| Clone Name | baal15a11 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC102220.8| Mus musculus chromosome 7, clone RP24-117E17, complete sequence Length = 182996 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 316 ccaaataaaatgaagtgctat 336 ||||||||||||||||||||| Sbjct: 38766 ccaaataaaatgaagtgctat 38746
>gb|AC102299.11| Mus musculus chromosome 7, clone RP24-397O2, complete sequence Length = 167677 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 316 ccaaataaaatgaagtgctat 336 ||||||||||||||||||||| Sbjct: 142014 ccaaataaaatgaagtgctat 141994
>emb|AL451124.13| Human DNA sequence from clone RP11-20P5 on chromosome 9 Contains the 3' end of a variant of a novel gene (FLJ31810) and a novel pseudogene (FLJ37424), complete sequence Length = 164291 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 318 aaataaaatgaagtgctatgg 338 ||||||||||||||||||||| Sbjct: 55369 aaataaaatgaagtgctatgg 55389
>dbj|AP007164.1| Aspergillus oryzae RIB40 genomic DNA, SC111 Length = 2356219 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 110 caaatcaacaatgtgcctcacttag 134 |||||||||||||||| |||||||| Sbjct: 1543442 caaatcaacaatgtgcttcacttag 1543418
>gb|AC161490.7| Mus musculus chromosome 7, clone RP23-307M23, complete sequence Length = 169596 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 316 ccaaataaaatgaagtgcta 335 |||||||||||||||||||| Sbjct: 6964 ccaaataaaatgaagtgcta 6945
>gb|AC132260.3| Mus musculus BAC clone RP24-370C1 from chromosome 13, complete sequence Length = 160903 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 ttccaaggctgatgctctga 43 |||||||||||||||||||| Sbjct: 137985 ttccaaggctgatgctctga 137966
>ref|XM_816535.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053508461.360) partial mRNA Length = 2424 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 tggtgcagaaagaagcaatg 172 |||||||||||||||||||| Sbjct: 891 tggtgcagaaagaagcaatg 872
>gb|BC043730.1| Xenopus laevis MAP/microtubule affinity-regulating kinase 2, mRNA (cDNA clone MGC:52504 IMAGE:4930252), complete cds Length = 3362 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 aaatctattccaaataaaat 326 |||||||||||||||||||| Sbjct: 2897 aaatctattccaaataaaat 2878
>gb|AC069562.51| Mus musculus strain C57BL/6J clone rp23-317e13 map 13, complete sequence Length = 215278 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 ttccaaggctgatgctctga 43 |||||||||||||||||||| Sbjct: 11036 ttccaaggctgatgctctga 11017
>ref|NM_001030369.1| Xenopus tropicalis mark2 protein (mark2), mRNA Length = 3350 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 aaatctattccaaataaaat 326 |||||||||||||||||||| Sbjct: 2846 aaatctattccaaataaaat 2827
>gb|BC090574.1| Xenopus tropicalis mark2 protein, mRNA (cDNA clone MGC:69238 IMAGE:5307876), complete cds Length = 3350 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 aaatctattccaaataaaat 326 |||||||||||||||||||| Sbjct: 2846 aaatctattccaaataaaat 2827
>emb|AL732488.7| Zebrafish DNA sequence from clone RP71-1C10 in linkage group 12 Contains part of a novel ring finger gene, a novel zinc finger pseudogene, a novel zinc finger gene and a novel gene similar to valop (vertebrate ancient long opsin), complete sequence Length = 165151 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 259 tgctgcaacacagacctctgcaac 282 ||||||||||||||| |||||||| Sbjct: 51208 tgctgcaacacagacttctgcaac 51185
>emb|AL161558.2|ATCHRIV58 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 58 Length = 193550 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 aatttcaaaatctcattcgt 251 |||||||||||||||||||| Sbjct: 85780 aatttcaaaatctcattcgt 85799
>emb|AL031018.1|ATF7H19 Arabidopsis thaliana DNA chromosome 4, BAC clone F7H19 (ESSA project) Length = 139316 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 aatttcaaaatctcattcgt 251 |||||||||||||||||||| Sbjct: 56693 aatttcaaaatctcattcgt 56712
>gb|AC005170.3| Arabidopsis thaliana chromosome 2 clone T29E15 map CIC06C07, complete sequence Length = 108056 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 ttcatcaaatcaacaatgtg 124 |||||||||||||||||||| Sbjct: 20535 ttcatcaaatcaacaatgtg 20516 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 ttcatcaaatcaacaatgtg 124 |||||||||||||||||||| Sbjct: 7405 ttcatcaaatcaacaatgtg 7386
>tpg|BK001596.1| TPA: TPA_exp: Emericella nidulans transposon MATE-5, complete sequence Length = 6317 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 agaaatctattatgaaggtg 154 |||||||||||||||||||| Sbjct: 2027 agaaatctattatgaaggtg 2046
>tpg|BK001595.1| TPA: TPA_exp: Emericella nidulans transposon MATE-4 transposon and Tc1/mariner-like element, complete sequence Length = 7477 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 gagaaatctattatgaaggt 153 |||||||||||||||||||| Sbjct: 1819 gagaaatctattatgaaggt 1838
>gb|AC079613.7| Homo sapiens BAC clone RP11-325O22 from 2, complete sequence Length = 164548 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 226 tatgcaaatttcaaaatctcattc 249 ||||||||||||||||| |||||| Sbjct: 48643 tatgcaaatttcaaaatgtcattc 48620
>gb|AF509738.1| Xenopus laevis Ser/Thr protein kinase PAR-1B alpha mRNA, complete cds Length = 3483 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 aaatctattccaaataaaat 326 |||||||||||||||||||| Sbjct: 2832 aaatctattccaaataaaat 2813
>ref|XM_311972.2| Anopheles gambiae str. PEST ENSANGP00000010845 (ENSANGG00000008356), partial mRNA Length = 603 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 295 agcgcgcccagcaaatctat 314 |||||||||||||||||||| Sbjct: 128 agcgcgcccagcaaatctat 147
>ref|XM_563184.1| Anopheles gambiae str. PEST ENSANGP00000026898 (ENSANGG00000008356), partial mRNA Length = 972 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 295 agcgcgcccagcaaatctat 314 |||||||||||||||||||| Sbjct: 194 agcgcgcccagcaaatctat 213
>emb|CR847564.6| Zebrafish DNA sequence from clone DKEY-190E10 in linkage group 14, complete sequence Length = 122704 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 259 tgctgcaacacagacctctgcaac 282 ||||||||||||||| |||||||| Sbjct: 80723 tgctgcaacacagacttctgcaac 80700 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,278,673 Number of Sequences: 3902068 Number of extensions: 4278673 Number of successful extensions: 82027 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 22 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 81985 Number of HSP's gapped (non-prelim): 42 length of query: 383 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 361 effective length of database: 17,147,199,772 effective search space: 6190139117692 effective search space used: 6190139117692 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)