ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal14j08 |
|---|---|
| Clone Library Name | barley_pub |
>SF3A1_ARATH (Q8RXF1) Probable splicing factor 3 subunit 1| Length = 785 Score = 136 bits (343), Expect = 2e-32 Identities = 93/194 (47%), Positives = 105/194 (54%), Gaps = 41/194 (21%) Frame = +3 Query: 3 LAPDDEISRNIIGLARTRPDIFGTTEEEVSNAVKAEIEKKKDEQPKQVIWDGHSGSIGWT 182 LA DDEI++NI+GLAR RPDIFGTTEEEVSNAVKAEIEKKKDEQPKQVIWDGH+GSIG T Sbjct: 455 LAQDDEIAKNIVGLARLRPDIFGTTEEEVSNAVKAEIEKKKDEQPKQVIWDGHTGSIGRT 514 Query: 183 ATQAMS--IGGEEQGDXXXXXXXXXXXXXXXXXXX-------------XLSLVNVPRFTP 317 A QA+S GEEQGD L+L N+PR P Sbjct: 515 ANQALSQNANGEEQGDGVYGDPNSFPGPAALPPPRPGVPIVRPLPPPPNLAL-NLPRPPP 573 Query: 318 N------------PM--PYHVQ-------PPHH---MQGVPPHMMSNMHPPLPPGQQ--H 419 + PM P H Q PP H M PP M MH P PPG Q H Sbjct: 574 SAQYPGAPRPLGVPMMQPMHQQHQLTMPGPPGHPQMMMNRPPQMQPGMHVPPPPGSQFAH 633 Query: 420 MIRMSGPMGHMPNS 461 +++ P G +P S Sbjct: 634 HMQIPRPYGQLPPS 647
>SF3A1_MOUSE (Q8K4Z5) Splicing factor 3 subunit 1 (SF3a120)| Length = 791 Score = 43.5 bits (101), Expect = 3e-04 Identities = 37/142 (26%), Positives = 53/142 (37%), Gaps = 1/142 (0%) Frame = +3 Query: 6 APDDEISRNIIGLARTRPDIFGTTEEEVSNAVKAEIEKKKDEQPKQVIWDGHSGSIGWTA 185 AP +I ++ LA R DIFG E + + E +K +E+ V WDGHSGS+ T Sbjct: 455 APGLDIESSLKQLAERRTDIFGVEETAIGKKIGEEEIQKPEEK---VTWDGHSGSMARTQ 511 Query: 186 TQAM-SIGGEEQGDXXXXXXXXXXXXXXXXXXXXLSLVNVPRFTPNPMPYHVQPPHHMQG 362 A +I +EQ + + PN +P PP Sbjct: 512 QAAQANITLQEQIEAIHKAKGLVPEDDTKE--------KIGPSKPNEIPQQPPPPSSATN 563 Query: 363 VPPHMMSNMHPPLPPGQQHMIR 428 +P P PP +R Sbjct: 564 IPSSAPPITSVPRPPAMPPPVR 585
>SF3A1_HUMAN (Q15459) Splicing factor 3 subunit 1 (Spliceosome-associated| protein 114) (SAP 114) (SF3a120) Length = 793 Score = 43.1 bits (100), Expect = 4e-04 Identities = 38/138 (27%), Positives = 54/138 (39%), Gaps = 4/138 (2%) Frame = +3 Query: 6 APDDEISRNIIGLARTRPDIFGTTEEEVSNAVKAEIEKKKDEQPKQVIWDGHSGSIGWTA 185 AP +I ++ LA R DIFG E + + E +K +E+ V WDGHSGS+ T Sbjct: 457 APGLDIESSLKQLAERRTDIFGVEETAIGKKIGEEEIQKPEEK---VTWDGHSGSMARTQ 513 Query: 186 TQAM-SIGGEEQGDXXXXXXXXXXXXXXXXXXXXLSLVNVPRFTPNPMPYHVQPPHHMQG 362 A +I +EQ + + PN +P PP Sbjct: 514 QAAQANITLQEQIEAIHKAKGLVPEDDTKE--------KIGPSKPNEIPQQPPPPSSATN 565 Query: 363 VP---PHMMSNMHPPLPP 407 +P P + S PP P Sbjct: 566 IPSSAPPITSVPRPPTMP 583
>HRG_RABIT (Q28640) Histidine-rich glycoprotein precursor| (Histidine-proline-rich glycoprotein) (HPRG) (Fragment) Length = 526 Score = 36.6 bits (83), Expect = 0.033 Identities = 21/56 (37%), Positives = 24/56 (42%), Gaps = 4/56 (7%) Frame = +3 Query: 315 PNPMPYHVQPP----HHMQGVPPHMMSNMHPPLPPGQQHMIRMSGPMGHMPNSIPP 470 P P +H P HH G PPH HPP P +H P GH P+ PP Sbjct: 328 PPPHGHHPHGPPPHGHHPHGPPPHG----HPPHGPPPRHPPHGPPPHGHPPHGPPP 379 Score = 34.7 bits (78), Expect = 0.13 Identities = 22/53 (41%), Positives = 24/53 (45%), Gaps = 1/53 (1%) Frame = +3 Query: 303 PRFTPNPMPYHVQPPHHMQGVPPHMMSNMHPPL-PPGQQHMIRMSGPMGHMPN 458 PR P+ P H PPH G PPH HPP PP H P GH P+ Sbjct: 360 PRHPPHGPPPHGHPPH---GPPPH----GHPPHGPPPHGHPPHGPPPHGHPPH 405 Score = 34.7 bits (78), Expect = 0.13 Identities = 22/54 (40%), Positives = 24/54 (44%), Gaps = 2/54 (3%) Frame = +3 Query: 315 PNPMPYHVQPPHH-MQGVPPHMMSNMHPPL-PPGQQHMIRMSGPMGHMPNSIPP 470 P+ P H PP H G PPH HPP PP H P GH P+ PP Sbjct: 350 PHGHPPHGPPPRHPPHGPPPH----GHPPHGPPPHGHPPHGPPPHGHPPHGPPP 399
>GLI3_MOUSE (Q61602) Zinc finger protein GLI3| Length = 1596 Score = 35.4 bits (80), Expect = 0.074 Identities = 37/163 (22%), Positives = 60/163 (36%), Gaps = 8/163 (4%) Frame = +3 Query: 6 APDDEISRNIIGLARTRPDIFGTTEEEVSNAVKAEIEKKKDEQPKQVIWDGHSGSIGWTA 185 A + + + N IG TR D+ AV + +DE P Q+ +I Sbjct: 10 ATERKKAENSIGKCPTRTDVS-------EKAVASSTTSNEDESPGQIYHRERRNAI---T 59 Query: 186 TQAMSIGG----EEQGDXXXXXXXXXXXXXXXXXXXXLSLVNVPR----FTPNPMPYHVQ 341 Q S+ G E+ L+ ++P F +P +++ Sbjct: 60 MQPQSVQGLNKISEEPSTSSDERASLIKKEIHGSLPHLAEPSLPYRGTVFAMDPRNGYME 119 Query: 342 PPHHMQGVPPHMMSNMHPPLPPGQQHMIRMSGPMGHMPNSIPP 470 P +H PPH+ HPP+P +H G + P+ IPP Sbjct: 120 PHYH----PPHLFPAFHPPVPIDARH---HEGRYHYDPSPIPP 155
>FOXJ3_HUMAN (Q9UPW0) Forkhead box protein J3| Length = 622 Score = 34.7 bits (78), Expect = 0.13 Identities = 16/52 (30%), Positives = 23/52 (44%) Frame = +3 Query: 303 PRFTPNPMPYHVQPPHHMQGVPPHMMSNMHPPLPPGQQHMIRMSGPMGHMPN 458 P+ P P P+ PPH G+P H + HP P Q ++ P P+ Sbjct: 373 PQMHPQPSPH---PPHRPHGLPQHPQRSPHPAPHPQQHSQLQSPHPQHPSPH 421
>CREB5_HUMAN (Q02930) cAMP response element-binding protein 5 (CRE-BPa)| Length = 508 Score = 34.3 bits (77), Expect = 0.16 Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 6/47 (12%) Frame = +3 Query: 303 PRFTPNPMPYHVQP-PHH-----MQGVPPHMMSNMHPPLPPGQQHMI 425 P P+P P+H Q PHH + P H ++ HPPL G Q + Sbjct: 297 PAHHPHPQPHHQQNHPHHHSHSHLHAHPAHHQTSPHPPLHTGNQAQV 343
>SFPQ_MOUSE (Q8VIJ6) Splicing factor, proline- and glutamine-rich| (Polypyrimidine tract-binding protein-associated splicing factor) (PTB-associated splicing factor) (PSF) (DNA-binding p52/p100 complex, 100 kDa subunit) Length = 699 Score = 34.3 bits (77), Expect = 0.16 Identities = 21/54 (38%), Positives = 25/54 (46%), Gaps = 2/54 (3%) Frame = +3 Query: 315 PNPMPYHVQPPHHMQGVPPHMMSNMHPPLPPGQQHMIRMSGPMGHMP--NSIPP 470 P P QPP H Q PPH + PP PP + + GP G P +S PP Sbjct: 71 PPQQPPPQQPPPHQQP-PPHQPPHQQPPPPPQESKPVVPQGP-GSAPGVSSAPP 122
>CREB5_MOUSE (Q8K1L0) cAMP response element-binding protein 5 (CRE-BPa)| (Fragment) Length = 353 Score = 34.3 bits (77), Expect = 0.16 Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 6/47 (12%) Frame = +3 Query: 303 PRFTPNPMPYHVQP-PHH-----MQGVPPHMMSNMHPPLPPGQQHMI 425 P P+P P+H Q PHH + P H ++ HPPL G Q + Sbjct: 142 PAHHPHPQPHHQQNHPHHHSHSHLHAHPAHHQTSPHPPLHTGNQAQV 188
>RCO1_NEUCR (P78706) Transcriptional repressor rco-1| Length = 604 Score = 33.5 bits (75), Expect = 0.28 Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 2/54 (3%) Frame = +3 Query: 315 PNPMPYHVQPPHHMQGVPPHMMSNMHPPLPPGQQHMIRM--SGPMGHMPNSIPP 470 P P P + P HM PP + PP PP QQ + GP G P + PP Sbjct: 131 PPPPPQQQEQPAHMPA-PPGLQGPPPPPPPPSQQPPFQQQYQGPQG--PGNFPP 181
>GLI3_PANTR (Q5IS56) Zinc finger protein GLI3| Length = 1580 Score = 33.5 bits (75), Expect = 0.28 Identities = 17/54 (31%), Positives = 27/54 (50%) Frame = +3 Query: 309 FTPNPMPYHVQPPHHMQGVPPHMMSNMHPPLPPGQQHMIRMSGPMGHMPNSIPP 470 F +P +++P +H PPH+ HPP+P +H G + P+ IPP Sbjct: 109 FAMDPRNGYMEPHYH----PPHLFPAFHPPVPIDARH---HEGRYHYDPSPIPP 155
>GLI3_HUMAN (P10071) Zinc finger protein GLI3| Length = 1580 Score = 33.5 bits (75), Expect = 0.28 Identities = 17/54 (31%), Positives = 27/54 (50%) Frame = +3 Query: 309 FTPNPMPYHVQPPHHMQGVPPHMMSNMHPPLPPGQQHMIRMSGPMGHMPNSIPP 470 F +P +++P +H PPH+ HPP+P +H G + P+ IPP Sbjct: 109 FAMDPRNGYMEPHYH----PPHLFPAFHPPVPIDARH---HEGRYHYDPSPIPP 155
>PYGO_DROME (Q9V9W8) Protein pygopus (Protein gammy legs)| Length = 815 Score = 33.5 bits (75), Expect = 0.28 Identities = 21/53 (39%), Positives = 24/53 (45%), Gaps = 8/53 (15%) Frame = +3 Query: 315 PNPMPYHVQPPHHMQGVPPHMMS--NMH------PPLPPGQQHMIRMSGPMGH 449 PN M + P HH G PPHMM MH PP G + M GP G+ Sbjct: 580 PNMMNHPHHPHHHPGGPPPHMMGGPGMHGGPAGMPPHMGGGPNPHMMGGPHGN 632
>SNRPA_MOUSE (Q62189) U1 small nuclear ribonucleoprotein A (U1 snRNP protein A)| (U1A protein) (U1-A) Length = 286 Score = 32.7 bits (73), Expect = 0.48 Identities = 23/53 (43%), Positives = 26/53 (49%), Gaps = 3/53 (5%) Frame = +3 Query: 321 PMPYHVQPPHHMQGVPPHM-MSNMHPP--LPPGQQHMIRMSGPMGHMPNSIPP 470 PMP + HHM G PP+M M PP L PGQ M P MP +PP Sbjct: 150 PMPQAPRIMHHMPGQPPYMPPPGMIPPPGLAPGQIPPGAMP-PQQLMPGQMPP 201
>SALM_DROME (P39770) Homeotic protein spalt-major| Length = 1365 Score = 32.7 bits (73), Expect = 0.48 Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 9/60 (15%) Frame = +3 Query: 303 PRFTPNPMPYHVQPPHHM---QGVPPHMM-----SNMHPPLPPG-QQHMIRMSGPMGHMP 455 PR TP+P H P HH G PP + + MHP PG Q H+ + P G +P Sbjct: 660 PRRTPSPSSEHRSPHHHRHSHMGYPPVVQPIQPAALMHPQSSPGSQSHLDHLPTP-GQLP 718
>OSA_DROME (Q8IN94) Trithorax group protein osa (Protein eyelid)| Length = 2716 Score = 32.7 bits (73), Expect = 0.48 Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 1/36 (2%) Frame = +3 Query: 342 PPHHMQGVPPHMMSNMHPPL-PPGQQHMIRMSGPMG 446 PPHHM PPH +NM PP P Q M++ P G Sbjct: 809 PPHHMG--PPHGPTNMGPPTSTPPQSQMLQGGQPQG 842 Score = 29.3 bits (64), Expect = 5.3 Identities = 23/80 (28%), Positives = 29/80 (36%), Gaps = 23/80 (28%) Frame = +3 Query: 300 VPRFTPNPM---PYHVQPPHHM-------QGVPPHMMSNMHPPL-------------PPG 410 +P+ P M PY + PP QG P MMS PP+ PP Sbjct: 1670 LPQVGPGGMVKPPYAMPPPPSQGVGQQVGQGPPGGMMSQKPPPMPGQAMQQQPLQQQPPS 1729 Query: 411 QQHMIRMSGPMGHMPNSIPP 470 QH P P+ +PP Sbjct: 1730 HQHPHPHQHPQHQHPHQMPP 1749
>UMP1_ARATH (Q9LKA5) Unknown mitochondrial protein At3g15000| Length = 395 Score = 32.7 bits (73), Expect = 0.48 Identities = 23/57 (40%), Positives = 24/57 (42%), Gaps = 7/57 (12%) Frame = +3 Query: 321 PMPYHV----QPPHHMQGV---PPHMMSNMHPPLPPGQQHMIRMSGPMGHMPNSIPP 470 P P H+ PP HM G PPHM N PP PP M GP P PP Sbjct: 252 PPPPHIGGSAPPPPHMGGSAPPPPHMGQNYGPP-PPN-----NMGGPRHPPPYGAPP 302
>ROBO4_HUMAN (Q8WZ75) Roundabout homolog 4 precursor (Magic roundabout)| Length = 1007 Score = 32.3 bits (72), Expect = 0.63 Identities = 15/35 (42%), Positives = 23/35 (65%) Frame = +2 Query: 269 PASPTTFLGQCSPIYTQSNALSCPTPSSYARSSTA 373 PA+P L CSP Q+++LS P+P+S SS++ Sbjct: 747 PAAPIPILSPCSPPSPQASSLSGPSPASSRLSSSS 781
>RNC_HUMAN (Q9NRR4) Ribonuclease III (EC 3.1.26.3) (RNase III) (Drosha) (p241)| Length = 1374 Score = 32.3 bits (72), Expect = 0.63 Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 7/59 (11%) Frame = +3 Query: 315 PNPMPYHVQPP----HHMQGVPPHMM---SNMHPPLPPGQQHMIRMSGPMGHMPNSIPP 470 P PMP PP QG P MM S HPP PP + P G+ ++ PP Sbjct: 121 PPPMPCPNNPPVPGAPPGQGTFPFMMPPPSMPHPPPPPVMPQQVNYQYPPGYSHHNFPP 179
>WBP11_MOUSE (Q923D5) WW domain-binding protein 11 (WBP-11)| Length = 641 Score = 32.0 bits (71), Expect = 0.82 Identities = 33/134 (24%), Positives = 49/134 (36%), Gaps = 3/134 (2%) Frame = +3 Query: 78 EEEVSNAVKAEIEKKKDEQPKQVIWDGHSGSIGWTATQAMSIGGEEQGDXXXXXXXXXXX 257 EE+ ++ +E EK+ +Q K DGHS S ++Q + Sbjct: 355 EEDADDSDDSEAEKQSQKQHKD---DGHSDSTAAASSQQQA------------------- 392 Query: 258 XXXXXXXXXLSLVNVPRFTPNPMPYHVQPPHHMQGVPPHMMSNMHPPLPPGQQHMIR--- 428 S + P P P P + PP PP + + P PPG +R Sbjct: 393 ---PPQSAPASQIQAP---PMPGPPPLGPPPAPPLRPPGPPTGLPPGPPPGAPPFLRPPG 446 Query: 429 MSGPMGHMPNSIPP 470 M G G +P +PP Sbjct: 447 MPGIRGPLPRLLPP 460
>RBBP6_HUMAN (Q7Z6E9) Retinoblastoma-binding protein 6 (p53-associated cellular| protein of testis) (Proliferation potential-related protein) (Protein P2P-R) (Retinoblastoma-binding Q protein 1) (Protein RBQ-1) Length = 1792 Score = 32.0 bits (71), Expect = 0.82 Identities = 25/65 (38%), Positives = 25/65 (38%), Gaps = 4/65 (6%) Frame = +3 Query: 288 SLVNVPRFTPNPMPYHVQPPHHM----QGVPPHMMSNMHPPLPPGQQHMIRMSGPMGHMP 455 SL P F P P P PP H GVPP S P PPGQ S P P Sbjct: 549 SLPATPVFVPVPPPPLYPPPPHTLPLPPGVPPPQFS---PQFPPGQPPPAGYSVP----P 601 Query: 456 NSIPP 470 PP Sbjct: 602 PGFPP 606
>WDR33_HUMAN (Q9C0J8) WD-repeat protein 33 (WD-repeat protein WDC146)| Length = 1336 Score = 32.0 bits (71), Expect = 0.82 Identities = 19/49 (38%), Positives = 21/49 (42%) Frame = +3 Query: 324 MPYHVQPPHHMQGVPPHMMSNMHPPLPPGQQHMIRMSGPMGHMPNSIPP 470 +P Q PH Q +P NM PPG Q R GP G M PP Sbjct: 597 IPQGFQQPHPSQQMP----MNMAQMGPPGPQGQFRPPGPQGQMGPQGPP 641 Score = 30.0 bits (66), Expect = 3.1 Identities = 21/51 (41%), Positives = 23/51 (45%), Gaps = 1/51 (1%) Frame = +3 Query: 321 PMPYHVQPPHHMQGVP-PHMMSNMHPPLPPGQQHMIRMSGPMGHMPNSIPP 470 P P + P MQ P PH + P PPG Q SGP GHM PP Sbjct: 666 PRPQDMHGPQGMQRHPGPH--GPLGPQGPPGPQGS---SGPQGHMGPQGPP 711
>ROBO4_MOUSE (Q8C310) Roundabout homolog 4 precursor| Length = 1012 Score = 32.0 bits (71), Expect = 0.82 Identities = 15/35 (42%), Positives = 22/35 (62%) Frame = +2 Query: 269 PASPTTFLGQCSPIYTQSNALSCPTPSSYARSSTA 373 PA+P + L P Q++ LSCP+PSS SS++ Sbjct: 754 PAAPLSVLNSSRPSSPQASFLSCPSPSSSNLSSSS 788
>RBBP6_MOUSE (P97868) Retinoblastoma-binding protein 6 (p53-associated cellular| protein of testis) (Proliferation potential-related protein) (Protein P2P-R) Length = 1790 Score = 32.0 bits (71), Expect = 0.82 Identities = 25/65 (38%), Positives = 25/65 (38%), Gaps = 4/65 (6%) Frame = +3 Query: 288 SLVNVPRFTPNPMPYHVQPPHHM----QGVPPHMMSNMHPPLPPGQQHMIRMSGPMGHMP 455 SL P F P P P PP H GVPP S P PPGQ S P P Sbjct: 550 SLPATPVFVPVPPPPLYPPPPHTLPLPPGVPPPQFS---PQFPPGQPPPAGYSVP----P 602 Query: 456 NSIPP 470 PP Sbjct: 603 PGFPP 607
>RENT1_ARATH (Q9FJR0) Regulator of nonsense transcripts 1 homolog (EC 3.6.1.-)| (ATP-dependent helicase UPF1) Length = 1254 Score = 31.6 bits (70), Expect = 1.1 Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 1/55 (1%) Frame = +3 Query: 309 FTPNPMPYHVQPPHHMQGVP-PHMMSNMHPPLPPGQQHMIRMSGPMGHMPNSIPP 470 + P+ P +P H G P P + + P PP Q + I GP+G +P++ P Sbjct: 979 YLPSGPPNGARPGLHPAGYPIPRVPLSPFPGGPPSQPYAIPTRGPVGAVPHAPQP 1033
>EMS_DROME (P18488) Homeotic protein empty spiracles| Length = 497 Score = 31.6 bits (70), Expect = 1.1 Identities = 17/57 (29%), Positives = 23/57 (40%), Gaps = 5/57 (8%) Frame = +3 Query: 297 NVPRFTPNPMPYHV-----QPPHHMQGVPPHMMSNMHPPLPPGQQHMIRMSGPMGHM 452 NVP P P + PPHH+ P H + HP QQ ++ P H+ Sbjct: 59 NVPGSPPQTPPATLTLIPGSPPHHLMAPPAHGLPYPHPHAQQQQQQHLQAPHPHPHL 115
>BRD4_HUMAN (O60885) Bromodomain-containing protein 4 (HUNK1 protein)| Length = 1362 Score = 31.6 bits (70), Expect = 1.1 Identities = 17/52 (32%), Positives = 21/52 (40%) Frame = +3 Query: 315 PNPMPYHVQPPHHMQGVPPHMMSNMHPPLPPGQQHMIRMSGPMGHMPNSIPP 470 P P+P PP PP PP PP M + + P M +S PP Sbjct: 750 PAPVPQQPPPPPQQPPPPPPPQQQQQPPPPPPPPSMPQQAAPA--MKSSPPP 799
>CBPY_SCHPO (O13849) Carboxypeptidase Y precursor (EC 3.4.16.5) (CPY)| Length = 1002 Score = 31.6 bits (70), Expect = 1.1 Identities = 16/44 (36%), Positives = 19/44 (43%), Gaps = 1/44 (2%) Frame = +3 Query: 321 PMPYHVQPPHHMQGVPPHMMSNMHPPLPPGQQHMI-RMSGPMGH 449 P P H +P HM P H H P PP + H + GP H Sbjct: 313 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPFKHHELEEHEGPEHH 356 Score = 30.0 bits (66), Expect = 3.1 Identities = 20/55 (36%), Positives = 23/55 (41%), Gaps = 5/55 (9%) Frame = +3 Query: 321 PMPYHVQPPHHMQGVPPHMMSNMHPPLPPGQ----QHMIRMSGPMGHMPNS-IPP 470 P P H +P HM P H H P PP +HM PM H P +PP Sbjct: 287 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHM--PPPPMHHEPGEHMPP 339 Score = 30.0 bits (66), Expect = 3.1 Identities = 20/55 (36%), Positives = 23/55 (41%), Gaps = 5/55 (9%) Frame = +3 Query: 321 PMPYHVQPPHHMQGVPPHMMSNMHPPLPPGQ----QHMIRMSGPMGHMPNS-IPP 470 P P H +P HM P H H P PP +HM PM H P +PP Sbjct: 274 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHM--PPPPMHHEPGEHMPP 326 Score = 30.0 bits (66), Expect = 3.1 Identities = 20/55 (36%), Positives = 23/55 (41%), Gaps = 5/55 (9%) Frame = +3 Query: 321 PMPYHVQPPHHMQGVPPHMMSNMHPPLPPGQ----QHMIRMSGPMGHMPNS-IPP 470 P P H +P HM P H H P PP +HM PM H P +PP Sbjct: 261 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHM--PPPPMHHEPGEHMPP 313 Score = 30.0 bits (66), Expect = 3.1 Identities = 20/55 (36%), Positives = 23/55 (41%), Gaps = 5/55 (9%) Frame = +3 Query: 321 PMPYHVQPPHHMQGVPPHMMSNMHPPLPPGQ----QHMIRMSGPMGHMPNS-IPP 470 P P H +P HM P H H P PP +HM PM H P +PP Sbjct: 248 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHM--PPPPMHHEPGEHMPP 300 Score = 30.0 bits (66), Expect = 3.1 Identities = 20/55 (36%), Positives = 23/55 (41%), Gaps = 5/55 (9%) Frame = +3 Query: 321 PMPYHVQPPHHMQGVPPHMMSNMHPPLPPGQ----QHMIRMSGPMGHMPNS-IPP 470 P P H +P HM P H H P PP +HM PM H P +PP Sbjct: 235 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHM--PPPPMHHEPGEHMPP 287 Score = 30.0 bits (66), Expect = 3.1 Identities = 20/55 (36%), Positives = 23/55 (41%), Gaps = 5/55 (9%) Frame = +3 Query: 321 PMPYHVQPPHHMQGVPPHMMSNMHPPLPPGQ----QHMIRMSGPMGHMPNS-IPP 470 P P H +P HM P H H P PP +HM PM H P +PP Sbjct: 222 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHM--PPPPMHHEPGEHMPP 274 Score = 29.6 bits (65), Expect = 4.1 Identities = 20/55 (36%), Positives = 23/55 (41%), Gaps = 5/55 (9%) Frame = +3 Query: 321 PMPYHVQPPHHMQGVPPHMMSNMHPPLPPGQ----QHMIRMSGPMGHMPNS-IPP 470 P P H +P HM P H H P PP +HM PM H P +PP Sbjct: 209 PPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHM--PPPPMHHEPGEHMPP 261
>ZN207_HUMAN (O43670) Zinc finger protein 207| Length = 478 Score = 31.2 bits (69), Expect = 1.4 Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 5/63 (7%) Frame = +3 Query: 297 NVPRFTPNPMPYHVQPPHHMQGVPPHM-----MSNMHPPLPPGQQHMIRMSGPMGHMPNS 461 N+PR P P P + G+ P M PP+PP Q+ G G++P + Sbjct: 385 NLPR--PGQAPIGNPPVGPIGGMMPPQPGIPQQQGMRPPMPPHGQYGGHHQGMPGYLPGA 442 Query: 462 IPP 470 +PP Sbjct: 443 MPP 445
>RSMB_CHICK (Q9PV94) Small nuclear ribonucleoprotein-associated protein B'| (snRNP-B') (Sm protein B') (Sm-B') (SmB') (snRPB') Length = 240 Score = 31.2 bits (69), Expect = 1.4 Identities = 20/54 (37%), Positives = 23/54 (42%), Gaps = 2/54 (3%) Frame = +3 Query: 315 PNPMPYHVQPPHHMQGVPPHMMSNMHPP--LPPGQQHMIRMSGPMGHMPNSIPP 470 P P PP M G PP M M PP +PPG+ PMG P + P Sbjct: 175 PPPPMSRGAPPPGMMGPPPGMRPPMGPPMGMPPGR------GAPMGMPPPGMRP 222
>BRD4_MOUSE (Q9ESU6) Bromodomain-containing protein 4 (Mitotic| chromosome-associated protein) (MCAP) Length = 1400 Score = 31.2 bits (69), Expect = 1.4 Identities = 20/59 (33%), Positives = 24/59 (40%), Gaps = 3/59 (5%) Frame = +3 Query: 303 PRFTPNPMPYHVQPPHHMQ---GVPPHMMSNMHPPLPPGQQHMIRMSGPMGHMPNSIPP 470 P+ P P P QPP Q PP PP PP M + + P M +S PP Sbjct: 745 PQMQPAPAPVPQQPPPPPQQPPPPPPPQQQQQQPPPPPPPPSMPQQTAPA--MKSSPPP 801 Score = 30.8 bits (68), Expect = 1.8 Identities = 18/52 (34%), Positives = 21/52 (40%) Frame = +3 Query: 315 PNPMPYHVQPPHHMQGVPPHMMSNMHPPLPPGQQHMIRMSGPMGHMPNSIPP 470 P P P QPP Q PP +H P P H+ + P G P PP Sbjct: 978 PPPPPPQPQPPPQQQHQPP--PRPVHLPSMPFSAHIQQPPPPPGQQPTHPPP 1027
>NCOA6_RAT (Q9JLI4) Nuclear receptor coactivator 6 (Amplified in breast cancer| protein 3) (Cancer-amplified transcriptional coactivator ASC-2) (Activating signal cointegrator 2) (ASC-2) (Peroxisome proliferator-activated receptor-interacting protein) (PPA Length = 418 Score = 31.2 bits (69), Expect = 1.4 Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 2/58 (3%) Frame = +3 Query: 300 VPRFTPNPMPYHVQPPHH--MQGVPPHMMSNMHPPLPPGQQHMIRMSGPMGHMPNSIP 467 +P F+ P Y QP +Q +PP +M ++ PP P QQ P +P P Sbjct: 250 LPDFSNRPPGYPTQPVEQRPLQQMPPQLMQHVAPPPQPPQQQ------PQPQLPQQQP 301
>RSMB_MOUSE (P27048) Small nuclear ribonucleoprotein-associated protein B| (snRNP-B) (Sm protein B) (Sm-B) (SmB) Length = 231 Score = 30.8 bits (68), Expect = 1.8 Identities = 21/54 (38%), Positives = 23/54 (42%), Gaps = 2/54 (3%) Frame = +3 Query: 315 PNPMPYHVQPPHHMQGVPPHMMSNMHPP--LPPGQQHMIRMSGPMGHMPNSIPP 470 P P PP M G PP M M PP LPPG+ PMG P + P Sbjct: 175 PPPPMGRGAPPPGMMGPPPGMRPPMGPPMGLPPGR------GTPMGMPPPGMRP 222
>SYN1_BOVIN (P17599) Synapsin-1 (Synapsin I)| Length = 706 Score = 30.8 bits (68), Expect = 1.8 Identities = 17/45 (37%), Positives = 19/45 (42%), Gaps = 1/45 (2%) Frame = +3 Query: 339 QPPHHMQGVPPHMMSNMHPPL-PPGQQHMIRMSGPMGHMPNSIPP 470 Q P GVPP PP PPG R + G MP + PP Sbjct: 572 QAPPKASGVPPGGQQRQGPPQKPPGPAGPTRQASQAGPMPRTGPP 616
>SRC8_CHICK (Q01406) Src substrate protein p85 (p80) (Cortactin)| Length = 563 Score = 30.8 bits (68), Expect = 1.8 Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 4/56 (7%) Frame = +2 Query: 269 PASPTTFLGQ----CSPIYTQSNALSCPTPSSYARSSTAYDVQYASTSATRSTAHD 424 P SPTT + SP+Y +A+S S+Y SST Y ++ S ++T D Sbjct: 412 PPSPTTQPAEPKTPSSPVY--QDAVSYDAESAYKNSSTTYSAEHEPESGYKTTGSD 465
>CREA_GIBFU (O94131) DNA-binding protein creA (Carbon catabolite repressor)| Length = 420 Score = 30.8 bits (68), Expect = 1.8 Identities = 15/41 (36%), Positives = 19/41 (46%) Frame = +3 Query: 348 HHMQGVPPHMMSNMHPPLPPGQQHMIRMSGPMGHMPNSIPP 470 H QG+PPHMM + PP + + G PN PP Sbjct: 139 HQQQGLPPHMMPDGMMAPPPAPKTIRSAPGSALASPNVSPP 179
>VID21_GIBZE (Q4IB96) Chromatin modification-related protein VID21| Length = 1629 Score = 30.8 bits (68), Expect = 1.8 Identities = 20/55 (36%), Positives = 21/55 (38%), Gaps = 6/55 (10%) Frame = +3 Query: 324 MPYHVQPPHHMQGVPPHMMSNMHPP------LPPGQQHMIRMSGPMGHMPNSIPP 470 MP P M GVP HM S + PP Q M M G MP PP Sbjct: 1311 MPMQSPAPASMGGVPAHMASGLVPPNQMNSVQQAQMQAMQAMQGQHNRMPMPNPP 1365
>NCOA6_HUMAN (Q14686) Nuclear receptor coactivator 6 (Amplified in breast cancer| protein 3) (Cancer-amplified transcriptional coactivator ASC-2) (Activating signal cointegrator 2) (ASC-2) (Peroxisome proliferator-activated receptor-interacting protein) (P Length = 2063 Score = 30.8 bits (68), Expect = 1.8 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 2/41 (4%) Frame = +3 Query: 300 VPRFTPNPMPYHVQPPHH--MQGVPPHMMSNMHPPLPPGQQ 416 +P F+ P Y QP +Q +PP +M ++ PP P QQ Sbjct: 963 LPEFSNRPPGYPSQPVEQRPLQQMPPQLMQHVAPPPQPPQQ 1003
>YNM4_YEAST (P53919) Hypothetical 54.9 kDa protein in SPC98-TOM70 intergenic| region Length = 492 Score = 30.4 bits (67), Expect = 2.4 Identities = 19/51 (37%), Positives = 22/51 (43%), Gaps = 5/51 (9%) Frame = +3 Query: 318 NPMPYHVQPPHHMQGVPPHMMSNM-----HPPLPPGQQHMIRMSGPMGHMP 455 N +PY PP + PP S M PPLP G M +M PM P Sbjct: 400 NTVPYGSLPPAYNNMSPPTQQSFMPMTQSQPPLPYGVPPMNQMQNPMYIQP 450
>EXTN_DAUCA (P06599) Extensin precursor| Length = 306 Score = 30.4 bits (67), Expect = 2.4 Identities = 15/51 (29%), Positives = 21/51 (41%) Frame = +3 Query: 303 PRFTPNPMPYHVQPPHHMQGVPPHMMSNMHPPLPPGQQHMIRMSGPMGHMP 455 P +P P + PP+H + PP H P PP + + P H P Sbjct: 42 PEHSPPPPEHSPPPPYHYESPPP----PKHSPPPPTPVYKYKSPPPPMHSP 88
>SNRPA_HUMAN (P09012) U1 small nuclear ribonucleoprotein A (U1 snRNP protein A)| (U1A protein) (U1-A) Length = 281 Score = 30.4 bits (67), Expect = 2.4 Identities = 24/55 (43%), Positives = 26/55 (47%), Gaps = 6/55 (10%) Frame = +3 Query: 324 MPYHVQPP---HHMQGVPPHM-MSNMHPP--LPPGQQHMIRMSGPMGHMPNSIPP 470 MP Q P HHM G PP+M M PP L PGQ M P MP +PP Sbjct: 143 MPPMTQAPRIMHHMPGQPPYMPPPGMIPPPGLAPGQIPPGAMP-PQQLMPGQMPP 196
>EXTN2_ARATH (Q9M1G9) Extensin-2 precursor (AtExt2) (Cell wall| hydroxyproline-rich glycoprotein 1) (HRGP1) Length = 743 Score = 30.4 bits (67), Expect = 2.4 Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 1/57 (1%) Frame = +3 Query: 303 PRFTPNPMPYHVQPPH-HMQGVPPHMMSNMHPPLPPGQQHMIRMSGPMGHMPNSIPP 470 P ++P+P Y+ PPH H+ PP PP ++ S P ++ NS PP Sbjct: 649 PYYSPSPKVYYKSPPHPHVCVCPP------PPPCYSPSPKVVYKSPPPPYVYNSPPP 699 Score = 30.0 bits (66), Expect = 3.1 Identities = 16/56 (28%), Positives = 27/56 (48%) Frame = +3 Query: 303 PRFTPNPMPYHVQPPHHMQGVPPHMMSNMHPPLPPGQQHMIRMSGPMGHMPNSIPP 470 P ++P+P Y+ PP PP++ S+ PP + S P ++ +S PP Sbjct: 408 PTYSPSPKVYYKSPP------PPYVYSSPPPPYYSPSPKVYYKSPPPPYVYSSPPP 457 Score = 29.6 bits (65), Expect = 4.1 Identities = 16/56 (28%), Positives = 27/56 (48%) Frame = +3 Query: 303 PRFTPNPMPYHVQPPHHMQGVPPHMMSNMHPPLPPGQQHMIRMSGPMGHMPNSIPP 470 P ++P+P Y+ PP PP++ S+ PP + S P ++ +S PP Sbjct: 583 PYYSPSPKVYYKSPP------PPYVYSSPPPPYYSPSPKVYYKSPPPPYVYSSPPP 632 Score = 29.6 bits (65), Expect = 4.1 Identities = 16/56 (28%), Positives = 27/56 (48%) Frame = +3 Query: 303 PRFTPNPMPYHVQPPHHMQGVPPHMMSNMHPPLPPGQQHMIRMSGPMGHMPNSIPP 470 P ++P+P Y+ PP PP++ S+ PP + S P ++ +S PP Sbjct: 483 PYYSPSPKVYYKSPP------PPYVYSSPPPPYYSPSPKVYYKSPPPPYVYSSPPP 532 Score = 29.6 bits (65), Expect = 4.1 Identities = 16/56 (28%), Positives = 27/56 (48%) Frame = +3 Query: 303 PRFTPNPMPYHVQPPHHMQGVPPHMMSNMHPPLPPGQQHMIRMSGPMGHMPNSIPP 470 P ++P+P Y+ PP PP++ S+ PP + S P ++ +S PP Sbjct: 458 PYYSPSPKVYYKSPP------PPYVYSSPPPPYYSPSPKVYYKSPPPPYVYSSPPP 507 Score = 28.9 bits (63), Expect = 6.9 Identities = 16/56 (28%), Positives = 27/56 (48%) Frame = +3 Query: 303 PRFTPNPMPYHVQPPHHMQGVPPHMMSNMHPPLPPGQQHMIRMSGPMGHMPNSIPP 470 P ++P+P ++ PP PP++ S+ PP + S P ++ NS PP Sbjct: 533 PYYSPSPKVHYKSPP------PPYVYSSPPPPYYSPSPKVHYKSPPPPYVYNSPPP 582 Score = 28.9 bits (63), Expect = 6.9 Identities = 16/56 (28%), Positives = 27/56 (48%) Frame = +3 Query: 303 PRFTPNPMPYHVQPPHHMQGVPPHMMSNMHPPLPPGQQHMIRMSGPMGHMPNSIPP 470 P ++P+P Y+ PP PP++ S+ PP + S P ++ +S PP Sbjct: 508 PYYSPSPKVYYKSPP------PPYVYSSPPPPYYSPSPKVHYKSPPPPYVYSSPPP 557
>AB1IP_XENLA (Q6DCV1) Amyloid beta A4 precursor protein-binding family B member| 1-interacting protein (APBB1-interacting protein 1) Length = 653 Score = 30.0 bits (66), Expect = 3.1 Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 2/56 (3%) Frame = +3 Query: 309 FTPNPMP-YHVQPPHHMQGVPPHMMSNM-HPPLPPGQQHMIRMSGPMGHMPNSIPP 470 F P P P + PP + PP MSN +PP PP Q ++MS P PP Sbjct: 541 FLPPPPPDFFDAPPDFLPPSPPSFMSNAENPPPPPVTQ--LQMSNAPAPPPPPPPP 594 Score = 28.5 bits (62), Expect = 9.1 Identities = 19/53 (35%), Positives = 24/53 (45%) Frame = +3 Query: 285 LSLVNVPRFTPNPMPYHVQPPHHMQGVPPHMMSNMHPPLPPGQQHMIRMSGPM 443 L + N P P P PP VPP + HPP PP +Q ++ GPM Sbjct: 579 LQMSNAPAPPPPP-----PPPAPAANVPP-LPVKKHPPKPPKRQSIV---GPM 622
>RSMB_RAT (P17136) Small nuclear ribonucleoprotein-associated protein B| (snRNP-B) (Sm protein B) (Sm-B) (SmB) (SM11) (Fragment) Length = 214 Score = 30.0 bits (66), Expect = 3.1 Identities = 20/54 (37%), Positives = 23/54 (42%), Gaps = 2/54 (3%) Frame = +3 Query: 315 PNPMPYHVQPPHHMQGVPPHMMSNMHPP--LPPGQQHMIRMSGPMGHMPNSIPP 470 P P PP M G PP M M PP +PPG+ PMG P + P Sbjct: 158 PPPPMGRGAPPPGMMGPPPGMRPPMGPPMGIPPGR------GTPMGMPPPGMRP 205
>PALI_YARLI (Q7Z8R5) pH-response regulator protein palI/RIM9| Length = 728 Score = 30.0 bits (66), Expect = 3.1 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 4/40 (10%) Frame = +3 Query: 306 RFTPNPMPYHV----QPPHHMQGVPPHMMSNMHPPLPPGQ 413 R+ P+P Y +PP+ +GVPP SN P PPGQ Sbjct: 294 RYGPSPDRYDQGGPGRPPNGSRGVPPRRPSN--GPTPPGQ 331
>BRM_DROME (P25439) Homeotic gene regulator (EC 3.6.1.-) (ATP-dependent| helicase brm) (Protein brahma) Length = 1638 Score = 30.0 bits (66), Expect = 3.1 Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 16/68 (23%) Frame = +3 Query: 315 PNP-MPYHVQPPHHMQGVPP------------HMMSNMHPP---LPPGQQHMIRMSGPMG 446 P+P PY Q P +QG PP H PP +PP Q MI GP Sbjct: 29 PSPHSPYPHQQPGPLQGPPPPGHPGAYGHPMQHGPPGQGPPGHHMPPHHQGMIFSKGP-- 86 Query: 447 HMPNSIPP 470 HM +PP Sbjct: 87 HMGMQMPP 94
>RSMB_HUMAN (P14678) Small nuclear ribonucleoprotein-associated proteins B and| B' (snRNP-B) (Sm protein B/B') (Sm-B/Sm-B') (SmB/SmB') Length = 240 Score = 30.0 bits (66), Expect = 3.1 Identities = 20/54 (37%), Positives = 23/54 (42%), Gaps = 2/54 (3%) Frame = +3 Query: 315 PNPMPYHVQPPHHMQGVPPHMMSNMHPP--LPPGQQHMIRMSGPMGHMPNSIPP 470 P P PP M G PP M M PP +PPG+ PMG P + P Sbjct: 175 PPPPMGRGAPPPGMMGPPPGMRPPMGPPMGIPPGR------GTPMGMPPPGMRP 222
>RSMB_ERIEU (Q9TU67) Small nuclear ribonucleoprotein-associated protein B'| (snRNP-B') (Sm protein B') (Sm-B') (SmB') (snRPB') Length = 240 Score = 30.0 bits (66), Expect = 3.1 Identities = 20/54 (37%), Positives = 23/54 (42%), Gaps = 2/54 (3%) Frame = +3 Query: 315 PNPMPYHVQPPHHMQGVPPHMMSNMHPP--LPPGQQHMIRMSGPMGHMPNSIPP 470 P P PP M G PP M M PP +PPG+ PMG P + P Sbjct: 175 PPPPMGRGAPPPGMMGPPPGMRPPMGPPMGIPPGR------GTPMGMPPPGMRP 222
>HXA3_MOUSE (P02831) Homeobox protein Hox-A3 (Hox-1.5) (MO-10)| Length = 443 Score = 29.6 bits (65), Expect = 4.1 Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 4/57 (7%) Frame = +3 Query: 288 SLVNVPRFTPNPMPYHVQPPHHMQGVPPHM----MSNMHPPLPPGQQHMIRMSGPMG 446 SLVN + P P +PP G+PP + + PP PP +++ SG G Sbjct: 283 SLVNSVPYEPQSPPPFSKPPQGAYGLPPASYPAPLPSCAPPPPPQKRYTAAGSGAGG 339
>RU1C_MOUSE (Q62241) U1 small nuclear ribonucleoprotein C (U1 snRNP protein C)| (U1C protein) (U1-C) Length = 159 Score = 29.6 bits (65), Expect = 4.1 Identities = 21/61 (34%), Positives = 26/61 (42%) Frame = +3 Query: 288 SLVNVPRFTPNPMPYHVQPPHHMQGVPPHMMSNMHPPLPPGQQHMIRMSGPMGHMPNSIP 467 +++ P P P + P HM G P MM M PP PPG P+G P P Sbjct: 75 AMIPPPPSLPGPPRPGMMPAPHMGG--PPMMPMMGPP-PPGMM-------PVGPAPGMRP 124 Query: 468 P 470 P Sbjct: 125 P 125
>RU1C_HUMAN (P09234) U1 small nuclear ribonucleoprotein C (U1 snRNP protein C)| (U1C protein) (U1-C) Length = 159 Score = 29.6 bits (65), Expect = 4.1 Identities = 21/61 (34%), Positives = 26/61 (42%) Frame = +3 Query: 288 SLVNVPRFTPNPMPYHVQPPHHMQGVPPHMMSNMHPPLPPGQQHMIRMSGPMGHMPNSIP 467 +++ P P P + P HM G P MM M PP PPG P+G P P Sbjct: 75 AMIPPPPSLPGPPRPGMMPAPHMGG--PPMMPMMGPP-PPGMM-------PVGPAPGMRP 124 Query: 468 P 470 P Sbjct: 125 P 125
>GLU2_MAIZE (P04706) Glutelin-2 precursor (Zein-gamma) (27 kDa zein)| (Alcohol-soluble reduced glutelin) (ASG) (Zein ZC2) Length = 223 Score = 29.6 bits (65), Expect = 4.1 Identities = 17/58 (29%), Positives = 25/58 (43%) Frame = +3 Query: 294 VNVPRFTPNPMPYHVQPPHHMQGVPPHMMSNMHPPLPPGQQHMIRMSGPMGHMPNSIP 467 V++P P P H+ PP H+ P H+ +H P P + + P H P P Sbjct: 34 VHLPPPVHLPPPVHLPPPVHLP-PPVHLPPPVHLPPPVHVPPPVHLPPPPCHYPTQPP 90 Score = 29.3 bits (64), Expect = 5.3 Identities = 15/42 (35%), Positives = 19/42 (45%) Frame = +3 Query: 294 VNVPRFTPNPMPYHVQPPHHMQGVPPHMMSNMHPPLPPGQQH 419 V++P P P HV PP H+ P H + P P Q H Sbjct: 58 VHLPPPVHLPPPVHVPPPVHLPPPPCHYPTQPPRPQPHPQPH 99
>ZC3H6_HUMAN (P61129) Zinc finger CCCH-type domain-containing protein 6| Length = 1189 Score = 29.6 bits (65), Expect = 4.1 Identities = 13/43 (30%), Positives = 21/43 (48%) Frame = +3 Query: 297 NVPRFTPNPMPYHVQPPHHMQGVPPHMMSNMHPPLPPGQQHMI 425 N+ + +P+ + P HH PP + PPLPPG ++ Sbjct: 484 NMSQGHSSPVMHPGSPGHHPCAGPPGLPVPQSPPLPPGPPEIV 526
>FOXJ3_MOUSE (Q8BUR3) Forkhead box protein J3| Length = 623 Score = 29.6 bits (65), Expect = 4.1 Identities = 15/39 (38%), Positives = 18/39 (46%) Frame = +3 Query: 303 PRFTPNPMPYHVQPPHHMQGVPPHMMSNMHPPLPPGQQH 419 P+ P P P+ PH G+P H H P P QQH Sbjct: 374 PQMHPQPSPH---TPHRPHGLPQHPQRPQH-PAPHPQQH 408
>SYN1_CANFA (O62732) Synapsin-1 (Synapsin I) (Fragment)| Length = 415 Score = 29.6 bits (65), Expect = 4.1 Identities = 16/45 (35%), Positives = 18/45 (40%), Gaps = 1/45 (2%) Frame = +3 Query: 339 QPPHHMQGVPPHMMSNMHPPL-PPGQQHMIRMSGPMGHMPNSIPP 470 Q P G PP PP PPG R + G MP + PP Sbjct: 300 QAPPKASGAPPSGQQRQGPPQKPPGPAGPTRQASQAGPMPRTGPP 344
>SF3B2_HUMAN (Q13435) Splicing factor 3B subunit 2 (Spliceosome-associated| protein 145) (SAP 145) (SF3b150) (Pre-mRNA splicing factor SF3b 145 kDa subunit) Length = 872 Score = 29.6 bits (65), Expect = 4.1 Identities = 20/50 (40%), Positives = 23/50 (46%) Frame = +3 Query: 321 PMPYHVQPPHHMQGVPPHMMSNMHPPLPPGQQHMIRMSGPMGHMPNSIPP 470 PMP PP G+PP PP PPG + + PM H PN PP Sbjct: 68 PMP---PPP---LGLPPLQPPPPPPPPPPG----LGLGFPMAHPPNLGPP 107
>NOTC1_RAT (Q07008) Neurogenic locus notch homolog protein 1 precursor (Notch 1)| [Contains: Notch 1 extracellular truncation; Notch 1 intracellular domain] Length = 2531 Score = 29.6 bits (65), Expect = 4.1 Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 6/63 (9%) Frame = +3 Query: 288 SLVNVPRFTPNPMPYHVQPPHHMQGVPPHMMSNMHPP------LPPGQQHMIRMSGPMGH 449 S +V P+ +P H P Q +P + S+M PP L P QH S P+ + Sbjct: 2414 SQADVQPLGPSSLPVHTILPQESQALPTSLPSSMVPPMTTTQFLTPPSQHSY-SSSPVDN 2472 Query: 450 MPN 458 P+ Sbjct: 2473 TPS 2475
>NOTC1_MOUSE (Q01705) Neurogenic locus notch homolog protein 1 precursor (Notch 1)| (Motch A) (mT14) (p300) [Contains: Notch 1 extracellular truncation; Notch 1 intracellular domain] Length = 2531 Score = 29.6 bits (65), Expect = 4.1 Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 6/63 (9%) Frame = +3 Query: 288 SLVNVPRFTPNPMPYHVQPPHHMQGVPPHMMSNMHPP------LPPGQQHMIRMSGPMGH 449 S +V P+ +P H P Q +P + S+M PP L P QH S P+ + Sbjct: 2414 SQADVQPLGPSSLPVHTILPQESQALPTSLPSSMVPPMTTTQFLTPPSQHSY-SSSPVDN 2472 Query: 450 MPN 458 P+ Sbjct: 2473 TPS 2475
>PO6F2_MOUSE (Q8BJI4) POU domain, class 6, transcription factor 2| Length = 691 Score = 29.6 bits (65), Expect = 4.1 Identities = 17/55 (30%), Positives = 21/55 (38%), Gaps = 4/55 (7%) Frame = +3 Query: 315 PNPMPYHVQP----PHHMQGVPPHMMSNMHPPLPPGQQHMIRMSGPMGHMPNSIP 467 P P H QP P Q PPH LP + + + P H P+S P Sbjct: 201 PPPTSQHPQPASQAPPQSQPTPPHQPPPASQQLPAPPAQLEQATQPQQHQPHSHP 255
>BRO1_YARLI (Q6CGJ5) Vacuolar protein-sorting protein BRO1 (BRO| domain-containing protein 1) Length = 867 Score = 29.6 bits (65), Expect = 4.1 Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 2/35 (5%) Frame = +3 Query: 309 FTPNPMPYHVQPPHHMQ-GVPP-HMMSNMHPPLPP 407 + PN P+ QPP H Q G PP H +PP PP Sbjct: 821 YGPNS-PFMQQPPQHQQYGQPPHHQQYGQNPPPPP 854
>HNRL1_MOUSE (Q8VDM6) Heterogeneous nuclear ribonucleoprotein U-like protein 1| Length = 859 Score = 29.3 bits (64), Expect = 5.3 Identities = 20/61 (32%), Positives = 27/61 (44%) Frame = +3 Query: 288 SLVNVPRFTPNPMPYHVQPPHHMQGVPPHMMSNMHPPLPPGQQHMIRMSGPMGHMPNSIP 467 S V +TP P P + QPP++ QG + PP PP + GP P + P Sbjct: 746 STPTVSSYTP-PQPSYSQPPYN-QGGYTQGYTAPPPPPPPPPAYNYGSYGPYNPAPYTPP 803 Query: 468 P 470 P Sbjct: 804 P 804
>WASIP_HUMAN (O43516) Wiskott-Aldrich syndrome protein-interacting protein| (WASP-interacting protein) (PRPL-2 protein) Length = 503 Score = 29.3 bits (64), Expect = 5.3 Identities = 16/51 (31%), Positives = 20/51 (39%) Frame = +3 Query: 315 PNPMPYHVQPPHHMQGVPPHMMSNMHPPLPPGQQHMIRMSGPMGHMPNSIP 467 P P P +P H + VPP N PP+P + P P S P Sbjct: 266 PPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPSRP 316
>ENAM_MOUSE (O55196) Enamelin precursor| Length = 1274 Score = 29.3 bits (64), Expect = 5.3 Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 5/62 (8%) Frame = +3 Query: 288 SLVNVPRFTP-----NPMPYHVQPPHHMQGVPPHMMSNMHPPLPPGQQHMIRMSGPMGHM 452 + +N P P N MP PPH PP+ M PP+P G Q PM + Sbjct: 65 NFMNAPPMMPMGPYGNGMP---MPPHMPPQYPPYQMPMWPPPVPNGWQ-----QPPMPNF 116 Query: 453 PN 458 P+ Sbjct: 117 PS 118
>EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline-rich| glycoprotein) Length = 620 Score = 29.3 bits (64), Expect = 5.3 Identities = 14/56 (25%), Positives = 20/56 (35%) Frame = +3 Query: 303 PRFTPNPMPYHVQPPHHMQGVPPHMMSNMHPPLPPGQQHMIRMSGPMGHMPNSIPP 470 P ++P P Y PP + PP + + P P I + P P P Sbjct: 470 PTYSPPPPAYSPPPPSPIYSPPPPQVQPLPPTFSPPPPRRIHLPPPPHRQPRPPTP 525
>DAAM2_MOUSE (Q80U19) Disheveled-associated activator of morphogenesis 2| Length = 1068 Score = 29.3 bits (64), Expect = 5.3 Identities = 16/49 (32%), Positives = 20/49 (40%) Frame = +3 Query: 315 PNPMPYHVQPPHHMQGVPPHMMSNMHPPLPPGQQHMIRMSGPMGHMPNS 461 P P+P+ PP +PP PP+PPG P H P S Sbjct: 544 PPPLPFDSCPPPPAPPLPPG-----GPPIPPGAPPCFSSGPPPSHDPFS 587
>CCNK_MOUSE (O88874) Cyclin-K| Length = 554 Score = 29.3 bits (64), Expect = 5.3 Identities = 19/54 (35%), Positives = 22/54 (40%), Gaps = 3/54 (5%) Frame = +3 Query: 303 PRFTPNPM---PYHVQPPHHMQGVPPHMMSNMHPPLPPGQQHMIRMSGPMGHMP 455 P F P P P H PPH G+ S P +PPG Q + P MP Sbjct: 489 PNFPPPPPRLPPTHAVPPHPPPGLGLPPASYPPPAVPPGGQPPVPPPIPPPGMP 542
>EXTN_SORBI (P24152) Extensin precursor (Proline-rich glycoprotein)| Length = 283 Score = 29.3 bits (64), Expect = 5.3 Identities = 18/70 (25%), Positives = 24/70 (34%), Gaps = 14/70 (20%) Frame = +3 Query: 303 PRFTPNPMPYHVQPPHHMQGVPPHMMSNMHPPLPPGQQHMIR--------------MSGP 440 P +TP P P +PP P H H P P + + P Sbjct: 210 PTYTPTPKPPATKPP---TSTPTHPKPTPHTPYPQAHPPTYKPAPKPSPPAPTPPTYTPP 266 Query: 441 MGHMPNSIPP 470 + H P+S PP Sbjct: 267 VSHTPSSPPP 276 Score = 29.3 bits (64), Expect = 5.3 Identities = 18/61 (29%), Positives = 24/61 (39%), Gaps = 5/61 (8%) Frame = +3 Query: 303 PRFTPNPMPYHVQPPHHMQGVPPHMMSNMHP-----PLPPGQQHMIRMSGPMGHMPNSIP 467 P +TP+P P +PP + PP P P PP + P + PN P Sbjct: 115 PTYTPSPKPPATKPPTYPTPKPPATKPPTPPVYTPSPKPPVTKPPTPKPTPPVYTPNPKP 174 Query: 468 P 470 P Sbjct: 175 P 175 Score = 28.9 bits (63), Expect = 6.9 Identities = 18/63 (28%), Positives = 23/63 (36%), Gaps = 8/63 (12%) Frame = +3 Query: 303 PRFTPNPMPYHVQPPHH--------MQGVPPHMMSNMHPPLPPGQQHMIRMSGPMGHMPN 458 P +TPNP P +PP H + PP + PP P + P P Sbjct: 166 PVYTPNPKPPVTKPPTHTPSPKPPTSKPTPPVYTPSPKPPKPSPPTYTPTPKPPATKPPT 225 Query: 459 SIP 467 S P Sbjct: 226 STP 228
>WASIP_RAT (Q6IN36) Wiskott-Aldrich syndrome protein-interacting protein| (WASP-interacting protein) Length = 487 Score = 29.3 bits (64), Expect = 5.3 Identities = 12/30 (40%), Positives = 15/30 (50%) Frame = +3 Query: 315 PNPMPYHVQPPHHMQGVPPHMMSNMHPPLP 404 P P P +P H + VPP N PP+P Sbjct: 253 PPPPPVGNRPSMHREAVPPPPSQNSKPPVP 282
>RPB1_CAEEL (P16356) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)| Length = 1852 Score = 29.3 bits (64), Expect = 5.3 Identities = 26/97 (26%), Positives = 37/97 (38%), Gaps = 3/97 (3%) Frame = +2 Query: 188 PGNVYXXXXXXXXXXXXXXXPAWHAVTPASPTTFLGQCSPIYTQSNALSCPTPSSYARSS 367 PG VY P + +P SP SP Y+ ++ PT SY+ +S Sbjct: 1572 PG-VYSPSSPQFSMTSPHYSPTSPSYSPTSPAAGQSPVSPSYSPTSPSYSPTSPSYSPTS 1630 Query: 368 TAY---DVQYASTSATRSTAHD*DVRSHGSYAK*YPS 469 +Y Y+ TS + S S SY+ PS Sbjct: 1631 PSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPS 1667
>VND_DROME (P22808) Homeobox protein vnd (Protein ventral nervous system| defective) (Homeobox protein NK-2) Length = 723 Score = 28.9 bits (63), Expect = 6.9 Identities = 14/37 (37%), Positives = 17/37 (45%) Frame = +3 Query: 333 HVQPPHHMQGVPPHMMSNMHPPLPPGQQHMIRMSGPM 443 H PP H Q PH + HP L QQH + P+ Sbjct: 287 HHAPPSHPQQQHPHHQQHHHPHLLLPQQHHQQAVAPL 323
>CSTF2_PONPY (Q5RDA3) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa| subunit) (CF-1 64 kDa subunit) (CstF-64) Length = 577 Score = 28.9 bits (63), Expect = 6.9 Identities = 15/39 (38%), Positives = 18/39 (46%) Frame = +3 Query: 327 PYHVQPPHHMQGVPPHMMSNMHPPLPPGQQHMIRMSGPM 443 P H P H +G PPH + PLP + M GPM Sbjct: 355 PMHHVPGHESRGPPPHELRG--GPLPEPRPLMAEPRGPM 391
>CSTF2_HUMAN (P33240) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa| subunit) (CF-1 64 kDa subunit) (CstF-64) Length = 577 Score = 28.9 bits (63), Expect = 6.9 Identities = 15/39 (38%), Positives = 18/39 (46%) Frame = +3 Query: 327 PYHVQPPHHMQGVPPHMMSNMHPPLPPGQQHMIRMSGPM 443 P H P H +G PPH + PLP + M GPM Sbjct: 355 PMHHVPGHESRGPPPHELRG--GPLPEPRPLMAEPRGPM 391
>DOCK1_HUMAN (Q14185) Dedicator of cytokinesis protein 1 (180 kDa protein| downstream of CRK) (DOCK180) Length = 1865 Score = 28.9 bits (63), Expect = 6.9 Identities = 13/32 (40%), Positives = 17/32 (53%) Frame = +3 Query: 312 TPNPMPYHVQPPHHMQGVPPHMMSNMHPPLPP 407 +P P P PP H + +PP + S PP PP Sbjct: 1823 SPTPPP----PPPHQRHLPPPLPSKTPPPPPP 1850
>ANX11_RABIT (P33477) Annexin A11 (Annexin XI) (Calcyclin-associated annexin 50)| (CAP-50) Length = 503 Score = 28.9 bits (63), Expect = 6.9 Identities = 20/54 (37%), Positives = 23/54 (42%), Gaps = 2/54 (3%) Frame = +3 Query: 315 PNPMPYHVQPPHHMQGVPPHMMSNMHPPLPPGQQHMIRMSG--PMGHMPNSIPP 470 P P P H QPP G P P PPGQQ M G G + ++PP Sbjct: 131 PMPPPGH-QPPGPYPGQLPVTYPGQSPVPPPGQQPMPSYPGYPGSGTVTPAVPP 183
>LCP2_HUMAN (Q13094) Lymphocyte cytosolic protein 2 (SH2 domain-containing| leucocyte protein of 76 kDa) (SLP-76 tyrosine phosphoprotein) (SLP76) Length = 533 Score = 28.9 bits (63), Expect = 6.9 Identities = 17/52 (32%), Positives = 20/52 (38%) Frame = +3 Query: 312 TPNPMPYHVQPPHHMQGVPPHMMSNMHPPLPPGQQHMIRMSGPMGHMPNSIP 467 TP P V P M +PP H PLPP Q + S H +P Sbjct: 182 TPQQPP--VPPQRPMAALPPPPAGRNHSPLPPPQTNHEEPSRSRNHKTAKLP 231
>PRF1_LYCES (Q00451) 36.4 kDa proline-rich protein| Length = 346 Score = 28.9 bits (63), Expect = 6.9 Identities = 18/59 (30%), Positives = 22/59 (37%), Gaps = 3/59 (5%) Frame = +3 Query: 303 PRFTPNPMPYHVQPPH-HMQGVPPHMMSNMH--PPLPPGQQHMIRMSGPMGHMPNSIPP 470 P+ P P QPPH P H H PP P Q ++ H P+ PP Sbjct: 20 PKLPPKVKPPSTQPPHVKPPSTPKHPKDPPHVKPPSTPKQPPYVKPPTTPKHPPHVKPP 78
>WBP11_RAT (Q5PQQ2) WW domain-binding protein 11 (Wbp-11)| Length = 641 Score = 28.9 bits (63), Expect = 6.9 Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 3/55 (5%) Frame = +3 Query: 315 PNPMPYHVQPPHHMQGVPPHMMSNMHPPLPPGQQHMIR---MSGPMGHMPNSIPP 470 P P P + PP PP + + P PPG +R M G G +P +PP Sbjct: 406 PMPGPPPLGPPPAPPLRPPGPPTGLPPGPPPGAPPFLRPPGMPGIRGPLPRLLPP 460
>WBP11_HUMAN (Q9Y2W2) WW domain-binding protein 11 (WBP-11) (SH3 domain-binding| protein SNP70) (Npw38-binding protein) (NpwBP) Length = 641 Score = 28.9 bits (63), Expect = 6.9 Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 3/55 (5%) Frame = +3 Query: 315 PNPMPYHVQPPHHMQGVPPHMMSNMHPPLPPGQQHMIR---MSGPMGHMPNSIPP 470 P P P + PP PP + + P PPG +R M G G +P +PP Sbjct: 406 PMPGPPPLGPPPAPPLRPPGPPTGLPPGPPPGAPPFLRPPGMPGLRGPLPRLLPP 460
>SMAD4_RAT (O70437) Mothers against decapentaplegic homolog 4 (SMAD 4)| (Mothers against DPP homolog 4) (Smad4) Length = 552 Score = 28.9 bits (63), Expect = 6.9 Identities = 14/43 (32%), Positives = 17/43 (39%) Frame = +3 Query: 327 PYHVQPPHHMQGVPPHMMSNMHPPLPPGQQHMIRMSGPMGHMP 455 PY PHH G H HPP+PP H + + P Sbjct: 275 PYTPNLPHHQNGHLQH-----HPPMPPHPGHYWPVHNELAFQP 312
>SMAD4_PIG (Q9GKQ9) Mothers against decapentaplegic homolog 4 (SMAD 4)| (Mothers against DPP homolog 4) (Smad4) Length = 552 Score = 28.9 bits (63), Expect = 6.9 Identities = 14/43 (32%), Positives = 17/43 (39%) Frame = +3 Query: 327 PYHVQPPHHMQGVPPHMMSNMHPPLPPGQQHMIRMSGPMGHMP 455 PY PHH G H HPP+PP H + + P Sbjct: 275 PYPPNLPHHQNGHLQH-----HPPMPPHPGHYWPVHNELAFQP 312
>SMAD4_HUMAN (Q13485) Mothers against decapentaplegic homolog 4 (SMAD 4)| (Mothers against DPP homolog 4) (Deletion target in pancreatic carcinoma 4) (hSMAD4) Length = 552 Score = 28.9 bits (63), Expect = 6.9 Identities = 14/43 (32%), Positives = 17/43 (39%) Frame = +3 Query: 327 PYHVQPPHHMQGVPPHMMSNMHPPLPPGQQHMIRMSGPMGHMP 455 PY PHH G H HPP+PP H + + P Sbjct: 275 PYTPNLPHHQNGHLQH-----HPPMPPHPGHYWPVHNELAFQP 312
>PPSA_ECOLI (P23538) Phosphoenolpyruvate synthase (EC 2.7.9.2) (Pyruvate, water| dikinase) (PEP synthase) Length = 791 Score = 28.9 bits (63), Expect = 6.9 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 3/41 (7%) Frame = +3 Query: 60 DIFGTTEEEVSNAVKAEIE-KKKDEQPKQVIW--DGHSGSI 173 DIF T EEV K ++ +K +P + W DGH+G + Sbjct: 289 DIFSLTNEEVQELAKQAVQIEKHYGRPMDIEWAKDGHTGKL 329
>AKT1_ORYSA (Q8VYX2) Potassium channel AKT1 (OsAKT1)| Length = 935 Score = 28.9 bits (63), Expect = 6.9 Identities = 16/46 (34%), Positives = 29/46 (63%), Gaps = 8/46 (17%) Frame = +1 Query: 49 VLGQIFLEPPRKRFL-----MPSR---QKLKRKRMSSQSRLFGMVT 162 ++G+ EP K + +PSR +KL+RKR++ Q+ LFG+++ Sbjct: 779 LIGRFNSEPMMKNMIHEDADLPSRVLPEKLRRKRVTFQNSLFGVIS 824
>NO75_LUPLU (Q06841) Early nodulin 75 protein (N-75) (NGM-75) (Fragment)| Length = 434 Score = 28.9 bits (63), Expect = 6.9 Identities = 21/64 (32%), Positives = 25/64 (39%), Gaps = 9/64 (14%) Frame = +3 Query: 306 RFTPNPMPYHVQPPHHMQGVPPHMMSNMHPP---------LPPGQQHMIRMSGPMGHMPN 458 R P P H +PP PPH S MH P LPP ++ I + P P Sbjct: 263 RSPPVHPPSHEKPPFVYP--PPHEKSPMHEPPYEKAPPVHLPPHEKPPIEYAPPHEKPPV 320 Query: 459 SIPP 470 PP Sbjct: 321 EYPP 324
>FOR3_SCHPO (O94532) Formin-3| Length = 1461 Score = 28.9 bits (63), Expect = 6.9 Identities = 15/33 (45%), Positives = 16/33 (48%) Frame = +3 Query: 312 TPNPMPYHVQPPHHMQGVPPHMMSNMHPPLPPG 410 TP P P V PP + G PP PP PPG Sbjct: 743 TPAPAPIPVPPPAPIMGGPP------PPPPPPG 769
>FIP1_BRARE (Q5XJD3) Pre-mRNA 3'-end-processing factor FIP1 (FIP1-like 1)| Length = 570 Score = 28.9 bits (63), Expect = 6.9 Identities = 18/56 (32%), Positives = 26/56 (46%) Frame = +3 Query: 303 PRFTPNPMPYHVQPPHHMQGVPPHMMSNMHPPLPPGQQHMIRMSGPMGHMPNSIPP 470 P F P P+P ++ PP + PP + + PPL P + I + P P PP Sbjct: 331 PFFPPGPLPPNIPPPPFL---PPPV--SQAPPLIPPHRMPITVPPPNFPPPTGGPP 381
>SF01_MOUSE (Q64213) Splicing factor 1 (Zinc finger protein 162) (Transcription| factor ZFM1) (mZFM) (Zinc finger gene in MEN1 locus) (Mammalian branch point-binding protein mBBP) (BBP) (CW17) Length = 653 Score = 28.5 bits (62), Expect = 9.1 Identities = 16/50 (32%), Positives = 20/50 (40%), Gaps = 1/50 (2%) Frame = +3 Query: 315 PNPMPYHVQPPHHMQG-VPPHMMSNMHPPLPPGQQHMIRMSGPMGHMPNS 461 P P P QPP G +PP PP PP + S P+ N+ Sbjct: 480 PPPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNT 529
>SET1A_HUMAN (O15047) Histone-lysine N-methyltransferase, H3 lysine-4 specific| SET1 (EC 2.1.1.43) (Set1/Ash2 histone methyltransferase complex subunit SET1) (SET-domain-containing protein 1A) Length = 1707 Score = 28.5 bits (62), Expect = 9.1 Identities = 18/55 (32%), Positives = 23/55 (41%) Frame = +3 Query: 303 PRFTPNPMPYHVQPPHHMQGVPPHMMSNMHPPLPPGQQHMIRMSGPMGHMPNSIP 467 PR P P P V+ P VP + + PLP + R +GP P S P Sbjct: 1081 PREVPVPTPAPVEVP-----VPERVAGSPVTPLPEQEASPARPAGPTEESPPSAP 1130
>RXRB_HUMAN (P28702) Retinoic acid receptor RXR-beta (Retinoid X receptor beta)| Length = 533 Score = 28.5 bits (62), Expect = 9.1 Identities = 19/53 (35%), Positives = 22/53 (41%) Frame = +3 Query: 312 TPNPMPYHVQPPHHMQGVPPHMMSNMHPPLPPGQQHMIRMSGPMGHMPNSIPP 470 +PNP+P V PP PP PPLPP + SG P PP Sbjct: 87 SPNPLPQGVPPPS-----PP------GPPLPPSTAPSLGGSGAPPPPPMPPPP 128
>HXA3_HUMAN (O43365) Homeobox protein Hox-A3 (Hox-1E)| Length = 443 Score = 28.5 bits (62), Expect = 9.1 Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 4/57 (7%) Frame = +3 Query: 288 SLVNVPRFTPNPMPYHVQPPHHMQGVP----PHMMSNMHPPLPPGQQHMIRMSGPMG 446 SLVN + P P +PP G+P P + + PP PP +++ +G G Sbjct: 282 SLVNSVPYEPQSPPPFSKPPQGTYGLPPASYPASLPSCAPPPPPQKRYTAAGAGAGG 338
>SF01_HUMAN (Q15637) Splicing factor 1 (Zinc finger protein 162) (Transcription| factor ZFM1) (Zinc finger gene in MEN1 locus) (Mammalian branch point-binding protein mBBP) (BBP) Length = 639 Score = 28.5 bits (62), Expect = 9.1 Identities = 16/50 (32%), Positives = 20/50 (40%), Gaps = 1/50 (2%) Frame = +3 Query: 315 PNPMPYHVQPPHHMQG-VPPHMMSNMHPPLPPGQQHMIRMSGPMGHMPNS 461 P P P QPP G +PP PP PP + S P+ N+ Sbjct: 480 PPPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNT 529
>PUF4_YEAST (P25339) Protein PUF4| Length = 888 Score = 28.5 bits (62), Expect = 9.1 Identities = 15/54 (27%), Positives = 23/54 (42%), Gaps = 15/54 (27%) Frame = +3 Query: 285 LSLVNVPRFTPNPMPYHVQPPHHMQG---------------VPPHMMSNMHPPL 401 + L+N P P+ P+H+ PP VPPH+++ H PL Sbjct: 414 MDLIN-PNLGPSMQPFHILPPQQNTPPPPWLYSTPPPFNAMVPPHLLAQNHMPL 466
>NCOA6_MOUSE (Q9JL19) Nuclear receptor coactivator 6 (Amplified in breast cancer| protein 3) (Cancer-amplified transcriptional coactivator ASC-2) (Activating signal cointegrator 2) (ASC-2) (Peroxisome proliferator-activated receptor-interacting protein) (P Length = 2067 Score = 28.5 bits (62), Expect = 9.1 Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 2/41 (4%) Frame = +3 Query: 300 VPRFTPNPMPYHVQPPHH--MQGVPPHMMSNMHPPLPPGQQ 416 +P F+ P Y QP + +PP +M ++ PP P QQ Sbjct: 967 LPDFSNRPPGYPTQPVEQRPLPQMPPQLMQHVAPPPQPPQQ 1007
>WASF1_MOUSE (Q8R5H6) Wiskott-Aldrich syndrome protein family member 1| (WASP-family protein member 1) (WAVE-1 protein) Length = 559 Score = 28.5 bits (62), Expect = 9.1 Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 5/54 (9%) Frame = +3 Query: 324 MPYHVQPPHHMQGVPPHMMSNMHPPLPPGQQHMIRMSGP-----MGHMPNSIPP 470 +P H P +QG+PP PP PP IR S P + H P+ + P Sbjct: 410 VPVHPLPQGEVQGLPP------PPPPPPLPPPGIRPSSPVAVAALAHPPSGLHP 457
>WASF1_HUMAN (Q92558) Wiskott-Aldrich syndrome protein family member 1| (WASP-family protein member 1) (WAVE-1 protein) (Verprolin homology domain-containing protein 1) Length = 559 Score = 28.5 bits (62), Expect = 9.1 Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 5/54 (9%) Frame = +3 Query: 324 MPYHVQPPHHMQGVPPHMMSNMHPPLPPGQQHMIRMSGP-----MGHMPNSIPP 470 +P H P +QG+PP PP PP IR S P + H P+ + P Sbjct: 410 VPVHPLPQGEVQGLPP------PPPPPPLPPPGIRPSSPVTVTALAHPPSGLHP 457
>RSMB_MONDO (Q9TU66) Small nuclear ribonucleoprotein-associated protein B'| (snRNP-B') (Sm protein B') (Sm-B') (SmB') (snRPB') Length = 240 Score = 28.5 bits (62), Expect = 9.1 Identities = 19/54 (35%), Positives = 22/54 (40%), Gaps = 2/54 (3%) Frame = +3 Query: 315 PNPMPYHVQPPHHMQGVPPHMMSNMHPP--LPPGQQHMIRMSGPMGHMPNSIPP 470 P P PP M PP M M PP +PPG+ PMG P + P Sbjct: 175 PPPPMGRGAPPPGMMAPPPGMRPPMGPPMGMPPGR------GAPMGMPPPGMRP 222
>MNB_DROME (P49657) Serine/threonine-protein kinase minibrain (EC 2.7.12.1)| Length = 908 Score = 28.5 bits (62), Expect = 9.1 Identities = 16/42 (38%), Positives = 19/42 (45%) Frame = +3 Query: 345 PHHMQGVPPHMMSNMHPPLPPGQQHMIRMSGPMGHMPNSIPP 470 PH M+ PP M PP PP +R+ M PNS P Sbjct: 696 PHAMECDPPQM-----PPPPPNGHGRMRVPAIMQLQPNSYAP 732
>HMEN_ANOGA (O02491) Segmentation polarity homeobox protein engrailed| Length = 596 Score = 28.5 bits (62), Expect = 9.1 Identities = 14/34 (41%), Positives = 16/34 (47%) Frame = +3 Query: 315 PNPMPYHVQPPHHMQGVPPHMMSNMHPPLPPGQQ 416 P P+H Q PHH Q +P H HP P Q Sbjct: 88 PAQPPHHHQHPHHHQ-LPHHPHHQHHPQQQPSPQ 120 Score = 28.5 bits (62), Expect = 9.1 Identities = 20/60 (33%), Positives = 24/60 (40%) Frame = +3 Query: 285 LSLVNVPRFTPNPMPYHVQPPHHMQGVPPHMMSNMHPPLPPGQQHMIRMSGPMGHMPNSI 464 L + P + PMP QPPHH Q H + P P Q H + P P SI Sbjct: 74 LHIKQEPLGSDGPMP--AQPPHHHQHPHHHQL----PHHPHHQHHPQQQPSPQTSPPASI 127
>AP1_ARATH (P35631) Floral homeotic protein APETALA1 (Agamous-like MADS-box| protein AGL7) Length = 256 Score = 28.5 bits (62), Expect = 9.1 Identities = 13/25 (52%), Positives = 16/25 (64%) Frame = +3 Query: 384 NMHPPLPPGQQHMIRMSGPMGHMPN 458 NM PPLPP QQH I+ + H P+ Sbjct: 194 NMPPPLPP-QQHQIQHPYMLSHQPS 217
>SHAN1_HUMAN (Q9Y566) SH3 and multiple ankyrin repeat domains protein 1 (Shank1)| (Somatostatin receptor-interacting protein) (SSTR-interacting protein) (SSTRIP) Length = 2161 Score = 28.5 bits (62), Expect = 9.1 Identities = 17/54 (31%), Positives = 21/54 (38%), Gaps = 2/54 (3%) Frame = +3 Query: 315 PNPMPYHVQPPHHMQGVPPHM--MSNMHPPLPPGQQHMIRMSGPMGHMPNSIPP 470 P P +H P HH PP + HPP PP + G P+ PP Sbjct: 992 PLPPAHHHPPHHHHHHAPPPQPHHHHAHPPHPPEME--------TGGSPDDPPP 1037
>YP85_CAEEL (Q09442) Putative RNA-binding protein C08B11.5| Length = 388 Score = 28.5 bits (62), Expect = 9.1 Identities = 22/58 (37%), Positives = 25/58 (43%), Gaps = 2/58 (3%) Frame = +3 Query: 303 PRFTPNP--MPYHVQPPHHMQGVPPHMMSNMHPPLPPGQQHMIRMSGPMGHMPNSIPP 470 P TP P MP PP + PP M M PP PPG ++ G MP PP Sbjct: 304 PGRTPGPPGMPGMPPPPPPSRFGPPGM-GGMPPPPPPGMRY-------PGGMPPPPPP 353 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 74,764,703 Number of Sequences: 219361 Number of extensions: 1707078 Number of successful extensions: 7025 Number of sequences better than 10.0: 101 Number of HSP's better than 10.0 without gapping: 5859 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6783 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3072927439 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
