ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal15b06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK103126.1| Oryza sativa (japonica cultivar-group) cDNA clon... 268 1e-68
2dbj|AB026564.1| Oryza sativa (japonica cultivar-group) OsPBB1 mR... 268 1e-68
3ref|XM_476072.1| Oryza sativa (japonica cultivar-group), predic... 264 2e-67
4gb|BT017621.1| Zea mays clone EL01N0435E12.c mRNA sequence 258 1e-65
5gb|AY105052.1| Zea mays PCO138078 mRNA sequence 250 3e-63
6dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 204 1e-49
7gb|AC093954.2| Oryza sativa (japonica cultivar-group) chromosome... 204 1e-49
8ref|NM_180310.1| Arabidopsis thaliana PBB1; endopeptidase/ pepti... 113 4e-22
9ref|NM_113658.2| Arabidopsis thaliana PBB1; endopeptidase/ pepti... 113 4e-22
10emb|Y13178.1|ATY13178 Arabidopsis thaliana mRNA for proteasome s... 113 4e-22
11gb|BT006306.1| Arabidopsis thaliana At3g27430 mRNA, complete cds 113 4e-22
12gb|BT003339.1| Arabidopsis thaliana 20S proteasome beta subunit ... 113 4e-22
13gb|AY086464.1| Arabidopsis thaliana clone 25264 mRNA, complete s... 113 4e-22
14gb|AF043530.1|AF043530 Arabidopsis thaliana 20S proteasome beta ... 113 4e-22
15dbj|AB024028.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 105 9e-20
16gb|AC150800.3| Medicago truncatula chromosome 7 BAC clone mth2-7... 103 4e-19
17dbj|AK058440.1| Oryza sativa (japonica cultivar-group) cDNA clon... 98 2e-17
18ref|NM_180777.1| Arabidopsis thaliana PBB2; endopeptidase/ pepti... 90 6e-15
19ref|NM_123422.2| Arabidopsis thaliana PBB2; endopeptidase/ pepti... 90 6e-15
20gb|AY114591.1| Arabidopsis thaliana 20S proteasome beta subunit ... 90 6e-15
21gb|AY093011.1| Arabidopsis thaliana 20S proteasome beta subunit ... 90 6e-15
22gb|AY087750.1| Arabidopsis thaliana clone 38185 mRNA, complete s... 90 6e-15
23gb|AF043531.1|AF043531 Arabidopsis thaliana 20S proteasome beta ... 90 6e-15
24emb|Y13177.1|ATY13177 Arabidopsis thaliana mRNA for proteasome s... 86 9e-14
25gb|BT014192.1| Lycopersicon esculentum clone 133369R, mRNA sequence 84 3e-13
26dbj|AB009052.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 80 5e-12
27emb|AJ291736.1|NTA291736 Nicotiana tabacum mRNA for putative bet... 66 8e-08
28gb|AC006067.4| Arabidopsis thaliana chromosome 2 clone T13P21 ma... 54 3e-04
29gb|AE017343.1| Cryptococcus neoformans var. neoformans JEC21 chr... 50 0.005
30ref|XM_391905.2| PREDICTED: Apis mellifera similar to CG3329-PA ... 50 0.005
31ref|XM_569684.1| Cryptococcus neoformans var. neoformans JEC21 p... 48 0.019
32gb|AY880379.1| Gekko japonicus GekBS148P mRNA, complete cds 48 0.019
33gb|BC033424.1| Mus musculus proteasome (prosome, macropain) subu... 46 0.075
34ref|NM_011187.1| Mus musculus proteasome (prosome, macropain) su... 46 0.075
35gb|BC049230.1| Mus musculus proteasome (prosome, macropain) subu... 46 0.075
36ref|NM_053532.1| Rattus norvegicus proteasome (prosome, macropai... 46 0.075
37emb|Y10874.1|MMMC14 M.musculus mRNA for proteasome subunit MC14 46 0.075
38dbj|AK168823.1| Mus musculus 16 days embryo heart cDNA, RIKEN fu... 46 0.075
39dbj|AK162002.1| Mus musculus 12 days embryo male wolffian duct i... 46 0.075
40dbj|AK013961.1| Mus musculus 13 days embryo head cDNA, RIKEN ful... 46 0.075
41dbj|AK088765.1| Mus musculus 2 days neonate thymus thymic cells ... 46 0.075
42dbj|AK088276.1| Mus musculus 2 days neonate thymus thymic cells ... 46 0.075
43dbj|AK031913.1| Mus musculus adult male medulla oblongata cDNA, ... 46 0.075
44dbj|AK002823.1| Mus musculus adult male kidney cDNA, RIKEN full-... 46 0.075
45dbj|AK012613.1| Mus musculus 11 days embryo whole body cDNA, RIK... 46 0.075
46dbj|AK075759.1| Mus musculus adult male testis cDNA, RIKEN full-... 46 0.075
47dbj|D83585.1| Mus musculus Psmb7 mRNA for proteasome Z subunit p... 46 0.075
48gb|AF285103.1|AF285103 Rattus norvegicus proteasome z subunit mR... 46 0.075
49gb|BC057662.1| Mus musculus proteasome (prosome, macropain) subu... 46 0.075
50gb|BC060551.1| Rattus norvegicus proteasome (prosome, macropain)... 46 0.075
51ref|XM_816542.1| Trypanosoma cruzi strain CL Brener proteasome b... 44 0.30
52gb|AY626811.1| Gekko japonicus BS001P (BS001) mRNA, complete cds 42 1.2
53gb|AY641847.1| Gekko japonicus GekBS026P mRNA, complete cds 42 1.2
54ref|XM_975638.1| PREDICTED: Mus musculus interferon dependent po... 42 1.2
55emb|CT025679.5| Mouse DNA sequence from clone RP24-296K22 on chr... 42 1.2
56ref|XM_744529.1| Aspergillus fumigatus Af293 proteasome componen... 42 1.2
57gb|AY283085.1| Mus musculus putative Ariadne-like ubiquitin liga... 42 1.2
58dbj|AB053120.1| Mus musculus DNA, proteasome activator genes, co... 42 1.2
59dbj|AK156320.1| Mus musculus activated spleen cDNA, RIKEN full-l... 42 1.2
60dbj|D85570.2| Mus musculus PSMB7 gene for proteasome subunit Z, ... 42 1.2
61gb|AF011889.1|AF011889 Human Xq28 cosmids U126G1, U142F2, U69B6,... 42 1.2
62ref|XM_344409.2| PREDICTED: Rattus norvegicus ring finger protei... 42 1.2
63dbj|AK214637.1| Mus musculus cDNA, clone:Y2G0132H05, strand:unsp... 42 1.2
64emb|AL844842.29| Mouse DNA sequence from clone RP23-354G20 on ch... 42 1.2
65dbj|AK131160.1| Mus musculus premature mRNA for mFLJ00217 protein 42 1.2
66gb|BC057595.1| Mus musculus ring finger protein 31, mRNA (cDNA c... 42 1.2
67gb|AY110243.1| Zea mays CL2786_1 mRNA sequence 42 1.2
68emb|CT574592.2| Pan troglodytes chromosome X clone PTB-082B15 ma... 42 1.2
69emb|CT573418.2| Pan troglodytes chromosome X clone PTB-046H01 ma... 42 1.2
70gb|AC174678.2| Mus musculus BAC clone RP23-11O22 from chromosome... 42 1.2
71ref|NM_194346.2| Mus musculus ring finger protein 31 (Rnf31), mRNA 42 1.2
72gb|AC166653.5| Mus musculus BAC clone RP24-84J23 from chromosome... 40 4.7
73gb|AC166822.3| Mus musculus BAC clone RP24-117F20 from chromosom... 40 4.7
74ref|XM_451099.1| Kluyveromyces lactis NRRL Y-1140, KLLA0A02233g ... 40 4.7
75ref|XM_548226.2| PREDICTED: Canis familiaris similar to vascular... 40 4.7
76emb|CR655048.2|CNS0F4EM Tetraodon nigroviridis full-length cDNA 40 4.7
77gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 40 4.7
78emb|AL353093.18| Human DNA sequence from clone RP11-224P11 on ch... 40 4.7
79emb|AL121997.7|HSJ1043F6 Human DNA sequence from clone RP5-1043F... 40 4.7
80emb|CR382121.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso... 40 4.7
81emb|AJ132364.1|PST132364 Pseudomonas stutzeri (strain JM300) pil... 40 4.7
82gb|AC105130.8| Homo sapiens chromosome 8, clone RP11-357L10, com... 40 4.7
83gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 40 4.7
84gb|AC090333.5| Homo sapiens chromosome 18, clone RP11-843P6, com... 40 4.7
85gb|AC009854.9| Homo sapiens chromosome 18, clone RP11-333A13, co... 40 4.7
86gb|AC009334.8| Homo sapiens chromosome 1, clone RP11-45L2, compl... 40 4.7
87ref|NM_131677.1| Danio rerio proteasome (prosome, macropain) sub... 40 4.7
88gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 4.7
89gb|BC092899.1| Danio rerio proteasome (prosome, macropain) subun... 40 4.7
90gb|AF155577.1|AF155577 Danio rerio proteasome subunit beta 12 (P... 40 4.7
91gb|BC098835.1| Rattus norvegicus proteasome (prosome, macropain)... 40 4.7
92ref|NM_001025637.1| Rattus norvegicus proteasome (prosome, macro... 40 4.7
93gb|AE008692.1| Zymomonas mobilis subsp. mobilis ZM4, complete ge... 40 4.7 
>dbj|AK103126.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033119N09, full
           insert sequence
          Length = 1195

 Score =  268 bits (135), Expect = 1e-68
 Identities = 255/295 (86%)
 Strand = Plus / Plus

                                                                       
Query: 56  ggatggccggatcgatggaactccctaccaagggcggcttcagcttcgacctgtgccgca 115
           ||||||||||| ||| ||| |||||  | |||||||| ||||||| ||||   |||   |
Sbjct: 216 ggatggccggagcgacggatctccccccgaagggcgggttcagctacgacaattgcgcga 275

                                                                       
Query: 116 ggaacgccatgctggagaagacgggccacaagatgcccgggttcaggaagaccgggacta 175
           ||||||||||||| | | ||| ||||   |||||||| ||||||   |||||||||||||
Sbjct: 276 ggaacgccatgcttgtggagaagggcttgaagatgcctgggttcctcaagaccgggacta 335

                                                                       
Query: 176 ccatcgtcggtctcgtgtttacggatggagttgttcttggggcagacacaagggcgaccg 235
           ||||||||||| | || |||  |||||| |||||||||||||||||||| ||||| ||||
Sbjct: 336 ccatcgtcggtttggtctttcaggatggtgttgttcttggggcagacacgagggccaccg 395

                                                                       
Query: 236 agggtcctatagttgctgataagaactgcgagaaaattcattttatggcaccaaacatat 295
           |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||
Sbjct: 396 agggtcctatagttgctgataagaactgcgagaaaattcattatatggcgccaaacatat 455

                                                                  
Query: 296 attgctgtggtgctggaactgctgctgacacagaggctgtgacagatatggtcag 350
           |||||||||| || |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 456 attgctgtggagcaggaactgccgctgacactgaggctgtaacagatatggtcag 510
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>dbj|AB026564.1| Oryza sativa (japonica cultivar-group) OsPBB1 mRNA for beta 2
           subunit of 20S proteasome, complete cds
          Length = 1122

 Score =  268 bits (135), Expect = 1e-68
 Identities = 255/295 (86%)
 Strand = Plus / Plus

                                                                       
Query: 56  ggatggccggatcgatggaactccctaccaagggcggcttcagcttcgacctgtgccgca 115
           ||||||||||| ||| ||| |||||  | |||||||| ||||||| ||||   |||   |
Sbjct: 109 ggatggccggagcgacggatctccccccgaagggcgggttcagctacgacaattgcgcga 168

                                                                       
Query: 116 ggaacgccatgctggagaagacgggccacaagatgcccgggttcaggaagaccgggacta 175
           ||||||||||||| | | ||| ||||   |||||||| ||||||   |||||||||||||
Sbjct: 169 ggaacgccatgcttgtggagaagggcttgaagatgcctgggttcctcaagaccgggacta 228

                                                                       
Query: 176 ccatcgtcggtctcgtgtttacggatggagttgttcttggggcagacacaagggcgaccg 235
           ||||||||||| | || |||  |||||| |||||||||||||||||||| ||||| ||||
Sbjct: 229 ccatcgtcggtttggtctttcaggatggtgttgttcttggggcagacacgagggccaccg 288

                                                                       
Query: 236 agggtcctatagttgctgataagaactgcgagaaaattcattttatggcaccaaacatat 295
           |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||
Sbjct: 289 agggtcctatagttgctgataagaactgcgagaaaattcattatatggcgccaaacatat 348

                                                                  
Query: 296 attgctgtggtgctggaactgctgctgacacagaggctgtgacagatatggtcag 350
           |||||||||| || |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 349 attgctgtggagcaggaactgccgctgacactgaggctgtaacagatatggtcag 403
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>ref|XM_476072.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 819

 Score =  264 bits (133), Expect = 2e-67
 Identities = 253/293 (86%)
 Strand = Plus / Plus

                                                                       
Query: 58  atggccggatcgatggaactccctaccaagggcggcttcagcttcgacctgtgccgcagg 117
           ||||||||| ||| ||| |||||  | |||||||| ||||||| ||||   |||   |||
Sbjct: 1   atggccggagcgacggatctccccccgaagggcgggttcagctacgacaattgcgcgagg 60

                                                                       
Query: 118 aacgccatgctggagaagacgggccacaagatgcccgggttcaggaagaccgggactacc 177
           ||||||||||| | | ||| ||||   |||||||| ||||||   |||||||||||||||
Sbjct: 61  aacgccatgcttgtggagaagggcttgaagatgcctgggttcctcaagaccgggactacc 120

                                                                       
Query: 178 atcgtcggtctcgtgtttacggatggagttgttcttggggcagacacaagggcgaccgag 237
           ||||||||| | || |||  |||||| |||||||||||||||||||| ||||| ||||||
Sbjct: 121 atcgtcggtttggtctttcaggatggtgttgttcttggggcagacacgagggccaccgag 180

                                                                       
Query: 238 ggtcctatagttgctgataagaactgcgagaaaattcattttatggcaccaaacatatat 297
           |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||
Sbjct: 181 ggtcctatagttgctgataagaactgcgagaaaattcattatatggcgccaaacatatat 240

                                                                
Query: 298 tgctgtggtgctggaactgctgctgacacagaggctgtgacagatatggtcag 350
           |||||||| || |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 241 tgctgtggagcaggaactgccgctgacactgaggctgtaacagatatggtcag 293
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>gb|BT017621.1| Zea mays clone EL01N0435E12.c mRNA sequence
          Length = 1144

 Score =  258 bits (130), Expect = 1e-65
 Identities = 241/278 (86%)
 Strand = Plus / Plus

                                                                       
Query: 70  atggaactccctaccaagggcggcttcagcttcgacctgtgccgcaggaacgccatgctg 129
           ||||| |||||  |||||||||| ||||||||||||||||||||| |||||  |||||||
Sbjct: 112 atggatctcccggccaagggcgggttcagcttcgacctgtgccgccggaacaacatgctg 171

                                                                       
Query: 130 gagaagacgggccacaagatgcccgggttcaggaagaccgggactaccatcgtcggtctc 189
           |||||||  || | |||| | || || ||||||||||||||||| ||||||||||| |||
Sbjct: 172 gagaagaacgggctcaaggtcccgggattcaggaagaccgggacaaccatcgtcggcctc 231

                                                                       
Query: 190 gtgtttacggatggagttgttcttggggcagacacaagggcgaccgagggtcctatagtt 249
           || |||  |||||| |||||||||||||||||||||||||| || ||||| || ||||||
Sbjct: 232 gtctttcaggatggggttgttcttggggcagacacaagggcaactgagggccccatagtt 291

                                                                       
Query: 250 gctgataagaactgcgagaaaattcattttatggcaccaaacatatattgctgtggtgct 309
           |||||||||||||| |||||||| || ||||||||||| || ||||| |||||||| || 
Sbjct: 292 gctgataagaactgtgagaaaatccactttatggcaccgaatatatactgctgtggagca 351

                                                 
Query: 310 ggaactgctgctgacacagaggctgtgacagatatggt 347
           ||||||||||| ||||| ||||| || |||||||||||
Sbjct: 352 ggaactgctgcggacacggaggccgttacagatatggt 389
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>gb|AY105052.1| Zea mays PCO138078 mRNA sequence
          Length = 1368

 Score =  250 bits (126), Expect = 3e-63
 Identities = 240/278 (86%)
 Strand = Plus / Plus

                                                                       
Query: 70  atggaactccctaccaagggcggcttcagcttcgacctgtgccgcaggaacgccatgctg 129
           ||||| |||||  |||||||||| ||||||||||||||||| ||| |||||  |||||||
Sbjct: 206 atggatctcccggccaagggcgggttcagcttcgacctgtgtcgccggaacaacatgctg 265

                                                                       
Query: 130 gagaagacgggccacaagatgcccgggttcaggaagaccgggactaccatcgtcggtctc 189
           |||||||  || | |||| | || || ||||||||||||||||| ||||||||||| |||
Sbjct: 266 gagaagaacggactcaaggtcccgggattcaggaagaccgggacaaccatcgtcggcctc 325

                                                                       
Query: 190 gtgtttacggatggagttgttcttggggcagacacaagggcgaccgagggtcctatagtt 249
           || |||  |||||| |||||||||||||||||||||||||| || ||||| || ||||||
Sbjct: 326 gtctttcaggatggggttgttcttggggcagacacaagggcaactgagggccccatagtt 385

                                                                       
Query: 250 gctgataagaactgcgagaaaattcattttatggcaccaaacatatattgctgtggtgct 309
           |||||||||||||| |||||||| || ||||||||||| || ||||| |||||||| || 
Sbjct: 386 gctgataagaactgtgagaaaatccactttatggcaccgaatatatactgctgtggagca 445

                                                 
Query: 310 ggaactgctgctgacacagaggctgtgacagatatggt 347
           ||||||||||| ||||| ||||| || |||||||||||
Sbjct: 446 ggaactgctgcggacacggaggccgttacagatatggt 483
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score =  204 bits (103), Expect = 1e-49
 Identities = 133/143 (93%)
 Strand = Plus / Plus

                                                                           
Query: 198     ggatggagttgttcttggggcagacacaagggcgaccgagggtcctatagttgctgataa 257
               |||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 5278640 ggatggtgttgttcttggggcagacacgagggccaccgagggtcctatagttgctgataa 5278699

                                                                           
Query: 258     gaactgcgagaaaattcattttatggcaccaaacatatattgctgtggtgctggaactgc 317
               |||||||||||||||||||| |||||| |||||||||||||||||||| || ||||||||
Sbjct: 5278700 gaactgcgagaaaattcattatatggcgccaaacatatattgctgtggagcaggaactgc 5278759

                                      
Query: 318     tgctgacacagaggctgtgacag 340
                |||||||| |||||||| ||||
Sbjct: 5278760 cgctgacactgaggctgtaacag 5278782



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 106/131 (80%)
 Strand = Plus / Plus

                                                                           
Query: 56      ggatggccggatcgatggaactccctaccaagggcggcttcagcttcgacctgtgccgca 115
               ||||||||||| ||| ||| |||||  | |||||||| ||||||| ||||   |||   |
Sbjct: 5278011 ggatggccggagcgacggatctccccccgaagggcgggttcagctacgacaattgcgcga 5278070

                                                                           
Query: 116     ggaacgccatgctggagaagacgggccacaagatgcccgggttcaggaagaccgggacta 175
               ||||||||||||| | | ||| ||||   |||||||| ||||||   |||||||||||||
Sbjct: 5278071 ggaacgccatgcttgtggagaagggcttgaagatgcctgggttcctcaagaccgggacta 5278130

                          
Query: 176     ccatcgtcggt 186
               |||||||||||
Sbjct: 5278131 ccatcgtcggt 5278141
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>gb|AC093954.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1097_A12,
             complete sequence
          Length = 88725

 Score =  204 bits (103), Expect = 1e-49
 Identities = 133/143 (93%)
 Strand = Plus / Plus

                                                                         
Query: 198   ggatggagttgttcttggggcagacacaagggcgaccgagggtcctatagttgctgataa 257
             |||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 15341 ggatggtgttgttcttggggcagacacgagggccaccgagggtcctatagttgctgataa 15400

                                                                         
Query: 258   gaactgcgagaaaattcattttatggcaccaaacatatattgctgtggtgctggaactgc 317
             |||||||||||||||||||| |||||| |||||||||||||||||||| || ||||||||
Sbjct: 15401 gaactgcgagaaaattcattatatggcgccaaacatatattgctgtggagcaggaactgc 15460

                                    
Query: 318   tgctgacacagaggctgtgacag 340
              |||||||| |||||||| ||||
Sbjct: 15461 cgctgacactgaggctgtaacag 15483



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 106/131 (80%)
 Strand = Plus / Plus

                                                                         
Query: 56    ggatggccggatcgatggaactccctaccaagggcggcttcagcttcgacctgtgccgca 115
             ||||||||||| ||| ||| |||||  | |||||||| ||||||| ||||   |||   |
Sbjct: 14712 ggatggccggagcgacggatctccccccgaagggcgggttcagctacgacaattgcgcga 14771

                                                                         
Query: 116   ggaacgccatgctggagaagacgggccacaagatgcccgggttcaggaagaccgggacta 175
             ||||||||||||| | | ||| ||||   |||||||| ||||||   |||||||||||||
Sbjct: 14772 ggaacgccatgcttgtggagaagggcttgaagatgcctgggttcctcaagaccgggacta 14831

                        
Query: 176   ccatcgtcggt 186
             |||||||||||
Sbjct: 14832 ccatcgtcggt 14842
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>ref|NM_180310.1| Arabidopsis thaliana PBB1; endopeptidase/ peptidase/ threonine
           endopeptidase AT3G27430 (PBB1) transcript variant
           AT3G27430.1 mRNA, complete cds
          Length = 1228

 Score =  113 bits (57), Expect = 4e-22
 Identities = 93/105 (88%)
 Strand = Plus / Plus

                                                                       
Query: 247 gttgctgataagaactgcgagaaaattcattttatggcaccaaacatatattgctgtggt 306
           ||||||||||||||||| ||||| ||||| | ||||||||||||||||||||||||||||
Sbjct: 311 gttgctgataagaactgtgagaagattcactatatggcaccaaacatatattgctgtggt 370

                                                        
Query: 307 gctggaactgctgctgacacagaggctgtgacagatatggtcagc 351
           || |||||||| ||||| || || || || || ||||||||||||
Sbjct: 371 gcaggaactgcggctgatactgaagcagtcactgatatggtcagc 415
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>ref|NM_113658.2| Arabidopsis thaliana PBB1; endopeptidase/ peptidase/ threonine
           endopeptidase AT3G27430 (PBB1) transcript variant
           AT3G27430.2 mRNA, complete cds
          Length = 1230

 Score =  113 bits (57), Expect = 4e-22
 Identities = 93/105 (88%)
 Strand = Plus / Plus

                                                                       
Query: 247 gttgctgataagaactgcgagaaaattcattttatggcaccaaacatatattgctgtggt 306
           ||||||||||||||||| ||||| ||||| | ||||||||||||||||||||||||||||
Sbjct: 311 gttgctgataagaactgtgagaagattcactatatggcaccaaacatatattgctgtggt 370

                                                        
Query: 307 gctggaactgctgctgacacagaggctgtgacagatatggtcagc 351
           || |||||||| ||||| || || || || || ||||||||||||
Sbjct: 371 gcaggaactgcggctgatactgaagcagtcactgatatggtcagc 415
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>emb|Y13178.1|ATY13178 Arabidopsis thaliana mRNA for proteasome subunit prcfa
          Length = 1068

 Score =  113 bits (57), Expect = 4e-22
 Identities = 93/105 (88%)
 Strand = Plus / Plus

                                                                       
Query: 247 gttgctgataagaactgcgagaaaattcattttatggcaccaaacatatattgctgtggt 306
           ||||||||||||||||| ||||| ||||| | ||||||||||||||||||||||||||||
Sbjct: 213 gttgctgataagaactgtgagaagattcactatatggcaccaaacatatattgctgtggt 272

                                                        
Query: 307 gctggaactgctgctgacacagaggctgtgacagatatggtcagc 351
           || |||||||| ||||| || || || || || ||||||||||||
Sbjct: 273 gcaggaactgcggctgatactgaagcagtcactgatatggtcagc 317
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>gb|BT006306.1| Arabidopsis thaliana At3g27430 mRNA, complete cds
          Length = 822

 Score =  113 bits (57), Expect = 4e-22
 Identities = 93/105 (88%)
 Strand = Plus / Plus

                                                                       
Query: 247 gttgctgataagaactgcgagaaaattcattttatggcaccaaacatatattgctgtggt 306
           ||||||||||||||||| ||||| ||||| | ||||||||||||||||||||||||||||
Sbjct: 193 gttgctgataagaactgtgagaagattcactatatggcaccaaacatatattgctgtggt 252

                                                        
Query: 307 gctggaactgctgctgacacagaggctgtgacagatatggtcagc 351
           || |||||||| ||||| || || || || || ||||||||||||
Sbjct: 253 gcaggaactgcggctgatactgaagcagtcactgatatggtcagc 297
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>gb|BT003339.1| Arabidopsis thaliana 20S proteasome beta subunit (PBB1) (At3g27430)
           mRNA, complete cds
          Length = 1067

 Score =  113 bits (57), Expect = 4e-22
 Identities = 93/105 (88%)
 Strand = Plus / Plus

                                                                       
Query: 247 gttgctgataagaactgcgagaaaattcattttatggcaccaaacatatattgctgtggt 306
           ||||||||||||||||| ||||| ||||| | ||||||||||||||||||||||||||||
Sbjct: 311 gttgctgataagaactgtgagaagattcactatatggcaccaaacatatattgctgtggt 370

                                                        
Query: 307 gctggaactgctgctgacacagaggctgtgacagatatggtcagc 351
           || |||||||| ||||| || || || || || ||||||||||||
Sbjct: 371 gcaggaactgcggctgatactgaagcagtcactgatatggtcagc 415
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>gb|AY086464.1| Arabidopsis thaliana clone 25264 mRNA, complete sequence
          Length = 1120

 Score =  113 bits (57), Expect = 4e-22
 Identities = 93/105 (88%)
 Strand = Plus / Plus

                                                                       
Query: 247 gttgctgataagaactgcgagaaaattcattttatggcaccaaacatatattgctgtggt 306
           ||||||||||||||||| ||||| ||||| | ||||||||||||||||||||||||||||
Sbjct: 286 gttgctgataagaactgtgagaagattcactatatggcaccaaacatatattgctgtggt 345

                                                        
Query: 307 gctggaactgctgctgacacagaggctgtgacagatatggtcagc 351
           || |||||||| ||||| || || || || || ||||||||||||
Sbjct: 346 gcaggaactgcggctgatactgaagcagtcactgatatggtcagc 390
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>gb|AF043530.1|AF043530 Arabidopsis thaliana 20S proteasome beta subunit PBB1 (PBB1) mRNA,
           complete cds
          Length = 1068

 Score =  113 bits (57), Expect = 4e-22
 Identities = 93/105 (88%)
 Strand = Plus / Plus

                                                                       
Query: 247 gttgctgataagaactgcgagaaaattcattttatggcaccaaacatatattgctgtggt 306
           ||||||||||||||||| ||||| ||||| | ||||||||||||||||||||||||||||
Sbjct: 213 gttgctgataagaactgtgagaagattcactatatggcaccaaacatatattgctgtggt 272

                                                        
Query: 307 gctggaactgctgctgacacagaggctgtgacagatatggtcagc 351
           || |||||||| ||||| || || || || || ||||||||||||
Sbjct: 273 gcaggaactgcggctgatactgaagcagtcactgatatggtcagc 317
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>dbj|AB024028.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K1G2
          Length = 70952

 Score =  105 bits (53), Expect = 9e-20
 Identities = 71/77 (92%)
 Strand = Plus / Plus

                                                                         
Query: 247   gttgctgataagaactgcgagaaaattcattttatggcaccaaacatatattgctgtggt 306
             ||||||||||||||||| ||||| ||||| | ||||||||||||||||||||||||||||
Sbjct: 53864 gttgctgataagaactgtgagaagattcactatatggcaccaaacatatattgctgtggt 53923

                              
Query: 307   gctggaactgctgctga 323
             || |||||||| |||||
Sbjct: 53924 gcaggaactgcggctga 53940
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>gb|AC150800.3| Medicago truncatula chromosome 7 BAC clone mth2-77m9, complete sequence
          Length = 116865

 Score =  103 bits (52), Expect = 4e-19
 Identities = 70/76 (92%)
 Strand = Plus / Minus

                                                                          
Query: 265    gagaaaattcattttatggcaccaaacatatattgctgtggtgctggaactgctgctgac 324
              ||||||||||||| ||||||||||||||||||||||||||| || || ||||||||||| 
Sbjct: 108108 gagaaaattcattatatggcaccaaacatatattgctgtggagcaggcactgctgctgat 108049

                              
Query: 325    acagaggctgtgacag 340
              ||||||||||| ||||
Sbjct: 108048 acagaggctgtaacag 108033
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>dbj|AK058440.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-F11, full
           insert sequence
          Length = 750

 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 70/77 (90%)
 Strand = Plus / Plus

                                                                       
Query: 274 cattttatggcaccaaacatatattgctgtggtgctggaactgctgctgacacagaggct 333
           |||| |||||| |||||||||||||||||||| || |||||||| |||||||| ||||||
Sbjct: 1   cattatatggcgccaaacatatattgctgtggagcaggaactgccgctgacactgaggct 60

                            
Query: 334 gtgacagatatggtcag 350
           || ||||||||||||||
Sbjct: 61  gtaacagatatggtcag 77
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>ref|NM_180777.1| Arabidopsis thaliana PBB2; endopeptidase/ peptidase/ threonine
           endopeptidase AT5G40580 (PBB2) transcript variant
           AT5G40580.1 mRNA, complete cds
          Length = 1176

 Score = 89.7 bits (45), Expect = 6e-15
 Identities = 117/141 (82%)
 Strand = Plus / Plus

                                                                       
Query: 211 cttggggcagacacaagggcgaccgagggtcctatagttgctgataagaactgcgagaaa 270
           |||||||| || ||| |||| || || || ||||| || |||||||||||||| ||||| 
Sbjct: 306 cttggggctgatacacgggcaactgaagggcctattgtggctgataagaactgtgagaag 365

                                                                       
Query: 271 attcattttatggcaccaaacatatattgctgtggtgctggaactgctgctgacacagag 330
           ||||| |  |||||||||||||| || || |||||||| ||||| ||||||||||| || 
Sbjct: 366 attcactacatggcaccaaacatttactgttgtggtgcaggaaccgctgctgacactgaa 425

                                
Query: 331 gctgtgacagatatggtcagc 351
           || || || ||||||||||||
Sbjct: 426 gcagtaactgatatggtcagc 446
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>ref|NM_123422.2| Arabidopsis thaliana PBB2; endopeptidase/ peptidase/ threonine
           endopeptidase AT5G40580 (PBB2) transcript variant
           AT5G40580.2 mRNA, complete cds
          Length = 1106

 Score = 89.7 bits (45), Expect = 6e-15
 Identities = 117/141 (82%)
 Strand = Plus / Plus

                                                                       
Query: 211 cttggggcagacacaagggcgaccgagggtcctatagttgctgataagaactgcgagaaa 270
           |||||||| || ||| |||| || || || ||||| || |||||||||||||| ||||| 
Sbjct: 236 cttggggctgatacacgggcaactgaagggcctattgtggctgataagaactgtgagaag 295

                                                                       
Query: 271 attcattttatggcaccaaacatatattgctgtggtgctggaactgctgctgacacagag 330
           ||||| |  |||||||||||||| || || |||||||| ||||| ||||||||||| || 
Sbjct: 296 attcactacatggcaccaaacatttactgttgtggtgcaggaaccgctgctgacactgaa 355

                                
Query: 331 gctgtgacagatatggtcagc 351
           || || || ||||||||||||
Sbjct: 356 gcagtaactgatatggtcagc 376
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>gb|AY114591.1| Arabidopsis thaliana 20S proteasome beta subunit PBB2 (At5g40580)
           mRNA, complete cds
          Length = 957

 Score = 89.7 bits (45), Expect = 6e-15
 Identities = 117/141 (82%)
 Strand = Plus / Plus

                                                                       
Query: 211 cttggggcagacacaagggcgaccgagggtcctatagttgctgataagaactgcgagaaa 270
           |||||||| || ||| |||| || || || ||||| || |||||||||||||| ||||| 
Sbjct: 157 cttggggctgatacacgggcaactgaagggcctattgtggctgataagaactgtgagaag 216

                                                                       
Query: 271 attcattttatggcaccaaacatatattgctgtggtgctggaactgctgctgacacagag 330
           ||||| |  |||||||||||||| || || |||||||| ||||| ||||||||||| || 
Sbjct: 217 attcactacatggcaccaaacatttactgttgtggtgcaggaaccgctgctgacactgaa 276

                                
Query: 331 gctgtgacagatatggtcagc 351
           || || || ||||||||||||
Sbjct: 277 gcagtaactgatatggtcagc 297
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>gb|AY093011.1| Arabidopsis thaliana 20S proteasome beta subunit PBB2 (At5g40580)
           mRNA, complete cds
          Length = 1105

 Score = 89.7 bits (45), Expect = 6e-15
 Identities = 117/141 (82%)
 Strand = Plus / Plus

                                                                       
Query: 211 cttggggcagacacaagggcgaccgagggtcctatagttgctgataagaactgcgagaaa 270
           |||||||| || ||| |||| || || || ||||| || |||||||||||||| ||||| 
Sbjct: 236 cttggggctgatacacgggcaactgaagggcctattgtggctgataagaactgtgagaag 295

                                                                       
Query: 271 attcattttatggcaccaaacatatattgctgtggtgctggaactgctgctgacacagag 330
           ||||| |  |||||||||||||| || || |||||||| ||||| ||||||||||| || 
Sbjct: 296 attcactacatggcaccaaacatttactgttgtggtgcaggaaccgctgctgacactgaa 355

                                
Query: 331 gctgtgacagatatggtcagc 351
           || || || ||||||||||||
Sbjct: 356 gcagtaactgatatggtcagc 376
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>gb|AY087750.1| Arabidopsis thaliana clone 38185 mRNA, complete sequence
          Length = 1176

 Score = 89.7 bits (45), Expect = 6e-15
 Identities = 117/141 (82%)
 Strand = Plus / Plus

                                                                       
Query: 211 cttggggcagacacaagggcgaccgagggtcctatagttgctgataagaactgcgagaaa 270
           |||||||| || ||| |||| || || || ||||| || |||||||||||||| ||||| 
Sbjct: 306 cttggggctgatacacgggcaactgaagggcctattgtggctgataagaactgtgagaag 365

                                                                       
Query: 271 attcattttatggcaccaaacatatattgctgtggtgctggaactgctgctgacacagag 330
           ||||| |  |||||||||||||| || || |||||||| ||||| ||||||||||| || 
Sbjct: 366 attcactacatggcaccaaacatttactgttgtggtgcaggaaccgctgctgacactgaa 425

                                
Query: 331 gctgtgacagatatggtcagc 351
           || || || ||||||||||||
Sbjct: 426 gcagtaactgatatggtcagc 446
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>gb|AF043531.1|AF043531 Arabidopsis thaliana 20S proteasome beta subunit PBB2 (PBB2) mRNA,
           complete cds
          Length = 1085

 Score = 89.7 bits (45), Expect = 6e-15
 Identities = 117/141 (82%)
 Strand = Plus / Plus

                                                                       
Query: 211 cttggggcagacacaagggcgaccgagggtcctatagttgctgataagaactgcgagaaa 270
           |||||||| || ||| |||| || || || ||||| || |||||||||||||| ||||| 
Sbjct: 197 cttggggctgatacacgggcaactgaagggcctattgtggctgataagaactgtgagaag 256

                                                                       
Query: 271 attcattttatggcaccaaacatatattgctgtggtgctggaactgctgctgacacagag 330
           ||||| |  |||||||||||||| || || |||||||| ||||| ||||||||||| || 
Sbjct: 257 attcactacatggcaccaaacatttactgttgtggtgcaggaaccgctgctgacactgaa 316

                                
Query: 331 gctgtgacagatatggtcagc 351
           || || || ||||||||||||
Sbjct: 317 gcagtaactgatatggtcagc 337
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>emb|Y13177.1|ATY13177 Arabidopsis thaliana mRNA for proteasome subunit prcfc
          Length = 866

 Score = 85.7 bits (43), Expect = 9e-14
 Identities = 94/111 (84%)
 Strand = Plus / Plus

                                                                       
Query: 241 cctatagttgctgataagaactgcgagaaaattcattttatggcaccaaacatatattgc 300
           ||||| || |||||||||||||| ||||| ||||| |  |||||||||||||| || || 
Sbjct: 19  cctattgtggctgataagaactgtgagaagattcactacatggcaccaaacatttactgt 78

                                                              
Query: 301 tgtggtgctggaactgctgctgacacagaggctgtgacagatatggtcagc 351
           |||||||| ||||| ||||||||||| || || || || ||||||||||||
Sbjct: 79  tgtggtgcaggaaccgctgctgacactgaagcagtaactgatatggtcagc 129
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>gb|BT014192.1| Lycopersicon esculentum clone 133369R, mRNA sequence
          Length = 1214

 Score = 83.8 bits (42), Expect = 3e-13
 Identities = 117/142 (82%)
 Strand = Plus / Plus

                                                                       
Query: 209 ttcttggggcagacacaagggcgaccgagggtcctatagttgctgataagaactgcgaga 268
           ||||||| ||||||||| | || || || || || || ||||||||||||||||| ||||
Sbjct: 256 ttcttggagcagacacacgagccactgaaggaccgattgttgctgataagaactgtgaga 315

                                                                       
Query: 269 aaattcattttatggcaccaaacatatattgctgtggtgctggaactgctgctgacacag 328
           | |||||||  ||||| |  ||||||||||||||||| || ||||| |||||||| || |
Sbjct: 316 agattcattacatggcccataacatatattgctgtggagcaggaacagctgctgatactg 375

                                 
Query: 329 aggctgtgacagatatggtcag 350
           |||| || || || ||||||||
Sbjct: 376 aggcagtaactgacatggtcag 397
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>dbj|AB009052.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MNF13
          Length = 85992

 Score = 79.8 bits (40), Expect = 5e-12
 Identities = 97/116 (83%)
 Strand = Plus / Minus

                                                                         
Query: 211   cttggggcagacacaagggcgaccgagggtcctatagttgctgataagaactgcgagaaa 270
             |||||||| || ||| |||| || || || ||||| || |||||||||||||| ||||| 
Sbjct: 24628 cttggggctgatacacgggcaactgaagggcctattgtggctgataagaactgtgagaag 24569

                                                                     
Query: 271   attcattttatggcaccaaacatatattgctgtggtgctggaactgctgctgacac 326
             ||||| |  |||||||||||||| || || |||||||| ||||| |||||||||||
Sbjct: 24568 attcactacatggcaccaaacatttactgttgtggtgcaggaaccgctgctgacac 24513
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>emb|AJ291736.1|NTA291736 Nicotiana tabacum mRNA for putative beta proteasome subunit (b2
           gene)
          Length = 870

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 123/153 (80%)
 Strand = Plus / Plus

                                                                       
Query: 198 ggatggagttgttcttggggcagacacaagggcgaccgagggtcctatagttgctgataa 257
           |||||| ||| | ||||| || |||||| |||| || || || || || ||||| |||||
Sbjct: 195 ggatggtgttatccttggagccgacacacgggcaactgaagggccaattgttgccgataa 254

                                                                       
Query: 258 gaactgcgagaaaattcattttatggcaccaaacatatattgctgtggtgctggaactgc 317
            ||||| |||||||||||||  ||||| || || ||||||||||| || ||||| || ||
Sbjct: 255 aaactgtgagaaaattcattacatggctcctaatatatattgctgcggagctgggacagc 314

                                            
Query: 318 tgctgacacagaggctgtgacagatatggtcag 350
           ||| || |||||||| || || || ||||||||
Sbjct: 315 tgcggatacagaggcggttactgacatggtcag 347
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>gb|AC006067.4| Arabidopsis thaliana chromosome 2 clone T13P21 map mi398, complete
             sequence
          Length = 126337

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 69/83 (83%)
 Strand = Plus / Plus

                                                                         
Query: 211   cttggggcagacacaagggcgaccgagggtcctatagttgctgataagaactgcgagaaa 270
             |||||||| || ||| |||| || || || ||||| ||||||||||||||||| | ||| 
Sbjct: 73800 cttggggctgatacacgggcaactgaagggcctattgttgctgataagaactgtgggaag 73859

                                    
Query: 271   attcattttatggcaccaaacat 293
             ||||| |  ||||||||||||||
Sbjct: 73860 attcactacatggcaccaaacat 73882
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>gb|AE017343.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 3, complete
               sequence
          Length = 2105742

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                                
Query: 298     tgctgtggtgctggaactgctgctgacacagag 330
               |||||||||||||| |||||||| |||||||||
Sbjct: 1118893 tgctgtggtgctggtactgctgccgacacagag 1118861
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>ref|XM_391905.2| PREDICTED: Apis mellifera similar to CG3329-PA (LOC408353), mRNA
          Length = 1474

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 295 tattgctgtggtgctggaactgctgctga 323
           ||||| |||||||||||||||||||||||
Sbjct: 285 tattgttgtggtgctggaactgctgctga 313
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>ref|XM_569684.1| Cryptococcus neoformans var. neoformans JEC21 proteasome subunit,
           beta type, 7 (CNC03530) partial mRNA
          Length = 1067

 Score = 48.1 bits (24), Expect = 0.019
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 298 tgctgtggtgctggaactgctgctgacacaga 329
           |||||||||||||| |||||||| ||||||||
Sbjct: 279 tgctgtggtgctggtactgctgccgacacaga 310
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>gb|AY880379.1| Gekko japonicus GekBS148P mRNA, complete cds
          Length = 1144

 Score = 48.1 bits (24), Expect = 0.019
 Identities = 66/80 (82%)
 Strand = Plus / Plus

                                                                       
Query: 247 gttgctgataagaactgcgagaaaattcattttatggcaccaaacatatattgctgtggt 306
           |||||||||||||||||    ||||| || |||||  | |||||||| ||||| ||||| 
Sbjct: 367 gttgctgataagaactgttcaaaaatccactttatctctccaaacatctattgttgtgga 426

                               
Query: 307 gctggaactgctgctgacac 326
           ||||| |||||||| |||||
Sbjct: 427 gctgggactgctgcagacac 446
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>gb|BC033424.1| Mus musculus proteasome (prosome, macropain) subunit, beta type 7,
           mRNA (cDNA clone IMAGE:5360819), partial cds
          Length = 960

 Score = 46.1 bits (23), Expect = 0.075
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 295 tattgctgtggtgctggaactgctgctgacacaga 329
           ||||||||||||||||| || ||||| ||||||||
Sbjct: 254 tattgctgtggtgctgggacagctgcagacacaga 288
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>ref|NM_011187.1| Mus musculus proteasome (prosome, macropain) subunit, beta type 7
           (Psmb7), mRNA
          Length = 969

 Score = 46.1 bits (23), Expect = 0.075
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 295 tattgctgtggtgctggaactgctgctgacacaga 329
           ||||||||||||||||| || ||||| ||||||||
Sbjct: 257 tattgctgtggtgctgggacagctgcagacacaga 291
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>gb|BC049230.1| Mus musculus proteasome (prosome, macropain) subunit, beta type 7,
           mRNA (cDNA clone IMAGE:3967580), partial cds
          Length = 986

 Score = 46.1 bits (23), Expect = 0.075
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 295 tattgctgtggtgctggaactgctgctgacacaga 329
           ||||||||||||||||| || ||||| ||||||||
Sbjct: 250 tattgctgtggtgctgggacagctgcagacacaga 284
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>ref|NM_053532.1| Rattus norvegicus proteasome (prosome, macropain) subunit, beta
           type 7 (Psmb7), mRNA
          Length = 993

 Score = 46.1 bits (23), Expect = 0.075
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 295 tattgctgtggtgctggaactgctgctgacacaga 329
           ||||||||||||||||| || ||||| ||||||||
Sbjct: 260 tattgctgtggtgctgggacagctgcagacacaga 294
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>emb|Y10874.1|MMMC14 M.musculus mRNA for proteasome subunit MC14
          Length = 975

 Score = 46.1 bits (23), Expect = 0.075
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 295 tattgctgtggtgctggaactgctgctgacacaga 329
           ||||||||||||||||| || ||||| ||||||||
Sbjct: 271 tattgctgtggtgctgggacagctgcagacacaga 305
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>dbj|AK168823.1| Mus musculus 16 days embryo heart cDNA, RIKEN full-length enriched
           library, clone:I920058A21 product:proteasome (prosome,
           macropain) subunit, beta type 7, full insert sequence
          Length = 947

 Score = 46.1 bits (23), Expect = 0.075
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 295 tattgctgtggtgctggaactgctgctgacacaga 329
           ||||||||||||||||| || ||||| ||||||||
Sbjct: 260 tattgctgtggtgctgggacagctgcagacacaga 294
to top
>dbj|AK162002.1| Mus musculus 12 days embryo male wolffian duct includes surrounding
           region cDNA, RIKEN full-length enriched library,
           clone:6720446N17 product:proteasome (prosome, macropain)
           subunit, beta type 7, full insert sequence
          Length = 2854

 Score = 46.1 bits (23), Expect = 0.075
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 295 tattgctgtggtgctggaactgctgctgacacaga 329
           ||||||||||||||||| || ||||| ||||||||
Sbjct: 276 tattgctgtggtgctgggacagctgcagacacaga 310
to top
>dbj|AK013961.1| Mus musculus 13 days embryo head cDNA, RIKEN full-length enriched
           library, clone:3110001M09 product:proteasome (prosome,
           macropain) subunit, beta type 7, full insert sequence
          Length = 972

 Score = 46.1 bits (23), Expect = 0.075
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 295 tattgctgtggtgctggaactgctgctgacacaga 329
           ||||||||||||||||| || ||||| ||||||||
Sbjct: 268 tattgctgtggtgctgggacagctgcagacacaga 302
to top
>dbj|AK088765.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN
           full-length enriched library, clone:E430025I23
           product:proteasome (prosome, macropain) subunit, beta
           type 7, full insert sequence
          Length = 993

 Score = 46.1 bits (23), Expect = 0.075
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 295 tattgctgtggtgctggaactgctgctgacacaga 329
           ||||||||||||||||| || ||||| ||||||||
Sbjct: 271 tattgctgtggtgctgggacagctgcagacacaga 305
to top
>dbj|AK088276.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN
           full-length enriched library, clone:E430009J22
           product:proteasome (prosome, macropain) subunit, beta
           type 7, full insert sequence
          Length = 988

 Score = 46.1 bits (23), Expect = 0.075
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 295 tattgctgtggtgctggaactgctgctgacacaga 329
           ||||||||||||||||| || ||||| ||||||||
Sbjct: 268 tattgctgtggtgctgggacagctgcagacacaga 302
to top
>dbj|AK031913.1| Mus musculus adult male medulla oblongata cDNA, RIKEN full-length
           enriched library, clone:6330443K10 product:proteasome
           (prosome, macropain) subunit, beta type 7, full insert
           sequence
          Length = 985

 Score = 46.1 bits (23), Expect = 0.075
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 295 tattgctgtggtgctggaactgctgctgacacaga 329
           ||||||||||||||||| || ||||| ||||||||
Sbjct: 273 tattgctgtggtgctgggacagctgcagacacaga 307
to top
>dbj|AK002823.1| Mus musculus adult male kidney cDNA, RIKEN full-length enriched
           library, clone:0610039B05 product:proteasome (prosome,
           macropain) subunit, beta type 7, full insert sequence
          Length = 971

 Score = 46.1 bits (23), Expect = 0.075
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 295 tattgctgtggtgctggaactgctgctgacacaga 329
           ||||||||||||||||| || ||||| ||||||||
Sbjct: 272 tattgctgtggtgctgggacagctgcagacacaga 306
to top
>dbj|AK012613.1| Mus musculus 11 days embryo whole body cDNA, RIKEN full-length
           enriched library, clone:2700095J12 product:proteasome
           (prosome, macropain) subunit, beta type 7, full insert
           sequence
          Length = 969

 Score = 46.1 bits (23), Expect = 0.075
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 295 tattgctgtggtgctggaactgctgctgacacaga 329
           ||||||||||||||||| || ||||| ||||||||
Sbjct: 258 tattgctgtggtgctgggacagctgcagacacaga 292
to top
>dbj|AK075759.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:1700028C04 product:proteasome (prosome,
           macropain) subunit, beta type 7, full insert sequence
          Length = 985

 Score = 46.1 bits (23), Expect = 0.075
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 295 tattgctgtggtgctggaactgctgctgacacaga 329
           ||||||||||||||||| || ||||| ||||||||
Sbjct: 273 tattgctgtggtgctgggacagctgcagacacaga 307
to top
>dbj|D83585.1| Mus musculus Psmb7 mRNA for proteasome Z subunit precursor,
           complete cds
          Length = 969

 Score = 46.1 bits (23), Expect = 0.075
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 295 tattgctgtggtgctggaactgctgctgacacaga 329
           ||||||||||||||||| || ||||| ||||||||
Sbjct: 257 tattgctgtggtgctgggacagctgcagacacaga 291
to top
>gb|AF285103.1|AF285103 Rattus norvegicus proteasome z subunit mRNA, complete cds
          Length = 993

 Score = 46.1 bits (23), Expect = 0.075
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 295 tattgctgtggtgctggaactgctgctgacacaga 329
           ||||||||||||||||| || ||||| ||||||||
Sbjct: 260 tattgctgtggtgctgggacagctgcagacacaga 294
to top
>gb|BC057662.1| Mus musculus proteasome (prosome, macropain) subunit, beta type 7,
           mRNA (cDNA clone MGC:68156 IMAGE:2865594), complete cds
          Length = 995

 Score = 46.1 bits (23), Expect = 0.075
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 295 tattgctgtggtgctggaactgctgctgacacaga 329
           ||||||||||||||||| || ||||| ||||||||
Sbjct: 258 tattgctgtggtgctgggacagctgcagacacaga 292
to top
>gb|BC060551.1| Rattus norvegicus proteasome (prosome, macropain) subunit, beta
           type 7, mRNA (cDNA clone MGC:72743 IMAGE:6922407),
           complete cds
          Length = 1002

 Score = 46.1 bits (23), Expect = 0.075
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 295 tattgctgtggtgctggaactgctgctgacacaga 329
           ||||||||||||||||| || ||||| ||||||||
Sbjct: 270 tattgctgtggtgctgggacagctgcagacacaga 304
to top
>ref|XM_816542.1| Trypanosoma cruzi strain CL Brener proteasome beta 2 subunit
           (Tc00.1047053508461.430) partial mRNA
          Length = 909

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                     
Query: 298 tgctgtggtgctggaactgctgctgacacagaggctgtgaca 339
           ||||||||||| ||||| || ||||| || ||||||||||||
Sbjct: 355 tgctgtggtgcaggaacggcggctgatacggaggctgtgaca 396
to top
>gb|AY626811.1| Gekko japonicus BS001P (BS001) mRNA, complete cds
          Length = 1014

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 289 aacatatattgctgtggtgctggaactgctgctgacacaga 329
           ||||| ||||| ||||||||||| || ||||| ||||||||
Sbjct: 272 aacatttattgttgtggtgctgggacagctgcggacacaga 312
to top
>gb|AY641847.1| Gekko japonicus GekBS026P mRNA, complete cds
          Length = 926

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 289 aacatatattgctgtggtgctggaactgctgctgacacaga 329
           ||||| ||||| ||||||||||| || ||||| ||||||||
Sbjct: 210 aacatttattgttgtggtgctgggacagctgcggacacaga 250
to top
>ref|XM_975638.1| PREDICTED: Mus musculus interferon dependent positive acting
           transcription factor 3 gamma (Isgf3g), mRNA
          Length = 1408

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 303 tggtgctggaactgctgctga 323
           |||||||||||||||||||||
Sbjct: 78  tggtgctggaactgctgctga 58
to top
>emb|CT025679.5| Mouse DNA sequence from clone RP24-296K22 on chromosome 14, complete
             sequence
          Length = 160805

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 303   tggtgctggaactgctgctga 323
             |||||||||||||||||||||
Sbjct: 37444 tggtgctggaactgctgctga 37424
to top
>ref|XM_744529.1| Aspergillus fumigatus Af293 proteasome component Pup1 (Afu2g04910)
           partial mRNA
          Length = 819

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 238 ggtcctatagttgctgataagaactgcgagaaa 270
           ||||||||||| || || |||||||||||||||
Sbjct: 154 ggtcctatagtcgcagacaagaactgcgagaaa 186
to top
>gb|AY283085.1| Mus musculus putative Ariadne-like ubiquitin ligase PAUL mRNA,
            complete cds
          Length = 3282

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 303  tggtgctggaactgctgctga 323
            |||||||||||||||||||||
Sbjct: 3267 tggtgctggaactgctgctga 3247
to top
>dbj|AB053120.1| Mus musculus DNA, proteasome activator genes, complete cds
          Length = 34849

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 303   tggtgctggaactgctgctga 323
             |||||||||||||||||||||
Sbjct: 31684 tggtgctggaactgctgctga 31664
to top
>dbj|AK156320.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
            library, clone:F830016G16 product:ring finger protein 31,
            full insert sequence
          Length = 3466

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 303  tggtgctggaactgctgctga 323
            |||||||||||||||||||||
Sbjct: 3441 tggtgctggaactgctgctga 3421
to top
>dbj|D85570.2| Mus musculus PSMB7 gene for proteasome subunit Z, complete cds
          Length = 3847

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                             
Query: 297  ttgctgtggtgctggaactgctgctgacacaga 329
            ||||||||||||||| || ||||| ||||||||
Sbjct: 1879 ttgctgtggtgctgggacagctgcagacacaga 1911
to top
>gb|AF011889.1|AF011889 Human Xq28 cosmids U126G1, U142F2, U69B6, U145C10, U169A5, U84H1,
             U24D12, U80A7, U153E6, L35485, and R7-163A8 containing
             iduronate 2-sulfatase gene and pseudogene, complete
             sequence
          Length = 326663

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 43    gagatcagccgcaggatggcc 63
             |||||||||||||||||||||
Sbjct: 78362 gagatcagccgcaggatggcc 78342
to top
>ref|XM_344409.2| PREDICTED: Rattus norvegicus ring finger protein 31 (predicted)
            (Rnf31_predicted), mRNA
          Length = 3437

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 303  tggtgctggaactgctgctga 323
            |||||||||||||||||||||
Sbjct: 3421 tggtgctggaactgctgctga 3401
to top
>dbj|AK214637.1| Mus musculus cDNA, clone:Y2G0132H05, strand:unspecified
          Length = 85

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 303 tggtgctggaactgctgctga 323
           |||||||||||||||||||||
Sbjct: 34  tggtgctggaactgctgctga 54
to top
>emb|AL844842.29| Mouse DNA sequence from clone RP23-354G20 on chromosome 2, complete
             sequence
          Length = 228433

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 297   ttgctgtggtgctggaactgctgctgacacaga 329
             ||||||||||||||| || ||||| ||||||||
Sbjct: 47819 ttgctgtggtgctgggacagctgcagacacaga 47787
to top
>dbj|AK131160.1| Mus musculus premature mRNA for mFLJ00217 protein
          Length = 4939

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 303  tggtgctggaactgctgctga 323
            |||||||||||||||||||||
Sbjct: 4917 tggtgctggaactgctgctga 4897
to top
>gb|BC057595.1| Mus musculus ring finger protein 31, mRNA (cDNA clone MGC:67171
            IMAGE:6811051), complete cds
          Length = 3443

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 303  tggtgctggaactgctgctga 323
            |||||||||||||||||||||
Sbjct: 3358 tggtgctggaactgctgctga 3338
to top
>gb|AY110243.1| Zea mays CL2786_1 mRNA sequence
          Length = 1029

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 34/37 (91%), Gaps = 1/37 (2%)
 Strand = Plus / Minus

                                                
Query: 315 tgctgctgacacagaggctgtgacagatatggtcagc 351
           |||||||||||| |||||||| ||||| |||||||||
Sbjct: 975 tgctgctgacactgaggctgt-acagacatggtcagc 940
to top
>emb|CT574592.2| Pan troglodytes chromosome X clone PTB-082B15 map Xq28, complete
             sequence
          Length = 228540

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 43    gagatcagccgcaggatggcc 63
             |||||||||||||||||||||
Sbjct: 38105 gagatcagccgcaggatggcc 38085
to top
>emb|CT573418.2| Pan troglodytes chromosome X clone PTB-046H01 map Xq28, complete sequence
          Length = 161084

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 43     gagatcagccgcaggatggcc 63
              |||||||||||||||||||||
Sbjct: 123648 gagatcagccgcaggatggcc 123628
to top
>gb|AC174678.2| Mus musculus BAC clone RP23-11O22 from chromosome 14, complete sequence
          Length = 224638

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 303   tggtgctggaactgctgctga 323
             |||||||||||||||||||||
Sbjct: 57517 tggtgctggaactgctgctga 57537
to top
>ref|NM_194346.2| Mus musculus ring finger protein 31 (Rnf31), mRNA
          Length = 3443

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 303  tggtgctggaactgctgctga 323
            |||||||||||||||||||||
Sbjct: 3358 tggtgctggaactgctgctga 3338
to top
>gb|AC166653.5| Mus musculus BAC clone RP24-84J23 from chromosome 14, complete
            sequence
          Length = 223142

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 299  gctgtggtgctggaactgctgctg 322
            ||||||| ||||||||||||||||
Sbjct: 9070 gctgtggggctggaactgctgctg 9047
to top
>gb|AC166822.3| Mus musculus BAC clone RP24-117F20 from chromosome 14, complete sequence
          Length = 186860

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 299    gctgtggtgctggaactgctgctg 322
              ||||||| ||||||||||||||||
Sbjct: 101768 gctgtggggctggaactgctgctg 101745
to top
>ref|XM_451099.1| Kluyveromyces lactis NRRL Y-1140, KLLA0A02233g predicted mRNA
          Length = 789

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 303 tggtgctggaactgctgctgacacagaggctgtgac 338
           ||||||||| ||||| ||||| || |||||||||||
Sbjct: 222 tggtgctggtactgccgctgataccgaggctgtgac 257
to top
>ref|XM_548226.2| PREDICTED: Canis familiaris similar to vascular endothelial zinc
           finger 1, transcript variant 1 (LOC491106), mRNA
          Length = 4525

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 299 gctgtggtgctggaactgctgctg 322
           ||||||||||||| ||||||||||
Sbjct: 497 gctgtggtgctggcactgctgctg 474
to top
>emb|CR655048.2|CNS0F4EM Tetraodon nigroviridis full-length cDNA
          Length = 835

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 303 tggtgctggaactgctgctg 322
           ||||||||||||||||||||
Sbjct: 64  tggtgctggaactgctgctg 45
to top
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 40      tccgagatcagccgcaggat 59
               ||||||||||||||||||||
Sbjct: 1791914 tccgagatcagccgcaggat 1791895
to top
>emb|AL353093.18| Human DNA sequence from clone RP11-224P11 on chromosome 10 Contains a
              single-stranded DNA binding protein (SSBP1)(SSBP)
              pseudogene, complete sequence
          Length = 156008

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 266    agaaaattcattttatggca 285
              ||||||||||||||||||||
Sbjct: 116282 agaaaattcattttatggca 116263
to top
>emb|AL121997.7|HSJ1043F6 Human DNA sequence from clone RP5-1043F6 on chromosome 1q42.11-42.3
             Contains part of the CHS1 gene for Chediak-Higashi
             syndrome 1 protein and a lactate dehydrogenase A (LDHA)
             processed pseudogene, complete sequence
          Length = 114526

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 301   tgtggtgctggaactgctgctgac 324
             ||||||||||||| ||||||||||
Sbjct: 88544 tgtggtgctggaaatgctgctgac 88521
to top
>emb|CR382121.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome A of strain NRRL
              Y-1140 of Kluyveromyces lactis
          Length = 1062590

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                  
Query: 303    tggtgctggaactgctgctgacacagaggctgtgac 338
              ||||||||| ||||| ||||| || |||||||||||
Sbjct: 199333 tggtgctggtactgccgctgataccgaggctgtgac 199298
to top
>emb|AJ132364.1|PST132364 Pseudomonas stutzeri (strain JM300) pilD, pilC, pilB and pilA genes
            and ORFX
          Length = 5625

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 49   agccgcaggatggccggatc 68
            ||||||||||||||||||||
Sbjct: 4045 agccgcaggatggccggatc 4026
to top
>gb|AC105130.8| Homo sapiens chromosome 8, clone RP11-357L10, complete sequence
          Length = 188410

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 305   gtgctggaactgctgctgac 324
             ||||||||||||||||||||
Sbjct: 50396 gtgctggaactgctgctgac 50377
to top
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 40      tccgagatcagccgcaggat 59
               ||||||||||||||||||||
Sbjct: 4616281 tccgagatcagccgcaggat 4616300
to top
>gb|AC090333.5| Homo sapiens chromosome 18, clone RP11-843P6, complete sequence
          Length = 165344

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 312   aactgctgctgacacagagg 331
             ||||||||||||||||||||
Sbjct: 24037 aactgctgctgacacagagg 24056
to top
>gb|AC009854.9| Homo sapiens chromosome 18, clone RP11-333A13, complete sequence
          Length = 207293

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 312   aactgctgctgacacagagg 331
             ||||||||||||||||||||
Sbjct: 94532 aactgctgctgacacagagg 94513
to top
>gb|AC009334.8| Homo sapiens chromosome 1, clone RP11-45L2, complete sequence
          Length = 165618

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 301   tgtggtgctggaactgctgctgac 324
             ||||||||||||| ||||||||||
Sbjct: 64002 tgtggtgctggaaatgctgctgac 63979
to top
>ref|NM_131677.1| Danio rerio proteasome (prosome, macropain) subunit, beta type, 10
           (psmb10), mRNA
          Length = 1049

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                       
Query: 283 gcaccaaacatatattgctgtggtgctggaactgctgctgacac 326
           ||||| ||||||||||| ||||| || ||||| ||||| |||||
Sbjct: 269 gcacctaacatatattgttgtggagcgggaacagctgcggacac 312
to top
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 40      tccgagatcagccgcaggat 59
               ||||||||||||||||||||
Sbjct: 1789597 tccgagatcagccgcaggat 1789578
to top
>gb|BC092899.1| Danio rerio proteasome (prosome, macropain) subunit, beta type, 10,
           mRNA (cDNA clone MGC:110363 IMAGE:7404411), complete cds
          Length = 1049

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                       
Query: 283 gcaccaaacatatattgctgtggtgctggaactgctgctgacac 326
           ||||| ||||||||||| ||||| || ||||| ||||| |||||
Sbjct: 269 gcacctaacatatattgttgtggagcgggaacagctgcggacac 312
to top
>gb|AF155577.1|AF155577 Danio rerio proteasome subunit beta 12 (PSMB12) mRNA, partial cds
          Length = 1021

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                       
Query: 283 gcaccaaacatatattgctgtggtgctggaactgctgctgacac 326
           ||||| ||||||||||| ||||| || ||||| ||||| |||||
Sbjct: 240 gcacctaacatatattgttgtggagcgggaacagctgcggacac 283
to top
>gb|BC098835.1| Rattus norvegicus proteasome (prosome, macropain) subunit, beta
           type 10, mRNA (cDNA clone MGC:112890 IMAGE:7378841),
           complete cds
          Length = 1021

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 163 aagaccgggactaccatcgtcggtctcgtgtt 194
           ||||||||||||||||||| ||| || |||||
Sbjct: 223 aagaccgggactaccatcgccggacttgtgtt 254
to top
>ref|NM_001025637.1| Rattus norvegicus proteasome (prosome, macropain) subunit, beta
           type 10 (Psmb10), mRNA
          Length = 1021

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 163 aagaccgggactaccatcgtcggtctcgtgtt 194
           ||||||||||||||||||| ||| || |||||
Sbjct: 223 aagaccgggactaccatcgccggacttgtgtt 254
to top
>gb|AE008692.1| Zymomonas mobilis subsp. mobilis ZM4, complete genome
          Length = 2056416

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 42     cgagatcagccgcaggatggccggatcg 69
              |||||||||||||||  |||||||||||
Sbjct: 880828 cgagatcagccgcagtctggccggatcg 880801


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,561,422
Number of Sequences: 3902068
Number of extensions: 2561422
Number of successful extensions: 48711
Number of sequences better than 10.0: 93
Number of HSP's better than 10.0 without gapping: 92
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 48446
Number of HSP's gapped (non-prelim): 255
length of query: 351
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 329
effective length of database: 17,147,199,772
effective search space: 5641428724988
effective search space used: 5641428724988
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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