>gb|AF123610.1|AF123610 Triticum aestivum clone RED1-TA NADPH-cytochrome P450 reductase mRNA,
            partial cds
          Length = 2333

 Score =  357 bits (180), Expect = 1e-95
 Identities = 239/255 (93%), Gaps = 9/255 (3%)
 Strand = Plus / Plus

                                                                        
Query: 14   atggtggatgccaatcccaatcgtgagtttcctgcatccatcccattgcccccggaattg 73
            ||||||||||||||||| | | |||||||| ||||||||||||||||||||||| |||||
Sbjct: 2043 atggtggatgccaatccgatt-gtgagttttctgcatccatcccattgcccccgaaattg 2101

                                                                        
Query: 74   gagttaatcggtgtaattctttgacatctaacatggttctaatatttattgtatggatgg 133
            ||||| ||||||||||||||||||||||||||||||||||||||||||||||    ||||
Sbjct: 2102 gagttcatcggtgtaattctttgacatctaacatggttctaatatttattgt----atgg 2157

                                                                        
Query: 134  atggttgaaagaataagtgctgttgtagattattagtagaacttaaaatacccctgagaa 193
            ||||||||||||||||||||||||||||   |||| ||||||||||||| ||||||||||
Sbjct: 2158 atggttgaaagaataagtgctgttgtag---attaatagaacttaaaatgcccctgagaa 2214

                                                                        
Query: 194  aattgtagcggggggatgtgaatcatacagtttgagatgagatgaggacatatcatgtat 253
            |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 2215 aattgtagcggggggatgtgaatcatacagtttgagatgagatg-ggacatatcatgtat 2273

                           
Query: 254  acattaaagaccgcc 268
            |||||||||||||||
Sbjct: 2274 acattaaagaccgcc 2288

>emb|AL606690.3|OSJN00080 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0060D06,
              complete sequence
          Length = 151506

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 88/102 (86%), Gaps = 6/102 (5%)
 Strand = Plus / Plus

                                                                          
Query: 69     aattggagttaa---tcggtgtaattctttgacatctaacatggttctaatatttattgt 125
              ||||||||||||   ||||||||||||||||||||||||||||||||  ||||||||| |
Sbjct: 141768 aattggagttaaaagtcggtgtaattctttgacatctaacatggttccgatatttattat 141827

                                                        
Query: 126    --atggatggatggttgaaagaataagt-gctgttgtagatt 164
                 |  ||||||| ||||||||||||||  ||||||||||||
Sbjct: 141828 tattatatggatgattgaaagaataagtacctgttgtagatt 141869



 Score = 40.1 bits (20), Expect = 3.9
 Identities = 36/40 (90%), Gaps = 1/40 (2%)
 Strand = Plus / Plus

                                                      
Query: 4      ctgtatgggcatggtggatgccaatcccaatcgtgagttt 43
              ||||| || ||||||| |||||||||| ||||||||||||
Sbjct: 141700 ctgtaaggccatggtgcatgccaatcc-aatcgtgagttt 141738

>emb|AL606446.1|OSJN00016 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0022F16,
             complete sequence
          Length = 119535

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 88/102 (86%), Gaps = 6/102 (5%)
 Strand = Plus / Plus

                                                                         
Query: 69    aattggagttaa---tcggtgtaattctttgacatctaacatggttctaatatttattgt 125
             ||||||||||||   ||||||||||||||||||||||||||||||||  ||||||||| |
Sbjct: 15386 aattggagttaaaagtcggtgtaattctttgacatctaacatggttccgatatttattat 15445

                                                       
Query: 126   --atggatggatggttgaaagaataagt-gctgttgtagatt 164
                |  ||||||| ||||||||||||||  ||||||||||||
Sbjct: 15446 tattatatggatgattgaaagaataagtacctgttgtagatt 15487



 Score = 40.1 bits (20), Expect = 3.9
 Identities = 36/40 (90%), Gaps = 1/40 (2%)
 Strand = Plus / Plus

                                                     
Query: 4     ctgtatgggcatggtggatgccaatcccaatcgtgagttt 43
             ||||| || ||||||| |||||||||| ||||||||||||
Sbjct: 15318 ctgtaaggccatggtgcatgccaatcc-aatcgtgagttt 15356

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 88/102 (86%), Gaps = 6/102 (5%)
 Strand = Plus / Plus

                                                                            
Query: 69       aattggagttaa---tcggtgtaattctttgacatctaacatggttctaatatttattgt 125
                ||||||||||||   ||||||||||||||||||||||||||||||||  ||||||||| |
Sbjct: 33369507 aattggagttaaaagtcggtgtaattctttgacatctaacatggttccgatatttattat 33369566

                                                          
Query: 126      --atggatggatggttgaaagaataagt-gctgttgtagatt 164
                   |  ||||||| ||||||||||||||  ||||||||||||
Sbjct: 33369567 tattatatggatgattgaaagaataagtacctgttgtagatt 33369608



 Score = 40.1 bits (20), Expect = 3.9
 Identities = 36/40 (90%), Gaps = 1/40 (2%)
 Strand = Plus / Plus

                                                        
Query: 4        ctgtatgggcatggtggatgccaatcccaatcgtgagttt 43
                ||||| || ||||||| |||||||||| ||||||||||||
Sbjct: 33369439 ctgtaaggccatggtgcatgccaatcc-aatcgtgagttt 33369477

>gb|AC104716.4| Homo sapiens chromosome 8 clone RP11-81A21 map q24.13, complete sequence
          Length = 147651

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 127    tggatggatggttgaaagaata 148
              ||||||||||||||||||||||
Sbjct: 102168 tggatggatggttgaaagaata 102189

>gb|AF216671.7| Homo sapiens chromosome 8 clone RP11-300I14 map q24.13, complete
             sequence
          Length = 183027

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 127   tggatggatggttgaaagaata 148
             ||||||||||||||||||||||
Sbjct: 79780 tggatggatggttgaaagaata 79801

>gb|AC133331.3| Homo sapiens chromosome 8 clone RP11-156O22 map q24.13, complete
             sequence
          Length = 174972

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 127   tggatggatggttgaaagaata 148
             ||||||||||||||||||||||
Sbjct: 64253 tggatggatggttgaaagaata 64274

>gb|AC009908.13| Homo sapiens chromosome 8, clone RP11-6D1, complete sequence
          Length = 174981

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 127   tggatggatggttgaaagaata 148
             ||||||||||||||||||||||
Sbjct: 64254 tggatggatggttgaaagaata 64275

>gb|AC115039.7| Mus musculus chromosome 6, clone RP24-279C2, complete sequence
          Length = 195362

 Score = 42.1 bits (21), Expect = 1.00
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 242    catatcatgtatacattaaag 262
              |||||||||||||||||||||
Sbjct: 143584 catatcatgtatacattaaag 143564

>emb|CR450724.10| Zebrafish DNA sequence from clone DKEY-168I4 in linkage group 18,
             complete sequence
          Length = 197565

 Score = 42.1 bits (21), Expect = 1.00
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 126   atggatggatggttgaaagaa 146
             |||||||||||||||||||||
Sbjct: 72793 atggatggatggttgaaagaa 72773

>ref|XM_650695.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (23.t00030)
           partial mRNA
          Length = 381

 Score = 42.1 bits (21), Expect = 1.00
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 161 gattattagtagaacttaaaatacc 185
           ||||||||||||||||| |||||||
Sbjct: 326 gattattagtagaacttcaaatacc 350

>gb|AC102132.3| Mus musculus chromosome 18, clone RP23-231D1, complete sequence
          Length = 183544

 Score = 42.1 bits (21), Expect = 1.00
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 116    tatttattgtatggatggatg 136
              |||||||||||||||||||||
Sbjct: 176010 tatttattgtatggatggatg 175990

>emb|AL596252.11| Mouse DNA sequence from clone RP23-123O10 on chromosome 11 Contains the
              3' end of the Acac gene for acetyl-Coenzyme A carboxylase,
              complete sequence
          Length = 187803

 Score = 42.1 bits (21), Expect = 1.00
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 52     catcccattgcccccggaattggagttaa 80
              ||||||||| |||| ||||||||||||||
Sbjct: 153082 catcccattccccctggaattggagttaa 153054

>emb|BX324227.16| Zebrafish DNA sequence from clone CH211-149M17 in linkage group 15,
              complete sequence
          Length = 129726

 Score = 42.1 bits (21), Expect = 1.00
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 122    ttgtatggatggatggttgaa 142
              |||||||||||||||||||||
Sbjct: 123316 ttgtatggatggatggttgaa 123296

>emb|BX247951.11| Zebrafish DNA sequence from clone DKEY-246A16 in linkage group 18,
             complete sequence
          Length = 189723

 Score = 42.1 bits (21), Expect = 1.00
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 126   atggatggatggttgaaagaa 146
             |||||||||||||||||||||
Sbjct: 97696 atggatggatggttgaaagaa 97716

>gb|AC133955.4| Mus musculus BAC clone RP23-249M4 from 6, complete sequence
          Length = 185272

 Score = 42.1 bits (21), Expect = 1.00
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 242    catatcatgtatacattaaag 262
              |||||||||||||||||||||
Sbjct: 181461 catatcatgtatacattaaag 181481

>gb|AC149313.2| Phakopsora pachyrhizi clone JGIAFNA-101K11, complete sequence
          Length = 42565

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 126   atggatggatggttgaaaga 145
             ||||||||||||||||||||
Sbjct: 36286 atggatggatggttgaaaga 36267

>gb|BT017201.1| Zea mays clone EL01N0371F12.c mRNA sequence
          Length = 1192

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 215  atcatacagtttgagatgag 234
            ||||||||||||||||||||
Sbjct: 1098 atcatacagtttgagatgag 1117

>gb|AC120339.18| Mus musculus chromosome 14, clone RP23-126A8, complete sequence
          Length = 228458

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 100   tctaacatggttctaatatttatt 123
             |||||| |||||||||||||||||
Sbjct: 53722 tctaacctggttctaatatttatt 53745

>gb|AC089991.2| Bos taurus clone RP42-194K3, complete sequence
          Length = 159196

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 162   attattagtagaacttaaaa 181
             ||||||||||||||||||||
Sbjct: 75150 attattagtagaacttaaaa 75169

>gb|DP000008.1| Bos taurus target 1 genomic scaffold
          Length = 2072671

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 162    attattagtagaacttaaaa 181
              ||||||||||||||||||||
Sbjct: 831711 attattagtagaacttaaaa 831730

>emb|BX537109.14| Zebrafish DNA sequence from clone DKEY-86P22 in linkage group 14,
             complete sequence
          Length = 231134

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 126   atggatggatggttgaaagaataa 149
             |||||||||||||||| |||||||
Sbjct: 70468 atggatggatggttgagagaataa 70491

>emb|AL096771.11|HSJ238D15 Human DNA sequence from clone RP1-238D15 on chromosome 6q12-14.3
            Contains 3' end of COL12A1 gene  for collagen, type XII,
            alpha 1, complete sequence
          Length = 112292

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 148  aagtgctgttgtagattatt 167
            ||||||||||||||||||||
Sbjct: 3509 aagtgctgttgtagattatt 3528

>emb|CR382401.1| Plasmodium falciparum chromosome 6, complete sequence; segment 4/5
          Length = 337203

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 109    gttctaatatttattgtatg 128
              ||||||||||||||||||||
Sbjct: 283658 gttctaatatttattgtatg 283639

>gb|AC084430.13| Homo sapiens 12p BAC RP11-96B19 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 72022

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 114   aatatttattgtatggatggatgg 137
             ||||||||||| ||||||||||||
Sbjct: 10318 aatatttattggatggatggatgg 10295

>gb|AC158380.2| Mus musculus BAC clone RP24-178I16 from chromosome 6, complete sequence
          Length = 168179

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 114    aatatttattgtatggatggatgg 137
              ||||||||||| ||||||||||||
Sbjct: 147007 aatatttattgcatggatggatgg 147030

>gb|AC153646.3| Mus musculus BAC clone RP24-493K8 from chromosome 13, complete sequence
          Length = 166314

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 213   gaatcatacagtttgagatg 232
             ||||||||||||||||||||
Sbjct: 46888 gaatcatacagtttgagatg 46907

>gb|AF165906.1|AF165901S6 Homo sapiens GABA receptor subunit alpha 3 (GABRA3) gene, exon 6
          Length = 822

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 118 tttattgtatggatggatgg 137
           ||||||||||||||||||||
Sbjct: 120 tttattgtatggatggatgg 139

>gb|AC160147.6| Mus musculus 10 BAC RP24-576A6 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 145198

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 9     tgggcatggtggatgccaat 28
             ||||||||||||||||||||
Sbjct: 31225 tgggcatggtggatgccaat 31206

>gb|AF282854.4| Homo sapiens chromosome X clone RP11-157E12 map q28, complete sequence
          Length = 187411

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 118   tttattgtatggatggatgg 137
             ||||||||||||||||||||
Sbjct: 10851 tttattgtatggatggatgg 10832

>gb|AC116666.2| Homo sapiens chromosome X clone RP11-329E24 map q28, complete sequence
          Length = 169351

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 118    tttattgtatggatggatgg 137
              ||||||||||||||||||||
Sbjct: 142868 tttattgtatggatggatgg 142849

>emb|BX005235.8| Zebrafish DNA sequence from clone DKEY-68L7 in linkage group 23,
             complete sequence
          Length = 141636

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 126   atggatggatggttgaaagaataa 149
             ||||||||||||||| ||||||||
Sbjct: 31573 atggatggatggttggaagaataa 31550

>gb|AY103952.1| Zea mays PCO116681 mRNA sequence
          Length = 1813

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 215  atcatacagtttgagatgag 234
            ||||||||||||||||||||
Sbjct: 1670 atcatacagtttgagatgag 1689



 Score = 40.1 bits (20), Expect = 3.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 74   gagttaatcggtgtaattctttgacatctaac 105
            ||||| ||| ||| ||||||||||||||||||
Sbjct: 1526 gagttgatcagtgcaattctttgacatctaac 1557

>gb|AC127590.3| Mus musculus BAC clone RP23-147I5 from 13, complete sequence
          Length = 208251

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 213    gaatcatacagtttgagatg 232
              ||||||||||||||||||||
Sbjct: 177740 gaatcatacagtttgagatg 177759

>emb|AL627385.13| Mouse DNA sequence from clone RP23-229I19 on chromosome X, complete
             sequence
          Length = 209817

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 39    agtttcctgcatccatccca 58
             ||||||||||||||||||||
Sbjct: 16387 agtttcctgcatccatccca 16368

>gb|U81834.1|HSU81834 Human cosmid LL12NC01-95H4, ETV6 gene, exon 2 and partial cds
          Length = 36558

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 114   aatatttattgtatggatggatgg 137
             ||||||||||| ||||||||||||
Sbjct: 26299 aatatttattggatggatggatgg 26322

>emb|AL929508.6| Zebrafish DNA sequence from clone CH211-158G13, complete sequence
          Length = 180029

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 126    atggatggatggttgaaagaataa 149
              ||||||||||||||| ||||||||
Sbjct: 173374 atggatggatggttggaagaataa 173397


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,093,535
Number of Sequences: 3902068
Number of extensions: 4093535
Number of successful extensions: 74129
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 73991
Number of HSP's gapped (non-prelim): 134
length of query: 301
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 279
effective length of database: 17,147,199,772
effective search space: 4784068736388
effective search space used: 4784068736388
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)