatttcactaggggtctacata 172 ||||||||| |||||||||||||||||||| | |||||||||||| || ||||||| Sbjct: 14490 tactccctccgttcctaaatataagtctttgtagagatttcactagtggactacata 14546 Score = 61.9 bits (31), Expect = 1e-06 Identities = 103/127 (81%) Strand = Plus / Minus Query: 131 taaatataagtcttttaaaagatttcactaggggtctacatatgaagcaaaatgaatgaa 190 ||||||||||| |||| ||||||||| ||| || || |||| | || ||||||| |||| Sbjct: 83613 taaatataagttttttttaagatttcattagaggactgcatacggagtaaaatgagtgaa 83554 Query: 191 tatacattttaaagtatgtctatatacatccgtatatagtccattagtgaaacctttaaa 250 | |||| | || | |||||||| ||||||| |||||| ||| |||| |||| || |||| Sbjct: 83553 tctacactctagaatatgtctacatacatctatatataatcccttagcgaaatctctaaa 83494 Query: 251 aagactt 257 ||||||| Sbjct: 83493 aagactt 83487 Score = 61.9 bits (31), Expect = 1e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 114 actactccctcggttcctaaatataagtcttttaaaagatttcacta 160 |||||| |||| ||||||||||||||||||||||| || |||||||| Sbjct: 81302 actacttcctccgttcctaaatataagtcttttaagaggtttcacta 81256 Score = 58.0 bits (29), Expect = 2e-05 Identities = 96/117 (82%), Gaps = 1/117 (0%) Strand = Plus / Minus Query: 114 actactccctcggttcctaaatataagtcttttaaaagatttcactaggggtctacatat 173 ||||||||||| ||||||||||||||| | ||| | | ||||||||| | ||||||| Sbjct: 66769 actactccctccgttcctaaatataagaccttttacaaatttcacta-tagactacatac 66711 Query: 174 gaagcaaaatgaatgaatatacattttaaagtatgtctatatacatccgtatatagt 230 | |||||||||| ||||| ||||| ||| |||| ||| |||||||||||| |||| Sbjct: 66710 ggagcaaaatgagtgaatttacatcccaaaatatgactacatacatccgtatgtagt 66654 Score = 50.1 bits (25), Expect = 0.005 Identities = 37/41 (90%) Strand = Plus / Plus Query: 116 tactccctcggttcctaaatataagtcttttaaaagatttc 156 ||||| ||| ||||||||||||||||||||| | ||||||| Sbjct: 83465 tactctctccgttcctaaatataagtctttttagagatttc 83505 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Plus Query: 115 ctactccctcggttcctaaatataag 140 |||||||||| ||||||||||||||| Sbjct: 66605 ctactccctccgttcctaaatataag 66630
>gb|AY943294.1| Hordeum vulgare subsp. vulgare clone BAC 673I14, complete sequence Length = 108608 Score = 163 bits (82), Expect = 5e-37 Identities = 127/142 (89%) Strand = Plus / Minus Query: 116 tactccctcggttcctaaatataagtcttttaaaagatttcactaggggtctacatatga 175 ||||||||| ||||||||||||||||||||||| | ||||||||| | | ||||||| | Sbjct: 91844 tactccctccgttcctaaatataagtcttttaagaaatttcactaagagactacatacaa 91785 Query: 176 agcaaaatgaatgaatatacattttaaagtatgtctatatacatccgtatatagtccatt 235 |||||||||| |||||||| ||||||||||||||||| |||||||||||| |||||| | Sbjct: 91784 agcaaaatgagtgaatatatattttaaagtatgtctaaatacatccgtatgtagtcctat 91725 Query: 236 agtgaaacctttaaaaagactt 257 |||||||||| ||||||||||| Sbjct: 91724 agtgaaacctctaaaaagactt 91703 Score = 123 bits (62), Expect = 4e-25 Identities = 114/130 (87%), Gaps = 1/130 (0%) Strand = Plus / Minus Query: 116 tactccctcggttcctaaatataagtcttttaaaagatttcactaggggtctacatatga 175 ||||||||| ||||||||||||||||||||||| | |||| || ||| ||||||||| || Sbjct: 85397 tactccctctgttcctaaatataagtcttttaagatattt-accaggagtctacatacga 85339 Query: 176 agcaaaatgaatgaatatacattttaaagtatgtctatatacatccgtatatagtccatt 235 |||||||||| | ||| |||| | |||||||||||||||||||||||||| ||| |||| Sbjct: 85338 agcaaaatgagtaaatctacactctaaagtatgtctatatacatccgtatgtagcgcatt 85279 Query: 236 agtgaaacct 245 | |||||||| Sbjct: 85278 aatgaaacct 85269 Score = 69.9 bits (35), Expect = 5e-09 Identities = 87/103 (84%), Gaps = 1/103 (0%) Strand = Plus / Plus Query: 130 ctaaatataagtcttttaaaagatttcactaggggtctacatatgaagcaaaatgaatga 189 ||||||||||||||||| ||| |||||||||| ||||||||| ||| |||| ||||| Sbjct: 18665 ctaaatataagtctttttaaaaatttcactagaagtctacatacgaa-ataaataaatga 18723 Query: 190 atatacattttaaagtatgtctatatacatccgtatatagtcc 232 || || | |||||| ||| ||||||||||| ||||| |||||| Sbjct: 18724 atttatactttaaaatatatctatatacattcgtatgtagtcc 18766 Score = 46.1 bits (23), Expect = 0.076 Identities = 32/35 (91%) Strand = Plus / Plus Query: 126 gttcctaaatataagtcttttaaaagatttcacta 160 ||||||||||||||||||||| | || |||||||| Sbjct: 91691 gttcctaaatataagtctttttagaggtttcacta 91725
>gb|AF254799.1|AF254799 Hordeum vulgare tonoplast intrinsic protein 1 (TIP1), tonoplast intrinsic protein 2 (TIP2), and Rar1 (Rar1) genes, complete cds Length = 65979 Score = 157 bits (79), Expect = 3e-35 Identities = 127/143 (88%) Strand = Plus / Plus Query: 115 ctactccctcggttcctaaatataagtcttttaaaagatttcactaggggtctacatatg 174 |||||||||| ||||||||||||||||||||||| ||||||||||| |||| |||||| | Sbjct: 47279 ctactccctccgttcctaaatataagtcttttaagagatttcactaagggtttacatacg 47338 Query: 175 aagcaaaatgaatgaatatacattttaaagtatgtctatatacatccgtatatagtccat 234 ||| ||||||| ||||| ||| ||||||||||||||||||||||| |||| |||| | Sbjct: 47339 aagtaaaatgagtgaatcaacactttaaagtatgtctatatacatctgtatgtagttctc 47398 Query: 235 tagtgaaacctttaaaaagactt 257 ||||||||||| ||||||||||| Sbjct: 47399 tagtgaaacctctaaaaagactt 47421 Score = 54.0 bits (27), Expect = 3e-04 Identities = 91/111 (81%), Gaps = 1/111 (0%) Strand = Plus / Minus Query: 115 ctactccctcggttcctaaatataagtcttttaaaagatttcactaggggtctacatatg 174 |||||||||| ||||||||||||||| | ||| ||||||| ||||| ||| ||| | Sbjct: 61171 ctactccctccgttcctaaatataagaccttttaaagattacacta-taaactagatacg 61113 Query: 175 aagcaaaatgaatgaatatacattttaaagtatgtctatatacatccgtat 225 |||||||||| ||||| ||||| |||| |||| ||| |||||||||||| Sbjct: 61112 gagcaaaatgagtgaatctacatcctaaaatatgactacatacatccgtat 61062 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Minus Query: 116 tactccctcggttcctaaatataagtcttttaaaagatttcactag 161 ||||||||| |||| |||||||||||||||| | || ||||||||| Sbjct: 47443 tactccctccgttcgtaaatataagtctttttagaggtttcactag 47398 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 116 tactccctcggttcctaaatataa 139 ||||||||| |||||||||||||| Sbjct: 60938 tactccctccgttcctaaatataa 60961
>gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence Length = 261265 Score = 155 bits (78), Expect = 1e-34 Identities = 105/114 (92%) Strand = Plus / Minus Query: 115 ctactccctcggttcctaaatataagtcttttaaaagatttcactaggggtctacatatg 174 ||||| |||| ||||||||||||||||||||||| ||||||||||| ||||||||| | Sbjct: 194501 ctacttcctccgttcctaaatataagtcttttaagcgatttcactagatgtctacatacg 194442 Query: 175 aagcaaaatgaatgaatatacattttaaagtatgtctatatacatccgtatata 228 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 194441 aagcaaaatgattgaatattcattttaaagtatgtctatatacatccgtatata 194388 Score = 95.6 bits (48), Expect = 9e-17 Identities = 100/116 (86%), Gaps = 1/116 (0%) Strand = Plus / Plus Query: 116 tactccctcggttcctaaatataagtcttttaaaagatttcactaggggtctacatatga 175 ||||||||| ||||||||||| ||||||||||| ||||| |||| | ||||||| | Sbjct: 148 tactccctccgttcctaaatacaagtcttttaagagattcaactataga-ctacatacgg 206 Query: 176 agcaaaatgaatgaatatacattttaaagtatgtctatatacatccgtatatagtc 231 |||||||||| ||||| |||| | ||||||||||||||||||||||||| |||||| Sbjct: 207 agcaaaatgagtgaatctacactctaaagtatgtctatatacatccgtacatagtc 262 Score = 69.9 bits (35), Expect = 5e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 114 actactccctcggttcctaaatataagtcttttaaaagatttcacta 160 ||||||||||| ||||||||||||||||||||| |||||| |||||| Sbjct: 136682 actactccctccgttcctaaatataagtctttttaaagatgtcacta 136728 Score = 69.9 bits (35), Expect = 5e-09 Identities = 95/115 (82%) Strand = Plus / Plus Query: 116 tactccctcggttcctaaatataagtcttttaaaagatttcactaggggtctacatatga 175 ||||||||| ||||| ||||||||| | ||| | ||||||||||| | ||||||| | Sbjct: 1592 tactccctccgttccaaaatataagaccttttaggtatttcactaggagactacatacgg 1651 Query: 176 agcaaaatgaatgaatatacattttaaagtatgtctatatacatccgtatatagt 230 |||||||||| ||||| || | | |||| ||||||||| ||||||||||| |||| Sbjct: 1652 agcaaaatgagtgaatctatactctaaaatatgtctatgtacatccgtatgtagt 1706 Score = 65.9 bits (33), Expect = 8e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 116 tactccctcggttcctaaatataagtcttttaaaagatttcacta 160 ||||||||| ||||||||||||||||||||||| | ||||||||| Sbjct: 309 tactccctccgttcctaaatataagtcttttaagaaatttcacta 265 Score = 61.9 bits (31), Expect = 1e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 114 actactccctcggttcctaaatataagtcttttaaaagatttcacta 160 |||||||||| ||||||||||||||||||||| |||||| |||||| Sbjct: 96969 actactcccttcgttcctaaatataagtctttttaaagatgtcacta 97015 Score = 58.0 bits (29), Expect = 2e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 200 taaagtatgtctatatacatccgtatatagtccattagtgaaacctttaaaaa 252 ||||||| |||||||||||||||||| ||||| ||||||||||| |||||| Sbjct: 143261 taaagtacgtctatatacatccgtatgtagtcttgtagtgaaacctctaaaaa 143313 Score = 46.1 bits (23), Expect = 0.076 Identities = 41/47 (87%) Strand = Plus / Plus Query: 116 tactccctcggttcctaaatataagtcttttaaaagatttcactagg 162 |||| |||| ||| |||||||||||||||||| ||| ||||| |||| Sbjct: 190752 tacttcctccgtttctaaatataagtcttttagaagttttcattagg 190798 Score = 46.1 bits (23), Expect = 0.076 Identities = 29/31 (93%) Strand = Plus / Minus Query: 116 tactccctcggttcctaaatataagtctttt 146 ||||| ||| ||||||||||||||||||||| Sbjct: 143342 tactcgctccgttcctaaatataagtctttt 143312 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Minus Query: 115 ctactccctcggttcctaaatataag 140 |||||||||| ||||||||||||||| Sbjct: 1755 ctactccctccgttcctaaatataag 1730 Score = 42.1 bits (21), Expect = 1.2 Identities = 54/65 (83%) Strand = Plus / Plus Query: 166 ctacatatgaagcaaaatgaatgaatatacattttaaagtatgtctatatacatccgtat 225 ||||||| |||||||||||| ||||| || | | |||| |||||| || || |||||||| Sbjct: 217237 ctacatacgaagcaaaatgagtgaatctatactctaaaatatgtcgatgtatatccgtat 217296 Query: 226 atagt 230 |||| Sbjct: 217297 gtagt 217301
>gb|AY643842.1|AY643842S1 Hordeum vulgare subsp. vulgare clone BAC 519K7 hardness locus region Length = 12998 Score = 153 bits (77), Expect = 5e-34 Identities = 128/145 (88%) Strand = Plus / Plus Query: 113 aactactccctcggttcctaaatataagtcttttaaaagatttcactaggggtctacata 172 |||||||||||| ||||||||||||||||||||||| |||||||||| | | ||||||| Sbjct: 12666 aactactccctccgttcctaaatataagtcttttaagcgatttcactaagagactacata 12725 Query: 173 tgaagcaaaatgaatgaatatacattttaaagtatgtctatatacatccgtatatagtcc 232 | |||||||||| ||||| |||| |||||| ||||||||||||||||||||| |||||| Sbjct: 12726 cggagcaaaatgagtgaatctacactttaaaatatgtctatatacatccgtatgtagtcc 12785 Query: 233 attagtgaaacctttaaaaagactt 257 |||||||| || ||||||||||| Sbjct: 12786 tctagtgaaatctctaaaaagactt 12810 Score = 58.0 bits (29), Expect = 2e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 116 tactccctcggttcctaaatataagtcttttaaaagatttcactaggggtctacata 172 ||||||||| ||||| |||||||||||||| | |||||||||||| || ||||||| Sbjct: 12832 tactccctccgttccataatataagtctttttagagatttcactagaggactacata 12776
>gb|AY641412.1| Hordeum vulgare subsp. vulgare retrotransposon Sandra5, complete sequence; splicing factor SF2-like protein (SF2) and universal stress protein (USP1) genes and Hv receptor-kinase-like pseudogene, complete cds; and retrotransposons Sandra6 and Sandra7, complete sequence Length = 82293 Score = 145 bits (73), Expect = 1e-31 Identities = 115/129 (89%) Strand = Plus / Minus Query: 119 tccctcggttcctaaatataagtcttttaaaagatttcactaggggtctacatatgaagc 178 |||||| ||||||| ||||||||||||||| | ||||||||||| ||||||||| ||||| Sbjct: 50628 tccctccgttcctagatataagtcttttaagatatttcactaggagtctacatacgaagc 50569 Query: 179 aaaatgaatgaatatacattttaaagtatgtctatatacatccgtatatagtccattagt 238 ||||||| ||||| |||| |||||| ||||||||||||||||| ||| ||||||| || | Sbjct: 50568 aaaatgagtgaatctacactttaaaatatgtctatatacatccatatgtagtccactaat 50509 Query: 239 gaaaccttt 247 ||||||||| Sbjct: 50508 gaaaccttt 50500 Score = 56.0 bits (28), Expect = 8e-05 Identities = 53/60 (88%), Gaps = 1/60 (1%) Strand = Plus / Plus Query: 115 ctactccctcggttcctaaatataagtcttttaaaagatttcactaggggtctacatatg 174 |||||||||| |||| |||||||||||| |||||||| ||||| ||| || ||||||||| Sbjct: 50468 ctactccctccgttcttaaatataagtc-tttaaaaggtttcattagtggactacatatg 50526
>gb|AY485643.1| Hordeum vulgare subsp. vulgare BAC 615K1, complete sequence Length = 114996 Score = 139 bits (70), Expect = 7e-30 Identities = 124/142 (87%) Strand = Plus / Plus Query: 116 tactccctcggttcctaaatataagtcttttaaaagatttcactaggggtctacatatga 175 ||||||||| || |||||||||||||||||||||| |||| ||||| ||| ||||| | Sbjct: 55558 tactccctccgtacctaaatataagtcttttaaaatattttactagatgtccacatacgg 55617 Query: 176 agcaaaatgaatgaatatacattttaaagtatgtctatatacatccgtatatagtccatt 235 || ||||||||||||| || |||||||||||||||||||||||||||||| |||| |||| Sbjct: 55618 agtaaaatgaatgaatctatattttaaagtatgtctatatacatccgtatgtagttcatt 55677 Query: 236 agtgaaacctttaaaaagactt 257 ||| ||||| || |||||||| Sbjct: 55678 agttgaacctctagaaagactt 55699 Score = 135 bits (68), Expect = 1e-28 Identities = 116/132 (87%) Strand = Plus / Plus Query: 126 gttcctaaatataagtcttttaaaagatttcactaggggtctacatatgaagcaaaatga 185 ||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||| Sbjct: 67795 gttcctaaatataagtcttttaagcgatttcactatatgtctacatacgaagcaaaatga 67854 Query: 186 atgaatatacattttaaagtatgtctatatacatccgtatatagtccattagtgaaacct 245 ||||| |||| | |||| ||||||||||||||||||||||| ||||| |||||||| || Sbjct: 67855 ttgaatgtacactctaaaatatgtctatatacatccgtatatggtccactagtgaaatct 67914 Query: 246 ttaaaaagactt 257 || |||||||| Sbjct: 67915 ctacaaagactt 67926 Score = 123 bits (62), Expect = 4e-25 Identities = 122/142 (85%) Strand = Plus / Plus Query: 116 tactccctcggttcctaaatataagtcttttaaaagatttcactaggggtctacatatga 175 ||||||||| ||||||||||||||||||||||| |||||||||| ||| |||||| Sbjct: 93729 tactccctccgttcctaaatataagtcttttaagcgatttcactaagggattacatacag 93788 Query: 176 agcaaaatgaatgaatatacattttaaagtatgtctatatacatccgtatatagtccatt 235 |||||||||| ||||| |||| | ||||||||||||||||||||||||| |||||| | Sbjct: 93789 agcaaaatgagtgaatctacactctaaagtatgtctatatacatccgtacgtagtcctct 93848 Query: 236 agtgaaacctttaaaaagactt 257 |||| || || ||||||||||| Sbjct: 93849 agtgcaatctctaaaaagactt 93870 Score = 67.9 bits (34), Expect = 2e-08 Identities = 117/142 (82%), Gaps = 2/142 (1%) Strand = Plus / Plus Query: 116 tactccctcggttcctaaatataagtcttttaaaagatttcactaggggtctacatatga 175 |||||| || ||||||||||||||||||||| | ||||| ||||| || ||||||| | Sbjct: 4733 tactccatccgttcctaaatataagtctttttagagattctactagagg-ctacatacgg 4791 Query: 176 agcaaaatgaatgaatatacattttaaagtatgtctatatacatccgtatatagtccatt 235 || ||||||| ||| |||| | ||| |||||| ||||||||||||||| |||||| | Sbjct: 4792 agaaaaatgagtgagcctacactctaaggtatgtatatatacatccgtatgtagtcc-gt 4850 Query: 236 agtgaaacctttaaaaagactt 257 |||| ||||| || |||||||| Sbjct: 4851 agtggaacctctacaaagactt 4872 Score = 60.0 bits (30), Expect = 5e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 116 tactccctcggttcctaaatataagtcttttaaaagatttcactag 161 ||||||||| |||||||||||||||||||| | |||||||||||| Sbjct: 67948 tactccctccgttcctaaatataagtctttgtagagatttcactag 67903 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Minus Query: 116 tactccctcggttcctaaatataagtcttt 145 ||||||||| |||||||||||||||||||| Sbjct: 55721 tactccctccgttcctaaatataagtcttt 55692 Score = 48.1 bits (24), Expect = 0.019 Identities = 42/48 (87%) Strand = Plus / Minus Query: 114 actactccctcggttcctaaatataagtcttttaaaagatttcactag 161 ||||||||||| ||||| |||||||||||||| | ||||| |||||| Sbjct: 93894 actactccctccgttccataatataagtctttttagagattgcactag 93847
>gb|AY661558.1| Hordeum vulgare subsp. vulgare eIF4E gene locus, complete sequence Length = 439641 Score = 139 bits (70), Expect = 7e-30 Identities = 143/167 (85%), Gaps = 4/167 (2%) Strand = Plus / Minus Query: 115 ctactccctcggttcctaaatataagtcttttaaaagatttcactaggggtctacatatg 174 |||||||||| ||| ||||||||||||||||||| |||||| ||||| |||||||||| Sbjct: 143732 ctactccctccgttactaaatataagtcttttaagagattttactagacgtctacatata 143673 Query: 175 aagcaaaatgaatgaatatacattttaaagtatgtctatatacatccgtatatagtccat 234 || | |||||| |||||||| |||||||| ||||| ||||||||||||||| ||||||| Sbjct: 143672 aaactaaatgagtgaatatatattttaaaatatgtttatatacatccgtatgtagtccac 143613 Query: 235 tagtgaaacctttaaaaagacttgc----aggaacggagggagtagt 277 |||||||| | || |||||||| | |||||||||||||||||| Sbjct: 143612 tagtgaaatttctagaaagacttacatttaggaacggagggagtagt 143566 Score = 107 bits (54), Expect = 2e-20 Identities = 120/142 (84%) Strand = Plus / Minus Query: 116 tactccctcggttcctaaatataagtcttttaaaagatttcactaggggtctacatatga 175 ||||||||| ||||| |||||||||| |||||| ||||| |||| | ||||||||| | Sbjct: 30437 tactccctccgttccgaaatataagttttttaagcgattttactacgtgtctacatacgg 30378 Query: 176 agcaaaatgaatgaatatacattttaaagtatgtctatatacatccgtatatagtccatt 235 | |||||||| |||||||||| | |||| ||||||||||||||| ||||| || | || | Sbjct: 30377 aacaaaatgattgaatatacactctaaaatatgtctatatacattcgtatgtaattcact 30318 Query: 236 agtgaaacctttaaaaagactt 257 | |||||||| ||||||||||| Sbjct: 30317 aatgaaacctgtaaaaagactt 30296 Score = 91.7 bits (46), Expect = 1e-15 Identities = 119/142 (83%), Gaps = 1/142 (0%) Strand = Plus / Plus Query: 116 tactccctcggttcctaaatataagtcttttaaaagatttcactaggggtctacatatga 175 ||||||||| || |||||||||||||||||||| ||||| |||| ||||| ||||| || Sbjct: 197492 tactccctccgtccctaaatataagtcttttaagcgattt-actaagggtcaacatacga 197550 Query: 176 agcaaaatgaatgaatatacattttaaagtatgtctatatacatccgtatatagtccatt 235 | ||||| | ||||| || | |||||||||||||||||||||||||| |||| | | Sbjct: 197551 aataaaataattgaatgtatgctctaaagtatgtctatatacatccgtatgtagtttaat 197610 Query: 236 agtgaaacctttaaaaagactt 257 | |||||||| ||||||||||| Sbjct: 197611 aatgaaacctctaaaaagactt 197632 Score = 65.9 bits (33), Expect = 8e-08 Identities = 84/101 (83%) Strand = Plus / Minus Query: 116 tactccctcggttcctaaatataagtcttttaaaagatttcactaggggtctacatatga 175 ||||||||| ||| |||||||||| |||||| | |||||| |||| | | ||||||| || Sbjct: 208503 tactccctccgtttctaaatataaatctttttagagattttactaagtgactacatacga 208444 Query: 176 agcaaaatgaatgaatatacattttaaagtatgtctatata 216 | ||||| ||||||| || ||| |||| |||||||||||| Sbjct: 208443 aataaaataaatgaatgtatattctaaaatatgtctatata 208403 Score = 56.0 bits (28), Expect = 8e-05 Identities = 52/60 (86%) Strand = Plus / Plus Query: 113 aactactccctcggttcctaaatataagtcttttaaaagatttcactaggggtctacata 172 |||||||||||| |||||||||| ||||||||| | | |||||||||| || ||||||| Sbjct: 143565 aactactccctccgttcctaaatgtaagtctttctagaaatttcactagtggactacata 143624 Score = 46.1 bits (23), Expect = 0.076 Identities = 29/31 (93%) Strand = Plus / Plus Query: 116 tactccctcggttcctaaatataagtctttt 146 ||||||||| ||| ||||||||||||||||| Sbjct: 30274 tactccctccgtttctaaatataagtctttt 30304 Score = 40.1 bits (20), Expect = 4.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 115 ctactccctcggttcctaaatataagtctttt 146 ||||||||| ||| ||||||||||||||||| Sbjct: 197655 ctactcccttcgtttctaaatataagtctttt 197624
>gb|AF521177.1| Hordeum vulgare contig 211252, complete sequence Length = 211664 Score = 133 bits (67), Expect = 4e-28 Identities = 124/143 (86%) Strand = Plus / Minus Query: 115 ctactccctcggttcctaaatataagtcttttaaaagatttcactaggggtctacatatg 174 |||||||||| ||||||||||||||||||||| | ||||||| |||| | ||||||| | Sbjct: 76976 ctactccctccgttcctaaatataagtctttttagagatttcgctagacgactacatacg 76917 Query: 175 aagcaaaatgaatgaatatacattttaaagtatgtctatatacatccgtatatagtccat 234 |||||||||| ||||| || ||| |||| |||||||||||||||||| || ||||| | Sbjct: 76916 gagcaaaatgagtgaatctatattctaaaatatgtctatatacatccgaatgtagtctac 76857 Query: 235 tagtgaaacctttaaaaagactt 257 ||||||||||| ||||||||||| Sbjct: 76856 tagtgaaacctctaaaaagactt 76834 Score = 99.6 bits (50), Expect = 6e-18 Identities = 119/142 (83%) Strand = Plus / Minus Query: 116 tactccctcggttcctaaatataagtcttttaaaagatttcactaggggtctacatatga 175 |||||| || ||| ||||||||||||||||||| ||||| |||| | |||||||| | Sbjct: 29997 tactccatccgtttctaaatataagtcttttaagcgattttactaagaatctacatacgg 29938 Query: 176 agcaaaatgaatgaatatacattttaaagtatgtctatatacatccgtatatagtccatt 235 |||||||||| ||||| |||| | |||| ||||||||||| ||||| ||| |||| || | Sbjct: 29937 agcaaaatgattgaatctacactctaaaatatgtctatatgcatccatatgtagttcact 29878 Query: 236 agtgaaacctttaaaaagactt 257 ||| |||||| ||||||||||| Sbjct: 29877 agtaaaacctctaaaaagactt 29856 Score = 77.8 bits (39), Expect = 2e-11 Identities = 96/115 (83%) Strand = Plus / Minus Query: 116 tactccctcggttcctaaatataagtcttttaaaagatttcactaggggtctacatatga 175 ||||||||| |||| ||||||||| | ||| | ||||||| |||| | ||| ||| | Sbjct: 23213 tactccctccgttctaaaatataagaccttttagggatttcattaggagactatatacgg 23154 Query: 176 agcaaaatgaatgaatatacattttaaagtatgtctatatacatccgtatatagt 230 ||||||||||||||||||| | |||||| ||||||||| ||||||||||| |||| Sbjct: 23153 agcaaaatgaatgaatatatactttaaaatatgtctatgtacatccgtatgtagt 23099 Score = 60.0 bits (30), Expect = 5e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 116 tactccctcggttcctaaatataagtcttttaaaagatttcactag 161 ||||||||| ||||||||||||||||||||| | || ||||||||| Sbjct: 76812 tactccctccgttcctaaatataagtctttttagaggtttcactag 76857 Score = 52.0 bits (26), Expect = 0.001 Identities = 32/34 (94%) Strand = Plus / Plus Query: 113 aactactccctcggttcctaaatataagtctttt 146 |||||||||||| ||| ||||||||||||||||| Sbjct: 29831 aactactccctccgtttctaaatataagtctttt 29864
>gb|DQ201157.1| Hordeum vulgare subsp. vulgare cultivar Kompolti korai cryptochrome 2 (Cry2) gene, partial cds; and stowaway MITE, complete sequence Length = 2686 Score = 129 bits (65), Expect = 7e-27 Identities = 107/121 (88%) Strand = Plus / Minus Query: 112 aaactactccctcggttcctaaatataagtcttttaaaagatttcactaggggtctacat 171 ||||||||||||| ||||||||||||||||||||||| | |||||||||| | ||| || Sbjct: 1827 aaactactccctccgttcctaaatataagtcttttaagatatttcactagatgactaaat 1768 Query: 172 atgaagcaaaatgaatgaatatacattttaaagtatgtctatatacatccgtatatagtc 231 | ||||||||||| |||||||||| | ||||||||||||| |||||||||||| ||||| Sbjct: 1767 acaaagcaaaatgagtgaatatacactctaaagtatgtctacatacatccgtatgtagtc 1708 Query: 232 c 232 | Sbjct: 1707 c 1707
>emb|Y14573.1|HVCH4H Hordeum vulgare DNA for chromosome 4H Length = 59748 Score = 127 bits (64), Expect = 3e-26 Identities = 124/144 (86%) Strand = Plus / Plus Query: 114 actactccctcggttcctaaatataagtcttttaaaagatttcactaggggtctacatat 173 ||||||||||| ||||||||||||||||||||||| ||||||||| | |||||||| Sbjct: 23272 actactccctccgttcctaaatataagtcttttaaggaatttcactaatgatctacatac 23331 Query: 174 gaagcaaaatgaatgaatatacattttaaagtatgtctatatacatccgtatatagtcca 233 |||||||||| ||||| |||||| |||| ||||| ||||||||| ||||| |||| || Sbjct: 23332 agagcaaaatgagtgaatctacattctaaaatatgtttatatacattcgtatgtagttca 23391 Query: 234 ttagtgaaacctttaaaaagactt 257 ||||||||| ||||| |||||||| Sbjct: 23392 ttagtgaaatctttagaaagactt 23415 Score = 69.9 bits (35), Expect = 5e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 114 actactccctcggttcctaaatataagtcttttaaaagatttcacta 160 ||||||||||| |||||||||||||||||||| ||||||||||||| Sbjct: 23439 actactccctctgttcctaaatataagtctttctaaagatttcacta 23393 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 133 aatataagtcttttaaaagatttca 157 |||||||||||||||| |||||||| Sbjct: 23088 aatataagtcttttaagagatttca 23064
>gb|U87149.1|HVU87149 Hordeum vulgare nucellin gene, complete cds Length = 3686 Score = 123 bits (62), Expect = 4e-25 Identities = 122/142 (85%) Strand = Plus / Minus Query: 116 tactccctcggttcctaaatataagtcttttaaaagatttcactaggggtctacatatga 175 ||||||||| ||||||||||||||||||||||| |||||||||| ||| |||||| Sbjct: 2180 tactccctccgttcctaaatataagtcttttaagcgatttcactaagggattacatacag 2121 Query: 176 agcaaaatgaatgaatatacattttaaagtatgtctatatacatccgtatatagtccatt 235 |||||||||| ||||| |||| | ||||||||||||||||||||||||| |||||| | Sbjct: 2120 agcaaaatgagtgaatctacactctaaagtatgtctatatacatccgtacgtagtcctct 2061 Query: 236 agtgaaacctttaaaaagactt 257 |||| || || ||||||||||| Sbjct: 2060 agtgcaatctctaaaaagactt 2039 Score = 48.1 bits (24), Expect = 0.019 Identities = 42/48 (87%) Strand = Plus / Plus Query: 114 actactccctcggttcctaaatataagtcttttaaaagatttcactag 161 ||||||||||| ||||| |||||||||||||| | ||||| |||||| Sbjct: 2015 actactccctccgttccataatataagtctttttagagattgcactag 2062
>gb|AF234163.1|AF234163 Hordeum vulgare starch synthase I (SSI) gene, complete cds Length = 8387 Score = 121 bits (61), Expect = 2e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 116 tactccctcggttcctaaatataagtcttttaaaagatttcactaggggtctacatatga 175 ||||||||| ||| ||||||||||||||||||| ||||||||| | | ||||||||| || Sbjct: 251 tactccctccgtttctaaatataagtcttttaagagatttcaccaagagtctacatacga 310 Query: 176 agcaaaatgaatgaatatacattttaaagtatgtctatata 216 |||||||||||||||| | || ||||||||||||||||||| Sbjct: 311 agcaaaatgaatgaatctgcactttaaagtatgtctatata 351 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Minus Query: 116 tactccctcggttcctaaatataagtcttt 145 ||||||||| |||||||||||||||||||| Sbjct: 416 tactccctccgttcctaaatataagtcttt 387
>gb|DQ386610.1| Hordeum vulgare subsp. vulgare protein kinase ABC1063 gene, complete cds Length = 7813 Score = 117 bits (59), Expect = 2e-23 Identities = 107/123 (86%) Strand = Plus / Plus Query: 116 tactccctcggttcctaaatataagtcttttaaaagatttcactaggggtctacatatga 175 ||||||||| || ||||||||||||| |||||| | |||||| ||| ||||||||| | Sbjct: 2192 tactccctccgtacctaaatataagtattttaagatatttcattagatgtctacatacgg 2251 Query: 176 agcaaaatgaatgaatatacattttaaagtatgtctatatacatccgtatatagtccatt 235 ||||||||||||||| || | |||||| ||||||||||||||||||||| ||||||||| Sbjct: 2252 agcaaaatgaatgaacctatactttaaaatatgtctatatacatccgtatgtagtccatt 2311 Query: 236 agt 238 ||| Sbjct: 2312 agt 2314 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Minus Query: 116 tactccctcggttcctaaatataagtcttt 145 ||||||||| |||||||||||||||||||| Sbjct: 2355 tactccctccgttcctaaatataagtcttt 2326
>gb|AY008692.1| Hordeum vulgare transcription factor GAMyb (Gamyb) gene, complete cds Length = 6228 Score = 117 bits (59), Expect = 2e-23 Identities = 107/123 (86%) Strand = Plus / Minus Query: 116 tactccctcggttcctaaatataagtcttttaaaagatttcactaggggtctacatatga 175 ||||||||| || || ||||||||||||||||| | |||||||| || |||| |||| | Sbjct: 5396 tactccctccgtaccaaaatataagtcttttaagatatttcactgggtgtctgcatacgg 5337 Query: 176 agcaaaatgaatgaatatacattttaaagtatgtctatatacatccgtatatagtccatt 235 |||||||||||||||| || | |||||||||||||||||| ||||||| | ||||||||| Sbjct: 5336 agcaaaatgaatgaatctatactttaaagtatgtctatatgcatccgtttgtagtccatt 5277 Query: 236 agt 238 ||| Sbjct: 5276 agt 5274 Score = 89.7 bits (45), Expect = 6e-15 Identities = 69/77 (89%) Strand = Plus / Plus Query: 115 ctactccctcggttcctaaatataagtcttttaaaagatttcactaggggtctacatatg 174 |||||||||| ||||||||||||||||||||||| |||||||||| || |||||||| | Sbjct: 5155 ctactccctccgttcctaaatataagtcttttaagcgatttcactaaggatctacatagg 5214 Query: 175 aagcaaaatgaatgaat 191 |||||||||| ||||| Sbjct: 5215 gagcaaaatgattgaat 5231 Score = 60.0 bits (30), Expect = 5e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 200 taaagtatgtctatatacatccgtatatagtccattagtgaaacctttaaaaagactt 257 |||||||| ||||||||||||||||| ||||||| |||| ||| || || |||||||| Sbjct: 5402 taaagtatatctatatacatccgtatgtagtccactagtaaaatctctagaaagactt 5459 Score = 46.1 bits (23), Expect = 0.076 Identities = 26/27 (96%) Strand = Plus / Plus Query: 115 ctactccctcggttcctaaatataagt 141 |||||||||| |||||||||||||||| Sbjct: 5232 ctactccctccgttcctaaatataagt 5258
>gb|AF250934.1|AF250934 Hordeum vulgare germin B (GerB) gene, complete cds Length = 2798 Score = 117 bits (59), Expect = 2e-23 Identities = 101/115 (87%) Strand = Plus / Plus Query: 116 tactccctcggttcctaaatataagtcttttaaaagatttcactaggggtctacatatga 175 ||||||||| ||| ||||||||||||||||||| | |||||||||| ||||||||| | Sbjct: 389 tactccctccgtttctaaatataagtcttttaagatatttcactagaagtctacatacgg 448 Query: 176 agcaaaatgaatgaatatacattttaaagtatgtctatatacatccgtatatagt 230 |||||||||| | ||| |||||| |||||||||||||||| ||||||||| |||| Sbjct: 449 agcaaaatgagttaatctacattgtaaagtatgtctatatgcatccgtatgtagt 503 Score = 44.1 bits (22), Expect = 0.30 Identities = 28/30 (93%) Strand = Plus / Minus Query: 116 tactccctcggttcctaaatataagtcttt 145 ||||||||| ||||||||||||||| |||| Sbjct: 552 tactccctccgttcctaaatataagacttt 523
>gb|DQ249273.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC 631P8, complete sequence Length = 101158 Score = 115 bits (58), Expect = 1e-22 Identities = 118/138 (85%) Strand = Plus / Plus Query: 120 ccctcggttcctaaatataagtcttttaaaagatttcactaggggtctacatatgaagca 179 ||||| ||||||||||||||||||||| | | |||||| ||| || ||||||| |||||| Sbjct: 71695 ccctccgttcctaaatataagtctttttagacatttcaatagaggactacatacgaagca 71754 Query: 180 aaatgaatgaatatacattttaaagtatgtctatatacatccgtatatagtccattagtg 239 |||||| ||||| || |||||| ||||||||||||||||||||| |||| || ||||| Sbjct: 71755 aaatgagtgaattcacgctttaaaatatgtctatatacatccgtatgtagttcaatagtg 71814 Query: 240 aaacctttaaaaagactt 257 ||| || || |||||||| Sbjct: 71815 aaatctctagaaagactt 71832 Score = 107 bits (54), Expect = 2e-20 Identities = 90/102 (88%) Strand = Plus / Plus Query: 114 actactccctcggttcctaaatataagtcttttaaaagatttcactaggggtctacatat 173 ||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||| Sbjct: 73864 actactccctccgttcctaaatataagtcttttaagcgatttcactaagggtctacattc 73923 Query: 174 gaagcaaaatgaatgaatatacattttaaagtatgtctatat 215 | |||||||||| ||||| || | | |||||||||||||||| Sbjct: 73924 ggagcaaaatgattgaatctatactctaaagtatgtctatat 73965 Score = 65.9 bits (33), Expect = 8e-08 Identities = 51/57 (89%) Strand = Plus / Minus Query: 116 tactccctcggttcctaaatataagtcttttaaaagatttcactaggggtctacata 172 ||||||||| |||||||||||||||||||| | |||||||||||| || ||||||| Sbjct: 90894 tactccctccgttcctaaatataagtctttgtagagatttcactagtggactacata 90838 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 116 tactccctcggttcctaaatataagtcttttaaaagatttcacta 160 ||||||||| |||||||||||||||||||| | ||||||||||| Sbjct: 71854 tactccctccgttcctaaatataagtctttctagagatttcacta 71810 Score = 56.0 bits (28), Expect = 8e-05 Identities = 43/48 (89%) Strand = Plus / Plus Query: 210 ctatatacatccgtatatagtccattagtgaaacctttaaaaagactt 257 |||||||||||||||| ||||||| |||||||| || || |||||||| Sbjct: 90825 ctatatacatccgtatgtagtccactagtgaaatctctacaaagactt 90872
>gb|DQ324801.1| Hordeum vulgare subsp. vulgare germin B (GerB) gene, promoter and partial cds Length = 1326 Score = 109 bits (55), Expect = 6e-21 Identities = 100/115 (86%) Strand = Plus / Plus Query: 116 tactccctcggttcctaaatataagtcttttaaaagatttcactaggggtctacatatga 175 ||||||||| ||| ||||||||||||||||||| | |||||| ||| ||||||||| | Sbjct: 88 tactccctccgtttctaaatataagtcttttaagatatttcagtagaagtctacatacgg 147 Query: 176 agcaaaatgaatgaatatacattttaaagtatgtctatatacatccgtatatagt 230 |||||||||| | ||| |||||| |||||||||||||||| ||||||||| |||| Sbjct: 148 agcaaaatgagttaatctacattgtaaagtatgtctatatgcatccgtatgtagt 202 Score = 44.1 bits (22), Expect = 0.30 Identities = 28/30 (93%) Strand = Plus / Minus Query: 116 tactccctcggttcctaaatataagtcttt 145 ||||||||| ||||||||||||||| |||| Sbjct: 251 tactccctccgttcctaaatataagacttt 222
>gb|DQ201147.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo phytochrome C (PhyC 1a) pseudogene, complete sequence Length = 1112 Score = 107 bits (54), Expect = 2e-20 Identities = 90/102 (88%) Strand = Plus / Plus Query: 114 actactccctcggttcctaaatataagtcttttaaaagatttcactaggggtctacatat 173 ||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||| Sbjct: 815 actactccctccgttcctaaatataagtcttttaagcgatttcactaagggtctacattc 874 Query: 174 gaagcaaaatgaatgaatatacattttaaagtatgtctatat 215 | |||||||||| ||||| || | | |||||||||||||||| Sbjct: 875 ggagcaaaatgattgaatctatactctaaagtatgtctatat 916
>gb|AY972619.1| Hordeum vulgare subsp. vulgare cultivar Morex subclone NRG098 cyclic nucleotide-gated ion channel 4 (Nec1) gene, complete cds Length = 9090 Score = 105 bits (53), Expect = 1e-19 Identities = 110/129 (85%) Strand = Plus / Minus Query: 114 actactccctcggttcctaaatataagtcttttaaaagatttcactaggggtctacatat 173 |||||||| || |||||||||||||||||||| || | ||||||||| | |||||||| Sbjct: 8530 actactccatccgttcctaaatataagtctttaaagatatttcactaagaatctacatac 8471 Query: 174 gaagcaaaatgaatgaatatacattttaaagtatgtctatatacatccgtatatagtcca 233 | | |||||||| ||||| |||| | |||| ||||||||||||||||||||| ||||| | Sbjct: 8470 ggaccaaaatgagtgaatctacactctaaaatatgtctatatacatccgtatgtagtcta 8411 Query: 234 ttagtgaaa 242 ||| ||||| Sbjct: 8410 ttaatgaaa 8402 Score = 61.9 bits (31), Expect = 1e-06 Identities = 82/99 (82%) Strand = Plus / Plus Query: 132 aaatataagtcttttaaaagatttcactaggggtctacatatgaagcaaaatgaatgaat 191 ||||||||| | ||| ||||||| |||||| | ||| ||| | | |||||||||||||| Sbjct: 200 aaatataagaccttttaaagattccactagaagactatatacggaacaaaatgaatgaat 259 Query: 192 atacattttaaagtatgtctatatacatccgtatatagt 230 || | |||||| ||||||||| ||||||||||| |||| Sbjct: 260 ctatactttaaaatatgtctatgtacatccgtatgtagt 298 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Plus Query: 116 tactccctcggttcctaaatataagtcttttaaaagatttca 157 ||||||||| |||||||||||||||| ||| || |||||||| Sbjct: 8365 tactccctccgttcctaaatataagtttttaaagagatttca 8406 Score = 50.1 bits (25), Expect = 0.005 Identities = 40/45 (88%) Strand = Plus / Minus Query: 116 tactccctcggttcctaaatataagtcttttaaaagatttcacta 160 ||||||||| ||||||||||||||| ||||| | ||||| ||||| Sbjct: 346 tactccctccgttcctaaatataagactttttagagattgcacta 302 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 129 cctaaatataagtcttttaaaagatttca 157 ||||||||||||||||| || |||||||| Sbjct: 8245 cctaaatataagtctttaaagagatttca 8273 Score = 40.1 bits (20), Expect = 4.7 Identities = 47/56 (83%) Strand = Plus / Minus Query: 187 tgaatatacattttaaagtatgtctatatacatccgtatatagtccattagtgaaa 242 ||||| |||| | |||| ||||||||||||||| |||| ||||| |||| ||||| Sbjct: 8324 tgaatctacactctaaaatatgtctatatacatttgtatgtagtctattaatgaaa 8269
>gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5-bisphosphate carboxylase activase (RcaB) gene, complete cds; and ribulose 1,5-bisphosphate carboxylase activase (RcaA) gene, alternatively spliced, complete cds Length = 8766 Score = 99.6 bits (50), Expect = 6e-18 Identities = 120/142 (84%), Gaps = 1/142 (0%) Strand = Plus / Minus Query: 116 tactccctcggttcctaaatataagtcttttaaaagatttcactaggggtctacatatga 175 ||||||||| |||| |||||||||||||||||| ||||||| | | ||||||| | Sbjct: 6361 tactccctctgttcttaaatataagtcttttaagcgatttcatcaagaaactacatacaa 6302 Query: 176 agcaaaatgaatgaatatacattttaaagtatgtctatatacatccgtatatagtccatt 235 | ||||| |||||||| |||| | |||||||||||||||||||||||||| |||||| || Sbjct: 6301 aacaaaaagaatgaatctacactctaaagtatgtctatatacatccgtatgtagtcc-tt 6243 Query: 236 agtgaaacctttaaaaagactt 257 ||||||| || ||||| ||||| Sbjct: 6242 agtgaaatctctaaaatgactt 6221 Score = 46.1 bits (23), Expect = 0.076 Identities = 41/47 (87%) Strand = Plus / Plus Query: 114 actactccctcggttcctaaatataagtcttttaaaagatttcacta 160 ||||||||||| ||||| |||||||||| ||| | ||||||||||| Sbjct: 6197 actactccctccgttccataatataagtcattttagagatttcacta 6243
>gb|AY642925.1| Hordeum vulgare BAC 124C9, complete sequence Length = 12258 Score = 93.7 bits (47), Expect = 4e-16 Identities = 98/115 (85%) Strand = Plus / Minus Query: 131 taaatataagtcttttaaaagatttcactaggggtctacatatgaagcaaaatgaatgaa 190 |||||||||||||||||| | |||| | ||| ||||| ||| ||| |||||| |||||| Sbjct: 3896 taaatataagtcttttaagatattttattagaagtctatatacgaaacaaaataaatgaa 3837 Query: 191 tatacattttaaagtatgtctatatacatccgtatatagtccattagtgaaacct 245 | || | |||||| ||||||||||||||||||||| ||||||| || |||||||| Sbjct: 3836 tctatactttaaaatatgtctatatacatccgtatgtagtccactaatgaaacct 3782
>gb|DQ154923.1| Hordeum vulgare RAB7 (RAB7) gene, exons 1 through 6 and partial cds; and delta-1-pyrroline-5-carboxylate dehydrogenase (P5CDH) gene, complete cds Length = 13878 Score = 93.7 bits (47), Expect = 4e-16 Identities = 99/115 (86%), Gaps = 1/115 (0%) Strand = Plus / Minus Query: 116 tactccctcggttcctaaatataagtcttttaaaagatttcactaggggtctacatatga 175 ||||| ||| ||||||||||||||||||||| | ||||| ||||| || ||||||| | Sbjct: 7574 tactcactccgttcctaaatataagtctttttagagattacactatgga-ctacatacaa 7516 Query: 176 agcaaaatgaatgaatatacattttaaagtatgtctatatacatccgtatatagt 230 |||||||||| || || |||| | |||||||||||||||||||||||||| |||| Sbjct: 7515 agcaaaatgagtgcatctacactctaaagtatgtctatatacatccgtatgtagt 7461 Score = 42.1 bits (21), Expect = 1.2 Identities = 39/45 (86%) Strand = Plus / Plus Query: 116 tactccctcggttcctaaatataagtcttttaaaagatttcacta 160 ||||||||| |||||||||||| ||||||| | ||||| ||||| Sbjct: 7413 tactccctccattcctaaatataggtctttttagagattccacta 7457
>dbj|AB058924.1| Hordeum vulgare gene for protein kinase HvPKABA1, complete cds, cultivar:Igri Length = 11684 Score = 93.7 bits (47), Expect = 4e-16 Identities = 102/119 (85%), Gaps = 1/119 (0%) Strand = Plus / Plus Query: 116 tactccctcggttcctaaatataagtcttttaaaagatttcactaggggtctacatatga 175 ||||||||| ||||||||||| ||||| ||| ||||||||||||| | ||||||| || Sbjct: 7402 tactccctccgttcctaaatacaagtccttttaaagatttcactataga-ctacatacga 7460 Query: 176 agcaaaatgaatgaatatacattttaaagtatgtctatatacatccgtatatagtccat 234 |||||||||| | ||| |||||| ||||||||| |||||||||| |||| |||||||| Sbjct: 7461 agcaaaatgagttaatctacattctaaagtatggttatatacatctgtatgtagtccat 7519 Score = 54.0 bits (27), Expect = 3e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 116 tactccctcggttcctaaatataagtctttt 146 ||||||||| ||||||||||||||||||||| Sbjct: 7564 tactccctccgttcctaaatataagtctttt 7534
>gb|AF308474.1|AF308474 Hordeum vulgare asparaginase gene, complete cds Length = 2659 Score = 91.7 bits (46), Expect = 1e-15 Identities = 119/142 (83%), Gaps = 1/142 (0%) Strand = Plus / Minus Query: 116 tactccctcggttcctaaatataagtcttttaaaagatttcactaggggtctacatatga 175 ||||||||| |||| ||||||||| |||||||| ||| |||||||| | |||||| Sbjct: 1607 tactccctccgttcttaaatataaatcttttaagagacttcactagtgaactacatgcag 1548 Query: 176 agcaaaatgaatgaatatacattttaaagtatgtctatatacatccgtatatagtccatt 235 | |||||||||||||| |||| | ||||||||||||||||| |||||||| |||| | Sbjct: 1547 aacaaaatgaatgaatgtacactctaaagtatgtctatataaatccgtatgtagt-ttct 1489 Query: 236 agtgaaacctttaaaaagactt 257 | |||||||||||||||||||| Sbjct: 1488 aatgaaacctttaaaaagactt 1467 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Plus Query: 116 tactccctcggttcctaaatataagtcttttaaaagatttca 157 ||||||||| |||||||||||||||||||| |||| ||||| Sbjct: 1445 tactccctccattcctaaatataagtctttttaaaggtttca 1486
>gb|DQ351213.1| Hordeum vulgare subsp. vulgare resistance protein (ABC1037) gene, complete cds Length = 25080 Score = 91.7 bits (46), Expect = 1e-15 Identities = 94/110 (85%) Strand = Plus / Minus Query: 116 tactccctcggttcctaaatataagtcttttaaaagatttcactaggggtctacatatga 175 ||||||||| | ||||||||||||||||||| | ||||||||||| | | ||||||| | Sbjct: 22020 tactccctccgatcctaaatataagtctttttagagatttcactaagtgactacatacgt 21961 Query: 176 agcaaaatgaatgaatatacattttaaagtatgtctatatacatccgtat 225 || |||||| |||||| | |||| |||||||||| |||||||||||||| Sbjct: 21960 agtaaaatgcatgaatgtgcattccaaagtatgtccatatacatccgtat 21911 Score = 69.9 bits (35), Expect = 5e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 115 ctactccctcggttcctaaatataagtcttttaaaagatttcactag 161 |||||||||| |||||||||||||||||||| || |||||||||||| Sbjct: 21856 ctactccctctgttcctaaatataagtctttaaagagatttcactag 21902 Score = 61.9 bits (31), Expect = 1e-06 Identities = 67/79 (84%) Strand = Plus / Minus Query: 152 atttcactaggggtctacatatgaagcaaaatgaatgaatatacattttaaagtatgtct 211 |||||||||| | ||||||| |||||||||||| ||||| || | | |||| ||||||| Sbjct: 5492 atttcactagaagactacatacgaagcaaaatgagtgaatctatactctaaaatatgtct 5433 Query: 212 atatacatccgtatatagt 230 || ||||||||||| |||| Sbjct: 5432 atgtacatccgtatgtagt 5414 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Plus Query: 115 ctactccctcggttcctaaatataag 140 |||||||||| ||||||||||||||| Sbjct: 5365 ctactccctccgttcctaaatataag 5390
>gb|AY268139.1| Hordeum vulgare BAC 184G9, complete sequece Length = 120562 Score = 79.8 bits (40), Expect = 5e-12 Identities = 88/104 (84%) Strand = Plus / Plus Query: 116 tactccctcggttcctaaatataagtcttttaaaagatttcactaggggtctacatatga 175 |||| |||| |||||||||||||| | |||| |||||||| | || | | ||| ||| || Sbjct: 27437 tacttcctccgttcctaaatataaatatttttaaagattttattatgagactatatacga 27496 Query: 176 agcaaaatgaatgaatatacattttaaagtatgtctatatacat 219 ||||||||||||||| |||| |||||| ||||||||||||||| Sbjct: 27497 agcaaaatgaatgaacctacactttaaattatgtctatatacat 27540
>gb|DQ469712.1| Hordeum vulgare subsp. vulgare serine/threonine kinase-like protein ABC1036 gene, complete cds Length = 29663 Score = 79.8 bits (40), Expect = 5e-12 Identities = 88/104 (84%) Strand = Plus / Plus Query: 116 tactccctcggttcctaaatataagtcttttaaaagatttcactaggggtctacatatga 175 ||||||||| ||||||||| || |||||| | ||||| ||||||||| ||||||| || Sbjct: 17081 tactccctccattcctaaatgtatatctttttagagattccactaggggactacatacga 17140 Query: 176 agcaaaatgaatgaatatacattttaaagtatgtctatatacat 219 |||||| ||| ||||| || | ||||||| |||||||||||||| Sbjct: 17141 agcaaagtgagtgaatctatactttaaagcatgtctatatacat 17184
>gb|AY821693.1| Australopyrum velutinum beta amylase gene, partial cds; and Stowaway MITE, complete sequence Length = 1595 Score = 77.8 bits (39), Expect = 2e-11 Identities = 100/119 (84%), Gaps = 1/119 (0%) Strand = Plus / Minus Query: 116 tactccctcggttcctaaatataagtcttttaaaagatttcactaggggtctacatatga 175 ||||||||| ||||||||||||||||||||| | ||||| | || || ||||||| | Sbjct: 1377 tactccctctgttcctaaatataagtctttttagagattctaata-tggactacatacgg 1319 Query: 176 agcaaaatgaatgaatatacattttaaagtatgtctatatacatccgtatatagtccat 234 |||||||||| ||||| |||| | |||| || |||||||| ||||||||| |||||||| Sbjct: 1318 agcaaaatgagtgaatctacactctaaaatacgtctatattcatccgtatgtagtccat 1260 Score = 56.0 bits (28), Expect = 8e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 116 tactccctcggttcctaaatataagtcttttaaaagattt 155 ||||||||| ||||||||||||||||||||| | |||||| Sbjct: 1216 tactccctccgttcctaaatataagtctttttagagattt 1255
>emb|AJ272313.1|HVU272313 Hordeum vulgare mRNA for gamma tubulin (gtub gene) Length = 2039 Score = 77.8 bits (39), Expect = 2e-11 Identities = 69/79 (87%) Strand = Plus / Plus Query: 110 gtaaactactccctcggttcctaaatataagtcttttaaaagatttcactaggggtctac 169 |||| ||||||| || ||||||||||||||||||||| | | |||||| |||||| || Sbjct: 1900 gtaatctactccatccgttcctaaatataagtctttttagacatttcaataggggactgt 1959 Query: 170 atatgaagcaaaatgaatg 188 ||||||||||||||||||| Sbjct: 1960 atatgaagcaaaatgaatg 1978
>gb|AF334758.1|AF334758 Hordeum vulgare homeodomain protein JUBEL1 (JuBel1) gene, complete cds Length = 13757 Score = 77.8 bits (39), Expect = 2e-11 Identities = 90/107 (84%) Strand = Plus / Plus Query: 126 gttcctaaatataagtcttttaaaagatttcactaggggtctacatatgaagcaaaatga 185 ||||| ||||||||||||| | ||||||||||||||| | ||||||| |||||||||||| Sbjct: 11659 gttccaaaatataagtcttcttaaagatttcactaggagactacatacgaagcaaaatga 11718 Query: 186 atgaatatacattttaaagtatgtctatatacatccgtatatagtcc 232 | ||| |||| | |||| | |||||||| |||| |||| |||||| Sbjct: 11719 gtaaatttacactctaaattgtgtctataaacatatgtatgtagtcc 11765 Score = 50.1 bits (25), Expect = 0.005 Identities = 40/45 (88%) Strand = Plus / Minus Query: 116 tactccctcggttcctaaatataagtcttttaaaagatttcacta 160 |||||||||||||||||||| | |||||||| | |||||| |||| Sbjct: 11564 tactccctcggttcctaaatgttagtctttttagagattttacta 11520
>dbj|D50641.1| Hordeum vulgare DNA for plant metallothionein-like protein, complete cds Length = 1819 Score = 77.8 bits (39), Expect = 2e-11 Identities = 97/115 (84%), Gaps = 1/115 (0%) Strand = Plus / Plus Query: 116 tactccctcggttcctaaatataagtcttttaaaagatttcactaggggtctacatatga 175 ||||||||| ||| ||||||||||||||| |||||||| | || | |||||||||| Sbjct: 318 tactccctccgtttttaaatataagtctttataaagattttattatgaa-ctacatatga 376 Query: 176 agcaaaatgaatgaatatacattttaaagtatgtctatatacatccgtatatagt 230 |||||||||| ||| | || | ||||| |||||||||||||||||||||||||| Sbjct: 377 agcaaaatgattgattttatacattaaaatatgtctatatacatccgtatatagt 431 Score = 46.1 bits (23), Expect = 0.076 Identities = 32/35 (91%) Strand = Plus / Minus Query: 126 gttcctaaatataagtcttttaaaagatttcacta 160 |||||||||||||||||||| ||| ||||||||| Sbjct: 469 gttcctaaatataagtctttacaaaaatttcacta 435
>gb|AF474373.1| Hordeum vulgare subsp. vulgare BAC 259I16, complete sequence Length = 124050 Score = 75.8 bits (38), Expect = 8e-11 Identities = 53/58 (91%) Strand = Plus / Plus Query: 200 taaagtatgtctatatacatccgtatatagtccattagtgaaacctttaaaaagactt 257 |||||||||||||||||||||||||| |||||| ||||||||| | ||||||||||| Sbjct: 52395 taaagtatgtctatatacatccgtatgtagtcccctagtgaaacatctaaaaagactt 52452 Score = 69.9 bits (35), Expect = 5e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 114 actactccctcggttcctaaatataagtcttttaaaagatttcactaggggtctacata 172 ||||||||||| ||||||||||||||||||||| | | |||||||||||| ||||||| Sbjct: 52476 actactccctccgttcctaaatataagtctttttagatgtttcactaggggactacata 52418 Score = 63.9 bits (32), Expect = 3e-07 Identities = 84/100 (84%), Gaps = 1/100 (1%) Strand = Plus / Minus Query: 118 ctccctcggttcctaaatataagtcttttaaaagatttcactaggggtctacatatgaag 177 ||||||| ||| ||||||| ||||||||||| |||||| ||||| | ||||||| ||| Sbjct: 69794 ctccctccgtttctaaata-aagtcttttaagagattttactagcgaactacatacgaaa 69736 Query: 178 caaaatgaatgaatatacattttaaagtatgtctatatac 217 ||||||||| ||| |||| | ||||||||||||| |||| Sbjct: 69735 taaaatgaataaatttacactctaaagtatgtctacatac 69696 Score = 54.0 bits (27), Expect = 3e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 116 tactccctcggttcctaaatataagtctttt 146 ||||||||| ||||||||||||||||||||| Sbjct: 57344 tactccctccgttcctaaatataagtctttt 57374
>dbj|AB182944.1| Triticum aestivum Wknox1b gene for KN1 homeobox protein, complete cds Length = 10847 Score = 75.8 bits (38), Expect = 8e-11 Identities = 92/110 (83%) Strand = Plus / Minus Query: 116 tactccctcggttcctaaatataagtcttttaaaagatttcactaggggtctacatatga 175 ||||||||| |||||||||||| |||||| |||||||||| | | | ||||||| | Sbjct: 7867 tactccctccgttcctaaatatttgtctttataaagatttcaacaagtgactacatacgg 7808 Query: 176 agcaaaatgaatgaatatacattttaaagtatgtctatatacatccgtat 225 |||||||||| ||||| |||| | |||| | ||||||||||||||||||| Sbjct: 7807 agcaaaatgagtgaatctacactctaaaatgtgtctatatacatccgtat 7758
>gb|AF022725.1|AF022725 Hordeum vulgare limit dextrinase (HvLD99) gene, complete cds Length = 12034 Score = 73.8 bits (37), Expect = 3e-10 Identities = 103/123 (83%), Gaps = 4/123 (3%) Strand = Plus / Plus Query: 112 aaactactccctcggttcctaaatataagtcttttaaaagatttcactaggggtctacat 171 |||||||||||||||||||| ||||||||| ||| | ||||| ||||| || ||| || Sbjct: 3558 aaactactccctcggttccttaatataagtatttctagagattccactatgga-ctatat 3616 Query: 172 atgaagcaaaatgaatgaatatacattttaaagtatgtctatatacatccgtatatagtc 231 | | |||||||||| |||| |||| | |||||||||||||||||||||||| ||||| Sbjct: 3617 acggagcaaaatgagtgaacctacact---aagtatgtctatatacatccgtatgtagtc 3673 Query: 232 cat 234 ||| Sbjct: 3674 cat 3676 Score = 46.1 bits (23), Expect = 0.076 Identities = 29/31 (93%) Strand = Plus / Minus Query: 116 tactccctcggttcctaaatataagtctttt 146 ||||||||| ||||||||||| ||||||||| Sbjct: 3720 tactccctccgttcctaaatacaagtctttt 3690
>gb|AF536819.1| Triticum aestivum ADP glucose pyrophosphorylase gene, partial cds, alternatively spliced Length = 2512 Score = 71.9 bits (36), Expect = 1e-09 Identities = 93/112 (83%) Strand = Plus / Plus Query: 116 tactccctcggttcctaaatataagtcttttaaaagatttcactaggggtctacatatga 175 ||||||||| ||||||||||||| |||||| | |||||||| | | | ||| ||| | Sbjct: 383 tactccctccgttcctaaatataggtctttgtagagatttcaacaagtgactatatacgg 442 Query: 176 agcaaaatgaatgaatatacattttaaagtatgtctatatacatccgtatat 227 |||||||||| ||||| |||| | |||| || |||||||||||||||||||| Sbjct: 443 agcaaaatgagtgaatctacactctaaaatacgtctatatacatccgtatat 494 Score = 40.1 bits (20), Expect = 4.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 126 gttcctaaatataagtcttttaaaagatttca 157 ||||||||||| ||||||||| | |||||||| Sbjct: 537 gttcctaaatacaagtctttttagagatttca 506
>gb|M62740.1|BLYGLB2 Hordeum vulgare 1,3-1,4-beta-D glucan 4-glucanohydrolase (Glb 2) gene, intron 1 Length = 5159 Score = 71.9 bits (36), Expect = 1e-09 Identities = 83/96 (86%), Gaps = 2/96 (2%) Strand = Plus / Plus Query: 130 ctaaatataagtcttttaaaagatttcactaggggtctacatatgaagcaaaatgaatga 189 ||||||||||| |||| | |||||||| |||| | ||||||| |||||||||||| ||| Sbjct: 1213 ctaaatataaggttttttagagatttcattaggagactacatacgaagcaaaatga-tga 1271 Query: 190 atatacattttaaagtatgtctatatacatccgtat 225 || || | |||||||| ||||||||||||||||||| Sbjct: 1272 at-tataatttaaagtgtgtctatatacatccgtat 1306
>emb|Y10814.1|HVPRP4 H.vulgare mRNA for pathogenic related protein 4 Length = 728 Score = 69.9 bits (35), Expect = 5e-09 Identities = 59/67 (88%) Strand = Plus / Plus Query: 116 tactccctcggttcctaaatataagtcttttaaaagatttcactaggggtctacatatga 175 ||||||||| || ||||||||||||||||||| | ||||||||| | ||||| |||||| Sbjct: 638 tactccctccgtatctaaatataagtcttttaagatatttcactaagtgtctatatatga 697 Query: 176 agcaaaa 182 ||||||| Sbjct: 698 agcaaaa 704
>gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxylase, ZCCT2, ZCCT1, and SNF2P genes, complete cds; nucellin pseudogene, complete sequence; putative transposase, phosphatidylinositol phosphatidylcholine transfer protein sec14 cytosolic-like protein, and phytochrome P450-like protein genes, complete cds; and unknown genes Length = 438828 Score = 67.9 bits (34), Expect = 2e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 178 caaaatgaatgaatatacattttaaagtatgtctatatacatccgtatat 227 |||||||||||||| ||||||||||| |||||||| |||||| ||||||| Sbjct: 355570 caaaatgaatgaatctacattttaaaatatgtctacatacattcgtatat 355619 Score = 48.1 bits (24), Expect = 0.019 Identities = 30/32 (93%) Strand = Plus / Plus Query: 126 gttcctaaatataagtcttttaaaagatttca 157 ||||||||||||||||||||| | |||||||| Sbjct: 260168 gttcctaaatataagtctttttagagatttca 260199
>gb|DQ201148.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo phytochrome C (PhyC 1b) pseudogene, complete sequence Length = 1147 Score = 65.9 bits (33), Expect = 8e-08 Identities = 51/57 (89%) Strand = Plus / Minus Query: 116 tactccctcggttcctaaatataagtcttttaaaagatttcactaggggtctacata 172 ||||||||| |||||||||||||||||||| | |||||||||||| || ||||||| Sbjct: 440 tactccctccgttcctaaatataagtctttgtagagatttcactagtggactacata 384 Score = 56.0 bits (28), Expect = 8e-05 Identities = 43/48 (89%) Strand = Plus / Plus Query: 210 ctatatacatccgtatatagtccattagtgaaacctttaaaaagactt 257 |||||||||||||||| ||||||| |||||||| || || |||||||| Sbjct: 371 ctatatacatccgtatgtagtccactagtgaaatctctacaaagactt 418
>gb|AF338431.1|AF338431 Aegilops tauschii starch branching enzyme IIa gene, complete cds Length = 11475 Score = 65.9 bits (33), Expect = 8e-08 Identities = 70/81 (86%), Gaps = 1/81 (1%) Strand = Plus / Minus Query: 116 tactccctcggttcctaaatataagtcttttaaaagatttcactaggggtctacatatga 175 ||||||||| |||||||||||||||||| | | ||||||||||| || ||||||| || Sbjct: 8723 tactccctccgttcctaaatataagtctctgtagagatttcacta-tggactacatacga 8665 Query: 176 agcaaaatgaatgaatataca 196 |||||||||| ||||| |||| Sbjct: 8664 agcaaaatgagtgaatctaca 8644 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Plus Query: 116 tactccctcggttcctaaatataagtcttt 145 ||||||||| |||||||||||||||||||| Sbjct: 8567 tactccctccgttcctaaatataagtcttt 8596
>gb|AF122050.1|AF122050 Hordeum vulgare limit dextrinase gene, complete cds Length = 11462 Score = 65.9 bits (33), Expect = 8e-08 Identities = 102/123 (82%), Gaps = 4/123 (3%) Strand = Plus / Plus Query: 112 aaactactccctcggttcctaaatataagtcttttaaaagatttcactaggggtctacat 171 |||||||||||||||||||| ||||||||| ||| | ||||| ||||| || | | || Sbjct: 3498 aaactactccctcggttccttaatataagtatttctagagattccactatggacc-atat 3556 Query: 172 atgaagcaaaatgaatgaatatacattttaaagtatgtctatatacatccgtatatagtc 231 | | |||||||||| |||| |||| | |||||||||||||||||||||||| ||||| Sbjct: 3557 acggagcaaaatgagtgaacctacact---aagtatgtctatatacatccgtatgtagtc 3613 Query: 232 cat 234 ||| Sbjct: 3614 cat 3616 Score = 54.0 bits (27), Expect = 3e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 116 tactccctcggttcctaaatataagtctttt 146 ||||||||| ||||||||||||||||||||| Sbjct: 3660 tactccctccgttcctaaatataagtctttt 3630
>gb|AY641411.1| Hordeum vulgare subsp. vulgare Rph15.1 (Rph15.1) pseudogene, complete cds Length = 15688 Score = 63.9 bits (32), Expect = 3e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 113 aactactccctcggttcctaaatataagtcttttaaaagatttcacta 160 |||||||||||| ||||||||||||||||||||| | ||||| ||||| Sbjct: 8718 aactactccctcagttcctaaatataagtctttttagagattccacta 8765 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Minus Query: 120 ccctcggttcctaaatataagtcttttaaaagatttca 157 ||||| ||||||||||||||||||||| ||| |||||| Sbjct: 8882 ccctccgttcctaaatataagtcttttcaaacatttca 8845 Score = 50.1 bits (25), Expect = 0.005 Identities = 70/85 (82%) Strand = Plus / Minus Query: 131 taaatataagtcttttaaaagatttcactaggggtctacatatgaagcaaaatgaatgaa 190 |||||||||||| | | |||||||||| ||| | ||| ||| | | ||||||||||||| Sbjct: 15201 taaatataagtcgtattaaagatttcattagagaactatatacggaacaaaatgaatgaa 15142 Query: 191 tatacattttaaagtatgtctatat 215 | |||| | |||| ||||||||||| Sbjct: 15141 tctacactctaaaatatgtctatat 15117
>gb|AF182197.1|AF182197 Hordeum vulgare RNase S-like protein precursor (rsh1) gene, complete cds Length = 3758 Score = 63.9 bits (32), Expect = 3e-07 Identities = 63/72 (87%), Gaps = 1/72 (1%) Strand = Plus / Plus Query: 186 atgaatatacattttaaagtatgtctatatacatccgtatatagtccattagtgaaacct 245 |||||| |||| | |||| |||||||||||||||||||||||||||| ||||| || || Sbjct: 2063 atgaatctacaatctaaaatatgtctatatacatccgtatatagtcc-gtagtggaatct 2121 Query: 246 ttaaaaagactt 257 ||||||| |||| Sbjct: 2122 ttaaaaatactt 2133 Score = 42.1 bits (21), Expect = 1.2 Identities = 42/48 (87%), Gaps = 2/48 (4%) Strand = Plus / Minus Query: 115 ctactccctcggttcctaa--atataagtcttttaaaagatttcacta 160 |||||||||| |||||||| |||||||| |||| ||||||| ||||| Sbjct: 2158 ctactccctccgttcctaaatatataagtatttttaaagattccacta 2111
>gb|AY821692.1| Australopyrum retrofractum beta amylase gene, partial cds; and Stowaway MITE, complete sequence Length = 1602 Score = 61.9 bits (31), Expect = 1e-06 Identities = 92/111 (82%), Gaps = 1/111 (0%) Strand = Plus / Minus Query: 120 ccctcggttcctaaatataagtcttttaaaagatttcactaggggtctacatatgaagca 179 ||||| ||||||||||||||||||||| | ||||| | || || ||||||| | |||| Sbjct: 1379 ccctctgttcctaaatataagtctttttagagattctaata-tggactacatacggagca 1321 Query: 180 aaatgaatgaatatacattttaaagtatgtctatatacatccgtatatagt 230 |||||| ||||| |||| | |||| || |||||||| ||||||||| |||| Sbjct: 1320 aaatgagtgaatctacactctaaaatacgtctatattcatccgtatgtagt 1270 Score = 56.0 bits (28), Expect = 8e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 116 tactccctcggttcctaaatataagtcttttaaaagattt 155 ||||||||| ||||||||||||||||||||| | |||||| Sbjct: 1222 tactccctccgttcctaaatataagtctttttagagattt 1261
>gb|AY643844.1|AY643842S3 Hordeum vulgare subsp. vulgare clones BAC 799C8 and 122A5 hardness locus region Length = 160897 Score = 60.0 bits (30), Expect = 5e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 114 actactccctcggttcctaaatataagtctttta 147 ||||||||||| |||||||||||||||||||||| Sbjct: 148726 actactccctccgttcctaaatataagtctttta 148693 Score = 46.1 bits (23), Expect = 0.076 Identities = 47/55 (85%) Strand = Plus / Plus Query: 175 aagcaaaatgaatgaatatacattttaaagtatgtctatatacatccgtatatag 229 |||| |||| ||||||| || | |||||| ||||||||||||||| | ||||||| Sbjct: 148621 aagcgaaataaatgaatctataatttaaactatgtctatatacattcttatatag 148675
>gb|AY534123.1|SEG_AY534122S2 Aegilops tauschii transposons Caspar, XJ, Angela, and XJ, complete sequence; LRR protein WM1.7 (WM1.7) and LRR protein WM1.12 (WM1.12) genes, complete cds; transposons Ophelia2, Angela3s, and XJ3, complete sequence; LRR protein WM1.3 (WM1.3) gene, complete cds; Stowaway MITE, transposons XJ1, Jody, Angela, and XJ and Stowaway MITE, complete sequence; LRR protein WM1.2 (WM1.2) and LLR protein WM1.1 (WM1.1) genes, complete cds; transposons XJ, XA, Angela, and Fred and WM1.11 gene, complete sequence; RPM1-like sequence and LRR protein WM1.10 (WM1.10) genes, complete cds; and transposon XJ, complete sequence Length = 198649 Score = 60.0 bits (30), Expect = 5e-06 Identities = 87/106 (82%) Strand = Plus / Minus Query: 116 tactccctcggttcctaaatataagtcttttaaaagatttcactaggggtctacatatga 175 ||||||||| ||||||||||| |||||| | |||||||| | | | ||||||| | Sbjct: 70117 tactccctccattcctaaatatttgtctttctagagatttcaacaagtgactacatacgg 70058 Query: 176 agcaaaatgaatgaatatacattttaaagtatgtctatatacatcc 221 |||||||||| ||||| |||| | |||| ||||||||||||||||| Sbjct: 70057 agcaaaatgagtgaatctacactctaaaatatgtctatatacatcc 70012 Score = 44.1 bits (22), Expect = 0.30 Identities = 37/42 (88%) Strand = Plus / Plus Query: 116 tactccctcggttcctaaatataagtcttttaaaagatttca 157 ||||||||| |||||||||||| ||||||| | |||||||| Sbjct: 69953 tactccctccgttcctaaatatttgtctttttagagatttca 69994
>gb|AY643843.1|AY643842S2 Hordeum vulgare subsp. vulgare clones BAC 519K7 and 799C8 hardness locus region Length = 129099 Score = 58.0 bits (29), Expect = 2e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 166 ctacatatgaagcaaaatgaatgaatatacattttaaagtatgtctatatacatccgtat 225 ||||||| ||| ||||| | |||||||| | |||||| |||||||||||||||| |||| Sbjct: 30751 ctacatacgaaacaaaacaagtgaatatatactttaaaatatgtctatatacatctgtat 30810 Query: 226 atagt 230 ||||| Sbjct: 30811 atagt 30815
>gb|AY972629.1| Hordeum vulgare subsp. vulgare cultivar Morex subclone NRG095 cyclic nucleotide-gated ion channel 1 (CNGC1) gene, partial cds Length = 5200 Score = 58.0 bits (29), Expect = 2e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 117 actccctcggttcctaaatataagtcttttaaa 149 |||||||| |||||||||||||||||||||||| Sbjct: 2768 actccctctgttcctaaatataagtcttttaaa 2800
>gb|AY951945.1| Triticum monococcum TmBAC 60J11 FR-Am2 locus, genomic sequence Length = 103866 Score = 56.0 bits (28), Expect = 8e-05 Identities = 31/32 (96%) Strand = Plus / Plus Query: 114 actactccctcggttcctaaatataagtcttt 145 ||||||||||| |||||||||||||||||||| Sbjct: 23110 actactccctccgttcctaaatataagtcttt 23141 Score = 52.0 bits (26), Expect = 0.001 Identities = 89/110 (80%) Strand = Plus / Minus Query: 116 tactccctcggttcctaaatataagtcttttaaaagatttcactaggggtctacatatga 175 ||||||||| |||||||||||||||||||| | ||||| | | | | ||||||| Sbjct: 51932 tactccctccgttcctaaatataagtctttctagagattctaacaagcgactacatacat 51873 Query: 176 agcaaaatgaatgaatatacattttaaagtatgtctatatacatccgtat 225 || ||||||||||||| || | | |||| ||||||||| ||||||||||| Sbjct: 51872 agtaaaatgaatgaatctatactctaaaatatgtctatgtacatccgtat 51823 Score = 52.0 bits (26), Expect = 0.001 Identities = 32/34 (94%) Strand = Plus / Plus Query: 113 aactactccctcggttcctaaatataagtctttt 146 ||||||||| || ||||||||||||||||||||| Sbjct: 51765 aactactccttccgttcctaaatataagtctttt 51798 Score = 50.1 bits (25), Expect = 0.005 Identities = 40/45 (88%) Strand = Plus / Minus Query: 116 tactccctcggttcctaaatataagtcttttaaaagatttcacta 160 |||| |||| |||||||||||||||||||| | ||||||||||| Sbjct: 23272 tacttcctccgttcctaaatataagtctttgtagagatttcacta 23228
>gb|AF277239.1|AF277239 Heteranthelium piliferum isolate H5557 disrupted meiotic cDNA 1 protein (DMC1) gene, partial cds Length = 1293 Score = 56.0 bits (28), Expect = 8e-05 Identities = 52/60 (86%) Strand = Plus / Minus Query: 166 ctacatatgaagcaaaatgaatgaatatacattttaaagtatgtctatatacatccgtat 225 ||||||| |||| ||||||| | ||| |||| | |||| ||||||||||||||||||||| Sbjct: 1030 ctacatacgaagtaaaatgagttaatctacactctaaaatatgtctatatacatccgtat 971
>emb|X81368.1|TAAWJL175 T.aestivumn (subclone pAWJL175) AWJL175 gene Length = 2374 Score = 56.0 bits (28), Expect = 8e-05 Identities = 52/60 (86%) Strand = Plus / Minus Query: 166 ctacatatgaagcaaaatgaatgaatatacattttaaagtatgtctatatacatccgtat 225 ||||||| | |||||||||| ||||| |||| | |||| ||||||||||||||| ||||| Sbjct: 2354 ctacatacggagcaaaatgagtgaatctacactctaaaatatgtctatatacattcgtat 2295 Score = 44.1 bits (22), Expect = 0.30 Identities = 37/42 (88%) Strand = Plus / Plus Query: 116 tactccctcggttcctaaatataagtcttttaaaagatttca 157 ||||||||| |||||||||||| ||||||| | |||||||| Sbjct: 2240 tactccctccgttcctaaatatttgtctttttagagatttca 2281
>emb|CR626934.1| Triticum aestivum Length = 94398 Score = 54.0 bits (27), Expect = 3e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 116 tactccctcggttcctaaatataagtctttt 146 ||||||||| ||||||||||||||||||||| Sbjct: 49912 tactccctctgttcctaaatataagtctttt 49942
>gb|AF287726.1|AF287726 Hordeum vulgare clone pFL699 1,4-beta-D xylan xylanohydrolase gene, complete cds Length = 5474 Score = 54.0 bits (27), Expect = 3e-04 Identities = 94/115 (81%), Gaps = 1/115 (0%) Strand = Plus / Minus Query: 116 tactccctcggttcctaaatataagtcttttaaaagatttcactaggggtctacatatga 175 ||||||||| |||||||||||| || | ||| |||||||||| || ||||||| | Sbjct: 530 tactccctccgttcctaaatatcaggccttttaaagatttcaatatata-ctacatacgg 472 Query: 176 agcaaaatgaatgaatatacattttaaagtatgtctatatacatccgtatatagt 230 | |||||||||||||| |||| |||| ||||||||||||||| || ||||||| Sbjct: 471 aacaaaatgaatgaatgtacacgctaaaatatgtctatatacattcgcatatagt 417
>emb|AJ507214.1|HVU507214 Hordeum vulgare bbr gene for barley B recombinant Length = 4946 Score = 54.0 bits (27), Expect = 3e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 178 caaaatgaatgaatatacattttaaagtatgtctatatacatccgtatata 228 |||||||| ||||| || |||||||| |||| |||||||||||| |||||| Sbjct: 1319 caaaatgagtgaatgtatattttaaaatatgactatatacatccatatata 1269 Score = 46.1 bits (23), Expect = 0.076 Identities = 47/55 (85%) Strand = Plus / Minus Query: 176 agcaaaatgaatgaatatacattttaaagtatgtctatatacatccgtatatagt 230 |||||||||| ||||| || | | |||| | ||||||||||||||||||| |||| Sbjct: 1134 agcaaaatgagtgaatctatactctaaaatgtgtctatatacatccgtatgtagt 1080 Score = 42.1 bits (21), Expect = 1.2 Identities = 39/45 (86%) Strand = Plus / Plus Query: 116 tactccctcggttcctaaatataagtcttttaaaagatttcacta 160 |||||| || ||||||||||||||| | ||| ||||||| ||||| Sbjct: 1217 tactccatccgttcctaaatataagaccttttaaagattacacta 1261 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 116 tactccctcggttcctaaatataag 140 ||||||||| ||||||||||||||| Sbjct: 1032 tactccctccgttcctaaatataag 1056
>gb|DQ352178.1| Hordeum vulgare subsp. vulgare rust resistance gene ABC1041 (ABC1041) gene, complete cds Length = 8735 Score = 54.0 bits (27), Expect = 3e-04 Identities = 93/115 (80%) Strand = Plus / Plus Query: 116 tactccctcggttcctaaatataagtcttttaaaagatttcactaggggtctacatatga 175 ||||||||| ||||| ||||||||| | ||| | |||||||||| | ||||||| | Sbjct: 5640 tactccctccgttccaaaatataagaccttttaggtatttcactagaagactacatacgg 5699 Query: 176 agcaaaatgaatgaatatacattttaaagtatgtctatatacatccgtatatagt 230 |||||||||| |||| || | | |||| ||||||||| ||||||||||| |||| Sbjct: 5700 agcaaaatgagcgaatctatactctaaaatatgtctatgtacatccgtatgtagt 5754 Score = 48.1 bits (24), Expect = 0.019 Identities = 27/28 (96%) Strand = Plus / Minus Query: 113 aactactccctcggttcctaaatataag 140 |||||||||||| ||||||||||||||| Sbjct: 5805 aactactccctccgttcctaaatataag 5778
>gb|AF474982.1| Hordeum vulgare clone BAC 011009, complete sequence Length = 77136 Score = 54.0 bits (27), Expect = 3e-04 Identities = 102/127 (80%) Strand = Plus / Minus Query: 131 taaatataagtcttttaaaagatttcactaggggtctacatatgaagcaaaatgaatgaa 190 ||||||||| |||||| | | ||||||||||||| || ||| ||||| |||| |||| Sbjct: 60034 taaatataaatctttttagatgtttcactaggggtttatatacagagcaacatgagtgaa 59975 Query: 191 tatacattttaaagtatgtctatatacatccgtatatagtccattagtgaaacctttaaa 250 | || | | |||| ||||||||||||||| | ||| |||| |||||||||||| |||| Sbjct: 59974 tttatactctaaattatgtctatatacattcatatgtagtgttttagtgaaacctgtaaa 59915 Query: 251 aagactt 257 || |||| Sbjct: 59914 aaaactt 59908 Score = 44.1 bits (22), Expect = 0.30 Identities = 28/30 (93%) Strand = Plus / Plus Query: 117 actccctcggttcctaaatataagtctttt 146 |||||||| ||||||||||||||| ||||| Sbjct: 56779 actccctccgttcctaaatataagcctttt 56808
>gb|AF479764.1| Triticum aestivum glutathione-S-transferase 28e45 mRNA, complete cds Length = 1018 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Minus Query: 180 aaatgaatgaatatacattttaaagtatgtctatatacatccgtat 225 ||||||||| || |||| | |||| ||||||||||||||||||||| Sbjct: 941 aaatgaatgtatctacactctaaaatatgtctatatacatccgtat 896
>emb|AJ400714.1|TAE400714 Triticum aestivum vp1D gene for VIVIPAROUS1, exons 1-6 Length = 4230 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Minus Query: 116 tactccctcggttcctaaatataagtcttt 145 ||||||||| |||||||||||||||||||| Sbjct: 2946 tactccctccgttcctaaatataagtcttt 2917 Score = 50.1 bits (25), Expect = 0.005 Identities = 40/45 (88%) Strand = Plus / Plus Query: 116 tactccctcggttcctaaatataagtcttttaaaagatttcacta 160 ||||||||| ||||||||||||||||||| | ||||||||||| Sbjct: 2785 tactccctccattcctaaatataagtctttgtagagatttcacta 2829
>emb|X68288.1|TAECPRO T.aestivum gene for EC protein Length = 3065 Score = 50.1 bits (25), Expect = 0.005 Identities = 49/57 (85%) Strand = Plus / Minus Query: 166 ctacatatgaagcaaaatgaatgaatatacattttaaagtatgtctatatacatccg 222 ||||||| | |||||||||||||||| || | |||||| |||||||| || |||||| Sbjct: 1811 ctacatacggagcaaaatgaatgaatctatactttaaaatatgtctacatgcatccg 1755
>gb|AF343493.1| Secale cereale clone pla 3-phosphoglycerate kinase (Pgk-1) gene, partial cds; nuclear gene for plastid product Length = 1535 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Minus Query: 118 ctccctcggttcctaaatataagtctttt 146 ||||||| ||||||||||||||||||||| Sbjct: 1375 ctccctccgttcctaaatataagtctttt 1347 Score = 46.1 bits (23), Expect = 0.076 Identities = 29/31 (93%) Strand = Plus / Plus Query: 115 ctactccctcggttcctaaatataagtcttt 145 |||||||||| ||||| |||||||||||||| Sbjct: 1212 ctactccctctgttcccaaatataagtcttt 1242
>emb|AJ459252.1|TAE459252 Triticum aestivum TAA1b gene for fatty acyl coA reductase Length = 4308 Score = 50.1 bits (25), Expect = 0.005 Identities = 88/108 (81%), Gaps = 2/108 (1%) Strand = Plus / Plus Query: 114 actactccctcggttcctaaatataagtcttttaaaagatttcactaggggtctacatat 173 ||||||||||| |||||||||||| ||||||| ||||||| || | | | ||||||| Sbjct: 970 actactccctccgttcctaaatat--gtctttttaaagattccaacaagtgactacatac 1027 Query: 174 gaagcaaaatgaatgaatatacattttaaagtatgtctatatacatcc 221 | ||||||||||||| || ||| |||| |||||||| |||||||| Sbjct: 1028 agaataaaatgaatgaatctatattctaaaatatgtctacatacatcc 1075 Score = 48.1 bits (24), Expect = 0.019 Identities = 30/32 (93%) Strand = Plus / Minus Query: 115 ctactccctcggttcctaaatataagtctttt 146 |||||||||| |||||||||||||||| |||| Sbjct: 1135 ctactccctccgttcctaaatataagtttttt 1104
>gb|AY642926.1| Hordeum vulgare BAC CC24_14, complete sequence Length = 184425 Score = 50.1 bits (25), Expect = 0.005 Identities = 56/65 (86%), Gaps = 1/65 (1%) Strand = Plus / Plus Query: 166 ctacatatgaagcaaaatgaatgaatatacattttaaagtatgtctatatacatccgtat 225 ||||||| ||||||||||| ||||| || |||| |||| |||||||||||||| ||||| Sbjct: 178029 ctacatacaaagcaaaatgagtgaatctatatttaaaag-atgtctatatacattcgtat 178087 Query: 226 atagt 230 |||| Sbjct: 178088 gtagt 178092 Score = 50.1 bits (25), Expect = 0.005 Identities = 46/53 (86%) Strand = Plus / Minus Query: 179 aaaatgaatgaatatacattttaaagtatgtctatatacatccgtatatagtc 231 ||||||||||||| || || |||| ||||||||||| ||||||||| ||||| Sbjct: 167407 aaaatgaatgaatctatcttctaaaatatgtctatattcatccgtatgtagtc 167355 Score = 48.1 bits (24), Expect = 0.019 Identities = 45/52 (86%) Strand = Plus / Plus Query: 179 aaaatgaatgaatatacattttaaagtatgtctatatacatccgtatatagt 230 ||||| ||||||| || |||||||| ||||||||||||| || |||| |||| Sbjct: 177885 aaaataaatgaatctatattttaaaatatgtctatatacgtcagtatctagt 177936 Score = 46.1 bits (23), Expect = 0.076 Identities = 26/27 (96%) Strand = Plus / Minus Query: 114 actactccctcggttcctaaatataag 140 ||||||||||| ||||||||||||||| Sbjct: 178142 actactccctccgttcctaaatataag 178116
>emb|X58565.1|HVPRP1C H.vulgare mRNA for a pathogenesis-related protein (Hv-1c) Length = 748 Score = 48.1 bits (24), Expect = 0.019 Identities = 78/96 (81%), Gaps = 5/96 (5%) Strand = Plus / Plus Query: 116 tactccctcggttcctaaa-----tataagtcttttaaaagatttcactaggggtctaca 170 ||||||||| ||||||||| ||||| |||||||| |||||| ||||| || ||||| Sbjct: 628 tactccctccgttcctaaatacagtataaatcttttaagagattttactagtggactaca 687 Query: 171 tatgaagcaaaatgaatgaatatacattttaaagta 206 || ||| |||||| | ||||| || | ||||||||| Sbjct: 688 tacgaaacaaaataagtgaatgtatactttaaagta 723
>gb|DQ247830.1| Aegilops longissima voucher H6679 disrupted meiotic cDNA 1 (DMC1) gene, partial cds; and Stowaway miniature inverted-repeat transposable element, complete sequence Length = 1170 Score = 48.1 bits (24), Expect = 0.019 Identities = 51/60 (85%) Strand = Plus / Plus Query: 166 ctacatatgaagcaaaatgaatgaatatacattttaaagtatgtctatatacatccgtat 225 ||||||| | |||||||||| ||||| |||| | |||| ||||||| |||||||||||| Sbjct: 968 ctacatacggagcaaaatgagtgaatctacactctaaaacatgtctacatacatccgtat 1027
>gb|AF108008.1|AF108008 Hordeum vulgare HV1LRR1 (HV1LRR1) gene, complete cds Length = 5163 Score = 48.1 bits (24), Expect = 0.019 Identities = 92/116 (79%), Gaps = 1/116 (0%) Strand = Plus / Plus Query: 115 ctactccctcggttcctaaatataagtcttttaaaagatttcactaggggtctacatatg 174 |||||||||| |||||||||||| | ||| | | |||| |||| ||| ||||||| | Sbjct: 3842 ctactccctccgttcctaaatatvvgascttttagacattttactatggg-ctacatacg 3900 Query: 175 aagcaaaatgaatgaatatacattttaaagtatgtctatatacatccgtatatagt 230 | |||||||| ||||| || | | ||| | ||||||||||||||||||| |||| Sbjct: 3901 gaacaaaatgagtgaatctatactctaavatgtgtctatatacatccgtatgtagt 3956
>gb|AY663392.1| Triticum aestivum cultivar Renan clone BAC 930H14, complete sequence Length = 153766 Score = 46.1 bits (23), Expect = 0.076 Identities = 29/31 (93%) Strand = Plus / Minus Query: 116 tactccctcggttcctaaatataagtctttt 146 ||||||||| || |||||||||||||||||| Sbjct: 8717 tactccctctgtacctaaatataagtctttt 8687
>gb|AY146588.1| Triticum monococcum BAC clone 453N11, complete sequence Length = 285444 Score = 46.1 bits (23), Expect = 0.076 Identities = 41/47 (87%) Strand = Plus / Plus Query: 176 agcaaaatgaatgaatatacattttaaagtatgtctatatacatccg 222 |||||||||| | ||| |||| | |||| |||||||||||||||||| Sbjct: 198509 agcaaaatgagtaaatctacactgtaaaatatgtctatatacatccg 198555 Score = 46.1 bits (23), Expect = 0.076 Identities = 41/47 (87%) Strand = Plus / Plus Query: 176 agcaaaatgaatgaatatacattttaaagtatgtctatatacatccg 222 |||||||||| | ||| |||| | |||| |||||||||||||||||| Sbjct: 44755 agcaaaatgagtaaatctacactgtaaaatatgtctatatacatccg 44801
>gb|AY133250.1|AY133250S1 Hordeum vulgare subsp. vulgare starch synthase II gene, exons 1 through 8 Length = 4976 Score = 46.1 bits (23), Expect = 0.076 Identities = 29/31 (93%) Strand = Plus / Minus Query: 200 taaagtatgtctatatacatccgtatatagt 230 |||||||||| ||||||||||||||| |||| Sbjct: 2286 taaagtatgtttatatacatccgtatgtagt 2256 Score = 46.1 bits (23), Expect = 0.076 Identities = 29/31 (93%) Strand = Plus / Plus Query: 127 ttcctaaatataagtcttttaaaagatttca 157 |||||||||||||||||||| | |||||||| Sbjct: 2219 ttcctaaatataagtctttttatagatttca 2249
>emb|X99705.1|TAPALGEN1 T.aestivum PAL gene Length = 3444 Score = 46.1 bits (23), Expect = 0.076 Identities = 32/35 (91%) Strand = Plus / Plus Query: 114 actactccctcggttcctaaatataagtcttttaa 148 ||||||||||| ||| ||||||||||||| ||||| Sbjct: 50 actactccctctgtttctaaatataagtcctttaa 84
>gb|AY951944.1| Triticum monococcum TmBAC 21C6 FR-Am2 locus, genomic sequence Length = 190469 Score = 46.1 bits (23), Expect = 0.076 Identities = 38/43 (88%) Strand = Plus / Plus Query: 178 caaaatgaatgaatatacattttaaagtatgtctatatacatc 220 |||||||| ||||| |||| | |||| |||||||||||||||| Sbjct: 172980 caaaatgagtgaatctacactctaaattatgtctatatacatc 173022
>gb|AY663391.1| Triticum turgidum cultivar Langdon clone BAC 1156G16, complete sequence Length = 187012 Score = 46.1 bits (23), Expect = 0.076 Identities = 29/31 (93%) Strand = Plus / Minus Query: 116 tactccctcggttcctaaatataagtctttt 146 ||||||||| || |||||||||||||||||| Sbjct: 17325 tactccctctgtacctaaatataagtctttt 17295 Score = 40.1 bits (20), Expect = 4.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 185 aatgaatatacattttaaagtatgtctatatacatc 220 ||||||| |||| |||| | |||||||||||||||| Sbjct: 17231 aatgaatgtacactttagaatatgtctatatacatc 17266
>gb|AY133251.1|AY133250S2 Hordeum vulgare subsp. vulgare starch synthase II gene, exon 9 and complete cds Length = 3856 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Plus Query: 124 cggttcctaaatataagtcttt 145 |||||||||||||||||||||| Sbjct: 3802 cggttcctaaatataagtcttt 3823
>gb|AF460219.1| Hordeum vulgare subsp. vulgare nuclear transcription factor SLN1 gene, complete cds Length = 4098 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Plus Query: 115 ctactccctcggttcctaaatataag 140 |||||||||| ||||||||||||||| Sbjct: 702 ctactccctccgttcctaaatataag 727
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.30 Identities = 28/30 (93%) Strand = Plus / Plus Query: 110 gtaaactactccctcggttcctaaatataa 139 ||||||||||||||| ||||| |||||||| Sbjct: 2715975 gtaaactactccctccgttccaaaatataa 2716004 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 116 tactccctcggttcctaaatataa 139 ||||||||||||||| |||||||| Sbjct: 9735297 tactccctcggttccaaaatataa 9735274
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Plus Query: 115 ctactccctcggttcctaaatataag 140 |||||||||| ||||||||||||||| Sbjct: 10956532 ctactccctccgttcctaaatataag 10956557 Score = 44.1 bits (22), Expect = 0.30 Identities = 31/34 (91%) Strand = Plus / Plus Query: 113 aactactccctcggttcctaaatataagtctttt 146 |||||||||||| ||||| |||||||||| |||| Sbjct: 2215776 aactactccctccgttccaaaatataagtatttt 2215809
>emb|AL954308.12| Zebrafish DNA sequence from clone DKEY-13J15 in linkage group 4, complete sequence Length = 223608 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Plus Query: 174 gaagcaaaatgaatgaatatac 195 |||||||||||||||||||||| Sbjct: 129307 gaagcaaaatgaatgaatatac 129328
>dbj|AP004806.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0710H01 Length = 187107 Score = 44.1 bits (22), Expect = 0.30 Identities = 28/30 (93%) Strand = Plus / Plus Query: 110 gtaaactactccctcggttcctaaatataa 139 ||||||||||||||| ||||| |||||||| Sbjct: 171316 gtaaactactccctccgttccaaaatataa 171345
>dbj|AP006554.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0529C07 Length = 174011 Score = 44.1 bits (22), Expect = 0.30 Identities = 28/30 (93%) Strand = Plus / Plus Query: 110 gtaaactactccctcggttcctaaatataa 139 ||||||||||||||| ||||| |||||||| Sbjct: 127722 gtaaactactccctccgttccaaaatataa 127751
>dbj|AP004168.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1756_H07 Length = 217205 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Plus Query: 115 ctactccctcggttcctaaatataag 140 |||||||||| ||||||||||||||| Sbjct: 162731 ctactccctccgttcctaaatataag 162756
>dbj|AP005721.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1123_E07 Length = 113187 Score = 44.1 bits (22), Expect = 0.30 Identities = 31/34 (91%) Strand = Plus / Plus Query: 113 aactactccctcggttcctaaatataagtctttt 146 |||||||||||| ||||| |||||||||| |||| Sbjct: 2725 aactactccctccgttccaaaatataagtatttt 2758
>dbj|AP005294.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1679_B08 Length = 142529 Score = 44.1 bits (22), Expect = 0.30 Identities = 31/34 (91%) Strand = Plus / Plus Query: 113 aactactccctcggttcctaaatataagtctttt 146 |||||||||||| ||||| |||||||||| |||| Sbjct: 130469 aactactccctccgttccaaaatataagtatttt 130502
>gb|AF085168.1|AF085168 Triticum aestivum receptor-like protein kinase pesudogene sequence Length = 3822 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Plus Query: 208 gtctatatacatccgtatatagtcca 233 |||||||||||||||||| ||||||| Sbjct: 3571 gtctatatacatccgtatctagtcca 3596
>gb|AY887089.1| Hordeum vulgare subsp. vulgare clone BAC 423G22 phytochelatin synthetase-like protein (PCS-a) pseudogene, complete sequence Length = 5106 Score = 44.1 bits (22), Expect = 0.30 Identities = 46/54 (85%) Strand = Plus / Minus Query: 166 ctacatatgaagcaaaatgaatgaatatacattttaaagtatgtctatatacat 219 ||||||| |||||||||||| ||||| |||| | |||| || ||||||||||| Sbjct: 2293 ctacataagaagcaaaatgagtgaatctacactctaaaatacatctatatacat 2240
>dbj|AP006082.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT31E04, TM0126, complete sequence Length = 104729 Score = 44.1 bits (22), Expect = 0.30 Identities = 28/30 (93%) Strand = Plus / Plus Query: 111 taaactactccctcggttcctaaatataag 140 |||||||||||||| |||||||| |||||| Sbjct: 43033 taaactactccctccgttcctaattataag 43062
>dbj|AP004960.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT19B18, TM0139, complete sequence Length = 106089 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Minus Query: 115 ctactccctcggttcctaaatataag 140 |||||||||| ||||||||||||||| Sbjct: 12767 ctactccctccgttcctaaatataag 12742
>dbj|AP004543.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT08G20, TM0102b, complete sequence Length = 38490 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Plus Query: 115 ctactccctcggttcctaaatataag 140 |||||||||| ||||||||||||||| Sbjct: 37258 ctactccctccgttcctaaatataag 37283
>gb|AC112209.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0030I09 map C83B, complete sequence Length = 123477 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 119 tccctcggttcctaaatataa 139 ||||||||||||||||||||| Sbjct: 34221 tccctcggttcctaaatataa 34241
>gb|AC129718.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0088I06, complete sequence Length = 187651 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 116 tactccctcggttcctaaatataag 140 ||||||||| ||||||||||||||| Sbjct: 26803 tactccctccgttcctaaatataag 26827
>gb|AC098573.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1651_G11, complete sequence Length = 112796 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 112 aaactactccctcggttcctaaatataag 140 ||||||||||||| || |||||||||||| Sbjct: 49197 aaactactccctccgtccctaaatataag 49169
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 116 tactccctcggttcctaaatataag 140 ||||||||| ||||||||||||||| Sbjct: 3478482 tactccctctgttcctaaatataag 3478458 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 114 actactccctcggttcctaaatat 137 |||||||| ||||||||||||||| Sbjct: 17105561 actactccatcggttcctaaatat 17105538
>emb|CT009558.5| M.truncatula DNA sequence from clone MTH2-72I11 on chromosome 3, complete sequence Length = 145085 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 112 aaactactccctcggttcctaaatataag 140 |||||||||| || ||||||||||||||| Sbjct: 112273 aaactactccatccgttcctaaatataag 112245
>emb|CR962133.1| Medicago truncatula chromosome 5 clone mth2-17h8, COMPLETE SEQUENCE Length = 114811 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 116 tactccctcggttcctaaatataag 140 ||||||||| ||||||||||||||| Sbjct: 99793 tactccctccgttcctaaatataag 99817
>gb|AY459341.1| Oryza sativa (japonica cultivar-group) clone CL031105.6 R2R3-MYB gene region Length = 58956 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 116 tactccctcggttcctaaatataag 140 ||||||||| ||||||||||||||| Sbjct: 54103 tactccctccgttcctaaatataag 54079
>gb|AC136449.21| Medicago truncatula clone mth2-11k13, complete sequence Length = 112369 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 115 ctactccctcggttcctaaatataa 139 |||||||||| |||||||||||||| Sbjct: 16870 ctactccctccgttcctaaatataa 16846
>gb|AC131098.3| Homo sapiens BAC clone RP11-1226D22 from 4, complete sequence Length = 71827 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 186 atgaatatacattttaaagta 206 ||||||||||||||||||||| Sbjct: 31512 atgaatatacattttaaagta 31532
>emb|AL662947.3|OSJN00148 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0073L04, complete sequence Length = 143301 Score = 42.1 bits (21), Expect = 1.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 114 actactccctcggttcctaaatataagtctttt 146 ||||||||||| ||| |||||||||||| |||| Sbjct: 41445 actactccctccgttactaaatataagtatttt 41477
>emb|AJ507395.1|HVU507395 Hordeum vulgare subsp. vulgare rpoT gene for DNA-directed RNA polymerase, chloroplast precursor, exons 1-19 Length = 10573 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 116 tactccctcggttcctaaatataag 140 ||||||||| ||||||||||||||| Sbjct: 10387 tactccctccgttcctaaatataag 10411
>emb|CR381570.12| Zebrafish DNA sequence from clone CH211-74M13 in linkage group 10, complete sequence Length = 151591 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 179 aaaatgaatgaatatacattt 199 ||||||||||||||||||||| Sbjct: 59254 aaaatgaatgaatatacattt 59234
>emb|BX511171.13| Zebrafish DNA sequence from clone DKEY-264K15 in linkage group 4 Contains the ascl1a gene for achaete-scute complex-like 1a (Drosophila), the gene for a novel protein similar to vertebrate RecQ protein-like DNA helicase Q1-like (RECQL), the gene for a novel protein similar to tyrosine hydroxylase (th), the pah gene for phenylalanine hydroxylase, the 5' end of the gene for a novel protein similar to vertebrate uncharacterized hematopoietic stem/progenitor cells protein MDS028 (MDS028) and a CpG island, complete sequence Length = 166242 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 193 tacattttaaagtatgtctat 213 ||||||||||||||||||||| Sbjct: 99814 tacattttaaagtatgtctat 99834
>gb|AC092389.4| Oryza sativa chromosome 10 BAC OSJNBa0053C23 genomic sequence, complete sequence Length = 194361 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 116 tactccctcggttcctaaatataag 140 ||||||||| ||||||||||||||| Sbjct: 158854 tactccctctgttcctaaatataag 158878
>gb|AC153129.20| Medicago truncatula clone mth2-103o2, complete sequence Length = 111951 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 260 aggaacggagggagtagtaag 280 ||||||||||||||||||||| Sbjct: 91545 aggaacggagggagtagtaag 91525
>gb|AC150843.16| Medicago truncatula clone mth2-103p8, complete sequence Length = 125707 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 112 aaactactccctcggttcctaaatataag 140 ||||||||||||| ||| ||||||||||| Sbjct: 123100 aaactactccctccgtttctaaatataag 123128
>gb|AC166898.17| Medicago truncatula clone mth2-70l3, complete sequence Length = 100341 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 112 aaactactccctcggttcctaaatataag 140 ||||||||||||| ||| ||||||||||| Sbjct: 87238 aaactactccctccgtttctaaatataag 87210
>emb|BX323839.13| Zebrafish DNA sequence from clone CH211-217K17 in linkage group 1, complete sequence Length = 155358 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 174 gaagcaaaatgaatgaatata 194 ||||||||||||||||||||| Sbjct: 40628 gaagcaaaatgaatgaatata 40648
>gb|AC104428.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1123F12, complete sequence Length = 103330 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 116 tactccctcggttcctaaatataag 140 ||||||||| ||||||||||||||| Sbjct: 31893 tactccctctgttcctaaatataag 31917
>gb|AC147963.2| Medicago truncatula chromosome 1 BAC clone mth2-42e19, complete sequence Length = 106951 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 112 aaactactccctcggttcctaaatataag 140 ||||||||||||| ||| ||||||||||| Sbjct: 80250 aaactactccctccgtttctaaatataag 80222
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 114 actactccctcggttcctaaatataagtctttt 146 ||||||||||| ||| |||||||||||| |||| Sbjct: 20310812 actactccctccgttactaaatataagtatttt 20310844
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 119 tccctcggttcctaaatataa 139 ||||||||||||||||||||| Sbjct: 2588183 tccctcggttcctaaatataa 2588163 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 113 aactactccctcggttcctaaatataag 140 |||||||||||| || |||||||||||| Sbjct: 27544653 aactactccctccgtccctaaatataag 27544680 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 116 tactccctcggttcctaaatataa 139 ||||||||| |||||||||||||| Sbjct: 6469178 tactccctctgttcctaaatataa 6469201
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 116 tactccctcggttcctaaatataag 140 ||||||||| ||||||||||||||| Sbjct: 20281119 tactccctctgttcctaaatataag 20281143
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 116 tactccctcggttcctaaatataag 140 ||||||||| ||||||||||||||| Sbjct: 20360119 tactccctccgttcctaaatataag 20360095 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 116 tactccctcggttcctaaatataag 140 ||||||||| ||||||||||||||| Sbjct: 20360048 tactccctctgttcctaaatataag 20360072 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 113 aactactccctcggttcctaaatataag 140 |||||||||||| ||||| ||||||||| Sbjct: 27424325 aactactccctctgttccaaaatataag 27424298 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 113 aactactccctcggttcctaaatataag 140 |||||||||||| ||||| ||||||||| Sbjct: 24758481 aactactccctccgttccaaaatataag 24758508 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 113 aactactccctcggttcctaaatataag 140 |||||||||||| |||||||||||||| Sbjct: 11484295 aactactccctccattcctaaatataag 11484268
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 112 aaactactccctcggttcctaaatataag 140 ||||||||||||| || |||||||||||| Sbjct: 28730484 aaactactccctccgtccctaaatataag 28730456 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 116 tactccctcggttcctaaatataag 140 ||||||||| ||||||||||||||| Sbjct: 23958314 tactccctccgttcctaaatataag 23958338 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 113 aactactccctcggttcctaaatataag 140 |||||||||||| ||||| ||||||||| Sbjct: 14654291 aactactccctccgttccaaaatataag 14654318
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 116 tactccctcggttcctaaatataag 140 ||||||||| ||||||||||||||| Sbjct: 3478593 tactccctctgttcctaaatataag 3478569 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 114 actactccctcggttcctaaatat 137 |||||||| ||||||||||||||| Sbjct: 17099130 actactccatcggttcctaaatat 17099107
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 112 aaactactccctcggttcctaaatataag 140 |||||||| |||| ||||||||||||||| Sbjct: 13968981 aaactacttcctccgttcctaaatataag 13969009 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 116 tactccctcggttcctaaatataag 140 |||||||||||| |||||||||||| Sbjct: 7610854 tactccctcggtccctaaatataag 7610878 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 117 actccctcggttcctaaatataag 140 |||||||| ||||||||||||||| Sbjct: 42091242 actccctccgttcctaaatataag 42091219 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 116 tactccctcggttcctaaatataa 139 ||||||||| |||||||||||||| Sbjct: 21121686 tactccctccgttcctaaatataa 21121709 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 117 actccctcggttcctaaatataag 140 |||||||| ||||||||||||||| Sbjct: 11591989 actccctccgttcctaaatataag 11591966
>dbj|AP002855.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0086P08 Length = 145312 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 116 tactccctcggttcctaaatataag 140 |||||||||||| |||||||||||| Sbjct: 21430 tactccctcggtccctaaatataag 21454
>dbj|AP001539.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0708G02 Length = 168976 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 116 tactccctcggttcctaaatataag 140 |||||||||||| |||||||||||| Sbjct: 159646 tactccctcggtccctaaatataag 159670
>dbj|AP003764.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1051E10 Length = 207782 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 112 aaactactccctcggttcctaaatataag 140 |||||||| |||| ||||||||||||||| Sbjct: 129283 aaactacttcctccgttcctaaatataag 129311
>dbj|AP003258.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0463A02 Length = 151041 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 112 aaactactccctcggttcctaaatataag 140 |||||||| |||| ||||||||||||||| Sbjct: 44726 aaactacttcctccgttcctaaatataag 44754
>dbj|AP005537.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0056L09 Length = 152910 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 116 tactccctcggttcctaaatataag 140 ||||||||| ||||||||||||||| Sbjct: 107867 tactccctccgttcctaaatataag 107843 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 116 tactccctcggttcctaaatataag 140 ||||||||| ||||||||||||||| Sbjct: 107796 tactccctctgttcctaaatataag 107820
>gb|AF181459.1|AF181459 Hordeum vulgare dehydrin (Dhn9) gene, complete cds Length = 1791 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 115 ctactccctcggttcctaaatataagtct 143 |||||||||| ||| |||||||||||||| Sbjct: 1514 ctactccctccgttactaaatataagtct 1542
>emb|BX927109.13| Zebrafish DNA sequence from clone CH211-80D23 in linkage group 18, complete sequence Length = 169784 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 172 atgaagcaaaatgaatgaata 192 ||||||||||||||||||||| Sbjct: 77996 atgaagcaaaatgaatgaata 78016
>emb|BX936417.8| Zebrafish DNA sequence from clone DKEY-231D7 in linkage group 18, complete sequence Length = 151853 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 172 atgaagcaaaatgaatgaata 192 ||||||||||||||||||||| Sbjct: 91873 atgaagcaaaatgaatgaata 91853
>emb|BX510924.11| Zebrafish DNA sequence from clone CH211-260P3 in linkage group 4, complete sequence Length = 143251 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 193 tacattttaaagtatgtctat 213 ||||||||||||||||||||| Sbjct: 142217 tacattttaaagtatgtctat 142197
>emb|BX927095.15| Zebrafish DNA sequence from clone CH211-202E13 in linkage group 17, complete sequence Length = 211277 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 173 tgaagcaaaatgaatgaatat 193 ||||||||||||||||||||| Sbjct: 33933 tgaagcaaaatgaatgaatat 33953
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 116 tactccctcggttcctaaatataag 140 ||||||||| ||||||||||||||| Sbjct: 20292395 tactccctctgttcctaaatataag 20292419
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 119 tccctcggttcctaaatataa 139 ||||||||||||||||||||| Sbjct: 2597214 tccctcggttcctaaatataa 2597194 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 113 aactactccctcggttcctaaatataag 140 |||||||||||| || |||||||||||| Sbjct: 27568641 aactactccctccgtccctaaatataag 27568668 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 116 tactccctcggttcctaaatataa 139 ||||||||| |||||||||||||| Sbjct: 6535645 tactccctctgttcctaaatataa 6535668
>emb|AL845303.11| Zebrafish DNA sequence from clone CH211-146K13 in linkage group 1, complete sequence Length = 54016 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 179 aaaatgaatgaatatacattt 199 ||||||||||||||||||||| Sbjct: 20469 aaaatgaatgaatatacattt 20449
>dbj|AP006693.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT35C17, TM0399, complete sequence Length = 94919 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 116 tactccctcggttcctaaatataag 140 ||||||||| ||||||||||||||| Sbjct: 78659 tactccctccgttcctaaatataag 78635
>dbj|AP006687.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT41F23, TM0382, complete sequence Length = 99748 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 116 tactccctcggttcctaaatataag 140 ||||||||| ||||||||||||||| Sbjct: 4785 tactccctccgttcctaaatataag 4761 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 116 tactccctcggttcctaaatataag 140 ||||||||| ||||||||||||||| Sbjct: 4477 tactccctccgttcctaaatataag 4501
>dbj|AP006410.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT29C05, TM0301a, complete sequence Length = 28124 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 116 tactccctcggttcctaaatataag 140 ||||||||| ||||||||||||||| Sbjct: 27422 tactccctccgttcctaaatataag 27398
>dbj|AP006381.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT09G09, TM0234, complete sequence Length = 105887 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 116 tactccctcggttcctaaatataag 140 ||||||||| ||||||||||||||| Sbjct: 26323 tactccctccgttcctaaatataag 26347
>dbj|AP006356.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT06I08, TM0082b, complete sequence Length = 93398 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 116 tactccctcggttcctaaatataag 140 ||||||||| ||||||||||||||| Sbjct: 25824 tactccctccgttcctaaatataag 25848
>dbj|AP006347.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT02G18, TM0334a, complete sequence Length = 77969 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 116 tactccctcggttcctaaatataag 140 ||||||||| ||||||||||||||| Sbjct: 40819 tactccctccgttcctaaatataag 40795 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 116 tactccctcggttcctaaatataag 140 ||||||||| ||||||||||||||| Sbjct: 40510 tactccctccgttcctaaatataag 40534
>dbj|AP006143.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT16L07, TM0254, complete sequence Length = 118592 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 116 tactccctcggttcctaaatataag 140 ||||||||| ||||||||||||||| Sbjct: 68703 tactccctccgttcctaaatataag 68727 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 116 tactccctcggttcctaaatataag 140 ||||||||| ||||||||||||||| Sbjct: 57033 tactccctccgttcctaaatataag 57057
>dbj|AP006096.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT10G09, TM0173b, complete sequence Length = 66866 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 116 tactccctcggttcctaaatataag 140 ||||||||| ||||||||||||||| Sbjct: 3299 tactccctccgttcctaaatataag 3275
>dbj|AP004940.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT48I11, TM0106, complete sequence Length = 103636 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 116 tactccctcggttcctaaatataag 140 ||||||||| ||||||||||||||| Sbjct: 23896 tactccctccgttcctaaatataag 23872 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 116 tactccctcggttcctaaatataag 140 ||||||||| ||||||||||||||| Sbjct: 23587 tactccctccgttcctaaatataag 23611
>dbj|AP004898.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT01P23, TM0047b, complete sequence Length = 69411 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 116 tactccctcggttcctaaatataag 140 ||||||||| ||||||||||||||| Sbjct: 44068 tactccctccgttcctaaatataag 44092
>dbj|AP004526.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT05E07, TM0055, complete sequence Length = 94516 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 116 tactccctcggttcctaaatataag 140 ||||||||| ||||||||||||||| Sbjct: 69524 tactccctccgttcctaaatataag 69548
>dbj|AP004506.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT03K03, TM0036a, complete sequence Length = 62624 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 116 tactccctcggttcctaaatataag 140 ||||||||| ||||||||||||||| Sbjct: 12163 tactccctccgttcctaaatataag 12139
>dbj|AP004489.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT04I02, TM0021, complete sequence Length = 83700 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 116 tactccctcggttcctaaatataag 140 ||||||||| ||||||||||||||| Sbjct: 44851 tactccctccgttcctaaatataag 44827 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 116 tactccctcggttcctaaatataa 139 ||||||||| |||||||||||||| Sbjct: 44547 tactccctccgttcctaaatataa 44570
>dbj|AP004466.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT09C23, TM0001, complete sequence Length = 103397 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 116 tactccctcggttcctaaatataag 140 ||||||||| ||||||||||||||| Sbjct: 30579 tactccctccgttcctaaatataag 30603
>gb|AC112962.15| Mus musculus chromosome 19, clone RP24-74N6, complete sequence Length = 182999 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 gaatgaatatacattttaaa 203 |||||||||||||||||||| Sbjct: 80141 gaatgaatatacattttaaa 80160
>gb|AC134344.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0059K16, complete sequence Length = 139615 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 113 aactactccctcggttcctaaatataag 140 |||||||||||| ||||| ||||||||| Sbjct: 70585 aactactccctccgttccaaaatataag 70612
>gb|AC148822.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0036K13 map near R3342S, complete sequence Length = 135684 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 113 aactactccctcggttcctaaatataag 140 |||||||||||| || |||||||||||| Sbjct: 80780 aactactccctccgtccctaaatataag 80807
>gb|AC158141.8| Mus musculus chromosome 5, clone RP23-281M20, complete sequence Length = 220396 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 gtccattagtgaaacctttaaaaa 252 ||||| |||||||||||||||||| Sbjct: 121574 gtccactagtgaaacctttaaaaa 121597
>gb|AC102505.8| Mus musculus chromosome 1, clone RP24-73K7, complete sequence Length = 209838 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 tcttttaaaagatttcacta 160 |||||||||||||||||||| Sbjct: 7969 tcttttaaaagatttcacta 7988
>gb|AC146377.5| Pan troglodytes BAC clone RP43-79B6 from 7, complete sequence Length = 195459 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 atgaatatacattttaaagt 205 |||||||||||||||||||| Sbjct: 102213 atgaatatacattttaaagt 102232
>gb|AY585885.1| Triticum aestivum clone HT5 genomic sequence Length = 482 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 115 ctactccctcggttcctaaatata 138 |||||||||| ||||||||||||| Sbjct: 397 ctactccctctgttcctaaatata 374
>gb|AC002067.2| Homo sapiens BAC clone CTB-126M9 from 7, complete sequence Length = 162912 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 atgaatatacattttaaagt 205 |||||||||||||||||||| Sbjct: 75648 atgaatatacattttaaagt 75667
>gb|AC120538.4| Oryza sativa chromosome 3 BAC OSJNBb0059G13 genomic sequence, complete sequence Length = 157662 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 114 actactccctcggttcctaaatat 137 |||||||| ||||||||||||||| Sbjct: 136307 actactccatcggttcctaaatat 136284
>emb|CR735143.13| Zebrafish DNA sequence from clone CH211-244P16 in linkage group 5, complete sequence Length = 147626 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 aaaatgaatgaatatacatt 198 |||||||||||||||||||| Sbjct: 103767 aaaatgaatgaatatacatt 103748
>emb|BX842700.35| Zebrafish DNA sequence from clone DKEY-2P18 in linkage group 4, complete sequence Length = 198258 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 173 tgaagcaaaatgaatgaatatacatttt 200 ||||| ||||||||||||| |||||||| Sbjct: 143087 tgaagtaaaatgaatgaatgtacatttt 143060
>emb|CR318662.11| Zebrafish DNA sequence from clone CH211-213L7 in linkage group 10, complete sequence Length = 200648 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 tgaagcaaaatgaatgaata 192 |||||||||||||||||||| Sbjct: 49468 tgaagcaaaatgaatgaata 49487
>emb|CR854834.11| Zebrafish DNA sequence from clone DKEYP-92B10 in linkage group 11, complete sequence Length = 140484 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 aaatgaatgaatatacattt 199 |||||||||||||||||||| Sbjct: 102453 aaatgaatgaatatacattt 102434
>gb|AC004140.2| Homo sapiens PAC clone RP5-841B21 from 7, complete sequence Length = 74918 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 190 atatacattttaaagtatgtctat 213 ||||| |||||||||||||||||| Sbjct: 50080 atatatattttaaagtatgtctat 50057
>gb|AC114575.8| Mus musculus chromosome 12, clone RP23-152I9, complete sequence Length = 193164 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 188 gaatatacattttaaagtatgtct 211 ||||||||||||||| |||||||| Sbjct: 164344 gaatatacattttaaggtatgtct 164321
>gb|AC144375.14| Medicago truncatula clone mth2-11p13, complete sequence Length = 123953 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 114 actactccctcggttcctaaatataagt 141 ||||||||||| ||| |||||||||||| Sbjct: 76103 actactccctccgtttctaaatataagt 76130
>gb|AC144516.5| Medicago truncatula clone mth2-28p22, complete sequence Length = 111130 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 aggaacggagggagtagtaa 279 |||||||||||||||||||| Sbjct: 109929 aggaacggagggagtagtaa 109910
>gb|AC147498.14| Medicago truncatula clone mth2-6f18, complete sequence Length = 135726 Score = 40.1 bits (20), Expect = 4.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 110 gtaaactactccctcggttcctaaatataagt 141 ||||||||||||||| ||| | |||||||||| Sbjct: 3923 gtaaactactccctccgtttcaaaatataagt 3954
>emb|CR450782.5| Zebrafish DNA sequence from clone CH211-245B21 in linkage group 3, complete sequence Length = 99702 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 attagtgaaacctttaaaaa 252 |||||||||||||||||||| Sbjct: 26765 attagtgaaacctttaaaaa 26784
>gb|AC128353.6| Rattus norvegicus 13 BAC CH230-148A5 (Children's Hospital Oakland Research Institute) complete sequence Length = 207556 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 catgatgaatccatcgtcca 45 |||||||||||||||||||| Sbjct: 6563 catgatgaatccatcgtcca 6544
>gb|BT009452.1| Triticum aestivum clone wlmk8.pk0022.f7:fis, full insert mRNA sequence Length = 1996 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 114 actactccctcggttcctaaatat 137 ||||||||||| |||||||||||| Sbjct: 781 actactccctccgttcctaaatat 804
>gb|BT009240.1| Triticum aestivum clone wlk1.pk0007.f5:fis, full insert mRNA sequence Length = 1041 Score = 40.1 bits (20), Expect = 4.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 114 actactccctcggttcctaaatataagtcttt 145 ||||||||||| || |||||||||| |||||| Sbjct: 899 actactccctccgtacctaaatatatgtcttt 868
>emb|CR933103.10| Zebrafish DNA sequence from clone CH211-147G15 in linkage group 8, complete sequence Length = 147936 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 173 tgaagcaaaatgaatgaatataca 196 ||||| |||||||||||||||||| Sbjct: 85671 tgaaggaaaatgaatgaatataca 85648
>emb|CR381576.10| Zebrafish DNA sequence from clone DKEY-245F17 in linkage group 17, complete sequence Length = 185749 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 tgaagcaaaatgaatgaata 192 |||||||||||||||||||| Sbjct: 66970 tgaagcaaaatgaatgaata 66989
>emb|BX957239.7| Zebrafish DNA sequence from clone DKEY-173N20 in linkage group 19, complete sequence Length = 182432 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 gtccattagtgaaaccttta 248 |||||||||||||||||||| Sbjct: 86181 gtccattagtgaaaccttta 86200
>dbj|AP004253.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1116_C07 Length = 108208 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 117 actccctcggttcctaaatataag 140 |||||||| ||||||||||||||| Sbjct: 45785 actccctccgttcctaaatataag 45762
>gb|AC021451.8| Homo sapiens chromosome 8, clone RP11-101E19, complete sequence Length = 173127 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 190 atatacattttaaagtatgtctat 213 ||||| |||||||||||||||||| Sbjct: 76025 atatatattttaaagtatgtctat 76048
>emb|BX537346.18| Zebrafish DNA sequence from clone DKEYP-2A6 in linkage group 1, complete sequence Length = 102802 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 132 aaatataagtcttttaaaagatttcact 159 ||||||||| || ||||||||||||||| Sbjct: 11560 aaatataagactgttaaaagatttcact 11587
>gb|AC137667.18| Medicago truncatula clone mth2-30h5, complete sequence Length = 111249 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 aggaacggagggagtagtaa 279 |||||||||||||||||||| Sbjct: 49584 aggaacggagggagtagtaa 49565
>gb|AC135160.22| Medicago truncatula clone mth2-20m5, complete sequence Length = 120202 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 aggaacggagggagtagtaa 279 |||||||||||||||||||| Sbjct: 74457 aggaacggagggagtagtaa 74476
>gb|DQ220740.1| Aegilops sharonensis genomic sequence Length = 3804 Score = 40.1 bits (20), Expect = 4.7 Identities = 38/43 (88%), Gaps = 2/43 (4%) Strand = Plus / Minus Query: 119 tccctcggttcctaaatataagtcttttaaaagatttcactag 161 |||||| |||||||||||| ||||||||| | |||||||||| Sbjct: 2788 tccctccgttcctaaatat--gtcttttaagaaatttcactag 2748
>gb|AF480431.1| Zea mays plasma membrane H+ ATPase-like gene, partial sequence Length = 6539 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 263 aacggagggagtagtaaggt 282 |||||||||||||||||||| Sbjct: 6534 aacggagggagtagtaaggt 6515
>gb|AC104438.2| Homo sapiens chromosome 3 clone RP11-757A9, complete sequence Length = 175329 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 gaatgaatatacattttaaa 203 |||||||||||||||||||| Sbjct: 75122 gaatgaatatacattttaaa 75141
>gb|AC119072.1| Oryza sativa ssp. japonica cv. Nipponbare OSJNBa0073N20 BAC genomic sequence, complete sequence Length = 147289 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 116 tactccctcggttcctaaatataa 139 ||||||||| |||||||||||||| Sbjct: 75052 tactccctctgttcctaaatataa 75029
>gb|AC026395.11| Homo sapiens chromosome 10 clone RP11-45D20, complete sequence Length = 172777 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 attttaaagtatgtctatat 215 |||||||||||||||||||| Sbjct: 163932 attttaaagtatgtctatat 163951
>gb|AC025947.9| Homo sapiens chromosome 10 clone RP11-78A18, complete sequence Length = 159082 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 attttaaagtatgtctatat 215 |||||||||||||||||||| Sbjct: 89126 attttaaagtatgtctatat 89145
>gb|AC158170.2| Mus musculus BAC clone RP23-261K17 from chromosome 16, complete sequence Length = 176422 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 127 ttcctaaatataagtcttttaaaa 150 ||||| |||||||||||||||||| Sbjct: 2004 ttcctcaatataagtcttttaaaa 2027
>gb|AC157916.2| Mus musculus chromosome 19, clone RP24-330P23, complete sequence Length = 190666 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 gaatgaatatacattttaaa 203 |||||||||||||||||||| Sbjct: 12859 gaatgaatatacattttaaa 12840
>emb|BX649321.4| Zebrafish DNA sequence from clone DKEY-242D22 in linkage group 1, complete sequence Length = 89729 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 179 aaaatgaatgaatatacattttaa 202 |||||||||||||| ||||||||| Sbjct: 12054 aaaatgaatgaataaacattttaa 12031
>gb|AY188331.1| Triticum monococcum DV92 chromosome 5AL BAC 231A16, complete sequence Length = 133625 Score = 40.1 bits (20), Expect = 4.7 Identities = 50/60 (83%) Strand = Plus / Plus Query: 166 ctacatatgaagcaaaatgaatgaatatacattttaaagtatgtctatatacatccgtat 225 ||||||| | |||||||||| ||||| || | | || | |||||||| |||||||||||| Sbjct: 24760 ctacatacggagcaaaatgagtgaatctagactctagaatatgtctacatacatccgtat 24819
>emb|BX649598.17| Zebrafish DNA sequence from clone CH211-214P12 in linkage group 18, complete sequence Length = 213741 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 tgaagcaaaatgaatgaata 192 |||||||||||||||||||| Sbjct: 192736 tgaagcaaaatgaatgaata 192717
>gb|AC148315.3| Pan troglodytes BAC clone CH251-530M14 from chromosome 7, complete sequence Length = 175627 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 190 atatacattttaaagtatgtctat 213 ||||| |||||||||||||||||| Sbjct: 62449 atatatattttaaagtatgtctat 62426
>emb|BX004890.11| Zebrafish DNA sequence from clone DKEY-9A6 in linkage group 11, complete sequence Length = 211406 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 173 tgaagcaaaatgaatgaatataca 196 ||||| |||||||||||||||||| Sbjct: 152418 tgaagaaaaatgaatgaatataca 152395
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 4.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 111 taaactactccctcggttcctaaatataagtctttt 146 ||||||||||| || ||||| |||||||||| |||| Sbjct: 21235004 taaactactccatccgttccaaaatataagtatttt 21235039
>gb|AC110614.4| Homo sapiens BAC clone RP11-453D22 from 2, complete sequence Length = 185018 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 atgaagcaaaatgaatgaat 191 |||||||||||||||||||| Sbjct: 46475 atgaagcaaaatgaatgaat 46494
>dbj|AP004368.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1139B11 Length = 136548 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 117 actccctcggttcctaaatataag 140 |||||||| ||||||||||||||| Sbjct: 78047 actccctccgttcctaaatataag 78024
>dbj|AP003443.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1144D11 Length = 157943 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 116 tactccctcggttcctaaatataa 139 ||||||||| |||||||||||||| Sbjct: 89231 tactccctccgttcctaaatataa 89254
>dbj|AP007204.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0008D05 Length = 134776 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 117 actccctcggttcctaaatataag 140 |||||||| ||||||||||||||| Sbjct: 98996 actccctccgttcctaaatataag 98973
>dbj|AP003924.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1064G04 Length = 186704 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 116 tactccctcggttcctaaatataa 139 ||||||||| |||||||||||||| Sbjct: 19195 tactccctccgttcctaaatataa 19218
>emb|BX324157.4| Zebrafish DNA sequence from clone DKEY-15N1 in linkage group 3, complete sequence Length = 272769 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 175 aagcaaaatgaatgaatatacatt 198 ||||||||||||||||| |||||| Sbjct: 146863 aagcaaaatgaatgaatgtacatt 146886
>dbj|AP005383.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1034_C08 Length = 154441 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 113 aactactccctcggttcctaaatataag 140 |||||||||||| |||||||||||||| Sbjct: 38429 aactactccctccattcctaaatataag 38402
>dbj|AP003892.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1345_D02 Length = 159613 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 113 aactactccctcggttcctaaatataag 140 |||||||||||| ||||| ||||||||| Sbjct: 59282 aactactccctccgttccaaaatataag 59309
>dbj|BA000016.3| Clostridium perfringens str. 13 DNA, complete genome Length = 3031430 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 tgaaacctttaaaaagactt 257 |||||||||||||||||||| Sbjct: 1561917 tgaaacctttaaaaagactt 1561898
>dbj|BA000026.2| Mycoplasma penetrans HF-2 DNA, complete genome Length = 1358633 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 ctaaatataagtcttttaaa 149 |||||||||||||||||||| Sbjct: 666996 ctaaatataagtcttttaaa 667015
>dbj|AP005822.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0456E06 Length = 164353 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 116 tactccctcggttcctaaatataa 139 ||||||||||||||| |||||||| Sbjct: 25539 tactccctcggttccaaaatataa 25516
>dbj|AP003934.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0551A11 Length = 132384 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 117 actccctcggttcctaaatataag 140 |||||||| ||||||||||||||| Sbjct: 31113 actccctccgttcctaaatataag 31090
>dbj|AP004704.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0544G09 Length = 137481 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 113 aactactccctcggttcctaaatataag 140 |||||||||||| ||||| ||||||||| Sbjct: 51120 aactactccctctgttccaaaatataag 51093
>dbj|AP005097.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1114E07 Length = 135511 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 113 aactactccctcggttcctaaatataag 140 |||||||||||| |||||||||||||| Sbjct: 98284 aactactccctccattcctaaatataag 98257
>emb|X60292.1|HVLTP1G Hordeum vulgare gene for LTP 1 Length = 2874 Score = 40.1 bits (20), Expect = 4.7 Identities = 38/44 (86%) Strand = Plus / Minus Query: 116 tactccctcggttcctaaatataagtcttttaaaagatttcact 159 ||||| ||| |||| |||||||| |||||| |||||||||||| Sbjct: 2159 tactcactccgttcgtaaatatagttctttttaaagatttcact 2116
>emb|X59253.1|HVLTP1 H.vulgare rearranged Ltp1 gene for lipid transfer protein Length = 1487 Score = 40.1 bits (20), Expect = 4.7 Identities = 38/44 (86%) Strand = Plus / Minus Query: 116 tactccctcggttcctaaatataagtcttttaaaagatttcact 159 ||||| ||| |||| |||||||| |||||| |||||||||||| Sbjct: 1199 tactcactccgttcgtaaatatagttctttttaaagatttcact 1156
>dbj|AK099713.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013084B13, full insert sequence Length = 4389 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 113 aactactccctcggttcctaaatataag 140 |||||||||||| ||||| ||||||||| Sbjct: 1335 aactactccctccgttccaaaatataag 1308
>emb|BX855618.7| Zebrafish DNA sequence from clone CH211-69H5 in linkage group 4, complete sequence Length = 127818 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 tgaagcaaaatgaatgaata 192 |||||||||||||||||||| Sbjct: 13557 tgaagcaaaatgaatgaata 13576
>emb|BX119962.3| Zebrafish DNA sequence from clone CH211-203L9 in linkage group 19, complete sequence Length = 190702 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 gtccattagtgaaaccttta 248 |||||||||||||||||||| Sbjct: 19399 gtccattagtgaaaccttta 19380
>dbj|AP006548.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone: P0705E11 Length = 140729 Score = 40.1 bits (20), Expect = 4.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 111 taaactactccctcggttcctaaatataagtctttt 146 ||||||||||| || ||||| |||||||||| |||| Sbjct: 105761 taaactactccatccgttccaaaatataagtatttt 105796
>emb|CR354563.13| Zebrafish DNA sequence from clone DKEY-210I1 in linkage group 7, complete sequence Length = 147943 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 tgaagcaaaatgaatgaata 192 |||||||||||||||||||| Sbjct: 63142 tgaagcaaaatgaatgaata 63161
>gb|AC087780.19| Mus musculus strain C57BL/6J chromosome 1 clone rp23-324b17, complete sequence Length = 206924 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 tcttttaaaagatttcacta 160 |||||||||||||||||||| Sbjct: 19821 tcttttaaaagatttcacta 19802
>gb|AC174777.2| Mus musculus BAC clone RP23-284K12 from chromosome 16, complete sequence Length = 210964 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 127 ttcctaaatataagtcttttaaaa 150 ||||| |||||||||||||||||| Sbjct: 80318 ttcctcaatataagtcttttaaaa 80295
>emb|AL589986.15| Human DNA sequence from clone RP11-107M16 on chromosome 1 Contains the THH gene for trichohyalin, two novel genes, a family with sequence similarity 16 member A X-linked (FAM16AX) pseudogene, the 5' end of a variant of a novel gene and the gene for a novel S-100/ICaBP type calcium binding domain EF hand domain and Filaggrin domain containing protein, complete sequence Length = 151578 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 taaatataagtcttttaaaa 150 |||||||||||||||||||| Sbjct: 54908 taaatataagtcttttaaaa 54927
>emb|CT030236.7| Mouse DNA sequence from clone RP23-445B11 on chromosome 16, complete sequence Length = 166709 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 170 atatgaagcaaaatgaatgaatat 193 |||| ||||||||||||||||||| Sbjct: 124351 atatcaagcaaaatgaatgaatat 124374
>dbj|AP006696.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT17N21, TM0403, complete sequence Length = 97807 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 116 tactccctcggttcctaaatataa 139 ||||||||| |||||||||||||| Sbjct: 65081 tactccctctgttcctaaatataa 65058
>dbj|AP006689.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT27F14, TM0387, complete sequence Length = 96031 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 aggaacggagggagtagtaa 279 |||||||||||||||||||| Sbjct: 23711 aggaacggagggagtagtaa 23692
>dbj|AP006646.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT04I09, TM0269b, complete sequence Length = 66087 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 aggaacggagggagtagtaa 279 |||||||||||||||||||| Sbjct: 26772 aggaacggagggagtagtaa 26791
>dbj|AP004499.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT16N13, TM0031, complete sequence Length = 97191 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 aggaacggagggagtagtaa 279 |||||||||||||||||||| Sbjct: 7359 aggaacggagggagtagtaa 7340
>gb|AC153541.4| Mus musculus 10 BAC RP23-80P5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 222655 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 tcctaaatataagtctttta 147 |||||||||||||||||||| Sbjct: 117969 tcctaaatataagtctttta 117950 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,910,024 Number of Sequences: 3902068 Number of extensions: 3910024 Number of successful extensions: 109343 Number of sequences better than 10.0: 215 Number of HSP's better than 10.0 without gapping: 228 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 106574 Number of HSP's gapped (non-prelim): 2754 length of query: 353 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 331 effective length of database: 17,147,199,772 effective search space: 5675723124532 effective search space used: 5675723124532 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
