ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal14j09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1M3KSL_DROME (Q95UN8) Mitogen-activated protein kinase kinase kin... 31 1.6
2TKT1_YEAST (P23254) Transketolase 1 (EC 2.2.1.1) (TK 1) 30 2.7
3EZY3_CHLRE (Q08356) Ezy-1 protein (Fragment) 30 4.5
4ACOC_PSEPU (Q59695) Dihydrolipoyllysine-residue acetyltransferas... 30 4.5
5STK23_MOUSE (Q9Z0G2) Serine/threonine-protein kinase 23 (EC 2.7.... 29 5.9
6STK23_HUMAN (Q9UPE1) Serine/threonine-protein kinase 23 (EC 2.7.... 29 5.9
7DHN2_HORVU (P12952) Dehydrin DHN2 (B9) 29 5.9
8CO4A1_CAEEL (P17139) Collagen alpha-1(IV) chain precursor 29 7.7

>M3KSL_DROME (Q95UN8) Mitogen-activated protein kinase kinase kinase (EC|
           2.7.11.25) (Mixed lineage kinase) (dMLK) (Protein
           slipper)
          Length = 1161

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 20/73 (27%), Positives = 34/73 (46%)
 Frame = -1

Query: 261 SLSLCRIQLPHQGTPSYSGFPNRLELFALEFWPLRTGTRGRASVHLPWGNTPSHRR*RSA 82
           +++  R +    G+PS+SG         L    L  G +G+      WG +  H+R RS 
Sbjct: 512 TITAVRDKAEQPGSPSFSG---------LRIVALTDGHKGKT-----WGPSTMHQRERSL 557

Query: 81  MPARTAGEAPSPP 43
           +P++ +G  P  P
Sbjct: 558 LPSQLSGGQPEWP 570



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>TKT1_YEAST (P23254) Transketolase 1 (EC 2.2.1.1) (TK 1)|
          Length = 679

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
 Frame = +3

Query: 174 PEQRALVDLET--HYTKEYLDEEVESCTRRAILYKEYVKGISSTGMQCNCGFEGQINACW 347
           P++  +V  E   HY K  L   VE+  +   L+ EY K     G +      GQ+ A W
Sbjct: 282 PDKSFVVPQEVYDHYQKTILKPGVEANNKWNKLFSEYQKKFPELGAELARRLSGQLPANW 341

Query: 348 THKVTT 365
             K+ T
Sbjct: 342 ESKLPT 347



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>EZY3_CHLRE (Q08356) Ezy-1 protein (Fragment)|
          Length = 297

 Score = 29.6 bits (65), Expect = 4.5
 Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
 Frame = +3

Query: 12  PSMGAMISCKLAAMAPHRLSSLALLNV-----TGGGMECFPKVDGQMLSLAFRFLRARTP 176
           P++  +++C   AMAP +  +LAL+ +     TGGG      VDG +       L+   P
Sbjct: 175 PTLALVLACGYLAMAPRQYRALALVPMILPGKTGGG------VDGALTREGLSLLKKLRP 228

Query: 177 EQRALVDLETHY 212
               L D +  +
Sbjct: 229 GISGLADKDKQW 240



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>ACOC_PSEPU (Q59695) Dihydrolipoyllysine-residue acetyltransferase component of|
           acetoin cleaving system (EC 2.3.1.12) (Acetoin
           dehydrogenase E2 component) (Dihydrolipoamide
           acetyltransferase component of acetoin cleaving system)
          Length = 370

 Score = 29.6 bits (65), Expect = 4.5
 Identities = 16/42 (38%), Positives = 25/42 (59%)
 Frame = +3

Query: 15  SMGAMISCKLAAMAPHRLSSLALLNVTGGGMECFPKVDGQML 140
           SMG  +S  +A +AP R++SL+L+   G G      ++GQ L
Sbjct: 207 SMGGAVSLNVAGLAPQRVASLSLIASAGLG----EAINGQYL 244



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>STK23_MOUSE (Q9Z0G2) Serine/threonine-protein kinase 23 (EC 2.7.11.1)|
           (Muscle-specific serine kinase 1) (MSSK-1)
          Length = 565

 Score = 29.3 bits (64), Expect = 5.9
 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
 Frame = +3

Query: 336 NACWTHKVTTKELDT--IRAAGFLVSVIHG-RHDIIAQVCHARRLA 464
           NACW HK  T+++ T   RA   L+   +G   DI +  C A  LA
Sbjct: 410 NACWVHKHFTEDIQTRQYRAVEVLIGAEYGPPADIWSTACMAFELA 455



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>STK23_HUMAN (Q9UPE1) Serine/threonine-protein kinase 23 (EC 2.7.11.1)|
           (Muscle-specific serine kinase 1) (MSSK-1)
          Length = 533

 Score = 29.3 bits (64), Expect = 5.9
 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
 Frame = +3

Query: 336 NACWTHKVTTKELDT--IRAAGFLVSVIHG-RHDIIAQVCHARRLA 464
           NACW HK  T+++ T   RA   L+   +G   DI +  C A  LA
Sbjct: 378 NACWVHKHFTEDIQTRQYRAVEVLIGAEYGPPADIWSTACMAFELA 423



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>DHN2_HORVU (P12952) Dehydrin DHN2 (B9)|
          Length = 143

 Score = 29.3 bits (64), Expect = 5.9
 Identities = 16/37 (43%), Positives = 19/37 (51%)
 Frame = -2

Query: 125 YLGETLHPTAGDVQQCQRGQPVRRHRRQFAGNHGTHG 15
           Y G+T H T   V++   GQPV  H     G  GTHG
Sbjct: 3   YQGQTGHATTDKVEEY--GQPVAGHGGATGGPTGTHG 37



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>CO4A1_CAEEL (P17139) Collagen alpha-1(IV) chain precursor|
          Length = 1759

 Score = 28.9 bits (63), Expect = 7.7
 Identities = 21/63 (33%), Positives = 25/63 (39%), Gaps = 3/63 (4%)
 Frame = +2

Query: 47   GDGASPAVLAGIAERHRRW-DGV--FPQGRWTDALPRVPVLKGQNSRAKSSSRFGNPLYE 217
            GD   P +     E   R  DGV  +P    TD LP +P   GQ      +   G P Y 
Sbjct: 967  GDNGLPGLEGECGEEGSRGLDGVPGYPGEHGTDGLPGLPGADGQPGFVGEAGEPGTPGYR 1026

Query: 218  GVP 226
            G P
Sbjct: 1027 GQP 1029


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,506,596
Number of Sequences: 219361
Number of extensions: 1473547
Number of successful extensions: 4028
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3939
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4028
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3420806017
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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