>gb|AY598796.4| Campylobacter coli strain CIT 382 CmeR (cmeR) gene, complete cds;
            efflux pump gene cluster, complete sequence; and CmeU
            gene, complete cds
          Length = 6698

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                     
Query: 447  tcttgcatatttaaattaaaatgct 471
            |||||||||||||||||||||||||
Sbjct: 4046 tcttgcatatttaaattaaaatgct 4022

>gb|AC008324.3| Drosophila melanogaster clone BACR25K01, complete sequence
          Length = 172939

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 254    tggtatcattttcataatgttttca 278
              |||||||||||||||||| ||||||
Sbjct: 154835 tggtatcattttcataattttttca 154859

>gb|AC008325.5| Drosophila melanogaster clone BACR05M06, complete sequence
          Length = 166423

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 254   tggtatcattttcataatgttttca 278
             |||||||||||||||||| ||||||
Sbjct: 85000 tggtatcattttcataattttttca 85024

>emb|AL606752.11| Human DNA sequence from clone RP11-740C1 on chromosome 1 Contains the
             OR10J5 gene for olfactory receptor family 10 subfamily J
             member 5 and an amyloid P component serum (APCS)
             pseudogene, complete sequence
          Length = 87134

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 166   atatttcaaacggctatatcttttt 190
             ||||||||||| |||||||||||||
Sbjct: 39850 atatttcaaactgctatatcttttt 39826

>gb|AC008971.6| Homo sapiens chromosome 5 clone CTD-2376B17, complete sequence
          Length = 131856

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 454   tatttaaattaaaatgctcat 474
             |||||||||||||||||||||
Sbjct: 73672 tatttaaattaaaatgctcat 73652

>gb|AC092809.2| Homo sapiens chromosome 1 clone RP11-365O16, complete sequence
          Length = 197621

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 271    tgttttcacacaatgaaaatg 291
              |||||||||||||||||||||
Sbjct: 151203 tgttttcacacaatgaaaatg 151183

>gb|AC139783.3| Homo sapiens chromosome 5 clone RP11-1084J3, complete sequence
          Length = 189108

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 454   tatttaaattaaaatgctcat 474
             |||||||||||||||||||||
Sbjct: 31798 tatttaaattaaaatgctcat 31818

>gb|AC139777.3| Homo sapiens chromosome 5 clone RP11-1011D24, complete sequence
          Length = 169254

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 454    tatttaaattaaaatgctcat 474
              |||||||||||||||||||||
Sbjct: 127967 tatttaaattaaaatgctcat 127987

>gb|AE003609.4| Drosophila melanogaster chromosome 2L, section 18 of 83 of the complete
              sequence
          Length = 319287

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 254    tggtatcattttcataatgttttca 278
              |||||||||||||||||| ||||||
Sbjct: 195239 tggtatcattttcataattttttca 195263

>emb|BX000705.13| Zebrafish DNA sequence from clone DKEY-76D18, complete sequence
          Length = 255779

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 62    accgaagtacgctttcctttt 82
             |||||||||||||||||||||
Sbjct: 26561 accgaagtacgctttcctttt 26581

>gb|AC161465.3| Gallus gallus BAC clone CH261-97D4 from chromosome ul, complete sequence
          Length = 213337

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 434    tgctctgtgttgttcttgcat 454
              |||||||||||||||||||||
Sbjct: 122977 tgctctgtgttgttcttgcat 122997

>gb|BC106621.1| Xenopus laevis similar to midnolin, mRNA (cDNA clone MGC:132104
            IMAGE:5079334), complete cds
          Length = 2341

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 273  ttttcacacaatgaaaatga 292
            ||||||||||||||||||||
Sbjct: 2288 ttttcacacaatgaaaatga 2307

>gb|AC134922.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0004D06, complete sequence
          Length = 157547

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 433   ttgctctgtgttgttcttgcatatttaa 460
             ||||||| || |||||||||||||||||
Sbjct: 97411 ttgctctttgatgttcttgcatatttaa 97438

>ref|XM_590421.2| PREDICTED: Bos taurus similar to taube nuss (LOC539938), mRNA
          Length = 945

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 26  tttcagaaattggaaggagt 45
           ||||||||||||||||||||
Sbjct: 218 tttcagaaattggaaggagt 237

>gb|AC183539.2| Pan troglodytes BAC clone CH251-340H7 from chromosome 15, complete
              sequence
          Length = 155024

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 478    tgtgtgtatagtagtgtgtt 497
              ||||||||||||||||||||
Sbjct: 114079 tgtgtgtatagtagtgtgtt 114060

>gb|DQ470897.1| Lindra thalassiae isolate AFTOL-ID 413 RNA polymerase II subunit 2
           (RPB2) gene, partial sequence
          Length = 1025

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 452 catatttaaattaaaatgct 471
           ||||||||||||||||||||
Sbjct: 93  catatttaaattaaaatgct 74

>gb|AY518220.1| Oryza sativa (indica cultivar-group) NBS-LRR-like protein A (NL-A),
             NBS-LRR-like protein B (NL-B), NBS-LRR-like protein C
             (NL-C), and NBS-LRR-like protein D (NL-D) genes, complete
             cds
          Length = 73617

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 433   ttgctctgtgttgttcttgcatatttaa 460
             ||||||| || |||||||||||||||||
Sbjct: 35767 ttgctctttgatgttcttgcatatttaa 35794

>gb|AC122002.2| Mus musculus BAC clone RP24-335H15 from 7, complete sequence
          Length = 114070

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 132   ttgtgtgtcaatagtttttt 151
             ||||||||||||||||||||
Sbjct: 78236 ttgtgtgtcaatagtttttt 78255

>gb|BC046658.1| Xenopus laevis similar to midnolin, mRNA (cDNA clone MGC:52897
            IMAGE:4889244), complete cds
          Length = 3395

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 273  ttttcacacaatgaaaatga 292
            ||||||||||||||||||||
Sbjct: 2275 ttttcacacaatgaaaatga 2294

>emb|AL499582.13| Human DNA sequence from clone RP11-371O12 on chromosome 10 Contains the
             5' end of the gene for double-stranded RNA specific
             adenosine deaminase (ADAR3) and a CpG island, complete
             sequence
          Length = 181532

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 74    tttccttttaagaaaacgta 93
             ||||||||||||||||||||
Sbjct: 97603 tttccttttaagaaaacgta 97622

>emb|AL133473.5| Human DNA sequence from clone RP1-236A3 on chromosome 6 Contains the 3'
             end of the gene for phenylalanine-tRNA synthetase (FARS1),
             complete sequence
          Length = 57423

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 264   ttcataatgttttcacacaa 283
             ||||||||||||||||||||
Sbjct: 25582 ttcataatgttttcacacaa 25563

>gb|AC100322.8| Mus musculus chromosome 7, clone RP23-124O24, complete sequence
          Length = 219314

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 132    ttgtgtgtcaatagtttttt 151
              ||||||||||||||||||||
Sbjct: 181912 ttgtgtgtcaatagtttttt 181893

>emb|BX663528.10| Zebrafish DNA sequence from clone DKEYP-47F9 in linkage group 17,
              complete sequence
          Length = 193986

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 452    catatttaaattaaaatgct 471
              ||||||||||||||||||||
Sbjct: 168796 catatttaaattaaaatgct 168777

>gb|AC026347.17| Homo sapiens 3 BAC RP11-362A9 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 195430

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 253    atggtatcattttcataatg 272
              ||||||||||||||||||||
Sbjct: 166374 atggtatcattttcataatg 166355

>gb|AC069242.13| Homo sapiens 3 BAC RP11-554J1 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 184664

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 253    atggtatcattttcataatg 272
              ||||||||||||||||||||
Sbjct: 120144 atggtatcattttcataatg 120163

>ref|NM_075405.3| Caenorhabditis elegans Y43F8C.6 (Y43F8C.6) mRNA, complete cds
          Length = 1462

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 336  cagtttccggcgattccttccgcgaact 363
            ||||||||||||||| ||||||| ||||
Sbjct: 1298 cagtttccggcgatttcttccgccaact 1271

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 433      ttgctctgtgttgttcttgcatatttaa 460
                ||||||| || |||||||||||||||||
Sbjct: 26384283 ttgctctttgatgttcttgcatatttaa 26384310

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 449     ttgcatatttaaattaaaat 468
               ||||||||||||||||||||
Sbjct: 6310316 ttgcatatttaaattaaaat 6310335

>gb|AC138649.2| Homo sapiens chromosome 15, clone RP11-1180F24, complete sequence
          Length = 151800

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 478    tgtgtgtatagtagtgtgtt 497
              ||||||||||||||||||||
Sbjct: 102137 tgtgtgtatagtagtgtgtt 102156

>emb|BX322625.9| Mouse DNA sequence from clone RP24-158I12 on chromosome 2, complete
             sequence
          Length = 98004

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 465   aaatgctcatgtctgtgtgt 484
             ||||||||||||||||||||
Sbjct: 46765 aaatgctcatgtctgtgtgt 46746

>dbj|AP003919.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1734_E04
          Length = 101439

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 449   ttgcatatttaaattaaaat 468
             ||||||||||||||||||||
Sbjct: 96453 ttgcatatttaaattaaaat 96472

>emb|AL032637.1|CEY43F8C Caenorhabditis elegans YAC Y43F8C, complete sequence
          Length = 120492

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 336   cagtttccggcgattccttccgcgaact 363
             ||||||||||||||| ||||||| ||||
Sbjct: 36387 cagtttccggcgatttcttccgccaact 36414

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 433      ttgctctgtgttgttcttgcatatttaa 460
                ||||||| || |||||||||||||||||
Sbjct: 26709837 ttgctctttgatgttcttgcatatttaa 26709864

>dbj|AP007287.1| Lotus japonicus genomic DNA, clone:LjT12M13, TM0054b, complete sequence
          Length = 77961

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 261   attttcataatgttttcaca 280
             ||||||||||||||||||||
Sbjct: 61892 attttcataatgttttcaca 61911

>emb|AL772224.2| Mouse DNA sequence from clone RP23-131N18 on chromosome 2, complete
             sequence
          Length = 182544

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 453   atatttaaattaaaatgctc 472
             ||||||||||||||||||||
Sbjct: 27238 atatttaaattaaaatgctc 27257

>gb|AC011767.12| Homo sapiens chromosome 15, clone RP11-26F2, complete sequence
          Length = 180233

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 478    tgtgtgtatagtagtgtgtt 497
              ||||||||||||||||||||
Sbjct: 179024 tgtgtgtatagtagtgtgtt 179005


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,303,602
Number of Sequences: 3902068
Number of extensions: 5303602
Number of successful extensions: 104641
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 104509
Number of HSP's gapped (non-prelim): 132
length of query: 510
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 488
effective length of database: 17,147,199,772
effective search space: 8367833488736
effective search space used: 8367833488736
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)