ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal14h20
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY736122.1| Triticum aestivum chloroplast inositol phosphatas... 735 0.0
2gb|AY377991.1| Triticum aestivum chloroplast-localized Ptr ToxA-... 708 0.0
3gb|AY104484.1| Zea mays PCO107854 mRNA sequence 303 3e-79
4ref|XM_478693.1| Oryza sativa (japonica cultivar-group), mRNA 285 7e-74
5gb|AY224446.1| Oryza sativa (japonica cultivar-group) isolate 23... 285 7e-74
6dbj|AK064914.1| Oryza sativa (japonica cultivar-group) cDNA clon... 285 7e-74
7dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 256 6e-65
8dbj|AP005195.3| Oryza sativa (japonica cultivar-group) genomic D... 256 6e-65
9ref|NM_127659.1| Arabidopsis thaliana THF1 AT2G20890 (THF1) mRNA... 64 5e-07
10gb|AC006234.4| Arabidopsis thaliana chromosome 2 clone F5H14 map... 64 5e-07
11gb|AY081596.1| Arabidopsis thaliana unknown protein (At2g20890) ... 64 5e-07
12gb|AY062799.1| Arabidopsis thaliana Unknown protein (At2g20890; ... 64 5e-07
13emb|BX818901.1|CNS0A8Y0 Arabidopsis thaliana Full-length cDNA Co... 64 5e-07
14emb|BX820020.1|CNS0A8FF Arabidopsis thaliana Full-length cDNA Co... 64 5e-07
15gb|AY087394.1| Arabidopsis thaliana clone 34875 mRNA, complete s... 64 5e-07
16gb|AY899908.1| Arabidopsis thaliana chloroplast thylakoid format... 64 5e-07
17gb|AC003694.1|AC003694 Mus musculus chromosome 19, clone CIT282B... 48 0.029
18gb|AE015451.1| Pseudomonas putida KT2440 complete genome 46 0.11
19gb|AY190958.1| Drosophila virilis clone DVIF01_45_J10 (D1457) ge... 44 0.45
20gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 44 0.45
21gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g... 42 1.8
22emb|BX820185.1|CNS0A8J4 Arabidopsis thaliana Full-length cDNA Co... 42 1.8
23dbj|AB089954.1| Micromonospora griseorubida gene cluster for the... 42 1.8
24ref|NM_103989.2| Arabidopsis thaliana structural molecule AT1G51... 40 7.0
25gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence 40 7.0
26gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence 40 7.0
27gb|AC140332.3| Mus musculus BAC clone RP23-408K9 from chromosome... 40 7.0
28gb|AY254102.1| Streptomyces castaneoglobisporus MelC gene, compl... 40 7.0
29emb|BX813641.1|CNS0AC3Y Arabidopsis thaliana Full-length cDNA Co... 40 7.0
30emb|BX814945.1|CNS0ABC0 Arabidopsis thaliana Full-length cDNA Co... 40 7.0
31gb|AC079828.4|AC079828 Arabidopsis thaliana chromosome 1 BAC F23... 40 7.0
32gb|BT005347.1| Arabidopsis thaliana At1g51115 mRNA, complete cds 40 7.0
33dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 7.0
34gb|AY087688.1| Arabidopsis thaliana clone 37689 mRNA, complete s... 40 7.0
35dbj|AK118545.1| Arabidopsis thaliana At1g51110 mRNA for unknown ... 40 7.0
36emb|AJ131520.2|TMA131520 Tropaeolum majus mRNA for alpha-D-xylos... 40 7.0
37gb|AY262106.1| Newcastle disease virus AF2240 large protein (L) ... 40 7.0
38gb|AC149086.4| Mus musculus BAC clone RP24-245L1 from 19, comple... 40 7.0
39emb|AL109767.7|CNS018OX Human chromosome 14 DNA sequence BAC R-8... 40 7.0
40emb|AL132819.6|CNS01DTO Human chromosome 14 DNA sequence BAC C-2... 40 7.0 
>gb|AY736122.1| Triticum aestivum chloroplast inositol phosphatase-like protein
           mRNA, complete cds; nuclear gene for chloroplast product
          Length = 909

 Score =  735 bits (371), Expect = 0.0
 Identities = 438/459 (95%), Gaps = 1/459 (0%)
 Strand = Plus / Plus

                                                                       
Query: 63  tatccagtgcgagagccggtagcagcccgaggactctcccatggcggccatatcgtcgct 122
           ||||| ||| |||||||||  | |||||||||| ||||||||||||||||||||||||||
Sbjct: 1   tatcccgtgagagagccggcggtagcccgaggagtctcccatggcggccatatcgtcgct 60

                                                                       
Query: 123 tccgttcgctgcactgcgccgagcggccgactggaggccgtcgacggcgactgccgcggt 182
           ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 61  tcctttcgctgcactgcgccgagcggccgactggaggccgtcaacggcgactgccgcggt 120

                                                                       
Query: 183 gagcgtctccggtggcgtcatgctcaacgcgagggctcggcggggctcacgttcggtggt 242
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 121 gagcgtctccggtggcgtcatgctcaacgcgagggctcggcggggatcacgttcggtggt 180

                                                                       
Query: 243 gcgctgcgtcatcactgccggtgatattccacctactgtggcagatacaaagatgaactt 302
           ||||||||||   || || |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 181 gcgctgcgtcgctacggctggtgatatcccacctactgtggcagatacaaagatgaactt 240

                                                                       
Query: 303 cctgaagtcgtacaaacgtcctattccaagcatttacagtacagttctacaagaactttt 362
           ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 241 cctgaagtcatacaaacgtcctattccaagcatttacagtacagtcctacaagaactttt 300

                                                                       
Query: 363 ggtgcagcaacatctgatgagatacaaaagtacgtatcaagtatgatcctgtgtttgctc 422
           ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct: 301 ggtgcagcaacatctgatgagatacaaaagtacctatc-agtatgatcctgtgtttgctc 359

                                                                       
Query: 423 ttggatttgtcaccgtctatgaccagcttatggaagggtaccccagcaacgaggacaggg 482
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 360 ttggatttgtcaccgtctatgaccagcttatggaagggtaccccagcaccgaggacaggg 419

                                                  
Query: 483 atgccatcttcaagtcatatgtaacggcgttaaatgaag 521
           ||||||||||||||||||| |||||||||||||||||||
Sbjct: 420 atgccatcttcaagtcatacgtaacggcgttaaatgaag 458
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>gb|AY377991.1| Triticum aestivum chloroplast-localized Ptr ToxA-binding protein1
           (TaThf1) mRNA, complete cds; nuclear gene for
           chloroplast product
          Length = 1130

 Score =  708 bits (357), Expect = 0.0
 Identities = 409/425 (96%), Gaps = 1/425 (0%)
 Strand = Plus / Plus

                                                                       
Query: 97  tctcccatggcggccatatcgtcgcttccgttcgctgcactgcgccgagcggccgactgg 156
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1   tctcccatggcggccatatcgtcgcttcctttcgctgcactgcgccgagcggccgactgg 60

                                                                       
Query: 157 aggccgtcgacggcgactgccgcggtgagcgtctccggtggcgtcatgctcaacgcgagg 216
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  aggccgtcaacggcgactgccgcggtgagcgtctccggtggcgtcatgctcaacgcgagg 120

                                                                       
Query: 217 gctcggcggggctcacgttcggtggtgcgctgcgtcatcactgccggtgatattccacct 276
           ||||||||||| ||||||||||||||||||||||||   || || |||||||| ||||||
Sbjct: 121 gctcggcggggatcacgttcggtggtgcgctgcgtcgctacggctggtgatatcccacct 180

                                                                       
Query: 277 actgtggcagatacaaagatgaacttcctgaagtcgtacaaacgtcctattccaagcatt 336
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 181 actgtggcagatacaaagatgaacttcctgaagtcatacaaacgtcctattccaagcatt 240

                                                                       
Query: 337 tacagtacagttctacaagaacttttggtgcagcaacatctgatgagatacaaaagtacg 396
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 241 tacagtacagtcctacaagaacttttggtgcagcaacatctgatgagatacaaaagtacc 300

                                                                       
Query: 397 tatcaagtatgatcctgtgtttgctcttggatttgtcaccgtctatgaccagcttatgga 456
           |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 301 tatc-agtatgatcctgtgtttgctcttggatttgtcactgtctatgaccagcttatgga 359

                                                                       
Query: 457 agggtaccccagcaacgaggacagggatgccatcttcaagtcatatgtaacggcgttaaa 516
           |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 360 agggtaccccagcaccgaggacagggatgccatcttcaagtcatacgtaacggcgttaaa 419

                
Query: 517 tgaag 521
           |||||
Sbjct: 420 tgaag 424
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>gb|AY104484.1| Zea mays PCO107854 mRNA sequence
          Length = 842

 Score =  303 bits (153), Expect = 3e-79
 Identities = 354/420 (84%), Gaps = 7/420 (1%)
 Strand = Plus / Plus

                                                                       
Query: 102 catggcggccatatcgtcgcttccgttcgctgcactgcgccgagcggccgactggaggcc 161
           |||||||||||||||||| ||||| ||||| || |||||| |||| ||||| ||||||||
Sbjct: 128 catggcggccatatcgtcacttcccttcgcggcgctgcgcggagccgccgagtggaggcc 187

                                                                       
Query: 162 gtcgacggcgactgccgcggtgagcgtctccggtggcgtcatgctcaacgcgagggctcg 221
           |||| || || | || ||      ||||||||| | |||| |||||| ||||||| ||||
Sbjct: 188 gtcgtcgacggcggcggc------cgtctccggcgccgtcgtgctcagcgcgaggtctcg 241

                                                                       
Query: 222 gcggggctcacgttcggtggtgcgctgcgtcatcactgccggtgatattccacctactgt 281
            |||||||| || ||||||||||| || |||  |||  | |||||| | ||||| |||||
Sbjct: 242 ccggggctcgcgctcggtggtgcgatgtgtcgccacgacgggtgatgtcccacccactgt 301

                                                                       
Query: 282 ggcagatacaaagatgaacttcctgaagtcgtacaaacgtcctattccaagcatttacag 341
            ||||| |||||  |||||||||| ||||| |||||||| || || ||||||||||||||
Sbjct: 302 cgcagaaacaaaactgaacttccttaagtcatacaaacgcccaatcccaagcatttacag 361

                                                                       
Query: 342 tacagttctacaagaacttttggtgcagcaacatctgatgagatacaaaagtacgtatca 401
           | ||||  ||||||||||||||||||||||||| ||||||||||||||||  || |||||
Sbjct: 362 tgcagtcttacaagaacttttggtgcagcaacacctgatgagatacaaaaaaacctatca 421

                                                                       
Query: 402 agtatgatcctgtgtttgctcttggatttgtcaccgtctatgaccagcttatggaagggt 461
            ||||||| |||||||||||||||| || ||||| |||||||| ||||| ||||||||||
Sbjct: 422 -gtatgatgctgtgtttgctcttggcttcgtcactgtctatgatcagctcatggaagggt 480

                                                                       
Query: 462 accccagcaacgaggacagggatgccatcttcaagtcatatgtaacggcgttaaatgaag 521
           |||||||||| ||||||| |||| ||||||||||| ||||| |||| || ||||||||||
Sbjct: 481 accccagcaatgaggacaaggattccatcttcaaggcatatataacagcattaaatgaag 540
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>ref|XM_478693.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1153

 Score =  285 bits (144), Expect = 7e-74
 Identities = 280/324 (86%), Gaps = 1/324 (0%)
 Strand = Plus / Plus

                                                                       
Query: 198 cgtcatgctcaacgcgagggctcggcggggctcacgttcggtggtgcgctgcgtcatcac 257
           |||| |||||| || |||| | |||||||| || || ||||||||||||||||||  |||
Sbjct: 198 cgtcgtgctcagcgtgaggccccggcgggggtcgcgctcggtggtgcgctgcgtcgccac 257

                                                                       
Query: 258 tgccggtgatattccacctactgtggcagatacaaagatgaacttcctgaagtcgtacaa 317
            || || ||| ||||||| ||||| ||||| ||||||||||| || || ||||| |||||
Sbjct: 258 ggcgggcgatgttccacccactgtcgcagaaacaaagatgaattttctcaagtcatacaa 317

                                                                       
Query: 318 acgtcctattccaagcatttacagtacagttctacaagaacttttggtgcagcaacatct 377
            |||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 318 gcgtcctatcctaagcatttacagtacagttctacaagaacttttggtacagcaacatct 377

                                                                       
Query: 378 gatgagatacaaaagtacgtatcaagtatgatcctgtgtttgctcttggatttgtcaccg 437
           ||||||||||||||  || |||||| |||||| | |||||||||||||| ||||| ||||
Sbjct: 378 gatgagatacaaaacaacatatcaa-tatgatgcggtgtttgctcttggttttgtgaccg 436

                                                                       
Query: 438 tctatgaccagcttatggaagggtaccccagcaacgaggacagggatgccatcttcaagt 497
           |||||||||| || |||||||||||||| ||||| ||||| |||||||| ||||||||  
Sbjct: 437 tctatgaccaactcatggaagggtaccctagcaatgaggatagggatgcaatcttcaaag 496

                                   
Query: 498 catatgtaacggcgttaaatgaag 521
           ||||| |||| |||||||| ||||
Sbjct: 497 catatataacagcgttaaacgaag 520



 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 63/69 (91%)
 Strand = Plus / Plus

                                                                       
Query: 103 atggcggccatatcgtcgcttccgttcgctgcactgcgccgagcggccgactggaggccg 162
           |||||||||||||| |||||||| ||||| ||||||||||| || |||||||| ||||||
Sbjct: 100 atggcggccatatcttcgcttcccttcgcggcactgcgccgggccgccgactgcaggccg 159

                    
Query: 163 tcgacggcg 171
           |||||||||
Sbjct: 160 tcgacggcg 168
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>gb|AY224446.1| Oryza sativa (japonica cultivar-group) isolate 23045 inositol
           phosphatase-like protein mRNA, complete cds
          Length = 864

 Score =  285 bits (144), Expect = 7e-74
 Identities = 280/324 (86%), Gaps = 1/324 (0%)
 Strand = Plus / Plus

                                                                       
Query: 198 cgtcatgctcaacgcgagggctcggcggggctcacgttcggtggtgcgctgcgtcatcac 257
           |||| |||||| || |||| | |||||||| || || ||||||||||||||||||  |||
Sbjct: 99  cgtcgtgctcagcgtgaggccccggcgggggtcgcgctcggtggtgcgctgcgtcgccac 158

                                                                       
Query: 258 tgccggtgatattccacctactgtggcagatacaaagatgaacttcctgaagtcgtacaa 317
            || || ||| ||||||| ||||| ||||| ||||||||||| || || ||||| |||||
Sbjct: 159 ggcgggcgatgttccacccactgtcgcagaaacaaagatgaattttctcaagtcatacaa 218

                                                                       
Query: 318 acgtcctattccaagcatttacagtacagttctacaagaacttttggtgcagcaacatct 377
            |||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 219 gcgtcctatcctaagcatttacagtacagttctacaagaacttttggtacagcaacatct 278

                                                                       
Query: 378 gatgagatacaaaagtacgtatcaagtatgatcctgtgtttgctcttggatttgtcaccg 437
           ||||||||||||||  || |||||| |||||| | |||||||||||||| ||||| ||||
Sbjct: 279 gatgagatacaaaacaacatatcaa-tatgatgcggtgtttgctcttggttttgtgaccg 337

                                                                       
Query: 438 tctatgaccagcttatggaagggtaccccagcaacgaggacagggatgccatcttcaagt 497
           |||||||||| || |||||||||||||| ||||| ||||| |||||||| ||||||||  
Sbjct: 338 tctatgaccaactcatggaagggtaccctagcaatgaggatagggatgcaatcttcaaag 397

                                   
Query: 498 catatgtaacggcgttaaatgaag 521
           ||||| |||| |||||||| ||||
Sbjct: 398 catatataacagcgttaaacgaag 421



 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 63/69 (91%)
 Strand = Plus / Plus

                                                                       
Query: 103 atggcggccatatcgtcgcttccgttcgctgcactgcgccgagcggccgactggaggccg 162
           |||||||||||||| |||||||| ||||| ||||||||||| || |||||||| ||||||
Sbjct: 1   atggcggccatatcttcgcttcccttcgcggcactgcgccgggccgccgactgcaggccg 60

                    
Query: 163 tcgacggcg 171
           |||||||||
Sbjct: 61  tcgacggcg 69
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>dbj|AK064914.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000M13, full
           insert sequence
          Length = 1152

 Score =  285 bits (144), Expect = 7e-74
 Identities = 280/324 (86%), Gaps = 1/324 (0%)
 Strand = Plus / Plus

                                                                       
Query: 198 cgtcatgctcaacgcgagggctcggcggggctcacgttcggtggtgcgctgcgtcatcac 257
           |||| |||||| || |||| | |||||||| || || ||||||||||||||||||  |||
Sbjct: 197 cgtcgtgctcagcgtgaggccccggcgggggtcgcgctcggtggtgcgctgcgtcgccac 256

                                                                       
Query: 258 tgccggtgatattccacctactgtggcagatacaaagatgaacttcctgaagtcgtacaa 317
            || || ||| ||||||| ||||| ||||| ||||||||||| || || ||||| |||||
Sbjct: 257 ggcgggcgatgttccacccactgtcgcagaaacaaagatgaattttctcaagtcatacaa 316

                                                                       
Query: 318 acgtcctattccaagcatttacagtacagttctacaagaacttttggtgcagcaacatct 377
            |||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 317 gcgtcctatcctaagcatttacagtacagttctacaagaacttttggtacagcaacatct 376

                                                                       
Query: 378 gatgagatacaaaagtacgtatcaagtatgatcctgtgtttgctcttggatttgtcaccg 437
           ||||||||||||||  || |||||| |||||| | |||||||||||||| ||||| ||||
Sbjct: 377 gatgagatacaaaacaacatatcaa-tatgatgcggtgtttgctcttggttttgtgaccg 435

                                                                       
Query: 438 tctatgaccagcttatggaagggtaccccagcaacgaggacagggatgccatcttcaagt 497
           |||||||||| || |||||||||||||| ||||| ||||| |||||||| ||||||||  
Sbjct: 436 tctatgaccaactcatggaagggtaccctagcaatgaggatagggatgcaatcttcaaag 495

                                   
Query: 498 catatgtaacggcgttaaatgaag 521
           ||||| |||| |||||||| ||||
Sbjct: 496 catatataacagcgttaaacgaag 519



 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 63/69 (91%)
 Strand = Plus / Plus

                                                                       
Query: 103 atggcggccatatcgtcgcttccgttcgctgcactgcgccgagcggccgactggaggccg 162
           |||||||||||||| |||||||| ||||| ||||||||||| || |||||||| ||||||
Sbjct: 99  atggcggccatatcttcgcttcccttcgcggcactgcgccgggccgccgactgcaggccg 158

                    
Query: 163 tcgacggcg 171
           |||||||||
Sbjct: 159 tcgacggcg 167
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  256 bits (129), Expect = 6e-65
 Identities = 223/253 (88%), Gaps = 1/253 (0%)
 Strand = Plus / Minus

                                                                            
Query: 269      ttccacctactgtggcagatacaaagatgaacttcctgaagtcgtacaaacgtcctattc 328
                ||||||| ||||| ||||| ||||||||||| || || ||||| ||||| |||||||| |
Sbjct: 22268329 ttccacccactgtcgcagaaacaaagatgaattttctcaagtcatacaagcgtcctatcc 22268270

                                                                            
Query: 329      caagcatttacagtacagttctacaagaacttttggtgcagcaacatctgatgagataca 388
                 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 22268269 taagcatttacagtacagttctacaagaacttttggtacagcaacatctgatgagataca 22268210

                                                                            
Query: 389      aaagtacgtatcaagtatgatcctgtgtttgctcttggatttgtcaccgtctatgaccag 448
                |||  || |||||| |||||| | |||||||||||||| ||||| |||||||||||||| 
Sbjct: 22268209 aaacaacatatcaa-tatgatgcggtgtttgctcttggttttgtgaccgtctatgaccaa 22268151

                                                                            
Query: 449      cttatggaagggtaccccagcaacgaggacagggatgccatcttcaagtcatatgtaacg 508
                || |||||||||||||| ||||| ||||| |||||||| ||||||||  ||||| |||| 
Sbjct: 22268150 ctcatggaagggtaccctagcaatgaggatagggatgcaatcttcaaagcatatataaca 22268091

                             
Query: 509      gcgttaaatgaag 521
                |||||||| ||||
Sbjct: 22268090 gcgttaaacgaag 22268078



 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 63/69 (91%)
 Strand = Plus / Minus

                                                                            
Query: 103      atggcggccatatcgtcgcttccgttcgctgcactgcgccgagcggccgactggaggccg 162
                |||||||||||||| |||||||| ||||| ||||||||||| || |||||||| ||||||
Sbjct: 22269475 atggcggccatatcttcgcttcccttcgcggcactgcgccgggccgccgactgcaggccg 22269416

                         
Query: 163      tcgacggcg 171
                |||||||||
Sbjct: 22269415 tcgacggcg 22269407



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                       
Query: 198      cgtcatgctcaacgcgagggctcggcggggctcacgttcggtggtgcgctgcgtc 252
                |||| |||||| || |||| | |||||||| || || ||||||||||||||||||
Sbjct: 22269377 cgtcgtgctcagcgtgaggccccggcgggggtcgcgctcggtggtgcgctgcgtc 22269323
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>dbj|AP005195.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0567H04
          Length = 181420

 Score =  256 bits (129), Expect = 6e-65
 Identities = 223/253 (88%), Gaps = 1/253 (0%)
 Strand = Plus / Minus

                                                                         
Query: 269   ttccacctactgtggcagatacaaagatgaacttcctgaagtcgtacaaacgtcctattc 328
             ||||||| ||||| ||||| ||||||||||| || || ||||| ||||| |||||||| |
Sbjct: 73575 ttccacccactgtcgcagaaacaaagatgaattttctcaagtcatacaagcgtcctatcc 73516

                                                                         
Query: 329   caagcatttacagtacagttctacaagaacttttggtgcagcaacatctgatgagataca 388
              |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 73515 taagcatttacagtacagttctacaagaacttttggtacagcaacatctgatgagataca 73456

                                                                         
Query: 389   aaagtacgtatcaagtatgatcctgtgtttgctcttggatttgtcaccgtctatgaccag 448
             |||  || |||||| |||||| | |||||||||||||| ||||| |||||||||||||| 
Sbjct: 73455 aaacaacatatcaa-tatgatgcggtgtttgctcttggttttgtgaccgtctatgaccaa 73397

                                                                         
Query: 449   cttatggaagggtaccccagcaacgaggacagggatgccatcttcaagtcatatgtaacg 508
             || |||||||||||||| ||||| ||||| |||||||| ||||||||  ||||| |||| 
Sbjct: 73396 ctcatggaagggtaccctagcaatgaggatagggatgcaatcttcaaagcatatataaca 73337

                          
Query: 509   gcgttaaatgaag 521
             |||||||| ||||
Sbjct: 73336 gcgttaaacgaag 73324



 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 63/69 (91%)
 Strand = Plus / Minus

                                                                         
Query: 103   atggcggccatatcgtcgcttccgttcgctgcactgcgccgagcggccgactggaggccg 162
             |||||||||||||| |||||||| ||||| ||||||||||| || |||||||| ||||||
Sbjct: 74721 atggcggccatatcttcgcttcccttcgcggcactgcgccgggccgccgactgcaggccg 74662

                      
Query: 163   tcgacggcg 171
             |||||||||
Sbjct: 74661 tcgacggcg 74653



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                    
Query: 198   cgtcatgctcaacgcgagggctcggcggggctcacgttcggtggtgcgctgcgtc 252
             |||| |||||| || |||| | |||||||| || || ||||||||||||||||||
Sbjct: 74623 cgtcgtgctcagcgtgaggccccggcgggggtcgcgctcggtggtgcgctgcgtc 74569
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>ref|NM_127659.1| Arabidopsis thaliana THF1 AT2G20890 (THF1) mRNA, complete cds
          Length = 1246

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                   
Query: 404 tatgatcctgtgtttgctcttggatttgtcaccgtctatgaccagcttatggaagg 459
           ||||||||||| ||||| |||||||||||||| || ||||| ||||| ||||||||
Sbjct: 437 tatgatcctgtttttgcccttggatttgtcactgtatatgatcagctcatggaagg 492
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>gb|AC006234.4| Arabidopsis thaliana chromosome 2 clone F5H14 map mi148, complete
             sequence
          Length = 129667

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 50/56 (89%)
 Strand = Plus / Minus

                                                                     
Query: 404   tatgatcctgtgtttgctcttggatttgtcaccgtctatgaccagcttatggaagg 459
             ||||||||||| ||||| |||||||||||||| || ||||| ||||| ||||||||
Sbjct: 43483 tatgatcctgtttttgcccttggatttgtcactgtatatgatcagctcatggaagg 43428
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>gb|AY081596.1| Arabidopsis thaliana unknown protein (At2g20890) mRNA, complete cds
          Length = 953

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                   
Query: 404 tatgatcctgtgtttgctcttggatttgtcaccgtctatgaccagcttatggaagg 459
           ||||||||||| ||||| |||||||||||||| || ||||| ||||| ||||||||
Sbjct: 322 tatgatcctgtttttgcccttggatttgtcactgtatatgatcagctcatggaagg 377
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>gb|AY062799.1| Arabidopsis thaliana Unknown protein (At2g20890; F5H14.14) mRNA,
           complete cds
          Length = 1143

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                   
Query: 404 tatgatcctgtgtttgctcttggatttgtcaccgtctatgaccagcttatggaagg 459
           ||||||||||| ||||| |||||||||||||| || ||||| ||||| ||||||||
Sbjct: 432 tatgatcctgtttttgcccttggatttgtcactgtatatgatcagctcatggaagg 487
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>emb|BX818901.1|CNS0A8Y0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB24ZE08 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1114

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                   
Query: 404 tatgatcctgtgtttgctcttggatttgtcaccgtctatgaccagcttatggaagg 459
           ||||||||||| ||||| |||||||||||||| || ||||| ||||| ||||||||
Sbjct: 419 tatgatcctgtttttgcccttggatttgtcactgtatatgatcagctcatggaagg 474
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>emb|BX820020.1|CNS0A8FF Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS62ZD04 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1131

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                   
Query: 404 tatgatcctgtgtttgctcttggatttgtcaccgtctatgaccagcttatggaagg 459
           ||||||||||| ||||| |||||||||||||| || ||||| ||||| ||||||||
Sbjct: 397 tatgatcctgtttttgcccttggatttgtcactgtatatgatcagctcatggaagg 452
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>gb|AY087394.1| Arabidopsis thaliana clone 34875 mRNA, complete sequence
          Length = 1246

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                   
Query: 404 tatgatcctgtgtttgctcttggatttgtcaccgtctatgaccagcttatggaagg 459
           ||||||||||| ||||| |||||||||||||| || ||||| ||||| ||||||||
Sbjct: 437 tatgatcctgtttttgcccttggatttgtcactgtatatgatcagctcatggaagg 492
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>gb|AY899908.1| Arabidopsis thaliana chloroplast thylakoid formation 1 (THF1) mRNA,
           complete cds; nuclear gene for chloroplast product
          Length = 1245

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                   
Query: 404 tatgatcctgtgtttgctcttggatttgtcaccgtctatgaccagcttatggaagg 459
           ||||||||||| ||||| |||||||||||||| || ||||| ||||| ||||||||
Sbjct: 436 tatgatcctgtttttgcccttggatttgtcactgtatatgatcagctcatggaagg 491
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>gb|AC003694.1|AC003694 Mus musculus chromosome 19, clone CIT282B21, complete sequence
          Length = 186314

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 475   ggacagggatgccatcttcaagtc 498
             ||||||||||||||||||||||||
Sbjct: 44823 ggacagggatgccatcttcaagtc 44800
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>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 24      ccttttgccctcaccggcggtgt 46
               |||||||||||||||||||||||
Sbjct: 6142967 ccttttgccctcaccggcggtgt 6142989
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>gb|AY190958.1| Drosophila virilis clone DVIF01_45_J10 (D1457) genomic sequence
          Length = 44255

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 181   gtgagcgtctccggtggcgtca 202
             ||||||||||||||||||||||
Sbjct: 10405 gtgagcgtctccggtggcgtca 10384
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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 100     cccatggcggccatatcgtcgc 121
               ||||||||||||||||||||||
Sbjct: 2996924 cccatggcggccatatcgtcgc 2996945
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>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 175     gccgcggtgagcgtctccggtggcg 199
               ||||||| |||||||||||||||||
Sbjct: 2649540 gccgcggcgagcgtctccggtggcg 2649516
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>emb|BX820185.1|CNS0A8J4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS88ZH01 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1158

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 49/57 (85%), Gaps = 1/57 (1%)
 Strand = Plus / Plus

                                                                    
Query: 404 tatgatcctgtgtttgctct-tggatttgtcaccgtctatgaccagcttatggaagg 459
           ||||||||||| ||||| |  |||||||||||| || ||||| ||||| ||||||||
Sbjct: 420 tatgatcctgtttttgccccgtggatttgtcactgtatatgatcagctcatggaagg 476
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>dbj|AB089954.1| Micromonospora griseorubida gene cluster for the polyketide macrolide
             mycinamicin, partial and comeplete cds
          Length = 58343

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 34    tcaccggcggtgtcgaccatc 54
             |||||||||||||||||||||
Sbjct: 39142 tcaccggcggtgtcgaccatc 39162
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>ref|NM_103989.2| Arabidopsis thaliana structural molecule AT1G51110 mRNA, complete cds
          Length = 1437

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 486  ccatcttcaagtcatatgta 505
            ||||||||||||||||||||
Sbjct: 1116 ccatcttcaagtcatatgta 1097
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>gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence
          Length = 1395069

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 161    cgtcgacggcgactgccgcg 180
              ||||||||||||||||||||
Sbjct: 948933 cgtcgacggcgactgccgcg 948914
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>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 161    cgtcgacggcgactgccgcg 180
              ||||||||||||||||||||
Sbjct: 247276 cgtcgacggcgactgccgcg 247295
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>gb|AC140332.3| Mus musculus BAC clone RP23-408K9 from chromosome 19, complete
            sequence
          Length = 206515

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 475  ggacagggatgccatcttcaagtc 498
            |||||||| |||||||||||||||
Sbjct: 7961 ggacagggctgccatcttcaagtc 7938
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>gb|AY254102.1| Streptomyces castaneoglobisporus MelC gene, complete cds
          Length = 381

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 164 cgacggcgactgccgcggtgagcg 187
           |||||||| |||||||||||||||
Sbjct: 49  cgacggcggctgccgcggtgagcg 26
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>emb|BX813641.1|CNS0AC3Y Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB2ZA12 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1271

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 486  ccatcttcaagtcatatgta 505
            ||||||||||||||||||||
Sbjct: 1075 ccatcttcaagtcatatgta 1056
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>emb|BX814945.1|CNS0ABC0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS1ZF08 of Adult vegetative tissue of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1308

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 486  ccatcttcaagtcatatgta 505
            ||||||||||||||||||||
Sbjct: 1085 ccatcttcaagtcatatgta 1066
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>gb|AC079828.4|AC079828 Arabidopsis thaliana chromosome 1 BAC F23H24 genomic sequence, complete
             sequence
          Length = 45337

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 486   ccatcttcaagtcatatgta 505
             ||||||||||||||||||||
Sbjct: 18104 ccatcttcaagtcatatgta 18123
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>gb|BT005347.1| Arabidopsis thaliana At1g51115 mRNA, complete cds
          Length = 1230

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 486  ccatcttcaagtcatatgta 505
            ||||||||||||||||||||
Sbjct: 1084 ccatcttcaagtcatatgta 1065
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 38      cggcggtgtcgaccatccgc 57
               ||||||||||||||||||||
Sbjct: 7160641 cggcggtgtcgaccatccgc 7160660
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>gb|AY087688.1| Arabidopsis thaliana clone 37689 mRNA, complete sequence
          Length = 1439

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 486  ccatcttcaagtcatatgta 505
            ||||||||||||||||||||
Sbjct: 1117 ccatcttcaagtcatatgta 1098
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>dbj|AK118545.1| Arabidopsis thaliana At1g51110 mRNA for unknown protein, complete
            cds, clone: RAFL19-77-I08
          Length = 1333

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 486  ccatcttcaagtcatatgta 505
            ||||||||||||||||||||
Sbjct: 1088 ccatcttcaagtcatatgta 1069
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>emb|AJ131520.2|TMA131520 Tropaeolum majus mRNA for alpha-D-xylosidase
          Length = 3151

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 289  acaaagatgaacttcctgaa 308
            ||||||||||||||||||||
Sbjct: 2459 acaaagatgaacttcctgaa 2478
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>gb|AY262106.1| Newcastle disease virus AF2240 large protein (L) mRNA, complete cds
          Length = 6615

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 473  gaggacagggatgccatctt 492
            ||||||||||||||||||||
Sbjct: 4996 gaggacagggatgccatctt 5015
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>gb|AC149086.4| Mus musculus BAC clone RP24-245L1 from 19, complete sequence
          Length = 185283

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 475   ggacagggatgccatcttcaagtc 498
             |||||||| |||||||||||||||
Sbjct: 66251 ggacagggctgccatcttcaagtc 66274
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>emb|AL109767.7|CNS018OX Human chromosome 14 DNA sequence BAC R-889B13 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 184039

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 359   ttttggtgcagcaacatctg 378
             ||||||||||||||||||||
Sbjct: 72474 ttttggtgcagcaacatctg 72493
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>emb|AL132819.6|CNS01DTO Human chromosome 14 DNA sequence BAC C-2200A16 of library CalTech-D
             from chromosome 14 of Homo sapiens (Human), complete
             sequence
          Length = 140073

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 359   ttttggtgcagcaacatctg 378
             ||||||||||||||||||||
Sbjct: 97330 ttttggtgcagcaacatctg 97349


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,216,279
Number of Sequences: 3902068
Number of extensions: 3216279
Number of successful extensions: 68414
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 68121
Number of HSP's gapped (non-prelim): 284
length of query: 521
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 498
effective length of database: 17,143,297,704
effective search space: 8537362256592
effective search space used: 8537362256592
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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