Clone Information

BLAST Search Result

Clone Name	baal14g21
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RHO_MYCTU (P66028) Transcription termination factor rho (EC 3.6....	36	0.053
2	RHO_MYCBO (P66029) Transcription termination factor rho (EC 3.6....	36	0.053
3	ZF64A_HUMAN (Q9NPA5) Zinc finger protein 64, isoforms 1 and 2 (Z...	34	0.15
4	HEMH_MYCAV (O07401) Ferrochelatase (EC 4.99.1.1) (Protoheme ferr...	34	0.20
5	HEBP2_HUMAN (Q9Y5Z4) Heme-binding protein 2 (Protein SOUL) (Plac...	32	0.58
6	PLS_STAES (Q8CQD9) Accumulation-associated protein precursor	32	0.76
7	ADRM1_MOUSE (Q9JKV1) Adhesion-regulating molecule 1 precursor (1...	32	0.76
8	GRA6_TOXGO (Q27003) Dense granule protein 6 (Protein GRA 6) (Ant...	32	0.99
9	IF35_MOUSE (Q9DCH4) Eukaryotic translation initiation factor 3 s...	32	0.99
10	TNR8_HUMAN (P28908) Tumor necrosis factor receptor superfamily m...	31	1.3
11	LRC50_HUMAN (Q8NEP3) Leucine-rich repeat-containing protein 50	31	1.3
12	NDF4_XENLA (P79920) Neurogenic differentiation factor 4 (NeuroD4...	31	1.3
13	IF2_BORBR (Q7WHG2) Translation initiation factor IF-2	31	1.7
14	RDRP_TCV (P17460) Probable RNA-directed RNA polymerase (EC 2.7.7...	30	2.2
15	AN32A_RAT (P49911) Acidic leucine-rich nuclear phosphoprotein 32...	30	2.9
16	IF2_BORPE (Q7VYR2) Translation initiation factor IF-2	30	3.8
17	PMP20_CHLPN (Q9Z812) Probable outer membrane protein pmp20 precu...	30	3.8
18	CS021_HUMAN (Q8IVT2) Protein C19orf21	30	3.8
19	IF2_BORPA (Q7W9A5) Translation initiation factor IF-2	30	3.8
20	MCL1_CANFA (Q8HYS5) Induced myeloid leukemia cell differentiatio...	29	4.9
21	TNNI3_CAEEL (Q9XUN9) Troponin I 3 (TnI 3)	29	4.9
22	YHT1_YEAST (P38835) PH domain protein YHR131C	29	4.9
23	RL15_BUCAK (P46185) 50S ribosomal protein L15	29	4.9
24	PANK1_HUMAN (Q8TE04) Pantothenate kinase 1 (EC 2.7.1.33) (Pantot...	29	4.9
25	IF2_DEIRA (Q9RTG5) Translation initiation factor IF-2	29	4.9
26	PI5PA_HUMAN (Q15735) Phosphatidylinositol 4,5-bisphosphate 5-pho...	29	4.9
27	SODC_MYCPA (Q9AGW2) Superoxide dismutase [Cu-Zn] precursor (EC 1...	29	6.4
28	YQU3_CAEEL (Q09550) Hypothetical protein F26C11.3 precursor	29	6.4
29	SYTL4_HUMAN (Q96C24) Synaptotagmin-like protein 4 (Exophilin-2) ...	28	8.4
30	MYPT1_HUMAN (O14974) Protein phosphatase 1 regulatory subunit 12...	28	8.4
31	METB_ARATH (P55217) Cystathionine gamma-synthase, chloroplast pr...	28	8.4
32	MASY_STRAE (P77947) Malate synthase (EC 2.3.3.9)	28	8.4
33	IF2_BRUSU (Q8FXT2) Translation initiation factor IF-2	28	8.4
34	RL15_SHIFL (P66075) 50S ribosomal protein L15	28	8.4
35	RL15_SALTY (P66073) 50S ribosomal protein L15	28	8.4
36	RL15_SALTI (P66074) 50S ribosomal protein L15	28	8.4
37	RL15_SALPA (Q5PK03) 50S ribosomal protein L15	28	8.4
38	RL15_SALCH (Q57J51) 50S ribosomal protein L15	28	8.4
39	RL15_PHOLL (Q7MYH0) 50S ribosomal protein L15	28	8.4
40	RL15_PASMU (Q9CL49) 50S ribosomal protein L15	28	8.4
41	RL15_MANSM (Q65QX4) 50S ribosomal protein L15	28	8.4
42	RL15_HAEIN (P44353) 50S ribosomal protein L15	28	8.4
43	RL15_HAEDU (Q7VKF2) 50S ribosomal protein L15	28	8.4
44	RL15_ECOLI (P02413) 50S ribosomal protein L15	28	8.4
45	RL15_ECOL6 (P66071) 50S ribosomal protein L15	28	8.4
46	RL15_ECO57 (P66072) 50S ribosomal protein L15	28	8.4
47	NELFA_DROME (Q86NP2) Negative elongation factor A homolog	28	8.4

>RHO_MYCTU (P66028) Transcription termination factor rho (EC 3.6.1.-)|
           (ATP-dependent helicase rho)
          Length = 602

 Score = 35.8 bits (81), Expect = 0.053
 Identities = 24/52 (46%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
 Frame = +3

Query: 27  RTNDADDHGSGDGQADGREDHRG--DAEARGGPHRRRLRDPQVPAVRRRRGD 176
           R  DA     GD QA G +  RG  D EAR G   RR RD      RRRRG+
Sbjct: 162 RGTDAGGDQGGDQQASGGQQARGDEDGEARQGRRGRRFRD------RRRRGE 207

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>RHO_MYCBO (P66029) Transcription termination factor rho (EC 3.6.1.-)|
           (ATP-dependent helicase rho)
          Length = 602

 Score = 35.8 bits (81), Expect = 0.053
 Identities = 24/52 (46%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
 Frame = +3

Query: 27  RTNDADDHGSGDGQADGREDHRG--DAEARGGPHRRRLRDPQVPAVRRRRGD 176
           R  DA     GD QA G +  RG  D EAR G   RR RD      RRRRG+
Sbjct: 162 RGTDAGGDQGGDQQASGGQQARGDEDGEARQGRRGRRFRD------RRRRGE 207

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>ZF64A_HUMAN (Q9NPA5) Zinc finger protein 64, isoforms 1 and 2 (Zinc finger|
           protein 338)
          Length = 681

 Score = 34.3 bits (77), Expect = 0.15
 Identities = 34/149 (22%), Positives = 62/149 (41%), Gaps = 13/149 (8%)
 Frame = +1

Query: 16  EPSVEQTTPTTMGLAMAKLMVG----------KIIV--ETPKHEVVHTGDGYEIRKYPPC 159
           +PS +  TP T+G     L             KIIV  + P+   +       +   PP 
Sbjct: 466 DPSKQPATPLTVGHLQVPLQPSQVPQFSEGRVKIIVGHQVPQANTIVQAAAAAVNIVPPA 525

Query: 160 VAAEVTYDPKEMKGDRDGGFQVLANYIGAFGKPQNTK-PAEAIAMTAPVITSSSSGSGEA 336
           + A+   +P+E+ G+     Q+L   +     PQ+++ P+EA AMT P +  ++    + 
Sbjct: 526 LVAQ---NPEELPGN--SRLQILRQ-VSLIAPPQSSRCPSEAGAMTQPAVLLTTHEQTDG 579

Query: 337 EPIAMTAPVITSSEPEPVAMTVPVLTAEG 423
             +  T     S  P+  +     +T+ G
Sbjct: 580 ATLHQTLIPTASGGPQEGSGNQTFITSSG 608

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>HEMH_MYCAV (O07401) Ferrochelatase (EC 4.99.1.1) (Protoheme ferro-lyase) (Heme|
           synthetase)
          Length = 335

 Score = 33.9 bits (76), Expect = 0.20
 Identities = 19/39 (48%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = +3

Query: 63  GQADGREDHRGDAEARGGPHRRRL-RDPQVPAVRRRRGD 176
           G AD R   R D  A G P   RL R PQ+ A+RRR G+
Sbjct: 50  GVADQRHQPRADRAAAGRPEPARLLRQPQLGALRRRHGE 88

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>HEBP2_HUMAN (Q9Y5Z4) Heme-binding protein 2 (Protein SOUL) (Placental protein|
           23) (PP23)
          Length = 205

 Score = 32.3 bits (72), Expect = 0.58
 Identities = 32/107 (29%), Positives = 44/107 (41%), Gaps = 5/107 (4%)
 Frame = +1

Query: 133 YEIRKYPPCVAAEVTYDPKEMKGDRDGGFQVLANYIGAFGKPQNTKPAEAIAMTAPVITS 312
           YEIR Y P      + +  +       GF  L +YI    + +N K  + I MTAPV + 
Sbjct: 38  YEIRHYGPAKWVSTSVESMDWDSAIQTGFTKLNSYI----QGKNEKEMK-IKMTAPVTSY 92

Query: 313 SSSGSGEAEPIAMTAPVITSSE-----PEPVAMTVPVLTAEGREEQT 438
              GSG      +T  +   SE     P P+   V +   E R E T
Sbjct: 93  VEPGSGPFSESTITISLYIPSEQQFDPPRPLESDVFI---EDRAEMT 136

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>PLS_STAES (Q8CQD9) Accumulation-associated protein precursor|
          Length = 1469

 Score = 32.0 bits (71), Expect = 0.76
 Identities = 47/170 (27%), Positives = 64/170 (37%), Gaps = 29/170 (17%)
 Frame = +1

Query: 34   TTPTTMG-LAMAKLMVGKI---IVETPKHEVVHTGDGYEIRKYPPCVAAEVTYDPKEMKG 201
            TTPTT   L   K+  G+    + + P  E+VH G G EI+        +  +DP   KG
Sbjct: 875  TTPTTKNPLTGEKVGEGEPTEKVTKQPVDEIVHYG-GEEIKP-----GHKDEFDPNAPKG 928

Query: 202  DRDGGFQVLANYIGAFGKPQNTKPAEAIAMTAPVITSSSSGSGEAEPIAMT--------- 354
             ++             GKP    P     +T PV   +  G  + +PI  T         
Sbjct: 929  SQED----------VPGKPGVKNPDTGEVVTPPVDDVTKYGPVDGDPITSTEEIPFDKKR 978

Query: 355  ------AP----VITSSEPEPVAMTVPV----LTAE--GREEQTGKVTMQ 456
                  AP    V+   EP    +T P     LT E  G  E T K+T Q
Sbjct: 979  EFDPNLAPGTEKVVQKGEPGTKTITTPTTKNPLTGEKVGEGEPTEKITKQ 1028



 Score = 30.4 bits (67), Expect = 2.2
 Identities = 48/170 (28%), Positives = 63/170 (37%), Gaps = 29/170 (17%)
 Frame = +1

Query: 34   TTPTTMG-LAMAKLMVGKI---IVETPKHEVVHTGDGYEIRKYPPCVAAEVTYDPKEMKG 201
            TTPTT   L   K+  G+    I + P  E+VH G G EI+        +  +DP   KG
Sbjct: 1003 TTPTTKNPLTGEKVGEGEPTEKITKQPVDEIVHYG-GEEIKP-----GHKDEFDPNAPKG 1056

Query: 202  DRDGGFQVLANYIGAFGKPQNTKPAEAIAMTAPVITSSSSGSGEAEPIAMT--------- 354
             +              GKP    P     +T PV   +  G  + +PI  T         
Sbjct: 1057 SQTT----------QPGKPGVKNPDTGEVVTPPVDDVTKYGPVDGDPITSTEEIPFDKKR 1106

Query: 355  ------AP----VITSSEPEPVAMTVPV----LTAE--GREEQTGKVTMQ 456
                  AP    V+   EP    +T P     LT E  G  E T K+T Q
Sbjct: 1107 EFDPNLAPGTEKVVQKGEPGTKTITTPTTKNPLTGEKVGEGEPTEKITKQ 1156



 Score = 29.6 bits (65), Expect = 3.8
 Identities = 47/170 (27%), Positives = 61/170 (35%), Gaps = 29/170 (17%)
 Frame = +1

Query: 34   TTPTTMG-LAMAKLMVGKI---IVETPKHEVVHTGDGYEIRKYPPCVAAEVTYDPKEMKG 201
            TTPTT   L   K+  G+    I + P  E+VH G G EI+        +  +DP   KG
Sbjct: 747  TTPTTKNPLTGEKVGEGEPTEKITKQPVDEIVHYG-GEEIKP-----GHKDEFDPNAPKG 800

Query: 202  DRDGGFQVLANYIGAFGKPQNTKPAEAIAMTAPVITSSSSGSGEAEPIAMTAP------- 360
             ++             GKP    P     +T PV   +  G  + +PI  T         
Sbjct: 801  SQED----------VPGKPGVKNPDTGEVVTPPVDDVTKYGPVDGDPITSTEEIPFDKKR 850

Query: 361  ------------VITSSEPEPVAMTVPV----LTAE--GREEQTGKVTMQ 456
                        V    EP    +T P     LT E  G  E T KVT Q
Sbjct: 851  EFNPDLKPGEERVKQKGEPGTKTITTPTTKNPLTGEKVGEGEPTEKVTKQ 900



 Score = 28.5 bits (62), Expect = 8.4
 Identities = 46/177 (25%), Positives = 60/177 (33%), Gaps = 30/177 (16%)
 Frame = +1

Query: 16  EPSVEQTTPTTMGLAMAKLMVGK-----IIVETPKHEVVHTGDGYEIRKYPPCVAAEVTY 180
           EP +E TT  T         VG+      I + P  E+VH G G EI+        +  +
Sbjct: 484 EPGIETTTTPTYVNPNTGEKVGEGTPTTKITKQPVDEIVHYG-GEEIKP-----GHKDEF 537

Query: 181 DPKEMKGDRDGGFQVLANYIGAFGKPQNTKPAEAIAMTAPVITSSSSGSGEAEPIAMTAP 360
           DP   KG +              GKP    P     +T PV   +  G  + +PI  T  
Sbjct: 538 DPNAPKGSQTT----------QPGKPGVKNPDTGEVVTPPVDDVTKYGPVDGDPITSTEE 587

Query: 361 -------------------VITSSEPEPVAMTVPV----LTAE--GREEQTGKVTMQ 456
                              V    EP    +T P     LT E  G  E T K+T Q
Sbjct: 588 IPFDKKREFNPDLKPGEERVKQKGEPGTKTITTPTTKNPLTGEKVGEGEPTEKITKQ 644

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>ADRM1_MOUSE (Q9JKV1) Adhesion-regulating molecule 1 precursor (110 kDa cell|
           membrane glycoprotein) (Gp110) (ARM-1)
          Length = 407

 Score = 32.0 bits (71), Expect = 0.76
 Identities = 15/54 (27%), Positives = 28/54 (51%)
 Frame = +1

Query: 226 LANYIGAFGKPQNTKPAEAIAMTAPVITSSSSGSGEAEPIAMTAPVITSSEPEP 387
           LA+ +G+ G P ++  + + + +A V  SSS+ S  A P        +++ P P
Sbjct: 191 LASLLGSSGPPASSSSSSSRSQSAAVTPSSSTSSARATPAPSAPAAASATSPSP 244

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>GRA6_TOXGO (Q27003) Dense granule protein 6 (Protein GRA 6) (Antigen p32)|
           (Protein p33)
          Length = 230

 Score = 31.6 bits (70), Expect = 0.99
 Identities = 25/81 (30%), Positives = 34/81 (41%), Gaps = 4/81 (4%)
 Frame = +1

Query: 211 GGFQVLANYIGAFGKPQNTKPA----EAIAMTAPVITSSSSGSGEAEPIAMTAPVITSSE 378
           GG  V A+  G    P  T  +    EA+  T   + SS+ G G+ + +A      TS  
Sbjct: 38  GGVAVAADSGGVKQTPSETGSSGGQQEAVGTTEDYVNSSAMGGGQGDSLA--EDDTTSEA 95

Query: 379 PEPVAMTVPVLTAEGREEQTG 441
            E      PVL  EG+ E  G
Sbjct: 96  AEGDVDPFPVLANEGKSEARG 116

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>IF35_MOUSE (Q9DCH4) Eukaryotic translation initiation factor 3 subunit 5|
           (eIF-3 epsilon) (eIF3 p47 subunit) (eIF3f)
          Length = 361

 Score = 31.6 bits (70), Expect = 0.99
 Identities = 19/61 (31%), Positives = 29/61 (47%)
 Frame = +1

Query: 256 PQNTKPAEAIAMTAPVITSSSSGSGEAEPIAMTAPVITSSEPEPVAMTVPVLTAEGREEQ 435
           P N  PA A A  APV+T++ + +      A T     ++ P PV+ + P + A     Q
Sbjct: 7   PANVPPATAAAAPAPVVTAAPASAPTPSTPAPTPAATPAASPAPVS-SDPAVAAPAAPGQ 65

Query: 436 T 438
           T
Sbjct: 66  T 66

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>TNR8_HUMAN (P28908) Tumor necrosis factor receptor superfamily member 8|
           precursor (CD30L receptor) (Lymphocyte activation
           antigen CD30) (KI-1 antigen)
          Length = 595

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
 Frame = +1

Query: 148 YPPCVAAEVTYDPKEMKGDRDGGFQV--LANYIGAFGKPQNTKPAEAIAMTAPVITSSSS 321
           YP C A  VT  P++M  ++D  F+   L         P+N +   + + T  ++  S +
Sbjct: 303 YPICAAETVT-KPQDM-AEKDTTFEAPPLGTQPDCNPTPENGEAPASTSPTQSLLVDSQA 360

Query: 322 GSGEAEPIAMTAPVITSSEPEPVAMTVPVL 411
              +  PI  +APV  SS  +PV    PVL
Sbjct: 361 S--KTLPIPTSAPVALSSTGKPVLDAGPVL 388

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>LRC50_HUMAN (Q8NEP3) Leucine-rich repeat-containing protein 50|
          Length = 725

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 16/46 (34%), Positives = 22/46 (47%)
 Frame = +1

Query: 253 KPQNTKPAEAIAMTAPVITSSSSGSGEAEPIAMTAPVITSSEPEPV 390
           +P+ T PAE + +++PV      G GE E    T P      P PV
Sbjct: 411 EPEGTLPAETLLLSSPVEVKGEDGDGEPEG---TLPAEAPPPPPPV 453



 Score = 28.5 bits (62), Expect = 8.4
 Identities = 30/99 (30%), Positives = 38/99 (38%), Gaps = 14/99 (14%)
 Frame = +1

Query: 184 PKEMKGDRDGGFQVLANYIGAFGKPQNTKPAEAIAMTAPVITSSSSGSGE------AEPI 345
           P E+KG+ DG            G+P+ T PAEA     PV      G  E      AE +
Sbjct: 426 PVEVKGE-DGD-----------GEPEGTLPAEAPPPPPPVEVKGEDGDQEPEGTLPAETL 473

Query: 346 AMTAPVITSS-----EPE---PVAMTVPVLTAEGREEQT 438
            ++ PV         EPE   P     P+     REE T
Sbjct: 474 LLSPPVKVKGEDGDREPEGTLPAEAPPPLPLGAAREEPT 512

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>NDF4_XENLA (P79920) Neurogenic differentiation factor 4 (NeuroD4) (Atonal|
           protein homolog 3) (Helix-loop-helix protein xATH-3)
           (XATH3)
          Length = 315

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 13/43 (30%), Positives = 24/43 (55%)
 Frame = +3

Query: 42  DDHGSGDGQADGREDHRGDAEARGGPHRRRLRDPQVPAVRRRR 170
           ++ GS DG+ D  E+  G+   + GP ++++   +V   R RR
Sbjct: 38  EERGSIDGEEDDEEEEDGEKPKKRGPKKKKMTKARVERFRVRR 80

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>IF2_BORBR (Q7WHG2) Translation initiation factor IF-2|
          Length = 997

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 17/59 (28%), Positives = 26/59 (44%)
 Frame = +1

Query: 253 KPQNTKPAEAIAMTAPVITSSSSGSGEAEPIAMTAPVITSSEPEPVAMTVPVLTAEGRE 429
           +PQ+ +PA+A A   P   + +    + EP    AP    +EP   A  V V   E  +
Sbjct: 162 EPQSEQPAQAEAQPEPTPAAQAEPEPQPEPQPEAAPAQAVAEPVEPAKNVSVTETEAEQ 220

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>RDRP_TCV (P17460) Probable RNA-directed RNA polymerase (EC 2.7.7.48)|
           (Protein p88) [Contains: Protein p28]
          Length = 775

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
 Frame = -3

Query: 380 GSEEVITGAVM-AIGSASPLPEEEEVMTG--AVMAIASAGLVFCGLPK 246
           G+EE  T  ++ A+GS + +P       G  A+ A+ +A L FCG+PK
Sbjct: 96  GTEEEATSCLVEAVGSTADVPRRRVRQKGRFAMHAVNAAKLHFCGVPK 143

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>AN32A_RAT (P49911) Acidic leucine-rich nuclear phosphoprotein 32 family|
           member A (Leucine-rich acidic nuclear protein)
          Length = 247

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = +3

Query: 36  DADDHGSGDGQADGREDHRGDAEARGGPHRRRLRDPQ 146
           + D+ G  DG+ D  ED    AE  G   R+R  D +
Sbjct: 206 EEDEEGYNDGEVDDEEDEEDAAEEEGSQKRKREPDDE 242

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>IF2_BORPE (Q7VYR2) Translation initiation factor IF-2|
          Length = 997

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 17/59 (28%), Positives = 25/59 (42%)
 Frame = +1

Query: 253 KPQNTKPAEAIAMTAPVITSSSSGSGEAEPIAMTAPVITSSEPEPVAMTVPVLTAEGRE 429
           +PQ  +PA+A A   P   + +    + EP    AP    +EP   A  V V   E  +
Sbjct: 162 EPQPEQPAQAEAQPEPTPAAQAEPEPQPEPQPEAAPAQAVAEPVEPAKNVSVTETEAEQ 220

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>PMP20_CHLPN (Q9Z812) Probable outer membrane protein pmp20 precursor|
           (Polymorphic membrane protein 20)
          Length = 1723

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 13/34 (38%), Positives = 23/34 (67%)
 Frame = +1

Query: 277 EAIAMTAPVITSSSSGSGEAEPIAMTAPVITSSE 378
           +A + TAPV++SS++ +  A P A  APV  +++
Sbjct: 534 KAASNTAPVVSSSTTAASPAVPAAAAAPVTNAAK 567

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>CS021_HUMAN (Q8IVT2) Protein C19orf21|
          Length = 679

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 17/47 (36%), Positives = 22/47 (46%)
 Frame = +1

Query: 241 GAFGKPQNTKPAEAIAMTAPVITSSSSGSGEAEPIAMTAPVITSSEP 381
           GAFGKP +   AEA A T+P  T S     E+    ++     S  P
Sbjct: 442 GAFGKPSSLSTAEAKAATSPKATMSPRHLSESSGKPLSTKQEASKPP 488

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>IF2_BORPA (Q7W9A5) Translation initiation factor IF-2|
          Length = 969

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 17/59 (28%), Positives = 25/59 (42%)
 Frame = +1

Query: 253 KPQNTKPAEAIAMTAPVITSSSSGSGEAEPIAMTAPVITSSEPEPVAMTVPVLTAEGRE 429
           +PQ  +PA+A A   P   + +    + EP    AP    +EP   A  V V   E  +
Sbjct: 134 EPQPEQPAQAEAQPEPTPAAQAEPEPQPEPQPEAAPAQAVAEPVEPAKNVSVTETEAEQ 192

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>MCL1_CANFA (Q8HYS5) Induced myeloid leukemia cell differentiation protein|
           Mcl-1 homolog
          Length = 350

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 22/97 (22%), Positives = 40/97 (41%)
 Frame = +1

Query: 151 PPCVAAEVTYDPKEMKGDRDGGFQVLANYIGAFGKPQNTKPAEAIAMTAPVITSSSSGSG 330
           PPC A+     P+EM+G            +  + +P+      A+     ++  +SSG G
Sbjct: 101 PPCRASP----PEEMEGPAADAIMSPEEELDGY-EPEPLGKRPAVLPLLELVGEASSGPG 155

Query: 331 EAEPIAMTAPVITSSEPEPVAMTVPVLTAEGREEQTG 441
               +  T P     E E    ++ +++   RE+ TG
Sbjct: 156 MDGSLPSTPPPAEEEEDELYRQSLEIISRYLREQATG 192

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>TNNI3_CAEEL (Q9XUN9) Troponin I 3 (TnI 3)|
          Length = 260

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = +1

Query: 331 EAEPIAMTAPVITSSEPEPVAMTVPVLTAEGREEQ 435
           EA P+ + APV   +EPEP A        E  EE+
Sbjct: 219 EAAPVELAAPVEPEAEPEPEAAEPAAEEPEAEEEE 253

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>YHT1_YEAST (P38835) PH domain protein YHR131C|
          Length = 850

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = +3

Query: 30  TNDADDHGSGDGQADGREDHRGD 98
           T DA+DHG  DG  D  ED   D
Sbjct: 794 TKDAEDHGEDDGDGDDGEDDDDD 816

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>RL15_BUCAK (P46185) 50S ribosomal protein L15|
          Length = 144

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 16/38 (42%), Positives = 19/38 (50%)
 Frame = +3

Query: 51  GSGDGQADGREDHRGDAEARGGPHRRRLRDPQVPAVRR 164
           GSG G+  GR  H+G     GG  RR     Q+P  RR
Sbjct: 24  GSGLGKTGGR-GHKGQKSRSGGGVRRGFEGGQIPLYRR 60

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>PANK1_HUMAN (Q8TE04) Pantothenate kinase 1 (EC 2.7.1.33) (Pantothenic acid|
           kinase 1) (hPanK1) (hPanK)
          Length = 598

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +3

Query: 63  GQADGREDHRGDAEARGGPHRRRLRDPQVPAVR 161
           G A G +      E+ GG   RR+R PQ PA+R
Sbjct: 68  GPARGGQGAEEVGESAGGGEERRVRHPQAPALR 100

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>IF2_DEIRA (Q9RTG5) Translation initiation factor IF-2|
          Length = 597

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 18/82 (21%), Positives = 36/82 (43%)
 Frame = +1

Query: 187 KEMKGDRDGGFQVLANYIGAFGKPQNTKPAEAIAMTAPVITSSSSGSGEAEPIAMTAPVI 366
           K++  D     ++L     ++    +T   E + +   ++   ++  G+A P A +AP  
Sbjct: 11  KDLGVDNHKMLEILDGLGVSYKSVSSTIDEENVEIIKQILADEAAEGGDAAPAAASAPAA 70

Query: 367 TSSEPEPVAMTVPVLTAEGREE 432
            ++EPE    T P   A+   E
Sbjct: 71  ATAEPEEADET-PAAAAQADAE 91

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>PI5PA_HUMAN (Q15735) Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A (EC|
           3.1.3.56)
          Length = 1006

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 32/104 (30%), Positives = 45/104 (43%), Gaps = 7/104 (6%)
 Frame = -3

Query: 449 VTLPVCSSRPSAVRTGTVMATGSGSEEVITGAVMAIGSASPLPEEEEVMTGAVMAIASAG 270
           +  P+C+  P   +T T   + S +   +   VM   SAS  P+     TG+V+A  S G
Sbjct: 85  ILAPLCT--PEGQKTATAHRSSSLAPTSVGQLVM---SASAGPKPPPATTGSVLAPTSLG 139

Query: 269 LVF---CGLPKAPM*LARTWNPPSR----SPFISLGS*VTSAAT 159
           LV     G    P+ L     P SR     P  S+G   T AA+
Sbjct: 140 LVMPASAGPRSPPVTLGPNLAPTSRDQKQEPPASVGPKPTLAAS 183

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>SODC_MYCPA (Q9AGW2) Superoxide dismutase [Cu-Zn] precursor (EC 1.15.1.1)|
          Length = 227

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
 Frame = +1

Query: 223 VLANYIGAFGKPQNTKPAEAIAMTAPVITSSS---SGSGEAEPIAMTAPVITSSEPEP 387
           VLA  + A G   + + A ++  T P + + S   SG+G AE     AP IT+    P
Sbjct: 9   VLAGCVVALGACSSPQHASSLPGTTPAVWTGSPSPSGAGAAEAAPAAAPSITTHLKAP 66

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>YQU3_CAEEL (Q09550) Hypothetical protein F26C11.3 precursor|
          Length = 1317

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 19/73 (26%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
 Frame = +1

Query: 238 IGAFGKPQNTKPAEAIAMTAPVITSSSSGSGEAEPIAMTAPVITSSEPEPVA-MTVPVLT 414
           + +  K + ++   + + T P  ++S+S S  + P+A T+   T+S+  P +  TVP  +
Sbjct: 340 VSSVQKTRTSEDKPSSSTTVPT-SASTSESSTSSPMAETSSSSTTSQSSPASTSTVPESS 398

Query: 415 AEGREEQTGKVTM 453
             G    TG  T+
Sbjct: 399 TVGSTPTTGLTTL 411

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>SYTL4_HUMAN (Q96C24) Synaptotagmin-like protein 4 (Exophilin-2) (Granuphilin)|
          Length = 671

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 18/49 (36%), Positives = 21/49 (42%)
 Frame = +1

Query: 79  GKIIVETPKHEVVHTGDGYEIRKYPPCVAAEVTYDPKEMKGDRDGGFQV 225
           GKI  E+P     H G+     KY P     V  D K+ KG   G  QV
Sbjct: 482 GKISAESPTGLPSHKGELVVSLKYIPASKTPVGGDRKKSKGGEGGELQV 530

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>MYPT1_HUMAN (O14974) Protein phosphatase 1 regulatory subunit 12A (Myosin|
           phosphatase-targeting subunit 1) (Myosin phosphatase
           target subunit 1) (Protein phosphatase myosin-binding
           subunit)
          Length = 1030

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 9/30 (30%), Positives = 21/30 (70%)
 Frame = +1

Query: 304 ITSSSSGSGEAEPIAMTAPVITSSEPEPVA 393
           +T++++ S +A P+A+T P ++S +  P +
Sbjct: 380 VTNANTSSTQAAPVAVTTPTVSSGQATPTS 409

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>METB_ARATH (P55217) Cystathionine gamma-synthase, chloroplast precursor (EC|
           2.5.1.48) (CGS) (O-succinylhomoserine (thiol)-lyase)
          Length = 563

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 20/63 (31%), Positives = 29/63 (46%)
 Frame = +1

Query: 265 TKPAEAIAMTAPVITSSSSGSGEAEPIAMTAPVITSSEPEPVAMTVPVLTAEGREEQTGK 444
           T  A A++  A    +SS+    A P+A   PV+  S  E V     V+  EG  E+ G 
Sbjct: 110 TSSASAVSSAASAAAASSAA---AAPVAAAPPVVLKSVDEEV-----VVAEEGIREKIGS 161

Query: 445 VTM 453
           V +
Sbjct: 162 VQL 164

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>MASY_STRAE (P77947) Malate synthase (EC 2.3.3.9)|
          Length = 543

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = -3

Query: 350 MAIGSASPLPEEEEVMTGAVMAIAS 276
           +AI  A PLP +EEV+T A +A  +
Sbjct: 9   LAIVDAEPLPRQEEVLTDAALAFVA 33

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>IF2_BRUSU (Q8FXT2) Translation initiation factor IF-2|
          Length = 959

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
 Frame = +3

Query: 63  GQADGREDHRGDAEARGGPHRRRLRDPQVPAVR--RRRGDL 179
           GQ+D  +D R DA  RG   +  +R P+V      RRRG L
Sbjct: 297 GQSDDDDDRRSDAARRGVAAKPEVRAPKVVKGEDDRRRGKL 337

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>RL15_SHIFL (P66075) 50S ribosomal protein L15|
          Length = 144

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 16/38 (42%), Positives = 19/38 (50%)
 Frame = +3

Query: 51  GSGDGQADGREDHRGDAEARGGPHRRRLRDPQVPAVRR 164
           GSG G+  GR  H+G     GG  RR     Q+P  RR
Sbjct: 24  GSGLGKTGGR-GHKGQKSRSGGGVRRGFEGGQMPLYRR 60

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>RL15_SALTY (P66073) 50S ribosomal protein L15|
          Length = 144

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 16/38 (42%), Positives = 19/38 (50%)
 Frame = +3

Query: 51  GSGDGQADGREDHRGDAEARGGPHRRRLRDPQVPAVRR 164
           GSG G+  GR  H+G     GG  RR     Q+P  RR
Sbjct: 24  GSGLGKTGGR-GHKGQKSRSGGGVRRGFEGGQMPLYRR 60

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>RL15_SALTI (P66074) 50S ribosomal protein L15|
          Length = 144

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 16/38 (42%), Positives = 19/38 (50%)
 Frame = +3

Query: 51  GSGDGQADGREDHRGDAEARGGPHRRRLRDPQVPAVRR 164
           GSG G+  GR  H+G     GG  RR     Q+P  RR
Sbjct: 24  GSGLGKTGGR-GHKGQKSRSGGGVRRGFEGGQMPLYRR 60

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>RL15_SALPA (Q5PK03) 50S ribosomal protein L15|
          Length = 144

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 16/38 (42%), Positives = 19/38 (50%)
 Frame = +3

Query: 51  GSGDGQADGREDHRGDAEARGGPHRRRLRDPQVPAVRR 164
           GSG G+  GR  H+G     GG  RR     Q+P  RR
Sbjct: 24  GSGLGKTGGR-GHKGQKSRSGGGVRRGFEGGQMPLYRR 60

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>RL15_SALCH (Q57J51) 50S ribosomal protein L15|
          Length = 144

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 16/38 (42%), Positives = 19/38 (50%)
 Frame = +3

Query: 51  GSGDGQADGREDHRGDAEARGGPHRRRLRDPQVPAVRR 164
           GSG G+  GR  H+G     GG  RR     Q+P  RR
Sbjct: 24  GSGLGKTGGR-GHKGQKSRSGGGVRRGFEGGQMPLYRR 60

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>RL15_PHOLL (Q7MYH0) 50S ribosomal protein L15|
          Length = 144

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 16/38 (42%), Positives = 19/38 (50%)
 Frame = +3

Query: 51  GSGDGQADGREDHRGDAEARGGPHRRRLRDPQVPAVRR 164
           GSG G+  GR  H+G     GG  RR     Q+P  RR
Sbjct: 24  GSGLGKTGGR-GHKGQKSRSGGGVRRGFEGGQMPLYRR 60

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>RL15_PASMU (Q9CL49) 50S ribosomal protein L15|
          Length = 144

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 16/38 (42%), Positives = 19/38 (50%)
 Frame = +3

Query: 51  GSGDGQADGREDHRGDAEARGGPHRRRLRDPQVPAVRR 164
           GSG G+  GR  H+G     GG  RR     Q+P  RR
Sbjct: 24  GSGLGKTGGR-GHKGQKSRTGGGVRRGFEGGQMPLYRR 60

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>RL15_MANSM (Q65QX4) 50S ribosomal protein L15|
          Length = 144

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 16/38 (42%), Positives = 19/38 (50%)
 Frame = +3

Query: 51  GSGDGQADGREDHRGDAEARGGPHRRRLRDPQVPAVRR 164
           GSG G+  GR  H+G     GG  RR     Q+P  RR
Sbjct: 24  GSGLGKTGGR-GHKGQKSRTGGGVRRGFEGGQMPLYRR 60

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>RL15_HAEIN (P44353) 50S ribosomal protein L15|
          Length = 144

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 16/38 (42%), Positives = 19/38 (50%)
 Frame = +3

Query: 51  GSGDGQADGREDHRGDAEARGGPHRRRLRDPQVPAVRR 164
           GSG G+  GR  H+G     GG  RR     Q+P  RR
Sbjct: 24  GSGLGKTGGR-GHKGQKSRTGGGVRRGFEGGQMPLYRR 60

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>RL15_HAEDU (Q7VKF2) 50S ribosomal protein L15|
          Length = 144

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 16/38 (42%), Positives = 19/38 (50%)
 Frame = +3

Query: 51  GSGDGQADGREDHRGDAEARGGPHRRRLRDPQVPAVRR 164
           GSG G+  GR  H+G     GG  RR     Q+P  RR
Sbjct: 24  GSGLGKTGGR-GHKGQKSRTGGGVRRGFEGGQMPLYRR 60

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>RL15_ECOLI (P02413) 50S ribosomal protein L15|
          Length = 144

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 16/38 (42%), Positives = 19/38 (50%)
 Frame = +3

Query: 51  GSGDGQADGREDHRGDAEARGGPHRRRLRDPQVPAVRR 164
           GSG G+  GR  H+G     GG  RR     Q+P  RR
Sbjct: 24  GSGLGKTGGR-GHKGQKSRSGGGVRRGFEGGQMPLYRR 60

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>RL15_ECOL6 (P66071) 50S ribosomal protein L15|
          Length = 144

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 16/38 (42%), Positives = 19/38 (50%)
 Frame = +3

Query: 51  GSGDGQADGREDHRGDAEARGGPHRRRLRDPQVPAVRR 164
           GSG G+  GR  H+G     GG  RR     Q+P  RR
Sbjct: 24  GSGLGKTGGR-GHKGQKSRSGGGVRRGFEGGQMPLYRR 60

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>RL15_ECO57 (P66072) 50S ribosomal protein L15|
          Length = 144

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 16/38 (42%), Positives = 19/38 (50%)
 Frame = +3

Query: 51  GSGDGQADGREDHRGDAEARGGPHRRRLRDPQVPAVRR 164
           GSG G+  GR  H+G     GG  RR     Q+P  RR
Sbjct: 24  GSGLGKTGGR-GHKGQKSRSGGGVRRGFEGGQMPLYRR 60

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>NELFA_DROME (Q86NP2) Negative elongation factor A homolog|
          Length = 1248

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 31/140 (22%), Positives = 49/140 (35%), Gaps = 4/140 (2%)
 Frame = +1

Query: 1   RGTSAEPSVEQTTPTTMGLAMAKLMVGKIIVETPKHEVVHTGDGYEIRKYPPCVAAEVTY 180
           R T   PS    T TT+            +   P +  V         K     AA  T 
Sbjct: 521 RATGVSPSTSVGTTTTLLTPQQLRQAANPLANLPNNISVKITSA----KAKAAAAAAATS 576

Query: 181 DPKEMKGDRDGGFQVLANYIGAFGKPQNTKPAEAIAMTAPVITSSSSGSGEAEPIAM--- 351
              + +  +    QV          PQ + P   I  + PVI +SS  +  A+ +A+   
Sbjct: 577 SGSQTQSQQPQTLQVQQ-------APQQSHPPLLINSSTPVILASSPSAQRAKALALPSS 629

Query: 352 -TAPVITSSEPEPVAMTVPV 408
            T+   T++ P     T+P+
Sbjct: 630 STSATTTTTIPSQAIKTMPL 649


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.309    0.127    0.354 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,768,361
Number of Sequences: 219361
Number of extensions: 819173
Number of successful extensions: 3193
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 2975
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3187
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2851757076
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result