ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal15c11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AB073084.1| Hordeum vulgare HvProT mRNA for proline transpor... 700 0.0
2emb|X95737.1|ATPROT1 A.thaliana mRNA for proline transporter 1 76 9e-11
3gb|AC145383.3| Oryza sativa chromosome 3 BAC OSJNBa0038E17 genom... 72 1e-09
4gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 72 1e-09
5emb|AL713930.5|CNS07YP7 Oryza sativa chromosome 3, . BAC OSJNBa0... 72 1e-09
6dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 72 1e-09
7dbj|AK067118.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 1e-09
8dbj|AK062005.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 1e-09
9dbj|AB022783.1| Oryza sativa mRNA for amino acid permease, compl... 72 1e-09
10gb|AY108640.1| Zea mays PCO121284 mRNA sequence 66 8e-08
11dbj|AB075903.2| Avicennia marina Bet/ProT2 mRNA for betaine/prol... 66 8e-08
12dbj|AB075902.2| Avicennia marina Bet/ProT1 mRNA for betaine/prol... 66 8e-08
13ref|NM_129215.2| Arabidopsis thaliana ProT3 (PROLINE TRANSPORTER... 62 1e-06
14ref|NM_129547.2| Arabidopsis thaliana ProT1; amino acid permease... 62 1e-06
15gb|AF002109.3| Arabidopsis thaliana chromosome 2 clone T28M21 ma... 62 1e-06
16gb|AC006919.6| Arabidopsis thaliana chromosome 2 clone F1O11 map... 62 1e-06
17emb|BX820750.1|CNS0A8L6 Arabidopsis thaliana Full-length cDNA Co... 62 1e-06
18gb|BT004018.1| Arabidopsis thaliana clone RAFL15-21-B12 (R20531)... 62 1e-06
19gb|AY087868.1| Arabidopsis thaliana clone 39048 mRNA, complete s... 62 1e-06
20gb|AY086068.1| Arabidopsis thaliana clone 20959 mRNA, complete s... 62 1e-06
21ref|XM_476343.1| Oryza sativa (japonica cultivar-group), mRNA 58 2e-05
22dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 58 2e-05
23dbj|AP005869.3| Oryza sativa (japonica cultivar-group) genomic D... 58 2e-05
24dbj|AK066298.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 2e-05
25dbj|AB075904.1| Avicennia marina Bet/ProT3 mRNA for betaine/prol... 50 0.005
26emb|BX821223.1|CNS0AA5Y Arabidopsis thaliana Full-length cDNA Co... 46 0.076
27gb|AC160993.5| Mus musculus BAC clone RP23-159D11 from chromosom... 44 0.30
28gb|AC154449.2| Mus musculus BAC clone RP24-168F5 from chromosome... 44 0.30
29gb|AF274032.1|AF274032 Atriplex hortensis proline/glycine betain... 44 0.30
30gb|AC091537.2| Rattus norvegicus strain Brown Norway clone RP31-... 42 1.2
31gb|AC091000.2| Rattus norvegicus strain Brown Norway clone RP31-... 42 1.2
32ref|XM_683201.1| PREDICTED: Danio rerio similar to secreted prot... 42 1.2
33emb|BX890577.6| Zebrafish DNA sequence from clone CH211-95G8, co... 42 1.2
34gb|AC008046.4|AC008046 Arabidopsis thaliana chromosome I BAC F5A... 42 1.2
35gb|AC102176.8| Mus musculus chromosome 15, clone RP23-480E14, co... 40 4.7
36gb|AC170862.1| Mus musculus chromosome 19, clone wi1-593J16, com... 40 4.7
37ref|XM_475979.1| Oryza sativa (japonica cultivar-group), predic... 40 4.7
38gb|AC169699.1| Rhesus Macaque BAC CH250-12P18 (Children's Hospi... 40 4.7
39gb|AC098598.2| Oryza sativa (japonica cultivar-group) chromosome... 40 4.7
40emb|AL139794.3|LMFLCHR4B Leishmania major Friedlin chromosome 4,... 40 4.7
41gb|AC127326.4| Mus musculus BAC clone RP23-251C4 from 8, complet... 40 4.7
42gb|AC161593.2| Mus musculus BAC clone RP24-187P11 from chromosom... 40 4.7
43dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, co... 40 4.7
44gb|DQ096803.1| Crocidura russula clone CRY8 microsatellite sequence 40 4.7
45gb|DQ096802.1| Crocidura russula clone CRY7 microsatellite sequence 40 4.7
46gb|DQ096801.1| Crocidura russula clone CRY6 microsatellite sequence 40 4.7
47gb|AC026708.6| Homo sapiens chromosome 5 clone CTD-2078B5, compl... 40 4.7
48dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.7
49gb|AC108673.11| Homo sapiens 3 BAC RP11-434H6 (Roswell Park Canc... 40 4.7
50dbj|AK106883.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.7
51gb|AC164438.3| Mus musculus BAC clone RP23-62L19 from chromosome... 40 4.7 
>dbj|AB073084.1| Hordeum vulgare HvProT mRNA for proline transporter, complete cds
          Length = 2161

 Score =  700 bits (353), Expect = 0.0
 Identities = 353/353 (100%)
 Strand = Plus / Plus

                                                                        
Query: 2    gtgtggatcaaggcagttgccaacctctctgccttcctccagacagtcatagcactacac 61
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1102 gtgtggatcaaggcagttgccaacctctctgccttcctccagacagtcatagcactacac 1161

                                                                        
Query: 62   atcttcgcgtcgcccatgtacgagtacctggacacccggttcgggagcaaggtgggaggc 121
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1162 atcttcgcgtcgcccatgtacgagtacctggacacccggttcgggagcaaggtgggaggc 1221

                                                                        
Query: 122  ccgttcgcgatgcacaacgtgatattcagggtgggcgtgaggggagggtacctggccgtc 181
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1222 ccgttcgcgatgcacaacgtgatattcagggtgggcgtgaggggagggtacctggccgtc 1281

                                                                        
Query: 182  aacacgctcatggccgcgatgctgcccttcctgggggacttcatgagcctcactggggcg 241
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1282 aacacgctcatggccgcgatgctgcccttcctgggggacttcatgagcctcactggggcg 1341

                                                                        
Query: 242  ctcagcacattccctctcaccttcgtgctcgccaaccatatgtacctcgtctccaacagg 301
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1342 ctcagcacattccctctcaccttcgtgctcgccaaccatatgtacctcgtctccaacagg 1401

                                                                 
Query: 302  caacgcctctcctcgctgcagaagtcatggcactggctcaacatcgtcttctt 354
            |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1402 caacgcctctcctcgctgcagaagtcatggcactggctcaacatcgtcttctt 1454
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>emb|X95737.1|ATPROT1 A.thaliana mRNA for proline transporter 1
          Length = 1490

 Score = 75.8 bits (38), Expect = 9e-11
 Identities = 74/86 (86%)
 Strand = Plus / Plus

                                                                        
Query: 201  tgctgcccttcctgggggacttcatgagcctcactggggcgctcagcacattccctctca 260
            ||||||| ||||| || |||||||||||||| ||||| ||  | ||||||||||||||||
Sbjct: 1127 tgctgccgttcctcggtgacttcatgagcctaactggtgcagtgagcacattccctctca 1186

                                      
Query: 261  ccttcgtgctcgccaaccatatgtac 286
            | ||| | || |||||||||||||||
Sbjct: 1187 cattcattctagccaaccatatgtac 1212
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>gb|AC145383.3| Oryza sativa chromosome 3 BAC OSJNBa0038E17 genomic sequence, complete
              sequence
          Length = 141691

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 87/104 (83%)
 Strand = Plus / Minus

                                                                          
Query: 146    ttcagggtgggcgtgaggggagggtacctggccgtcaacacgctcatggccgcgatgctg 205
              ||||| ||||| || || ||||| |||||| ||||||||||  |  ||||||||||||| 
Sbjct: 114397 ttcagagtgggtgtcagaggaggctacctgaccgtcaacaccttggtggccgcgatgctc 114338

                                                          
Query: 206    cccttcctgggggacttcatgagcctcactggggcgctcagcac 249
              |||||||| || |||||||||||||| || || || ||||||||
Sbjct: 114337 cccttccttggcgacttcatgagcctgacgggtgcactcagcac 114294
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 87/104 (83%)
 Strand = Plus / Minus

                                                                            
Query: 146      ttcagggtgggcgtgaggggagggtacctggccgtcaacacgctcatggccgcgatgctg 205
                ||||| ||||| || || ||||| |||||| ||||||||||  |  ||||||||||||| 
Sbjct: 24738850 ttcagagtgggtgtcagaggaggctacctgaccgtcaacaccttggtggccgcgatgctc 24738791

                                                            
Query: 206      cccttcctgggggacttcatgagcctcactggggcgctcagcac 249
                |||||||| || |||||||||||||| || || || ||||||||
Sbjct: 24738790 cccttccttggcgacttcatgagcctgacgggtgcactcagcac 24738747
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>emb|AL713930.5|CNS07YP7 Oryza sativa chromosome 3, . BAC OSJNBa0007L18 of library OSJNBa from
             chromosome 3 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 183327

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 87/104 (83%)
 Strand = Plus / Minus

                                                                         
Query: 146   ttcagggtgggcgtgaggggagggtacctggccgtcaacacgctcatggccgcgatgctg 205
             ||||| ||||| || || ||||| |||||| ||||||||||  |  ||||||||||||| 
Sbjct: 34369 ttcagagtgggtgtcagaggaggctacctgaccgtcaacaccttggtggccgcgatgctc 34310

                                                         
Query: 206   cccttcctgggggacttcatgagcctcactggggcgctcagcac 249
             |||||||| || |||||||||||||| || || || ||||||||
Sbjct: 34309 cccttccttggcgacttcatgagcctgacgggtgcactcagcac 34266
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 87/104 (83%)
 Strand = Plus / Minus

                                                                            
Query: 146      ttcagggtgggcgtgaggggagggtacctggccgtcaacacgctcatggccgcgatgctg 205
                ||||| ||||| || || ||||| |||||| ||||||||||  |  ||||||||||||| 
Sbjct: 24655680 ttcagagtgggtgtcagaggaggctacctgaccgtcaacaccttggtggccgcgatgctc 24655621

                                                            
Query: 206      cccttcctgggggacttcatgagcctcactggggcgctcagcac 249
                |||||||| || |||||||||||||| || || || ||||||||
Sbjct: 24655620 cccttccttggcgacttcatgagcctgacgggtgcactcagcac 24655577
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>dbj|AK067118.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096E03, full
            insert sequence
          Length = 2278

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 87/104 (83%)
 Strand = Plus / Plus

                                                                        
Query: 146  ttcagggtgggcgtgaggggagggtacctggccgtcaacacgctcatggccgcgatgctg 205
            ||||| ||||| || || ||||| |||||| ||||||||||  |  ||||||||||||| 
Sbjct: 1690 ttcagagtgggtgtcagaggaggctacctgaccgtcaacaccttggtggccgcgatgctc 1749

                                                        
Query: 206  cccttcctgggggacttcatgagcctcactggggcgctcagcac 249
            |||||||| || |||||||||||||| || || || ||||||||
Sbjct: 1750 cccttccttggcgacttcatgagcctgacgggtgcactcagcac 1793
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>dbj|AK062005.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-D10, full
            insert sequence
          Length = 1690

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 87/104 (83%)
 Strand = Plus / Plus

                                                                        
Query: 146  ttcagggtgggcgtgaggggagggtacctggccgtcaacacgctcatggccgcgatgctg 205
            ||||| ||||| || || ||||| |||||| ||||||||||  |  ||||||||||||| 
Sbjct: 1119 ttcagagtgggtgtcagaggaggctacctgaccgtcaacaccttggtggccgcgatgctc 1178

                                                        
Query: 206  cccttcctgggggacttcatgagcctcactggggcgctcagcac 249
            |||||||| || |||||||||||||| || || || ||||||||
Sbjct: 1179 cccttccttggcgacttcatgagcctgacgggtgcactcagcac 1222
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>dbj|AB022783.1| Oryza sativa mRNA for amino acid permease, complete cds
          Length = 1863

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 87/104 (83%)
 Strand = Plus / Plus

                                                                        
Query: 146  ttcagggtgggcgtgaggggagggtacctggccgtcaacacgctcatggccgcgatgctg 205
            ||||| ||||| || || ||||| |||||| ||||||||||  |  ||||||||||||| 
Sbjct: 1269 ttcagagtgggtgtcagaggaggctacctgaccgtcaacaccttggtggccgcgatgctc 1328

                                                        
Query: 206  cccttcctgggggacttcatgagcctcactggggcgctcagcac 249
            |||||||| || |||||||||||||| || || || ||||||||
Sbjct: 1329 cccttccttggcgacttcatgagcctgacgggtgcactcagcac 1372
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>gb|AY108640.1| Zea mays PCO121284 mRNA sequence
          Length = 1610

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 102/125 (81%)
 Strand = Plus / Plus

                                                                        
Query: 164  ggagggtacctggccgtcaacacgctcatggccgcgatgctgcccttcctgggggacttc 223
            ||||| |||||| | || ||||||||  |||||||| |||| || ||||| || ||||||
Sbjct: 1185 ggaggctacctgacggtgaacacgctggtggccgcggtgctcccattcctcggcgacttc 1244

                                                                        
Query: 224  atgagcctcactggggcgctcagcacattccctctcaccttcgtgctcgccaaccatatg 283
            |||||||| || || || |||||||| ||||| || || || |||||||| || || |||
Sbjct: 1245 atgagcctgacgggcgccctcagcaccttcccgctgacgtttgtgctcgcaaatcacatg 1304

                 
Query: 284  tacct 288
            |||||
Sbjct: 1305 tacct 1309
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>dbj|AB075903.2| Avicennia marina Bet/ProT2 mRNA for betaine/proline transporter,
            complete cds
          Length = 1640

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 54/61 (88%)
 Strand = Plus / Plus

                                                                        
Query: 201  tgctgcccttcctgggggacttcatgagcctcactggggcgctcagcacattccctctca 260
            ||||||| ||| ||||||| |||||||||||||| ||||| |||||||| || |||||||
Sbjct: 1240 tgctgccattcttgggggatttcatgagcctcacgggggccctcagcacgtttcctctca 1299

             
Query: 261  c 261
            |
Sbjct: 1300 c 1300
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>dbj|AB075902.2| Avicennia marina Bet/ProT1 mRNA for betaine/proline transporter,
            complete cds
          Length = 1726

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 72/85 (84%)
 Strand = Plus / Plus

                                                                        
Query: 201  tgctgcccttcctgggggacttcatgagcctcactggggcgctcagcacattccctctca 260
            ||||||| || ||||| |||||||||||||| || |||||  ||||||||||||| || |
Sbjct: 1220 tgctgccttttctgggagacttcatgagcctaacgggggctatcagcacattccccctta 1279

                                     
Query: 261  ccttcgtgctcgccaaccatatgta 285
            ||||| | || |||||||| |||||
Sbjct: 1280 ccttcattcttgccaaccacatgta 1304
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>ref|NM_129215.2| Arabidopsis thaliana ProT3 (PROLINE TRANSPORTER 3); amino acid
            permease AT2G36590 (ProT3) mRNA, complete cds
          Length = 1924

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 70/83 (84%)
 Strand = Plus / Plus

                                                                        
Query: 204  tgcccttcctgggggacttcatgagcctcactggggcgctcagcacattccctctcacct 263
            |||| ||||| ||||||||||||||||||||||| ||  | ||||||||||| || || |
Sbjct: 1243 tgccgttccttggggacttcatgagcctcactggtgcagtgagcacattcccccttacat 1302

                                   
Query: 264  tcgtgctcgccaaccatatgtac 286
            || | || |||||||| ||||||
Sbjct: 1303 tcattctagccaaccacatgtac 1325
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>ref|NM_129547.2| Arabidopsis thaliana ProT1; amino acid permease AT2G39890 (ProT1)
            mRNA, complete cds
          Length = 1801

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 70/83 (84%)
 Strand = Plus / Plus

                                                                        
Query: 204  tgcccttcctgggggacttcatgagcctcactggggcgctcagcacattccctctcacct 263
            |||| ||||| || |||||||||||||| ||||| ||  | ||||||||||||||||| |
Sbjct: 1434 tgccgttcctcggtgacttcatgagcctaactggtgcagtgagcacattccctctcacat 1493

                                   
Query: 264  tcgtgctcgccaaccatatgtac 286
            || | || |||||||| ||||||
Sbjct: 1494 tcattctagccaaccacatgtac 1516
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>gb|AF002109.3| Arabidopsis thaliana chromosome 2 clone T28M21 map CIC10A06, complete
             sequence
          Length = 108847

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 70/83 (84%)
 Strand = Plus / Plus

                                                                         
Query: 204   tgcccttcctgggggacttcatgagcctcactggggcgctcagcacattccctctcacct 263
             |||| ||||| || |||||||||||||| ||||| ||  | ||||||||||||||||| |
Sbjct: 26625 tgccgttcctcggtgacttcatgagcctaactggtgcagtgagcacattccctctcacat 26684

                                    
Query: 264   tcgtgctcgccaaccatatgtac 286
             || | || |||||||| ||||||
Sbjct: 26685 tcattctagccaaccacatgtac 26707
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>gb|AC006919.6| Arabidopsis thaliana chromosome 2 clone F1O11 map g6825, complete
             sequence
          Length = 104364

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 70/83 (84%)
 Strand = Plus / Minus

                                                                         
Query: 204   tgcccttcctgggggacttcatgagcctcactggggcgctcagcacattccctctcacct 263
             |||| ||||| ||||||||||||||||||||||| ||  | ||||||||||| || || |
Sbjct: 92408 tgccgttccttggggacttcatgagcctcactggtgcagtgagcacattcccccttacat 92349

                                    
Query: 264   tcgtgctcgccaaccatatgtac 286
             || | || |||||||| ||||||
Sbjct: 92348 tcattctagccaaccacatgtac 92326
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>emb|BX820750.1|CNS0A8L6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH66ZG12 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1570

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 70/83 (84%)
 Strand = Plus / Plus

                                                                        
Query: 204  tgcccttcctgggggacttcatgagcctcactggggcgctcagcacattccctctcacct 263
            |||| ||||| || |||||||||||||| ||||| ||  | ||||||||||||||||| |
Sbjct: 1321 tgccgttcctcggtgacttcatgagcctaactggtgcagtgagcacattccctctcacat 1380

                                   
Query: 264  tcgtgctcgccaaccatatgtac 286
            || | || |||||||| ||||||
Sbjct: 1381 tcattctagccaaccacatgtac 1403
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>gb|BT004018.1| Arabidopsis thaliana clone RAFL15-21-B12 (R20531) putative proline
            transporter (At2g36590) mRNA, complete cds
          Length = 1538

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 70/83 (84%)
 Strand = Plus / Plus

                                                                        
Query: 204  tgcccttcctgggggacttcatgagcctcactggggcgctcagcacattccctctcacct 263
            |||| ||||| ||||||||||||||||||||||| ||  | ||||||||||| || || |
Sbjct: 1168 tgccgttccttggggacttcatgagcctcactggtgcagtgagcacattcccccttacat 1227

                                   
Query: 264  tcgtgctcgccaaccatatgtac 286
            || | || |||||||| ||||||
Sbjct: 1228 tcattctagccaaccacatgtac 1250
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>gb|AY087868.1| Arabidopsis thaliana clone 39048 mRNA, complete sequence
          Length = 1682

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 70/83 (84%)
 Strand = Plus / Plus

                                                                        
Query: 204  tgcccttcctgggggacttcatgagcctcactggggcgctcagcacattccctctcacct 263
            |||| ||||| || |||||||||||||| ||||| ||  | ||||||||||||||||| |
Sbjct: 1322 tgccgttcctcggtgacttcatgagcctaactggtgcagtgagcacattccctctcacat 1381

                                   
Query: 264  tcgtgctcgccaaccatatgtac 286
            || | || |||||||| ||||||
Sbjct: 1382 tcattctagccaaccacatgtac 1404
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>gb|AY086068.1| Arabidopsis thaliana clone 20959 mRNA, complete sequence
          Length = 1544

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 70/83 (84%)
 Strand = Plus / Plus

                                                                        
Query: 204  tgcccttcctgggggacttcatgagcctcactggggcgctcagcacattccctctcacct 263
            |||| ||||| ||||||||||||||||||||||| ||  | ||||||||||| || || |
Sbjct: 1243 tgccgttccttggggacttcatgagcctcactggtgcagtgagcacattcccccttacat 1302

                                   
Query: 264  tcgtgctcgccaaccatatgtac 286
            || | || |||||||| ||||||
Sbjct: 1303 tcattctagccaaccacatgtac 1325
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>ref|XM_476343.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1591

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 110/137 (80%)
 Strand = Plus / Plus

                                                                        
Query: 119  ggcccgttcgcgatgcacaacgtgatattcagggtgggcgtgaggggagggtacctggcc 178
            ||||| || ||||| ||||| ||||| ||||| ||||| || || ||||| |||||| | 
Sbjct: 1056 ggcccttttgcgatccacaatgtgatgttcagagtgggtgtaagaggaggctacctgact 1115

                                                                        
Query: 179  gtcaacacgctcatggccgcgatgctgcccttcctgggggacttcatgagcctcactggg 238
            ||||||||  |  | || |||||||| || ||||| || |||||||||||||| || || 
Sbjct: 1116 gtcaacaccttggtagctgcgatgctcccattccttggcgacttcatgagcctgaccgga 1175

                             
Query: 239  gcgctcagcacattccc 255
            || |||||||| |||||
Sbjct: 1176 gctctcagcaccttccc 1192
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7,
             complete sequence
          Length = 29644043

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 110/137 (80%)
 Strand = Plus / Minus

                                                                         
Query: 119   ggcccgttcgcgatgcacaacgtgatattcagggtgggcgtgaggggagggtacctggcc 178
             ||||| || ||||| ||||| ||||| ||||| ||||| || || ||||| |||||| | 
Sbjct: 48322 ggcccttttgcgatccacaatgtgatgttcagagtgggtgtaagaggaggctacctgact 48263

                                                                         
Query: 179   gtcaacacgctcatggccgcgatgctgcccttcctgggggacttcatgagcctcactggg 238
             ||||||||  |  | || |||||||| || ||||| || |||||||||||||| || || 
Sbjct: 48262 gtcaacaccttggtagctgcgatgctcccattccttggcgacttcatgagcctgaccgga 48203

                              
Query: 239   gcgctcagcacattccc 255
             || |||||||| |||||
Sbjct: 48202 gctctcagcaccttccc 48186
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>dbj|AP005869.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:B1026C12
          Length = 170240

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 110/137 (80%)
 Strand = Plus / Minus

                                                                         
Query: 119   ggcccgttcgcgatgcacaacgtgatattcagggtgggcgtgaggggagggtacctggcc 178
             ||||| || ||||| ||||| ||||| ||||| ||||| || || ||||| |||||| | 
Sbjct: 47621 ggcccttttgcgatccacaatgtgatgttcagagtgggtgtaagaggaggctacctgact 47562

                                                                         
Query: 179   gtcaacacgctcatggccgcgatgctgcccttcctgggggacttcatgagcctcactggg 238
             ||||||||  |  | || |||||||| || ||||| || |||||||||||||| || || 
Sbjct: 47561 gtcaacaccttggtagctgcgatgctcccattccttggcgacttcatgagcctgaccgga 47502

                              
Query: 239   gcgctcagcacattccc 255
             || |||||||| |||||
Sbjct: 47501 gctctcagcaccttccc 47485
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>dbj|AK066298.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013062C01, full
            insert sequence
          Length = 1591

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 110/137 (80%)
 Strand = Plus / Plus

                                                                        
Query: 119  ggcccgttcgcgatgcacaacgtgatattcagggtgggcgtgaggggagggtacctggcc 178
            ||||| || ||||| ||||| ||||| ||||| ||||| || || ||||| |||||| | 
Sbjct: 1056 ggcccttttgcgatccacaatgtgatgttcagagtgggtgtaagaggaggctacctgact 1115

                                                                        
Query: 179  gtcaacacgctcatggccgcgatgctgcccttcctgggggacttcatgagcctcactggg 238
            ||||||||  |  | || |||||||| || ||||| || |||||||||||||| || || 
Sbjct: 1116 gtcaacaccttggtagctgcgatgctcccattccttggcgacttcatgagcctgaccgga 1175

                             
Query: 239  gcgctcagcacattccc 255
            || |||||||| |||||
Sbjct: 1176 gctctcagcaccttccc 1192
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>dbj|AB075904.1| Avicennia marina Bet/ProT3 mRNA for betaine/proline transporter,
            partial cds
          Length = 1432

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 55/65 (84%)
 Strand = Plus / Plus

                                                                        
Query: 221  ttcatgagcctcactggggcgctcagcacattccctctcaccttcgtgctcgccaaccat 280
            ||||||||||| || ||||| |||||||| || || ||||||||| | || |||||||| 
Sbjct: 1102 ttcatgagcctgacgggggctctcagcacgtttcccctcaccttcattcttgccaaccac 1161

                 
Query: 281  atgta 285
            |||||
Sbjct: 1162 atgta 1166
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>emb|BX821223.1|CNS0AA5Y Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL26ZF09 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 550

 Score = 46.1 bits (23), Expect = 0.076
 Identities = 68/83 (81%)
 Strand = Plus / Plus

                                                                       
Query: 204 tgcccttcctgggggacttcatgagcctcactggggcgctcagcacattccctctcacct 263
           |||| ||||| || |||||||||||||| ||||| ||  | || ||||||| |||||| |
Sbjct: 186 tgccgttcctcggtgacttcatgagcctaactggtgcagtgagtacattccttctcacat 245

                                  
Query: 264 tcgtgctcgccaaccatatgtac 286
           || | || |||||||| ||||||
Sbjct: 246 tcattctagccaaccacatgtac 268
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>gb|AC160993.5| Mus musculus BAC clone RP23-159D11 from chromosome 16, complete sequence
          Length = 187536

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 34     cttcctccagacagtcatagca 55
              ||||||||||||||||||||||
Sbjct: 180187 cttcctccagacagtcatagca 180208
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>gb|AC154449.2| Mus musculus BAC clone RP24-168F5 from chromosome 16, complete sequence
          Length = 137395

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 34    cttcctccagacagtcatagca 55
             ||||||||||||||||||||||
Sbjct: 10739 cttcctccagacagtcatagca 10760
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>gb|AF274032.1|AF274032 Atriplex hortensis proline/glycine betaine transporter mRNA, complete
            cds
          Length = 1684

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                        
Query: 203  ctgcccttcctgggggacttcatgagcctcactggggcgctcagcacattccctctcacc 262
            ||||| ||||| ||||| ||||||||||| || || ||  ||||||| ||||| ||||||
Sbjct: 1180 ctgcctttcctaggggatttcatgagccttacaggagcaatcagcaccttcccgctcacc 1239

              
Query: 263  tt 264
            ||
Sbjct: 1240 tt 1241
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>gb|AC091537.2| Rattus norvegicus strain Brown Norway clone RP31-78C13, complete
             sequence
          Length = 119664

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 147   tcagggtgggcgtgaggggag 167
             |||||||||||||||||||||
Sbjct: 23821 tcagggtgggcgtgaggggag 23841
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>gb|AC091000.2| Rattus norvegicus strain Brown Norway clone RP31-485F9, complete sequence
          Length = 168533

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 147    tcagggtgggcgtgaggggag 167
              |||||||||||||||||||||
Sbjct: 159821 tcagggtgggcgtgaggggag 159841
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>ref|XM_683201.1| PREDICTED: Danio rerio similar to secreted protein SST3 (LOC559825),
            mRNA
          Length = 8469

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 10   caaggcagttgccaacctctc 30
            |||||||||||||||||||||
Sbjct: 4428 caaggcagttgccaacctctc 4408
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>emb|BX890577.6| Zebrafish DNA sequence from clone CH211-95G8, complete sequence
          Length = 114934

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 10    caaggcagttgccaacctctc 30
             |||||||||||||||||||||
Sbjct: 47912 caaggcagttgccaacctctc 47892
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>gb|AC008046.4|AC008046 Arabidopsis thaliana chromosome I BAC F5A13 genomic sequence, complete
             sequence
          Length = 94618

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                      
Query: 221   ttcatgagcctcactggggcgctcagcacattccctctcac 261
             ||||||||||||||||| ||  | ||||| |||||||||||
Sbjct: 44706 ttcatgagcctcactggagcaataagcacgttccctctcac 44746
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>gb|AC102176.8| Mus musculus chromosome 15, clone RP23-480E14, complete sequence
          Length = 181577

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 19    tgccaacctctctgccttcc 38
             ||||||||||||||||||||
Sbjct: 25508 tgccaacctctctgccttcc 25527
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>gb|AC170862.1| Mus musculus chromosome 19, clone wi1-593J16, complete sequence
          Length = 40693

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 20    gccaacctctctgccttcct 39
             ||||||||||||||||||||
Sbjct: 21563 gccaacctctctgccttcct 21544
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>ref|XM_475979.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1446

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 192  tggccgcgatgctgcccttc 211
            ||||||||||||||||||||
Sbjct: 1187 tggccgcgatgctgcccttc 1206
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>gb|AC169699.1| Rhesus Macaque  BAC CH250-12P18 (Children's Hospital Oakland Research
              Institute Rhesus macaque Adult Male BAC Library) complete
              sequence
          Length = 209387

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 21     ccaacctctctgccttcctc 40
              ||||||||||||||||||||
Sbjct: 205704 ccaacctctctgccttcctc 205685
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>gb|AC098598.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1007_H05,
             complete sequence
          Length = 108479

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 192   tggccgcgatgctgcccttc 211
             ||||||||||||||||||||
Sbjct: 13704 tggccgcgatgctgcccttc 13723
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>emb|AL139794.3|LMFLCHR4B Leishmania major Friedlin chromosome 4, right end
          Length = 247462

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 149   agggtgggcgtgaggggagg 168
             ||||||||||||||||||||
Sbjct: 53751 agggtgggcgtgaggggagg 53770
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>gb|AC127326.4| Mus musculus BAC clone RP23-251C4 from 8, complete sequence
          Length = 207802

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     ggtgtggatcaaggcagttg 20
             ||||||||||||||||||||
Sbjct: 30064 ggtgtggatcaaggcagttg 30045
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>gb|AC161593.2| Mus musculus BAC clone RP24-187P11 from chromosome 9, complete sequence
          Length = 155445

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 200   atgctgcccttcctggggga 219
             ||||||||||||||||||||
Sbjct: 46994 atgctgcccttcctggggga 46975
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>dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, complete genome
          Length = 5727534

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 104     gggagcaaggtgggaggccc 123
               ||||||||||||||||||||
Sbjct: 3260732 gggagcaaggtgggaggccc 3260751
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>gb|DQ096803.1| Crocidura russula clone CRY8 microsatellite sequence
          Length = 1451

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 21 ccaacctctctgccttcctc 40
          ||||||||||||||||||||
Sbjct: 8  ccaacctctctgccttcctc 27
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>gb|DQ096802.1| Crocidura russula clone CRY7 microsatellite sequence
          Length = 815

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 21 ccaacctctctgccttcctc 40
          ||||||||||||||||||||
Sbjct: 58 ccaacctctctgccttcctc 39
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>gb|DQ096801.1| Crocidura russula clone CRY6 microsatellite sequence
          Length = 445

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 21 ccaacctctctgccttcctc 40
          ||||||||||||||||||||
Sbjct: 83 ccaacctctctgccttcctc 64
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>gb|AC026708.6| Homo sapiens chromosome 5 clone CTD-2078B5, complete sequence
          Length = 142047

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 31    tgccttcctccagacagtcatagc 54
             ||||||||||||||||| ||||||
Sbjct: 90263 tgccttcctccagacagacatagc 90286
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 192      tggccgcgatgctgcccttc 211
                ||||||||||||||||||||
Sbjct: 29003649 tggccgcgatgctgcccttc 29003668
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>gb|AC108673.11| Homo sapiens 3 BAC RP11-434H6 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 137864

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 161   aggggagggtacctggccgt 180
             ||||||||||||||||||||
Sbjct: 57319 aggggagggtacctggccgt 57300
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>dbj|AK106883.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-118-F05, full
            insert sequence
          Length = 1760

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 192  tggccgcgatgctgcccttc 211
            ||||||||||||||||||||
Sbjct: 1266 tggccgcgatgctgcccttc 1285
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>gb|AC164438.3| Mus musculus BAC clone RP23-62L19 from chromosome 9, complete sequence
          Length = 205793

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 200    atgctgcccttcctggggga 219
              ||||||||||||||||||||
Sbjct: 193317 atgctgcccttcctggggga 193298


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,277,857
Number of Sequences: 3902068
Number of extensions: 2277857
Number of successful extensions: 42896
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 42786
Number of HSP's gapped (non-prelim): 110
length of query: 354
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 332
effective length of database: 17,147,199,772
effective search space: 5692870324304
effective search space used: 5692870324304
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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