| Clone Name | baal14n14 |
|---|---|
| Clone Library Name | barley_pub |
>TP53B_HUMAN (Q12888) Tumor suppressor p53-binding protein 1 (p53-binding| protein 1) (p53BP1) (53BP1) Length = 1972 Score = 33.5 bits (75), Expect = 0.13 Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 1/80 (1%) Frame = +2 Query: 29 ENLSSQPLILKLLKESTKGCLISSNQVSKGFSRAAE-SVDDLSLDVPSAKTLFDKLLSAA 205 EN+ S PL L L + ++G + K S A E +S+D P + D+ L Sbjct: 682 ENMESVPLHLSLTETQSQGLCLQKEMPKKECSEAMEVETSVISIDSPQKLAILDQELEHK 741 Query: 206 ISEGWLDASFCKSAAPDEDV 265 E W +A+ S+ DV Sbjct: 742 EQEAWEEATSEDSSVVIVDV 761
>IF4G3_HUMAN (O43432) Eukaryotic translation initiation factor 4 gamma 3| (eIF-4-gamma 3) (eIF-4G 3) (eIF4G 3) (eIF-4-gamma II) (eIF4GII) Length = 1585 Score = 31.6 bits (70), Expect = 0.49 Identities = 15/53 (28%), Positives = 27/53 (50%) Frame = +2 Query: 59 KLLKESTKGCLISSNQVSKGFSRAAESVDDLSLDVPSAKTLFDKLLSAAISEG 217 +LL + + +S KGFS E DD+++D+P +L++ + EG Sbjct: 1279 QLLYQLVQSEKLSKQDFFKGFSETLELADDMAIDIPHIWLYLAELVTPMLKEG 1331
>RECX_LACPL (Q88XG5) Regulatory protein recX| Length = 269 Score = 31.2 bits (69), Expect = 0.63 Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 4/90 (4%) Frame = +2 Query: 71 ESTKGCLISSNQVSKGFSRAAESVDDLSLDVPSAKTLFDKLLSAAISEGWLDASFCK--- 241 E + +I+++ VSK ++RA +D LS + + K + DKL I E +DA+ + Sbjct: 49 EQLQAAMIAADDVSKAYTRA---LDYLSHQLRTEKEVHDKLRDEEIDESVIDATMQQLRD 105 Query: 242 -SAAPDEDVWNASSEKVKRFKEESGHIIQE 328 D+ +A KR ++ +I++ Sbjct: 106 MRLLNDQQYADAFVRTAKRTSDKGPRVIRQ 135
>IF4G3_MOUSE (Q80XI3) Eukaryotic translation initiation factor 4 gamma 3| (eIF-4-gamma 3) (eIF-4G 3) (eIF4G 3) (eIF-4-gamma II) (eIF4GII) Length = 1579 Score = 31.2 bits (69), Expect = 0.63 Identities = 15/52 (28%), Positives = 26/52 (50%) Frame = +2 Query: 62 LLKESTKGCLISSNQVSKGFSRAAESVDDLSLDVPSAKTLFDKLLSAAISEG 217 LL + + +S KGFS E DD+++D+P +L++ + EG Sbjct: 1274 LLYQLVQSEKLSKQDFFKGFSETLELADDMAIDIPHIWLYLAELVTPMLKEG 1325
>WPRA_BACSU (P54423) Cell wall-associated protease precursor (EC 3.4.21.-)| [Contains: Cell wall-associated polypeptide CWBP23; Cell wall-associated polypeptide CWBP52] Length = 894 Score = 30.4 bits (67), Expect = 1.1 Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 1/91 (1%) Frame = +2 Query: 62 LLKESTKGCLISSNQVSKGFSRAAESVDDLSLDVPSAKTLFDKLLSAAI-SEGWLDASFC 238 + K L S + KGFS +A+S D+S +V AK LFD L S + + + ++ Sbjct: 324 IFKVKDNKSLSSVHNEMKGFSASAQSKKDIS-NVKKAKKLFDNLYSFELPKDEKQNGAYT 382 Query: 239 KSAAPDEDVWNASSEKVKRFKEESGHIIQEY 331 SA + V +A++ K E +QEY Sbjct: 383 ASA---KRVKSAAATLSKMSNVEFAEPVQEY 410
>HPRT_CRIFA (Q27541) Hypoxanthine-guanine phosphoribosyltransferase (EC| 2.4.2.8) (HGPRT) (HGPRTase) Length = 208 Score = 28.9 bits (63), Expect = 3.2 Identities = 12/39 (30%), Positives = 24/39 (61%) Frame = +2 Query: 236 CKSAAPDEDVWNASSEKVKRFKEESGHIIQEYFLSDDXP 352 C++ A E +W+A+++ K+ E+ ++Y LSD+ P Sbjct: 21 CRTLATQEQIWSATAKCAKQIAED----YKQYNLSDENP 55
>STAD_SOLCO (Q41319) Acyl-[acyl-carrier-protein] desaturase, chloroplast| precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase) Length = 393 Score = 28.9 bits (63), Expect = 3.2 Identities = 24/94 (25%), Positives = 35/94 (37%), Gaps = 12/94 (12%) Frame = +2 Query: 92 ISSNQVSKGFSRAAESVDDLSLDVPSAKT-LFDKLLSAAISEGWLDASFCKSAAPDEDVW 268 + V K FS E ++ +P K +FD L GW D + P E W Sbjct: 39 VEDGNVKKPFSPPREVHVQVTHSMPPEKREIFDSL------HGWADNNILVHLKPVEKCW 92 Query: 269 NAS-----------SEKVKRFKEESGHIIQEYFL 337 AS ++VK +E I +YF+ Sbjct: 93 QASDFLPDPASEGFEDQVKELRERCKEIPDDYFV 126
>ATPF_MESVI (Q9MUT1) ATP synthase B chain (EC 3.6.3.14) (ATPase subunit I)| Length = 186 Score = 28.5 bits (62), Expect = 4.1 Identities = 16/63 (25%), Positives = 30/63 (47%) Frame = +2 Query: 11 ALILGMENLSSQPLILKLLKESTKGCLISSNQVSKGFSRAAESVDDLSLDVPSAKTLFDK 190 A++LG+ S + + LL+ + L S N + + AAE + + AK D+ Sbjct: 36 AVVLGILLTSGREFFVSLLQNRQQNILQSINDADERYKEAAEKLQQAQNEFEQAKLEADQ 95 Query: 191 LLS 199 +L+ Sbjct: 96 ILA 98
>LEXA_STRCL (O86847) LexA repressor (EC 3.4.21.88)| Length = 239 Score = 28.5 bits (62), Expect = 4.1 Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 3/82 (3%) Frame = +2 Query: 83 GCLISSNQVSKGFSRAAESVDDLSLDVPSAKTLFDKLLSAAISEGWLDASFCKSAAPDED 262 G +++ V F + V D L V K + D ++ AAI +G + A + D Sbjct: 130 GPILAEESVEDVFPLPRQLVGDGELFV--LKVVGDSMIEAAICDGDWVTVRRQPVAENGD 187 Query: 263 VWNASSE---KVKRFKEESGHI 319 + A + VKRFK E+GH+ Sbjct: 188 IVAAMLDGEATVKRFKRENGHV 209
>CKX2_ARATH (Q9FUJ3) Cytokinin dehydrogenase 2 precursor (EC 1.5.99.12)| (Cytokinin oxidase 2) (CKO 2) (AtCKX2) Length = 501 Score = 28.5 bits (62), Expect = 4.1 Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 5/84 (5%) Frame = +2 Query: 101 NQVSKGFSRAAESVDDLSLDVPSAKTLFDKLLSAAISEGWLDASFC----KSAAP-DEDV 265 N V K +S L+L P+ + +D +SA I E D + +SA P D Sbjct: 379 NGVVKDILLKQKSASGLALLYPTNRNKWDNRMSAMIPEIDEDVIYIIGLLQSATPKDLPE 438 Query: 266 WNASSEKVKRFKEESGHIIQEYFL 337 + +EK+ RF ++SG I++Y + Sbjct: 439 VESVNEKIIRFCKDSGIKIKQYLM 462
>SYL_SYMTH (Q67SB4) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)| (LeuRS) Length = 861 Score = 28.1 bits (61), Expect = 5.4 Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 3/50 (6%) Frame = -1 Query: 306 SSLKRLTFSL---LAFHTSSSGAADLQNEASSHPSDMAAESSLSKSVLAE 166 +++KR+T L AF+T+ SG ++ N ++ AE + S VLAE Sbjct: 703 ATVKRITADLHDRFAFNTAISGLMEMTNAIYAYREKQHAEQNTSALVLAE 752
>PDIA1_CHICK (P09102) Protein disulfide-isomerase precursor (EC 5.3.4.1) (PDI)| (Prolyl 4-hydroxylase beta subunit) (Cellular thyroid hormone-binding protein) (Retina cognin) (R-cognin) Length = 515 Score = 28.1 bits (61), Expect = 5.4 Identities = 16/51 (31%), Positives = 27/51 (52%) Frame = +2 Query: 38 SSQPLILKLLKESTKGCLISSNQVSKGFSRAAESVDDLSLDVPSAKTLFDK 190 SS+ +++ K+ T + +K F AAESVDD+ + S+ +F K Sbjct: 157 SSEVVVIGFFKDVT-------SDAAKEFLLAAESVDDIPFGISSSADVFSK 200
>LEXA_STRCO (O69979) LexA repressor (EC 3.4.21.88)| Length = 234 Score = 28.1 bits (61), Expect = 5.4 Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 3/82 (3%) Frame = +2 Query: 83 GCLISSNQVSKGFSRAAESVDDLSLDVPSAKTLFDKLLSAAISEGWLDASFCKSAAPDED 262 G +++ V F + V D L V K + D ++ AAI +G + A + D Sbjct: 125 GPILAEESVEDVFPLPRQLVGDGELFV--LKVVGDSMIEAAICDGDWVTVRRQPVAENGD 182 Query: 263 VWNASSE---KVKRFKEESGHI 319 + A + VKRFK E GH+ Sbjct: 183 IVAAMLDGEATVKRFKREDGHV 204
>LEXA_STRAW (Q82KE0) LexA repressor (EC 3.4.21.88)| Length = 234 Score = 28.1 bits (61), Expect = 5.4 Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 3/82 (3%) Frame = +2 Query: 83 GCLISSNQVSKGFSRAAESVDDLSLDVPSAKTLFDKLLSAAISEGWLDASFCKSAAPDED 262 G +++ V F + V D L V K + D ++ AAI +G + A + D Sbjct: 125 GPILAEESVEDVFPLPRQLVGDGELFV--LKVVGDSMIEAAICDGDWVTVRRQPVAENGD 182 Query: 263 VWNASSE---KVKRFKEESGHI 319 + A + VKRFK E GH+ Sbjct: 183 IVAAMLDGEATVKRFKREDGHV 204
>SYFB_BACSK (Q5WEJ6) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)| (Phenylalanine--tRNA ligase beta chain) (PheRS) Length = 808 Score = 28.1 bits (61), Expect = 5.4 Identities = 14/31 (45%), Positives = 19/31 (61%) Frame = +1 Query: 1 GETCSHPWYGESVVAAINPEVVEGINEGLFD 93 G SHPW GE A++ V++GI EGL + Sbjct: 610 GTYMSHPWQGEK--KAVDFYVLKGIAEGLME 638
>SAC3_YEAST (P46674) Leucine permease transcriptional regulator| Length = 1301 Score = 28.1 bits (61), Expect = 5.4 Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 1/44 (2%) Frame = +2 Query: 65 LKESTKGCLISSNQVSKGFSRAAESVDDLSLDVPSA-KTLFDKL 193 L EST L+ N++SK +S E +D ++L S K L DKL Sbjct: 1024 LSESTIKHLLKLNRISKNYSSVIERIDLMNLTEESPHKCLEDKL 1067
>AQP8_HUMAN (O94778) Aquaporin-8 (AQP-8)| Length = 261 Score = 28.1 bits (61), Expect = 5.4 Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 3/45 (6%) Frame = +2 Query: 215 GWLDASFCKSAAPDEDVWNASSEKVKRFKEE---SGHIIQEYFLS 340 G L A+ K+ +P+E WNAS +E+ +G ++ E L+ Sbjct: 121 GMLGAALAKAVSPEERFWNASGAAFVTVQEQGQVAGALVAEIILT 165
>Y1358_LISIN (Q92C33) UPF0090 protein lin1358| Length = 155 Score = 28.1 bits (61), Expect = 5.4 Identities = 18/44 (40%), Positives = 19/44 (43%) Frame = +2 Query: 239 KSAAPDEDVWNASSEKVKRFKEESGHIIQEYFLSDDXPELIRSL 370 K D D A SEKV +ES I Q YFL P R L Sbjct: 43 KDGGVDIDECAAVSEKVSEKMDESDPITQNYFLEVSSPGAERPL 86
>HOXE_CHICK (Q91975) Homeobox protein CHOX-E (CHOX E) (Fragment)| Length = 157 Score = 28.1 bits (61), Expect = 5.4 Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Frame = +2 Query: 173 KTLFDKLLSAAISEGWLDASFCKSAAPDEDVWNASSEKVK-RFKEES 310 + L ++ L + E +L S A+P VW S E+ R+KE+S Sbjct: 71 EVLSNRCLQEGLQENYLSQSAMNFASPCPSVWEVSQEQTSPRWKEKS 117
>TOP1_DROME (P30189) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I)| Length = 972 Score = 28.1 bits (61), Expect = 5.4 Identities = 13/29 (44%), Positives = 18/29 (62%) Frame = -1 Query: 267 HTSSSGAADLQNEASSHPSDMAAESSLSK 181 H SSS + D + +SSH S ++ SS SK Sbjct: 158 HKSSSSSRDKERSSSSHKSSSSSSSSKSK 186
>SER2_GALME (O96615) Sericin-2 (Silk gum protein 2) (Fragment)| Length = 220 Score = 28.1 bits (61), Expect = 5.4 Identities = 15/48 (31%), Positives = 20/48 (41%) Frame = -1 Query: 264 TSSSGAADLQNEASSHPSDMAAESSLSKSVLAEGXXXXXXXXXXXXRE 121 + SSG L +SS S AA SS S+ V A+G + Sbjct: 78 SGSSGIGSLSRNSSSSSSSQAAGSSSSRRVSADGSSSSSSASNSAAAQ 125
>ADD_PSEPK (Q88QA3) Adenosine deaminase (EC 3.5.4.4) (Adenosine| aminohydrolase) Length = 315 Score = 27.7 bits (60), Expect = 7.0 Identities = 29/108 (26%), Positives = 46/108 (42%), Gaps = 10/108 (9%) Frame = +2 Query: 2 VKRALILGMENLS-SQPLILKLLKESTKGCLISSNQVSKGFSRA--------AESVDDLS 154 + +AL G E L S LIL L+ +S ++ K +A A +D Sbjct: 116 ISQALKDGREQLGISSGLILSFLRH------LSEDEAQKTLDQALPFRDAFIAVGLDSSE 169 Query: 155 LDVPSAKTLFDKLLSAAISEGWLDASFCKSAAPDEDVWNA-SSEKVKR 295 + P +K F ++ A SEG++ + P E +W A K+KR Sbjct: 170 MGHPPSK--FQRVFDRARSEGFVAVAHAGEEGPPEYIWEALDLLKIKR 215
>HYALP_CAVPO (P23613) Hyaluronidase PH-20 precursor (EC 3.2.1.35) (Hyal-PH20)| (Sperm surface protein PH-20) (Sperm adhesion molecule 1) Length = 529 Score = 27.7 bits (60), Expect = 7.0 Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 1/41 (2%) Frame = +3 Query: 177 RFLTSCFQ-QPYLKGGLMLHSVNLLHLMKMCGMQAVKRSSV 296 R L SC + Y+KG L+ + +N+ KMCG K + Sbjct: 346 RSLVSCIGLENYMKGTLLPYLINVTLAAKMCGQVLCKNQGI 386
>ZSCA4_HUMAN (Q8NAM6) Zinc finger and SCAN domain-containing protein 4 (Zinc| finger protein 494) Length = 433 Score = 27.3 bits (59), Expect = 9.2 Identities = 10/41 (24%), Positives = 23/41 (56%) Frame = +2 Query: 185 DKLLSAAISEGWLDASFCKSAAPDEDVWNASSEKVKRFKEE 307 D+++S + E ++ C A ++ W +S + ++RF E+ Sbjct: 81 DEIISLLVLEQFMIGGHCNDKASVKEKWKSSGKNLERFIED 121
>PK1IP_BOVIN (Q5EA99) p21-activated protein kinase-interacting protein 1| (PAK1-interacting protein 1) Length = 392 Score = 27.3 bits (59), Expect = 9.2 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 2/39 (5%) Frame = +2 Query: 218 WLDASFCKSAAPDEDVWNA--SSEKVKRFKEESGHIIQE 328 WLD +P A S E+ +R KEESGH +QE Sbjct: 302 WLDRRTDTKESPPAAAEPAPVSKEQSRRNKEESGHAVQE 340
>HMPB_DROME (P31264) Homeotic protein proboscipedia| Length = 782 Score = 27.3 bits (59), Expect = 9.2 Identities = 26/108 (24%), Positives = 48/108 (44%), Gaps = 17/108 (15%) Frame = +2 Query: 68 KESTKGCLISSNQV------SKGFSR-----------AAESVDDLSLDVPSAKTLFDKLL 196 K+S +GC + S+ + S+G + A + SL+ + L Sbjct: 284 KKSCQGCELPSDDIPDSTSNSRGHNNNTPSATNNNPSAGNLTPNSSLETGISSNLMGSTT 343 Query: 197 SAAISEGWLDASFCKSAAPDEDVWNASSEKVKRFKEESGHIIQEYFLS 340 +A + D+S S + DED+ +S KVK K++ G +I++ +S Sbjct: 344 VSASNVISADSSVASSVSLDEDIEESSPIKVK--KKDDGQVIKKEAVS 389
>THIC_LEPIN (Q8F7G5) Thiamine biosynthesis protein thiC| Length = 495 Score = 27.3 bits (59), Expect = 9.2 Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 1/82 (1%) Frame = +2 Query: 65 LKESTKGCLISSNQVSKG-FSRAAESVDDLSLDVPSAKTLFDKLLSAAISEGWLDASFCK 241 L + G + N +SK F E LSLD +AKT D++L + A FC Sbjct: 412 LAKGHPGAIDRDNLLSKARFEFRWEDQFSLSLDPETAKTFHDEMLP---QDRMKTAHFCS 468 Query: 242 SAAPDEDVWNASSEKVKRFKEE 307 P N + E +++F +E Sbjct: 469 MCGPHFCSMNLTQE-LRKFAQE 489
>THIC_LEPIC (Q72NZ8) Thiamine biosynthesis protein thiC| Length = 495 Score = 27.3 bits (59), Expect = 9.2 Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 1/82 (1%) Frame = +2 Query: 65 LKESTKGCLISSNQVSKG-FSRAAESVDDLSLDVPSAKTLFDKLLSAAISEGWLDASFCK 241 L + G + N +SK F E LSLD +AKT D++L + A FC Sbjct: 412 LAKGHPGAIDRDNLLSKARFEFRWEDQFSLSLDPETAKTFHDEMLP---QDRMKTAHFCS 468 Query: 242 SAAPDEDVWNASSEKVKRFKEE 307 P N + E +++F +E Sbjct: 469 MCGPHFCSMNLTQE-LRKFAQE 489
>SIX6_MOUSE (Q9QZ28) Homeobox protein SIX6 (Sine oculis homeobox homolog 6)| (Optic homeobox 2) (Six9 protein) Length = 246 Score = 27.3 bits (59), Expect = 9.2 Identities = 10/30 (33%), Positives = 19/30 (63%) Frame = +2 Query: 263 VWNASSEKVKRFKEESGHIIQEYFLSDDXP 352 +W+ +K FKE + H+++E++L D P Sbjct: 125 IWDGE-QKTHCFKERTRHLLREWYLQDPYP 153
>SIX6_CHICK (O93307) Homeobox protein SIX6 (Sine oculis homeobox homolog 6)| (Optic homeobox 2) (Six9 protein) Length = 246 Score = 27.3 bits (59), Expect = 9.2 Identities = 10/30 (33%), Positives = 19/30 (63%) Frame = +2 Query: 263 VWNASSEKVKRFKEESGHIIQEYFLSDDXP 352 +W+ +K FKE + H+++E++L D P Sbjct: 125 IWDGE-QKTHCFKERTRHLLREWYLQDPYP 153
>FLP1_SCHPO (Q9P7H1) Tyrosine-protein phosphatase CDC14 homolog (EC 3.1.3.48)| (CDC fourteen-like phosphatase 1) Length = 537 Score = 27.3 bits (59), Expect = 9.2 Identities = 12/49 (24%), Positives = 26/49 (53%) Frame = +2 Query: 218 WLDASFCKSAAPDEDVWNASSEKVKRFKEESGHIIQEYFLSDDXPELIR 364 W+ F A+P + WN +S + K+ + I+ +YF+++ ++R Sbjct: 185 WISPKFIAFASPIQAGWNHASTRPKKLPQPFA-IVLDYFVANKVKLIVR 232
>DYHC_DROME (P37276) Dynein heavy chain, cytosolic (DYHC)| Length = 4639 Score = 27.3 bits (59), Expect = 9.2 Identities = 19/68 (27%), Positives = 31/68 (45%) Frame = +2 Query: 74 STKGCLISSNQVSKGFSRAAESVDDLSLDVPSAKTLFDKLLSAAISEGWLDASFCKSAAP 253 S +G L + V + ESV+ L+L +P + L +K+ S WL S + P Sbjct: 3896 SREGLLANPTPVEGLSAEQIESVNRLALRLPIFRKLLEKVRSIPELGAWLQQSSPEQVVP 3955 Query: 254 DEDVWNAS 277 +W+ S Sbjct: 3956 --QLWDES 3961 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 44,140,633 Number of Sequences: 219361 Number of extensions: 717565 Number of successful extensions: 2433 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 2387 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2433 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 1396778976 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)