Clone Information

BLAST Search Result

Clone Name	baal14g06
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	GLI2_HUMAN (P10070) Zinc finger protein GLI2 (Tax helper protein)	33	0.22
2	IF2_CORGL (Q8NP40) Translation initiation factor IF-2	32	0.49
3	MSPD1_RAT (Q5RJS6) Motile sperm domain-containing protein 1	31	0.64
4	MSPD1_MOUSE (Q8VEL0) Motile sperm domain-containing protein 1	31	0.64
5	IF2_COREF (Q8FPA7) Translation initiation factor IF-2	31	0.84
6	PUR1_PYRHO (O57979) Amidophosphoribosyltransferase precursor (EC...	30	1.1
7	MYO3A_HUMAN (Q8NEV4) Myosin IIIA (EC 2.7.11.1)	30	1.1
8	COT1_HUMAN (P10589) COUP transcription factor 1 (COUP-TF1) (COUP...	30	1.1
9	SYV_LEGPL (Q5WYI0) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--t...	30	1.1
10	SYV_LEGPH (Q5ZXL2) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--t...	30	1.1
11	SYV_LEGPA (Q5X728) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--t...	30	1.1
12	IRK14_HUMAN (Q9UNX9) ATP-sensitive inward rectifier potassium ch...	30	1.1
13	IF2_PROAC (Q6A7M5) Translation initiation factor IF-2	30	1.4
14	TONB_NEIMC (P95374) Protein tonB	30	1.4
15	MYSC_CHICK (P29616) Myosin heavy chain, cardiac muscle isoform (...	30	1.9
16	MURG_NEIG1 (Q5F6L8) UDP-N-acetylglucosamine--N-acetylmuramyl-(pe...	30	1.9
17	PRP5_YARLI (Q6CCZ1) Pre-mRNA-processing ATP-dependent RNA helica...	30	1.9
18	LAMB1_DROME (P11046) Laminin beta-1 chain precursor (Laminin B1 ...	29	2.4
19	IF3A_HUMAN (Q14152) Eukaryotic translation initiation factor 3 s...	29	2.4
20	BCN1_MOUSE (O88597) Beclin-1 (Coiled-coil myosin-like BCL2-inter...	29	2.4
21	YHI1_MYCTU (P0A5B5) Hypothetical HIT-like protein Rv0759c/MT0784	29	2.4
22	YHI1_MYCBO (P0A5B6) Hypothetical HIT-like protein Mb0782c	29	2.4
23	MURG_NEIMB (Q9K0Y2) UDP-N-acetylglucosamine--N-acetylmuramyl-(pe...	29	2.4
24	MURG_NEIMA (Q9JSZ7) UDP-N-acetylglucosamine--N-acetylmuramyl-(pe...	29	2.4
25	MFP1_ARATH (Q9LW85) MAR binding filament-like protein 1	29	3.2
26	AF9_ASPFU (Q4WPM8) Protein AF-9 homolog	29	3.2
27	IF3A_MOUSE (P23116) Eukaryotic translation initiation factor 3 s...	29	3.2
28	COBA2_MOUSE (Q64739) Collagen alpha-2(XI) chain precursor	29	3.2
29	YSC6_STRGC (P42359) Hypothetical zinc metalloproteinase in scaA ...	29	3.2
30	MYH3_CHICK (P02565) Myosin heavy chain, fast skeletal muscle, em...	29	3.2
31	MYSS_CHICK (P13538) Myosin heavy chain, skeletal muscle, adult	28	4.2
32	RPOC_WEIPA (P96178) DNA-directed RNA polymerase beta' chain (EC ...	28	4.2
33	MYH3_RAT (P12847) Myosin heavy chain, fast skeletal muscle, embr...	28	4.2
34	MYH3_HUMAN (P11055) Myosin heavy chain, fast skeletal muscle, em...	28	4.2
35	NADB_CAUCR (Q9A4C3) L-aspartate oxidase (EC 1.4.3.16) (LASPO) (Q...	28	5.5
36	YA2G_SCHPO (Q09706) Hypothetical protein C2F7.16c in chromosome I	28	5.5
37	ORC1_CRIGR (Q9JI69) Origin recognition complex subunit 1	28	5.5
38	IPP1_RABIT (P01099) Protein phosphatase inhibitor 1 (IPP-1) (I-1)	28	7.1
39	COBA1_HUMAN (P12107) Collagen alpha-1(XI) chain precursor	28	7.1
40	SIA1_CAEEL (Q965X6) Ubiquitin ligase sia-1 (EC 6.3.2.-) (Seven i...	28	7.1
41	COT1_MOUSE (Q60632) COUP transcription factor 1 (COUP-TF1) (COUP...	28	7.1
42	PTDSR_DROME (Q9VD28) Protein PSR	28	7.1
43	MYH8_HUMAN (P13535) Myosin-8 (Myosin heavy chain, skeletal muscl...	28	7.1
44	YHI1_MYCLE (P49774) Hypothetical HIT-like protein ML2237	27	9.3
45	MYH7_PIG (P79293) Myosin heavy chain, cardiac muscle beta isofor...	27	9.3
46	MYH6_HUMAN (P13533) Myosin heavy chain, cardiac muscle alpha iso...	27	9.3
47	MYH4_MOUSE (Q5SX39) Myosin-4 (Myosin heavy chain, skeletal muscl...	27	9.3
48	MYH1_HUMAN (P12882) Myosin-1 (Myosin heavy chain, skeletal muscl...	27	9.3
49	MYH6_MOUSE (Q02566) Myosin heavy chain, cardiac muscle alpha iso...	27	9.3
50	MYH13_HUMAN (Q9UKX3) Myosin-13 (Myosin heavy chain, skeletal mus...	27	9.3
51	NECD_HUMAN (Q99608) Necdin	27	9.3
52	SYW_STRMU (Q8DRR1) Tryptophanyl-tRNA synthetase (EC 6.1.1.2) (Tr...	27	9.3
53	CSF1_RAT (Q8JZQ0) Macrophage colony-stimulating factor 1 precurs...	27	9.3
54	SYW_LACLA (Q9CJD1) Tryptophanyl-tRNA synthetase (EC 6.1.1.2) (Tr...	27	9.3
55	DMD_PIG (Q5GN48) Dystrophin	27	9.3
56	BRE1B_RAT (Q8CJB9) Ubiquitin-protein ligase BRE1B (EC 6.3.2.-) (...	27	9.3
57	RUVB_RHOBA (Q7UPG4) Holliday junction ATP-dependent DNA helicase...	27	9.3
58	BRE1B_PONPY (Q5RAU7) Ubiquitin-protein ligase BRE1B (EC 6.3.2.-)...	27	9.3
59	BRE1B_MACFA (Q4R7K7) Ubiquitin-protein ligase BRE1B (EC 6.3.2.-)...	27	9.3
60	BRE1B_HUMAN (O75150) Ubiquitin-protein ligase BRE1B (EC 6.3.2.-)...	27	9.3
61	COT1_BOVIN (Q9TTR8) COUP transcription factor 1 (COUP-TF1) (COUP...	27	9.3
62	MYH1_MOUSE (Q5SX40) Myosin-1 (Myosin heavy chain, skeletal muscl...	27	9.3
63	DMD_MOUSE (P11531) Dystrophin	27	9.3

>GLI2_HUMAN (P10070) Zinc finger protein GLI2 (Tax helper protein)|
          Length = 1258

 Score = 32.7 bits (73), Expect = 0.22
 Identities = 22/84 (26%), Positives = 32/84 (38%), Gaps = 8/84 (9%)
 Frame = +1

Query: 106  EPGGLDPNDGAADRKGSGDGTAEQEEVLGPGRTRTHSGQRTAQLRIPXGERRGHG----- 270
            +PG ++P  G      +G G  +    L P  T  H G R  Q ++      GH      
Sbjct: 1020 QPGFMEPQTGPMGVATAGFGLVQPRPPLEPSPTGRHRGVRAVQQQLAYARATGHAMAAMP 1079

Query: 271  ---ESAEEAQGGP*RNLDAHPVLP 333
               E+AE    G   N+ + P  P
Sbjct: 1080 SSQETAEAVPKGAMGNMGSVPPQP 1103

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>IF2_CORGL (Q8NP40) Translation initiation factor IF-2|
          Length = 1004

 Score = 31.6 bits (70), Expect = 0.49
 Identities = 24/65 (36%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
 Frame = +1

Query: 109 PGGLDPNDGAADRKGSGDGT-AEQEEVLGPGRTRTHSGQRTAQLRIPXGERRGHGESAEE 285
           PGG    DG  D +  G G    Q +  G G  R   G R      P G  R  G SA+ 
Sbjct: 245 PGG--QRDGQRDGQRDGQGNRGGQRQGAGAGGPRPQGGPR------PQGGSRPQGGSAQG 296

Query: 286 AQGGP 300
           AQG P
Sbjct: 297 AQGAP 301

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>MSPD1_RAT (Q5RJS6) Motile sperm domain-containing protein 1|
          Length = 213

 Score = 31.2 bits (69), Expect = 0.64
 Identities = 19/59 (32%), Positives = 32/59 (54%)
 Frame = +2

Query: 158 ETARQNKKKCLDLAERARTLANVLPSYGYPXVKDEDTERVLRRLKEALDETLTLIQSCQ 334
           + + Q+++K L    R   +A +LPS      K++  E   +R+KE L E++   QSCQ
Sbjct: 98  QVSEQSQRKALG---RKEVIATLLPS-----AKEQQKEEEEKRIKEHLTESVFFEQSCQ 148

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>MSPD1_MOUSE (Q8VEL0) Motile sperm domain-containing protein 1|
          Length = 213

 Score = 31.2 bits (69), Expect = 0.64
 Identities = 19/59 (32%), Positives = 32/59 (54%)
 Frame = +2

Query: 158 ETARQNKKKCLDLAERARTLANVLPSYGYPXVKDEDTERVLRRLKEALDETLTLIQSCQ 334
           + + Q+++K L    R   +A +LPS      K++  E   +R+KE L E++   QSCQ
Sbjct: 98  QVSEQSQRKALG---RKEVIATLLPS-----AKEQQKEEEEKRIKEHLTESVFFEQSCQ 148

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>IF2_COREF (Q8FPA7) Translation initiation factor IF-2|
          Length = 964

 Score = 30.8 bits (68), Expect = 0.84
 Identities = 23/62 (37%), Positives = 25/62 (40%), Gaps = 7/62 (11%)
 Frame = +1

Query: 133 GAADRKGSGDGTAEQEEVLGP---GRTRTHSGQRTAQLRI----PXGERRGHGESAEEAQ 291
           GAADR G   G        GP   G  R   GQR+   R     P G+R G G      Q
Sbjct: 194 GAADRPGPRPGGGGPRPGGGPRPGGAPRPQGGQRSGAPRDGQGGPRGQRPGPGSGGPRPQ 253

Query: 292 GG 297
           GG
Sbjct: 254 GG 255

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>PUR1_PYRHO (O57979) Amidophosphoribosyltransferase precursor (EC 2.4.2.14)|
           (Glutamine phosphoribosylpyrophosphate amidotransferase)
           (ATASE) (GPATase)
          Length = 449

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
 Frame = +1

Query: 211 HSGQRTAQLRIPXGERR---GHGESAEEAQGGP*RNLDAHPVLPDCKY 345
           H GQ  A + +  G+ R   GHG  +E  +GG  R L+ +PV+   +Y
Sbjct: 33  HRGQEGAGISVWDGDIRTVKGHGLVSEVFKGGSIRRLNGNPVIGHVRY 80

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>MYO3A_HUMAN (Q8NEV4) Myosin IIIA (EC 2.7.11.1)|
          Length = 1616

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 27/99 (27%), Positives = 43/99 (43%)
 Frame = +2

Query: 59   LVEHSELDRLEMIDPLSLVGLILTMVQLIAKEAETARQNKKKCLDLAERARTLANVLPSY 238
            ++E + + RL     +     I     L  K +E  R +   C  + E+A  L N     
Sbjct: 977  ILETARIRRLGFSHRILFANFIKRYYLLCYKSSEEPRMSPDTCATILEKAG-LDNWALGK 1035

Query: 239  GYPXVKDEDTERVLRRLKEALDETLTLIQSCQTVSICSR 355
                +K    E++    KEA+D+ L LIQ+C    +CSR
Sbjct: 1036 TKVFLKYYHVEQLNLMRKEAIDK-LILIQACVRAFLCSR 1073

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>COT1_HUMAN (P10589) COUP transcription factor 1 (COUP-TF1) (COUP-TF I)|
           (V-ERBA-related protein EAR-3)
          Length = 423

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 21/64 (32%), Positives = 28/64 (43%)
 Frame = +1

Query: 109 PGGLDPNDGAADRKGSGDGTAEQEEVLGPGRTRTHSGQRTAQLRIPXGERRGHGESAEEA 288
           PGG  PN  A   +G G G  EQ++  G G    H+ Q   Q   P       G + ++ 
Sbjct: 20  PGG--PNPAAQAARGGGGGAGEQQQQAGSG--APHTPQTPGQPGAPATP----GTAGDKG 71

Query: 289 QGGP 300
           QG P
Sbjct: 72  QGPP 75

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>SYV_LEGPL (Q5WYI0) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)|
            (ValRS)
          Length = 921

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 25/101 (24%), Positives = 45/101 (44%), Gaps = 11/101 (10%)
 Frame = +2

Query: 32   EATAQSHRRLVEHSELDRLEMIDP-----------LSLVGLILTMVQLIAKEAETARQNK 178
            E  A+  + L   S++D++  + P           L  + L++ M  LI KEAE +R NK
Sbjct: 805  ERIAKYEKILKTLSKIDKINYLAPDEKVPVSATAVLGEIELLIPMADLIDKEAELSRLNK 864

Query: 179  KKCLDLAERARTLANVLPSYGYPXVKDEDTERVLRRLKEAL 301
                +LA+  + +         P   D+  E ++ + K+ L
Sbjct: 865  ----ELAKLNKDIELAQGKLNNPKFTDKAPEEIIAKEKDKL 901

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>SYV_LEGPH (Q5ZXL2) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)|
            (ValRS)
          Length = 921

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 25/101 (24%), Positives = 45/101 (44%), Gaps = 11/101 (10%)
 Frame = +2

Query: 32   EATAQSHRRLVEHSELDRLEMIDP-----------LSLVGLILTMVQLIAKEAETARQNK 178
            E  A+  + L   S++D++  + P           L  + L++ M  LI KEAE +R NK
Sbjct: 805  ERIAKYEKILKTLSKIDKINYLAPDEKVPVSATAVLGEIELLIPMADLIDKEAELSRLNK 864

Query: 179  KKCLDLAERARTLANVLPSYGYPXVKDEDTERVLRRLKEAL 301
                +LA+  + +         P   D+  E ++ + K+ L
Sbjct: 865  ----ELAKLNKDIELAQGKLNNPKFTDKAPEEIIAKEKDKL 901

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>SYV_LEGPA (Q5X728) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)|
            (ValRS)
          Length = 921

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 25/101 (24%), Positives = 45/101 (44%), Gaps = 11/101 (10%)
 Frame = +2

Query: 32   EATAQSHRRLVEHSELDRLEMIDP-----------LSLVGLILTMVQLIAKEAETARQNK 178
            E  A+  + L   S++D++  + P           L  + L++ M  LI KEAE +R NK
Sbjct: 805  ERIAKYEKILKTLSKIDKINYLAPDEKVPVSATAVLGEIELLIPMADLIDKEAELSRLNK 864

Query: 179  KKCLDLAERARTLANVLPSYGYPXVKDEDTERVLRRLKEAL 301
                +LA+  + +         P   D+  E ++ + K+ L
Sbjct: 865  ----ELAKLNKDIELAQGKLNNPKFTDKAPEEIIAKEKDKL 901

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>IRK14_HUMAN (Q9UNX9) ATP-sensitive inward rectifier potassium channel 14|
           (Potassium channel, inwardly rectifying subfamily J
           member 14) (Inward rectifier K(+) channel Kir2.4) (IRK4)
          Length = 436

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 20/44 (45%), Positives = 23/44 (52%)
 Frame = +1

Query: 133 GAADRKGSGDGTAEQEEVLGPGRTRTHSGQRTAQLRIPXGERRG 264
           GA D   SGD  A  EE  GPG  R  +G   A ++ P G RRG
Sbjct: 12  GALD---SGDSRAGDEEEAGPGLCR--NGWAPAPVQSPVGRRRG 50

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>IF2_PROAC (Q6A7M5) Translation initiation factor IF-2|
          Length = 964

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
 Frame = +1

Query: 124 PNDGAADRKGS---GDGTAEQEEVLGPGRTRTHSGQRTAQLRIPXGERRGHGESAEEAQG 294
           P  GA  R G+   G+      + +G  R R+  GQR+   R   GER      ++ ++G
Sbjct: 199 PRPGAGRRTGAPRPGNNPFASSQGMGQSRHRSEGGQRSGGSRSGQGERMPRPGGSQGSRG 258

Query: 295 G 297
           G
Sbjct: 259 G 259

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>TONB_NEIMC (P95374) Protein tonB|
          Length = 278

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
 Frame = +1

Query: 124 PNDGAADRKGSGDGTAEQEEVLGP--GRTRTHSGQRTAQLRIPXGERRGHGESAEEAQGG 297
           P++  A+   +    A+ E+  G   G  R  +G+  A + +  G +  HGE A  ++G 
Sbjct: 137 PSEKPAEHPSNASAKADSEQGNGEETGTKRDGTGRGEAAVNVSVGVKGEHGEGAGSSKGN 196

Query: 298 P*R 306
           P R
Sbjct: 197 PLR 199

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>MYSC_CHICK (P29616) Myosin heavy chain, cardiac muscle isoform (Fragment)|
          Length = 1102

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 20/96 (20%), Positives = 45/96 (46%), Gaps = 5/96 (5%)
 Frame = +2

Query: 53   RRLVEHSELDRLEMIDPL-----SLVGLILTMVQLIAKEAETARQNKKKCLDLAERARTL 217
            R+L EH  L+  E ++ L     SL+     +   I++      ++ ++C +  ++A+  
Sbjct: 865  RKLAEHELLEATERVNLLHTQNTSLINQKKKLEGDISQMQNEVEESIQECRNAEQKAKKA 924

Query: 218  ANVLPSYGYPXVKDEDTERVLRRLKEALDETLTLIQ 325
                        K++DT   L R+K+ +++T+  +Q
Sbjct: 925  ITDAAMMAEELKKEQDTSAHLERMKKNMEQTIKDLQ 960

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>MURG_NEIG1 (Q5F6L8) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)|
           pyrophosphoryl-undecaprenol N-acetylglucosamine
           transferase (EC 2.4.1.227)
           (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc
           transferase)
          Length = 355

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
 Frame = +2

Query: 116 GLILTMVQLIAKEAET--ARQNKKKCLDLAERARTLA 220
           GL+L   QL A++        N++KCL  AE ARTLA
Sbjct: 302 GLLLPQTQLTAEKLAEILGSLNREKCLKWAENARTLA 338

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>PRP5_YARLI (Q6CCZ1) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC|
           3.6.1.-)
          Length = 974

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 14/51 (27%), Positives = 26/51 (50%)
 Frame = +1

Query: 145 RKGSGDGTAEQEEVLGPGRTRTHSGQRTAQLRIPXGERRGHGESAEEAQGG 297
           RK +  G  +++   G       +G++ A+L    GE+ G G+S  + +GG
Sbjct: 196 RKATDQGQVKRKMFFGGDSDEEDAGRKPAKLLKKLGEKEGSGKSEGKGRGG 246

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>LAMB1_DROME (P11046) Laminin beta-1 chain precursor (Laminin B1 chain)|
          Length = 1790

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 27/75 (36%), Positives = 34/75 (45%), Gaps = 8/75 (10%)
 Frame = +2

Query: 143  IAKEAETARQNKKKCLDLAERARTLANVLPSYGYPXVKD--EDTERVLR------RLKEA 298
            +AK+AETA  +KK   D   RA T A +  S  Y   K   E +ER L       +L E 
Sbjct: 1447 VAKDAETAITSKKDQADQTIRALTQAKLNASEAYEKAKRGFEQSERYLNQTNANIKLAEN 1506

Query: 299  LDETLTLIQSCQTVS 343
            L   L   Q  +T S
Sbjct: 1507 LFIALNNFQENKTAS 1521

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>IF3A_HUMAN (Q14152) Eukaryotic translation initiation factor 3 subunit 10|
           (eIF-3 theta) (eIF3 p167) (eIF3 p180) (eIF3 p185)
           (eIF3a)
          Length = 1382

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 21/99 (21%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
 Frame = +2

Query: 74  ELDRLEMIDPLSLVGLILTMVQLIAKEAETARQNKKKCLDLAERARTLANVLPSYGYPXV 253
           +++ LE +DP  ++   +  ++   KE +   +N++K +D  ERA+ L  +      P +
Sbjct: 657 DIEDLEELDPDFIMAKQVEQLEKEKKELQERLKNQEKKIDYFERAKRLEEI------PLI 710

Query: 254 KDEDTERVLRRL---KEALDETLTLIQSCQTVSICSRNR 361
           K    E+ ++ +   ++  +E +T +Q  +  ++  +NR
Sbjct: 711 KSAYEEQRIKDMDLWEQQEEERITTMQLEREKALEHKNR 749

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>BCN1_MOUSE (O88597) Beclin-1 (Coiled-coil myosin-like BCL2-interacting|
           protein)
          Length = 448

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 21/69 (30%), Positives = 33/69 (47%)
 Frame = +2

Query: 158 ETARQNKKKCLDLAERARTLANVLPSYGYPXVKDEDTERVLRRLKEALDETLTLIQSCQT 337
           E   QN K+CL++ E+               + ++D+E++ R LKE   E   LIQ  + 
Sbjct: 154 ENECQNYKRCLEILEQ---------------MNEDDSEQLQRELKELALEEERLIQELED 198

Query: 338 VSICSRNRK 364
           V    +NRK
Sbjct: 199 V---EKNRK 204

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>YHI1_MYCTU (P0A5B5) Hypothetical HIT-like protein Rv0759c/MT0784|
          Length = 133

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 14/40 (35%), Positives = 24/40 (60%)
 Frame = +2

Query: 32  EATAQSHRRLVEHSELDRLEMIDPLSLVGLILTMVQLIAK 151
           E   Q H  +V  +E+D  + +DP +L G ++++ QLI K
Sbjct: 30  EPMTQGHTLVVPRAEIDHWQNVDP-ALFGRVMSVSQLIGK 68

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>YHI1_MYCBO (P0A5B6) Hypothetical HIT-like protein Mb0782c|
          Length = 133

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 14/40 (35%), Positives = 24/40 (60%)
 Frame = +2

Query: 32  EATAQSHRRLVEHSELDRLEMIDPLSLVGLILTMVQLIAK 151
           E   Q H  +V  +E+D  + +DP +L G ++++ QLI K
Sbjct: 30  EPMTQGHTLVVPRAEIDHWQNVDP-ALFGRVMSVSQLIGK 68

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>MURG_NEIMB (Q9K0Y2) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)|
           pyrophosphoryl-undecaprenol N-acetylglucosamine
           transferase (EC 2.4.1.227)
           (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc
           transferase)
          Length = 355

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
 Frame = +2

Query: 116 GLILTMVQLIAKEAET--ARQNKKKCLDLAERARTLA 220
           GL+L   QL A++        N++KCL  AE ARTLA
Sbjct: 302 GLLLPQTQLTAEKLAEILGGLNREKCLKWAENARTLA 338

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>MURG_NEIMA (Q9JSZ7) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)|
           pyrophosphoryl-undecaprenol N-acetylglucosamine
           transferase (EC 2.4.1.227)
           (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc
           transferase)
          Length = 355

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
 Frame = +2

Query: 116 GLILTMVQLIAKEAET--ARQNKKKCLDLAERARTLA 220
           GL+L   QL A++        N++KCL  AE ARTLA
Sbjct: 302 GLLLPQTQLTAEKLAEILGGLNREKCLKWAENARTLA 338

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>MFP1_ARATH (Q9LW85) MAR binding filament-like protein 1|
          Length = 726

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 21/86 (24%), Positives = 39/86 (45%), Gaps = 5/86 (5%)
 Frame = +2

Query: 62  VEHSELDRLEMIDP-----LSLVGLILTMVQLIAKEAETARQNKKKCLDLAERARTLANV 226
           ++H + +R + ++      LSL+  + +   L+ +        KK C  L ++  +L N 
Sbjct: 183 LQHEQEERKKEVEKAKEEQLSLINQLNSAKDLVTELGRELSSEKKLCEKLKDQIESLENS 242

Query: 227 LPSYGYPXVKDEDTERVLRRLKEALD 304
           L   G      ED E +  +L+E LD
Sbjct: 243 LSKAG------EDKEALETKLREKLD 262

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>AF9_ASPFU (Q4WPM8) Protein AF-9 homolog|
          Length = 272

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 20/64 (31%), Positives = 29/64 (45%)
 Frame = +2

Query: 32  EATAQSHRRLVEHSELDRLEMIDPLSLVGLILTMVQLIAKEAETARQNKKKCLDLAERAR 211
           E     + R  E+ ELDRLE  +         T+ Q+I +E E   + +KK  +L E   
Sbjct: 213 ETPENPYSRTTENKELDRLEAANK--------TVEQMIKEERERLIEREKKLAELRESEG 264

Query: 212 TLAN 223
             AN
Sbjct: 265 IPAN 268

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>IF3A_MOUSE (P23116) Eukaryotic translation initiation factor 3 subunit 10|
           (eIF-3 theta) (eIF3 p167) (eIF3 p180) (eIF3 p185)
           (eIF3a) (p162 protein) (Centrosomin)
          Length = 1344

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 18/67 (26%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
 Frame = +2

Query: 74  ELDRLEMIDPLSLVGLILTMVQLIAKEAETARQNKKKCLDLAERARTLAN---VLPSYGY 244
           +++ LE +DP  ++   +  ++   KE +   +N++K +D  ERA+ L     +  +Y  
Sbjct: 657 DIEDLEELDPDFIMAKQVEQLEKEKKELQERLKNQEKKIDYFERAKRLEEIPLIKSAYEE 716

Query: 245 PXVKDED 265
             VKD D
Sbjct: 717 QRVKDMD 723

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>COBA2_MOUSE (Q64739) Collagen alpha-2(XI) chain precursor|
          Length = 1736

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 19/64 (29%), Positives = 28/64 (43%)
 Frame = +1

Query: 109  PGGLDPNDGAADRKGSGDGTAEQEEVLGPGRTRTHSGQRTAQLRIPXGERRGHGESAEEA 288
            P G D   G+    G+     E+ E   PG + +   Q    ++ P GER   GES +  
Sbjct: 1190 PNGADGPQGSPGGVGNLGPPGEKGE---PGESGSPGVQGEPGVKGPRGERGEKGESGQAG 1246

Query: 289  QGGP 300
            + GP
Sbjct: 1247 EAGP 1250

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>YSC6_STRGC (P42359) Hypothetical zinc metalloproteinase in scaA 5'region (EC|
           3.4.24.-) (ORF6) (Fragment)
          Length = 564

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
 Frame = +2

Query: 122 ILTMVQLIAKEAETARQNKKKCLDLAERARTLANVLPSY-GYPXVKDEDTERVLRRLKEA 298
           ++TM+++         QN     +  ++A    NV+  Y GYP   DE  ER  R++   
Sbjct: 344 VVTMIEVYKNRLA---QNDWLTPETRDKAIVKLNVIKPYIGYP---DELPERYSRKI--- 394

Query: 299 LDETLTLIQSCQTVSI 346
           +DE LTL ++ Q +S+
Sbjct: 395 VDENLTLFENAQKLSL 410

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>MYH3_CHICK (P02565) Myosin heavy chain, fast skeletal muscle, embryonic|
          Length = 1940

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 8/106 (7%)
 Frame = +2

Query: 32   EATAQSHRRLVEHSELDRLEMIDPLSL--VGLILTMVQL------IAKEAETARQNKKKC 187
            E T +S R++ E   LD  E +  L      LI T  +L      I  E E   Q  +  
Sbjct: 1698 EQTERS-RKVAEQELLDASERVQLLHTQNTSLINTKKKLESDISQIQSEMEDTIQEARNA 1756

Query: 188  LDLAERARTLANVLPSYGYPXVKDEDTERVLRRLKEALDETLTLIQ 325
             + A++A T A ++        K++DT   L R+K+ LD+T+  +Q
Sbjct: 1757 EEKAKKAITDAAMMAE---ELKKEQDTSAHLERMKKNLDQTVKDLQ 1799

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>MYSS_CHICK (P13538) Myosin heavy chain, skeletal muscle, adult|
          Length = 1938

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 8/105 (7%)
 Frame = +2

Query: 23   GGGEATAQSHRRLVEHSELDRLEMIDPLSL--VGLILTMVQL------IAKEAETARQNK 178
            G  E T +S R++ E   LD  E +  L      LI T  +L      I  E E   Q  
Sbjct: 1692 GALEQTERS-RKVAEQELLDATERVQLLHTQNTSLINTKKKLETDIVQIQSEMEDTIQEA 1750

Query: 179  KKCLDLAERARTLANVLPSYGYPXVKDEDTERVLRRLKEALDETL 313
            +   + A++A T A ++        K++DT   L R+K+ +D+T+
Sbjct: 1751 RNAEEKAKKAITDAAMMAE---ELKKEQDTSAHLERMKKNMDQTV 1792

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>RPOC_WEIPA (P96178) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP|
            beta' subunit) (Transcriptase beta' chain) (RNA
            polymerase beta' subunit) (Fragment)
          Length = 1054

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 15/56 (26%), Positives = 26/56 (46%)
 Frame = +1

Query: 184  VLGPGRTRTHSGQRTAQLRIPXGERRGHGESAEEAQGGP*RNLDAHPVLPDCKYML 351
            + G   TRT++   TA++R+  G+R   GE+  E    P   +     L    Y++
Sbjct: 928  IQGETDTRTYTLPMTARMRVGEGDRIHRGETLNEGSADPKEIIQVRDTLATENYIV 983

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>MYH3_RAT (P12847) Myosin heavy chain, fast skeletal muscle, embryonic|
          Length = 1940

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 8/99 (8%)
 Frame = +2

Query: 53   RRLVEHSELDRLEMIDPLSL--VGLILTMVQL------IAKEAETARQNKKKCLDLAERA 208
            R+L E   LD  E +  L      LI T  +L      +  E E A ++ +   + A++A
Sbjct: 1700 RKLAEQELLDSNERVQLLHTQNTSLIHTKKKLETDLTQLQSEVEDASRDARNAEEKAKKA 1759

Query: 209  RTLANVLPSYGYPXVKDEDTERVLRRLKEALDETLTLIQ 325
             T A ++        K++DT   L R+K+ L++T+  +Q
Sbjct: 1760 ITDAAMMAE---ELKKEQDTSAHLERMKKNLEQTVKDLQ 1795

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>MYH3_HUMAN (P11055) Myosin heavy chain, fast skeletal muscle, embryonic (Muscle|
            embryonic myosin heavy chain) (SMHCE)
          Length = 1940

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 8/99 (8%)
 Frame = +2

Query: 53   RRLVEHSELDRLEMIDPLSL--VGLILTMVQL------IAKEAETARQNKKKCLDLAERA 208
            R+L E   LD  E +  L      LI T  +L      +  E E A ++ +   + A++A
Sbjct: 1700 RKLAEQELLDSNERVQLLHTQNTSLIHTKKKLETDLMQLQSEVEDASRDARNAEEKAKKA 1759

Query: 209  RTLANVLPSYGYPXVKDEDTERVLRRLKEALDETLTLIQ 325
             T A ++        K++DT   L R+K+ L++T+  +Q
Sbjct: 1760 ITDAAMMAE---ELKKEQDTSAHLERMKKNLEQTVKDLQ 1795

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>NADB_CAUCR (Q9A4C3) L-aspartate oxidase (EC 1.4.3.16) (LASPO) (Quinolinate|
           synthetase B)
          Length = 511

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = +1

Query: 250 GERRGHGESAEEAQGGP*RNLDAHPVLPD 336
           G R G   +AE A GGP  +L+  P LPD
Sbjct: 389 GARAGRAAAAEGATGGPPVSLEPLPDLPD 417

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>YA2G_SCHPO (Q09706) Hypothetical protein C2F7.16c in chromosome I|
          Length = 1369

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = +1

Query: 121  DPNDGAADRKGSGDGTAEQEEVLGPGRTRTHSGQRTAQLRIPXGERRG 264
            DP +  A  +GSG+ +A ++      +TRT++G +    R+     RG
Sbjct: 1286 DPKNPKAGSQGSGNTSASEDSKTEKPKTRTNNGLQVPDKRVVYDLLRG 1333

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>ORC1_CRIGR (Q9JI69) Origin recognition complex subunit 1|
          Length = 850

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 17/71 (23%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
 Frame = +2

Query: 134 VQLIAKEAETARQNKKKCLDLAERARTLANVLPSYGYPXVKDEDTERVLRRLKEALDET- 310
           +QL+A++      + ++CLD+  RA  +  +  ++G     +      +  L EA+DE  
Sbjct: 694 IQLVARKVAALSGDARRCLDICRRATEICELSHNHG-----NSLGPVTVSHLMEAIDEMF 748

Query: 311 ----LTLIQSC 331
               +T I++C
Sbjct: 749 SSSYITAIKNC 759

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>IPP1_RABIT (P01099) Protein phosphatase inhibitor 1 (IPP-1) (I-1)|
          Length = 166

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 16/63 (25%), Positives = 27/63 (42%)
 Frame = +1

Query: 106 EPGGLDPNDGAADRKGSGDGTAEQEEVLGPGRTRTHSGQRTAQLRIPXGERRGHGESAEE 285
           EP G     GA + +  G      E  LGP  T     Q + + +   GE     +++++
Sbjct: 100 EPEGAAEGTGAQESQPPGTPGTGAESRLGPSATAQKPAQPSPRAQERRGEEPSTAKTSQD 159

Query: 286 AQG 294
           +QG
Sbjct: 160 SQG 162

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>COBA1_HUMAN (P12107) Collagen alpha-1(XI) chain precursor|
          Length = 1806

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 20/64 (31%), Positives = 23/64 (35%)
 Frame = +1

Query: 109  PGGLDPNDGAADRKGSGDGTAEQEEVLGPGRTRTHSGQRTAQLRIPXGERRGHGESAEEA 288
            P G D   G     GS  G  E+ E   PG          A +  P GER   GE+    
Sbjct: 1232 PNGADGPQGPPGSVGSVGGVGEKGE---PGEAGNPGPPGEAGVGGPKGERGEKGEAGPPG 1288

Query: 289  QGGP 300
              GP
Sbjct: 1289 AAGP 1292

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>SIA1_CAEEL (Q965X6) Ubiquitin ligase sia-1 (EC 6.3.2.-) (Seven in absentia|
           homolog 1)
          Length = 339

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = -3

Query: 234 LGSTLARVRARSARSKHFFLFCRAVSASFAISCTIVRIKPT 112
           LG T+ARV++    S  FFL  R V+    + C I + + T
Sbjct: 18  LGKTMARVQSNPPGSSEFFLIFRTVT----LKCKIFQYRTT 54

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>COT1_MOUSE (Q60632) COUP transcription factor 1 (COUP-TF1) (COUP-TF I)|
          Length = 422

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 20/64 (31%), Positives = 26/64 (40%)
 Frame = +1

Query: 109 PGGLDPNDGAADRKGSGDGTAEQEEVLGPGRTRTHSGQRTAQLRIPXGERRGHGESAEEA 288
           PGG  PN  A   +G G G  EQ++    G    H+ Q   Q   P       G   ++ 
Sbjct: 20  PGG--PNPAAQAARGGGGGAGEQQQA---GSGAPHTPQTPGQPGAPATP----GTQGDKG 70

Query: 289 QGGP 300
           QG P
Sbjct: 71  QGPP 74

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>PTDSR_DROME (Q9VD28) Protein PSR|
          Length = 408

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 16/63 (25%), Positives = 27/63 (42%)
 Frame = +1

Query: 121 DPNDGAADRKGSGDGTAEQEEVLGPGRTRTHSGQRTAQLRIPXGERRGHGESAEEAQGGP 300
           D +  ++    S   ++E+EE    G + T SGQ +   +     R   G S   + GG 
Sbjct: 346 DSSSNSSSSSSSSSSSSEEEESDDGGDSNTDSGQESLTAKKKKKRRMAGGGSGSGSMGGS 405

Query: 301 *RN 309
            R+
Sbjct: 406 SRS 408

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>MYH8_HUMAN (P13535) Myosin-8 (Myosin heavy chain, skeletal muscle, perinatal)|
            (MyHC-perinatal)
          Length = 1937

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 8/106 (7%)
 Frame = +2

Query: 32   EATAQSHRRLVEHSELDRLEMIDPLSL--VGLILTMVQL------IAKEAETARQNKKKC 187
            E T +S R++ E   LD  E +  L      LI T  +L      +  E E   Q  +  
Sbjct: 1696 EQTERS-RKIAEQELLDASERVQLLHTQNTSLINTKKKLENDVSQLQSEVEEVIQESRNA 1754

Query: 188  LDLAERARTLANVLPSYGYPXVKDEDTERVLRRLKEALDETLTLIQ 325
             + A++A T A ++        K++DT   L R+K+ L++T+  +Q
Sbjct: 1755 EEKAKKAITDAAMMAE---ELKKEQDTSAHLERMKKNLEQTVKDLQ 1797

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>YHI1_MYCLE (P49774) Hypothetical HIT-like protein ML2237|
          Length = 134

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 13/40 (32%), Positives = 24/40 (60%)
 Frame = +2

Query: 32  EATAQSHRRLVEHSELDRLEMIDPLSLVGLILTMVQLIAK 151
           E   Q H  +V  +E+D+ + +DP ++ G ++ + QLI K
Sbjct: 31  EPMTQGHTLVVPCAEIDQWQNVDP-AIFGRVIAVSQLIGK 69

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>MYH7_PIG (P79293) Myosin heavy chain, cardiac muscle beta isoform (MyHC-beta)|
          Length = 1935

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 24/96 (25%), Positives = 46/96 (47%), Gaps = 3/96 (3%)
 Frame = +2

Query: 47   SHRRLVEHSELDRLEMIDPLSLVGLILTM---VQLIAKEAETARQNKKKCLDLAERARTL 217
            + + L+E SE  +L      SL+     M   +  +  E E A Q  +   + A++A T 
Sbjct: 1702 AEQELIETSERVQLLHSQNTSLINQKKKMEADLSQLQTEVEEAVQESRNAEEKAKKAITD 1761

Query: 218  ANVLPSYGYPXVKDEDTERVLRRLKEALDETLTLIQ 325
            A ++        K++DT   L R+K+ +++T+  +Q
Sbjct: 1762 AAMMAE---ELKKEQDTSAHLERMKKNMEQTIKDLQ 1794

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>MYH6_HUMAN (P13533) Myosin heavy chain, cardiac muscle alpha isoform|
            (MyHC-alpha)
          Length = 1939

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 19/93 (20%), Positives = 41/93 (44%)
 Frame = +2

Query: 47   SHRRLVEHSELDRLEMIDPLSLVGLILTMVQLIAKEAETARQNKKKCLDLAERARTLANV 226
            + + L+E SE  +L      SL+     M   + +      +  ++C +  E+A+     
Sbjct: 1704 AEQELIETSERVQLLHSQNTSLINQKKKMEADLTQLQSEVEEAVQECRNAEEKAKKAITD 1763

Query: 227  LPSYGYPXVKDEDTERVLRRLKEALDETLTLIQ 325
                     K++DT   L R+K+ +++T+  +Q
Sbjct: 1764 AAMMAEELKKEQDTSAHLERMKKNMEQTIKDLQ 1796

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>MYH4_MOUSE (Q5SX39) Myosin-4 (Myosin heavy chain, skeletal muscle, fetal)|
          Length = 1939

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 8/106 (7%)
 Frame = +2

Query: 32   EATAQSHRRLVEHSELDRLEMIDPL-----SLVGL---ILTMVQLIAKEAETARQNKKKC 187
            E T +S RR+ E   LD  E +  L     SL+     + T +  I  E E   Q  +  
Sbjct: 1697 EQTERS-RRVAEQELLDASERVQLLHTQNTSLINTKKKLETDISQIQGEMEDIVQEARNA 1755

Query: 188  LDLAERARTLANVLPSYGYPXVKDEDTERVLRRLKEALDETLTLIQ 325
             + A++A T A ++        K++DT   L R+K+ +++T+  +Q
Sbjct: 1756 EEKAKKAITDAAMMAE---ELKKEQDTSAHLERMKKNMEQTVKDLQ 1798

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>MYH1_HUMAN (P12882) Myosin-1 (Myosin heavy chain, skeletal muscle, adult 1)|
            (Myosin heavy chain IIx/d) (MyHC-IIx/d)
          Length = 1939

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 8/106 (7%)
 Frame = +2

Query: 32   EATAQSHRRLVEHSELDRLEMIDPL-----SLVGL---ILTMVQLIAKEAETARQNKKKC 187
            E T +S R++ E   LD  E +  L     SL+     + T +  I  E E   Q  +  
Sbjct: 1697 EQTERS-RKIAEQELLDASERVQLLHTQNTSLINTKKKLETDISQIQGEMEDIIQEARNA 1755

Query: 188  LDLAERARTLANVLPSYGYPXVKDEDTERVLRRLKEALDETLTLIQ 325
             + A++A T A ++        K++DT   L R+K+ L++T+  +Q
Sbjct: 1756 EEKAKKAITDAAMMAE---ELKKEQDTSAHLERMKKNLEQTVKDLQ 1798

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>MYH6_MOUSE (Q02566) Myosin heavy chain, cardiac muscle alpha isoform|
            (MyHC-alpha)
          Length = 1938

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 19/93 (20%), Positives = 41/93 (44%)
 Frame = +2

Query: 47   SHRRLVEHSELDRLEMIDPLSLVGLILTMVQLIAKEAETARQNKKKCLDLAERARTLANV 226
            + + L+E SE  +L      SL+     M   + +      +  ++C +  E+A+     
Sbjct: 1704 AEQELIETSERVQLLHSQNTSLINQKKKMESDLTQLQTEVEEAVQECRNAEEKAKKAITD 1763

Query: 227  LPSYGYPXVKDEDTERVLRRLKEALDETLTLIQ 325
                     K++DT   L R+K+ +++T+  +Q
Sbjct: 1764 AAMMAEELKKEQDTSAHLERMKKNMEQTIKDLQ 1796

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>MYH13_HUMAN (Q9UKX3) Myosin-13 (Myosin heavy chain, skeletal muscle, extraocular)|
            (MyHC-eo)
          Length = 1938

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
 Frame = +2

Query: 53   RRLVEHSELDRLEMIDPLSL--VGLILTMVQLIAK------EAETARQNKKKCLDLAERA 208
            RRL E   LD  + +  L      LI T  +L A       E E + Q  +   + A++A
Sbjct: 1703 RRLSEQELLDASDRVQLLHSQNTSLINTKKKLEADIAQCQAEVENSIQESRNAEEKAKKA 1762

Query: 209  RTLANVLPSYGYPXVKDEDTERVLRRLKEALDETLTLIQ 325
             T A ++        K++DT   L R+K+ L++T+  +Q
Sbjct: 1763 ITDAAMMAE---ELKKEQDTSAHLERMKKNLEQTVKDLQ 1798

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>NECD_HUMAN (Q99608) Necdin|
          Length = 321

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 12/40 (30%), Positives = 25/40 (62%)
 Frame = +2

Query: 56  RLVEHSELDRLEMIDPLSLVGLILTMVQLIAKEAETARQN 175
           + +E  ELDR+ + + + + GL+L ++ LI  +   AR++
Sbjct: 169 KALEPEELDRVALSNRMPMTGLLLMILSLIYVKGRGARES 208

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>SYW_STRMU (Q8DRR1) Tryptophanyl-tRNA synthetase (EC 6.1.1.2)|
           (Tryptophan--tRNA ligase) (TrpRS)
          Length = 340

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = +1

Query: 103 VEPGGLDPNDGAADRKGSGDGTAEQEEVLGPG 198
           VEP G+ P + AA R    DG A+  + LG G
Sbjct: 179 VEPEGIYPKNEAAGRLPGLDGNAKMSKSLGNG 210

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>CSF1_RAT (Q8JZQ0) Macrophage colony-stimulating factor 1 precursor (CSF-1)|
           (MCSF)
          Length = 566

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 22/99 (22%), Positives = 44/99 (44%), Gaps = 10/99 (10%)
 Frame = +2

Query: 59  LVEHSELDRLEMIDPLSLVGLILTMVQLIAKEAETARQNKKKCLDLAERARTLANVLPSY 238
           L+E+  +D+ ++ DP+  +     +VQ+I +E    + N     +  ER + L+  L S 
Sbjct: 63  LIEYKFVDQEQLDDPVCYLKKAFVLVQVIIEETMRFKDNTPNA-NATERLQELSMKLNSC 121

Query: 239 GYPXVKD----------EDTERVLRRLKEALDETLTLIQ 325
                K+          E   R+L ++K   +ET   ++
Sbjct: 122 FIKDYKEQNEACVQTYKESPLRLLEKIKNFFNETKNFLE 160

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>SYW_LACLA (Q9CJD1) Tryptophanyl-tRNA synthetase (EC 6.1.1.2)|
           (Tryptophan--tRNA ligase) (TrpRS)
          Length = 341

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = +1

Query: 103 VEPGGLDPNDGAADRKGSGDGTAEQEEVLGPG 198
           VEP G+ P + AA R    DG A+  + LG G
Sbjct: 179 VEPEGIYPENEAAGRLPGLDGNAKMSKSLGNG 210

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>DMD_PIG (Q5GN48) Dystrophin|
          Length = 3674

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 25/94 (26%), Positives = 43/94 (45%)
 Frame = +2

Query: 32   EATAQSHRRLVEHSELDRLEMIDPLSLVGLILTMVQLIAKEAETARQNKKKCLDLAERAR 211
            E   ++ R++V+  + +  + +D   +  L L   +L AK  E  +Q  +KCL L+ + R
Sbjct: 1516 EMVIKTGRQIVQKKQTENPKELDE-RVTALKLHYNELGAKVTER-KQQLEKCLKLSRKMR 1573

Query: 212  TLANVLPSYGYPXVKDEDTERVLRRLKEALDETL 313
               NVL  +    +   DTE   R   E +   L
Sbjct: 1574 KEMNVLTEW----LAATDTELTKRSAVEGMPSNL 1603

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>BRE1B_RAT (Q8CJB9) Ubiquitin-protein ligase BRE1B (EC 6.3.2.-) (BRE1-B) (RING|
           finger protein 40) (Syntaxin-1-interacting RING finger
           protein) (Protein staring)
          Length = 1002

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 33/117 (28%), Positives = 50/117 (42%), Gaps = 9/117 (7%)
 Frame = +2

Query: 35  ATAQSHRRLVEHSELDRLEMIDPL--SLVGLILTMVQLIAKEAETARQNKKKCLDLAERA 208
           A+  SH R +EH E D L +   L   ++ L  T+ Q + KE E  R   ++ L   E+A
Sbjct: 419 ASKNSHLRHIEHMESDELGLQKKLRTEVIQLEDTLAQ-VRKEYEMLRIEFEQNLAANEQA 477

Query: 209 -------RTLANVLPSYGYPXVKDEDTERVLRRLKEALDETLTLIQSCQTVSICSRN 358
                  R L + L ++ +      D +R  R+L+E   E   L       S C  N
Sbjct: 478 GPINREMRHLISSLQNHNHQL--KGDAQRYKRKLREVQAEIGKLRAQASGSSHCGPN 532

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>RUVB_RHOBA (Q7UPG4) Holliday junction ATP-dependent DNA helicase ruvB (EC|
           3.6.1.-)
          Length = 366

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 16/44 (36%), Positives = 21/44 (47%)
 Frame = +1

Query: 106 EPGGLDPNDGAADRKGSGDGTAEQEEVLGPGRTRTHSGQRTAQL 237
           +PGG  P DG    K + DG  E +   GP    T   QR A++
Sbjct: 18  DPGGDPPEDGPPHGKNAADGGDEPDR--GPDPDVTLRPQRMAEM 59

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>BRE1B_PONPY (Q5RAU7) Ubiquitin-protein ligase BRE1B (EC 6.3.2.-) (BRE1-B) (RING|
           finger protein 40)
          Length = 1001

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 9/100 (9%)
 Frame = +2

Query: 35  ATAQSHRRLVEHSELDRLEMIDPL--SLVGLILTMVQLIAKEAETARQNKKKCLDLAERA 208
           AT  SH R +EH E D L +   L   ++ L  T+ Q + KE E  R   ++ L   E+A
Sbjct: 418 ATKNSHLRHIEHMESDELGLQKKLRTEVIQLEDTLAQ-VRKEYEMLRIEFEQNLAANEQA 476

Query: 209 -------RTLANVLPSYGYPXVKDEDTERVLRRLKEALDE 307
                  R L + L ++ +      D +R  R+L+E   E
Sbjct: 477 GPINREMRHLISSLQNHNHQL--KGDAQRYKRKLREVQAE 514

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>BRE1B_MACFA (Q4R7K7) Ubiquitin-protein ligase BRE1B (EC 6.3.2.-) (BRE1-B) (RING|
           finger protein 40)
          Length = 1001

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 9/100 (9%)
 Frame = +2

Query: 35  ATAQSHRRLVEHSELDRLEMIDPL--SLVGLILTMVQLIAKEAETARQNKKKCLDLAERA 208
           AT  SH R +EH E D L +   L   ++ L  T+ Q + KE E  R   ++ L   E+A
Sbjct: 418 ATKNSHLRHIEHMESDELGLQKKLRTEVIQLEDTLAQ-VRKEYEMLRIEFEQNLAANEQA 476

Query: 209 -------RTLANVLPSYGYPXVKDEDTERVLRRLKEALDE 307
                  R L + L ++ +      D +R  R+L+E   E
Sbjct: 477 GPINREMRHLISSLQNHNHQL--KGDAQRYKRKLREVQAE 514

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>BRE1B_HUMAN (O75150) Ubiquitin-protein ligase BRE1B (EC 6.3.2.-) (BRE1-B) (RING|
           finger protein 40) (95 kDa retinoblastoma-associated
           protein) (RBP95)
          Length = 1001

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 9/100 (9%)
 Frame = +2

Query: 35  ATAQSHRRLVEHSELDRLEMIDPL--SLVGLILTMVQLIAKEAETARQNKKKCLDLAERA 208
           AT  SH R +EH E D L +   L   ++ L  T+ Q + KE E  R   ++ L   E+A
Sbjct: 418 ATKNSHLRHIEHMESDELGLQKKLRTEVIQLEDTLAQ-VRKEYEMLRIEFEQNLAANEQA 476

Query: 209 -------RTLANVLPSYGYPXVKDEDTERVLRRLKEALDE 307
                  R L + L ++ +      D +R  R+L+E   E
Sbjct: 477 GPINREMRHLISSLQNHNHQL--KGDAQRYKRKLREVQAE 514

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>COT1_BOVIN (Q9TTR8) COUP transcription factor 1 (COUP-TF1) (COUP-TF I)|
          Length = 424

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 20/64 (31%), Positives = 27/64 (42%)
 Frame = +1

Query: 109 PGGLDPNDGAADRKGSGDGTAEQEEVLGPGRTRTHSGQRTAQLRIPXGERRGHGESAEEA 288
           PGG  PN  A   +G G G  EQ++    G    H+ Q   Q   P       G + ++ 
Sbjct: 20  PGG--PNPAAQAARGGGGGAGEQQQQQA-GSGAPHTPQTPGQPGAPATP----GTAGDKG 72

Query: 289 QGGP 300
           QG P
Sbjct: 73  QGPP 76

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>MYH1_MOUSE (Q5SX40) Myosin-1 (Myosin heavy chain, skeletal muscle, adult 1)|
          Length = 1942

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 8/106 (7%)
 Frame = +2

Query: 32   EATAQSHRRLVEHSELDRLEMIDPL-----SLVGL---ILTMVQLIAKEAETARQNKKKC 187
            E T +S R++ E   LD  E +  L     SL+     + T +  I  E E   Q  +  
Sbjct: 1700 EQTERS-RKIAEQELLDASERVQLLHTQNTSLINTKKKLETDISQIQGEMEDIVQEARNA 1758

Query: 188  LDLAERARTLANVLPSYGYPXVKDEDTERVLRRLKEALDETLTLIQ 325
             + A++A T A ++        K++DT   L R+K+ L++T+  +Q
Sbjct: 1759 EEKAKKAITDAAMMAE---ELKKEQDTSAHLERMKKNLEQTVKDLQ 1801

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>DMD_MOUSE (P11531) Dystrophin|
          Length = 3678

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 25/94 (26%), Positives = 43/94 (45%)
 Frame = +2

Query: 32   EATAQSHRRLVEHSELDRLEMIDPLSLVGLILTMVQLIAKEAETARQNKKKCLDLAERAR 211
            E   ++ R++V+  + +  + +D   +  L L   +L AK  E  +Q  +KCL L+ + R
Sbjct: 1522 EMVIKTGRQIVQKKQTENPKELDE-RVTALKLHYNELGAKVTER-KQQLEKCLKLSRKMR 1579

Query: 212  TLANVLPSYGYPXVKDEDTERVLRRLKEALDETL 313
               NVL  +    +   DTE   R   E +   L
Sbjct: 1580 KEMNVLTEW----LAATDTELTKRSAVEGMPSNL 1609


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,254,971
Number of Sequences: 219361
Number of extensions: 670443
Number of successful extensions: 2649
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 2583
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2643
length of database: 80,573,946
effective HSP length: 98
effective length of database: 59,076,568
effective search space used: 1417837632
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result