ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal14g05 |
|---|---|
| Clone Library Name | barley_pub |
>GLI2_HUMAN (P10070) Zinc finger protein GLI2 (Tax helper protein)| Length = 1258 Score = 33.5 bits (75), Expect = 0.41 Identities = 22/84 (26%), Positives = 32/84 (38%), Gaps = 8/84 (9%) Frame = +1 Query: 133 EPGGLDPNDGAADRKGSGDGTAEQEEVLGPGRTRTHSGQRTAQLRIPCGERRGHG----- 297 +PG ++P G +G G + L P T H G R Q ++ GH Sbjct: 1020 QPGFMEPQTGPMGVATAGFGLVQPRPPLEPSPTGRHRGVRAVQQQLAYARATGHAMAAMP 1079 Query: 298 ---ESAEEAQGGPRRNLDAHPVLP 360 E+AE G N+ + P P Sbjct: 1080 SSQETAEAVPKGAMGNMGSVPPQP 1103
>MSPD1_RAT (Q5RJS6) Motile sperm domain-containing protein 1| Length = 213 Score = 31.2 bits (69), Expect = 2.0 Identities = 19/59 (32%), Positives = 32/59 (54%) Frame = +2 Query: 185 ETARQNKKKCLDLAERARTLANVLPSYGYPAVKDEDTERVLRRLKEALDETLTLIQSCQ 361 + + Q+++K L R +A +LPS K++ E +R+KE L E++ QSCQ Sbjct: 98 QVSEQSQRKALG---RKEVIATLLPS-----AKEQQKEEEEKRIKEHLTESVFFEQSCQ 148
>MSPD1_MOUSE (Q8VEL0) Motile sperm domain-containing protein 1| Length = 213 Score = 31.2 bits (69), Expect = 2.0 Identities = 19/59 (32%), Positives = 32/59 (54%) Frame = +2 Query: 185 ETARQNKKKCLDLAERARTLANVLPSYGYPAVKDEDTERVLRRLKEALDETLTLIQSCQ 361 + + Q+++K L R +A +LPS K++ E +R+KE L E++ QSCQ Sbjct: 98 QVSEQSQRKALG---RKEVIATLLPS-----AKEQQKEEEEKRIKEHLTESVFFEQSCQ 148
>HSP71_PICAN (P53421) Heat-shock protein 70 1 (HSP72)| Length = 644 Score = 30.8 bits (68), Expect = 2.7 Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 10/95 (10%) Frame = +2 Query: 191 ARQNKKKCLDLAERARTLA-NVLPSYGYPAVKDEDTERVLRR---------LKEALDETL 340 A K K D E AR A N L SY Y ++K +E+ L +A++ET+ Sbjct: 519 AEAEKYKEEDEKEAARIAAKNGLESYAY-SLKQTASEKQFEEKVDASKRESLNKAIEETI 577 Query: 341 TLIQSCQTVSICSRNRKAAELDGVNGKINDCIRDL 445 + + + Q+ + K EL+G+ ND ++DL Sbjct: 578 SWLDNNQSATTDEYEDKRKELEGI---ANDALKDL 609
>TONB_NEIMC (P95374) Protein tonB| Length = 278 Score = 30.8 bits (68), Expect = 2.7 Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 2/63 (3%) Frame = +1 Query: 151 PNDGAADRKGSGDGTAEQEEVLGP--GRTRTHSGQRTAQLRIPCGERRGHGESAEEAQGG 324 P++ A+ + A+ E+ G G R +G+ A + + G + HGE A ++G Sbjct: 137 PSEKPAEHPSNASAKADSEQGNGEETGTKRDGTGRGEAAVNVSVGVKGEHGEGAGSSKGN 196 Query: 325 PRR 333 P R Sbjct: 197 PLR 199
>IF2_CORGL (Q8NP40) Translation initiation factor IF-2| Length = 1004 Score = 30.8 bits (68), Expect = 2.7 Identities = 25/72 (34%), Positives = 28/72 (38%) Frame = +1 Query: 136 PGGLDPNDGAADRKGSGDGTAEQEEVLGPGRTRTHSGQRTAQLRIPCGERRGHGESAEEA 315 PGG P G R G G Q G R GQR Q G+R+G G Sbjct: 221 PGG-GPRPGGGPRPGGGPRPQGQGRP-GGQRDGQRDGQRDGQGNRG-GQRQGAGAGGPRP 277 Query: 316 QGGPRRNLDAHP 351 QGGPR + P Sbjct: 278 QGGPRPQGGSRP 289
>PURA_PSYAR (Q4FTX2) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate| ligase) (AdSS) (AMPSase) Length = 429 Score = 30.8 bits (68), Expect = 2.7 Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 6/86 (6%) Frame = +2 Query: 287 EDTERVLRRLKEALDETLT------LIQSCQTVSICSRNRKAAELDGVNGKINDCIRDLN 448 +D E LR L E + LT I +T+ +C ++A + G + D DLN Sbjct: 155 DDLEEKLRNLIEYHNFQLTQYYKVEAIDFDETLKLCQEWKEA-----IRGMVTDVTEDLN 209 Query: 449 FIRNARTNQVAAASSVPAQTYDHGSY 526 +R A N + + DHG+Y Sbjct: 210 QLRLAGKNLMFEGAQGTLLDIDHGTY 235
>SORC3_HUMAN (Q9UPU3) VPS10 domain-containing receptor SorCS3 precursor| Length = 1222 Score = 30.4 bits (67), Expect = 3.5 Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 6/51 (11%) Frame = +1 Query: 217 GPGRTRTHSGQRTAQLRI------PCGERRGHGESAEEAQGGPRRNLDAHP 351 GP G R ++++ P GERRG G A GG RR+ A P Sbjct: 86 GPELLPQQGGGRGGEMQVEAGGTSPAGERRGRGIPAPAKLGGARRSRRAQP 136
>COT1_HUMAN (P10589) COUP transcription factor 1 (COUP-TF1) (COUP-TF I)| (V-ERBA-related protein EAR-3) Length = 423 Score = 30.4 bits (67), Expect = 3.5 Identities = 21/64 (32%), Positives = 28/64 (43%) Frame = +1 Query: 136 PGGLDPNDGAADRKGSGDGTAEQEEVLGPGRTRTHSGQRTAQLRIPCGERRGHGESAEEA 315 PGG PN A +G G G EQ++ G G H+ Q Q P G + ++ Sbjct: 20 PGG--PNPAAQAARGGGGGAGEQQQQAGSG--APHTPQTPGQPGAPATP----GTAGDKG 71 Query: 316 QGGP 327 QG P Sbjct: 72 QGPP 75
>SYV_LEGPL (Q5WYI0) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 921 Score = 30.4 bits (67), Expect = 3.5 Identities = 25/101 (24%), Positives = 45/101 (44%), Gaps = 11/101 (10%) Frame = +2 Query: 59 EATAQSHRRLVEHSELDRLEMIDP-----------LSLVGLILTMVQLIAKEAETARQNK 205 E A+ + L S++D++ + P L + L++ M LI KEAE +R NK Sbjct: 805 ERIAKYEKILKTLSKIDKINYLAPDEKVPVSATAVLGEIELLIPMADLIDKEAELSRLNK 864 Query: 206 KKCLDLAERARTLANVLPSYGYPAVKDEDTERVLRRLKEAL 328 +LA+ + + P D+ E ++ + K+ L Sbjct: 865 ----ELAKLNKDIELAQGKLNNPKFTDKAPEEIIAKEKDKL 901
>SYV_LEGPH (Q5ZXL2) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 921 Score = 30.4 bits (67), Expect = 3.5 Identities = 25/101 (24%), Positives = 45/101 (44%), Gaps = 11/101 (10%) Frame = +2 Query: 59 EATAQSHRRLVEHSELDRLEMIDP-----------LSLVGLILTMVQLIAKEAETARQNK 205 E A+ + L S++D++ + P L + L++ M LI KEAE +R NK Sbjct: 805 ERIAKYEKILKTLSKIDKINYLAPDEKVPVSATAVLGEIELLIPMADLIDKEAELSRLNK 864 Query: 206 KKCLDLAERARTLANVLPSYGYPAVKDEDTERVLRRLKEAL 328 +LA+ + + P D+ E ++ + K+ L Sbjct: 865 ----ELAKLNKDIELAQGKLNNPKFTDKAPEEIIAKEKDKL 901
>SYV_LEGPA (Q5X728) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 921 Score = 30.4 bits (67), Expect = 3.5 Identities = 25/101 (24%), Positives = 45/101 (44%), Gaps = 11/101 (10%) Frame = +2 Query: 59 EATAQSHRRLVEHSELDRLEMIDP-----------LSLVGLILTMVQLIAKEAETARQNK 205 E A+ + L S++D++ + P L + L++ M LI KEAE +R NK Sbjct: 805 ERIAKYEKILKTLSKIDKINYLAPDEKVPVSATAVLGEIELLIPMADLIDKEAELSRLNK 864 Query: 206 KKCLDLAERARTLANVLPSYGYPAVKDEDTERVLRRLKEAL 328 +LA+ + + P D+ E ++ + K+ L Sbjct: 865 ----ELAKLNKDIELAQGKLNNPKFTDKAPEEIIAKEKDKL 901
>POLK_MOUSE (Q9QUG2) DNA polymerase kappa (EC 2.7.7.7) (DINB protein) (DINP)| Length = 852 Score = 30.4 bits (67), Expect = 3.5 Identities = 19/78 (24%), Positives = 39/78 (50%), Gaps = 2/78 (2%) Frame = +2 Query: 266 GYPAVKDEDTERVLRRLKEALDETLTLIQSCQTV--SICSRNRKAAELDGVNGKINDCIR 439 G A++ + + L++L E+ ET CQT +C R ++ L+ N +++C+ Sbjct: 588 GQQALQILEPSQALKKLSESF-ETSENSNDCQTFICPVCFREQEGVSLEAFNEHVDECLD 646 Query: 440 DLNFIRNARTNQVAAASS 493 + N++ + + ASS Sbjct: 647 GPSTSENSKISCYSHASS 664
>IF3A_HUMAN (Q14152) Eukaryotic translation initiation factor 3 subunit 10| (eIF-3 theta) (eIF3 p167) (eIF3 p180) (eIF3 p185) (eIF3a) Length = 1382 Score = 30.4 bits (67), Expect = 3.5 Identities = 22/105 (20%), Positives = 54/105 (51%), Gaps = 3/105 (2%) Frame = +2 Query: 101 ELDRLEMIDPLSLVGLILTMVQLIAKEAETARQNKKKCLDLAERARTLANVLPSYGYPAV 280 +++ LE +DP ++ + ++ KE + +N++K +D ERA+ L + P + Sbjct: 657 DIEDLEELDPDFIMAKQVEQLEKEKKELQERLKNQEKKIDYFERAKRLEEI------PLI 710 Query: 281 KDEDTERVLRRL---KEALDETLTLIQSCQTVSICSRNRKAAELD 406 K E+ ++ + ++ +E +T +Q + ++ +NR + L+ Sbjct: 711 KSAYEEQRIKDMDLWEQQEEERITTMQLEREKALEHKNRMSRMLE 755
>MFP1_ARATH (Q9LW85) MAR binding filament-like protein 1| Length = 726 Score = 30.4 bits (67), Expect = 3.5 Identities = 32/137 (23%), Positives = 54/137 (39%), Gaps = 18/137 (13%) Frame = +2 Query: 89 VEHSELDRLEMIDP-----LSLVGLILTMVQLIAKEAETARQNKKKCLDLAERARTLANV 253 ++H + +R + ++ LSL+ + + L+ + KK C L ++ +L N Sbjct: 183 LQHEQEERKKEVEKAKEEQLSLINQLNSAKDLVTELGRELSSEKKLCEKLKDQIESLENS 242 Query: 254 LPSYGYPAVKDEDTERVLRRLKEALDETLTLIQSCQTVSI-------------CSRNRKA 394 L G ED E + +L+E LD L +S+ S +K Sbjct: 243 LSKAG------EDKEALETKLREKLDLVEGLQDRINLLSLELKDSEEKAQRFNASLAKKE 296 Query: 395 AELDGVNGKINDCIRDL 445 AEL +N RDL Sbjct: 297 AELKELNSIYTQTSRDL 313
>IRK14_HUMAN (Q9UNX9) ATP-sensitive inward rectifier potassium channel 14| (Potassium channel, inwardly rectifying subfamily J member 14) (Inward rectifier K(+) channel Kir2.4) (IRK4) Length = 436 Score = 30.4 bits (67), Expect = 3.5 Identities = 20/44 (45%), Positives = 23/44 (52%) Frame = +1 Query: 160 GAADRKGSGDGTAEQEEVLGPGRTRTHSGQRTAQLRIPCGERRG 291 GA D SGD A EE GPG R +G A ++ P G RRG Sbjct: 12 GALD---SGDSRAGDEEEAGPGLCR--NGWAPAPVQSPVGRRRG 50
>IF2_PROAC (Q6A7M5) Translation initiation factor IF-2| Length = 964 Score = 30.0 bits (66), Expect = 4.5 Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 6/68 (8%) Frame = +1 Query: 151 PNDGAADRKGS---GDGTAEQEEVLGPGRTRTHSGQRTAQLRIPCGERRGHGESAEEAQG 321 P GA R G+ G+ + +G R R+ GQR+ R GER ++ ++G Sbjct: 199 PRPGAGRRTGAPRPGNNPFASSQGMGQSRHRSEGGQRSGGSRSGQGERMPRPGGSQGSRG 258 Query: 322 G---PRRN 336 G PR N Sbjct: 259 GSGMPRPN 266
>IF3A_MOUSE (P23116) Eukaryotic translation initiation factor 3 subunit 10| (eIF-3 theta) (eIF3 p167) (eIF3 p180) (eIF3 p185) (eIF3a) (p162 protein) (Centrosomin) Length = 1344 Score = 30.0 bits (66), Expect = 4.5 Identities = 24/105 (22%), Positives = 52/105 (49%), Gaps = 3/105 (2%) Frame = +2 Query: 101 ELDRLEMIDPLSLVGLILTMVQLIAKEAETARQNKKKCLDLAERARTLAN---VLPSYGY 271 +++ LE +DP ++ + ++ KE + +N++K +D ERA+ L + +Y Sbjct: 657 DIEDLEELDPDFIMAKQVEQLEKEKKELQERLKNQEKKIDYFERAKRLEEIPLIKSAYEE 716 Query: 272 PAVKDEDTERVLRRLKEALDETLTLIQSCQTVSICSRNRKAAELD 406 VKD D ++ +E +T +Q + ++ +NR + L+ Sbjct: 717 QRVKDMDL------WEQQEEERITTMQLEREKALEHKNRMSRMLE 755
>MYO3A_HUMAN (Q8NEV4) Myosin IIIA (EC 2.7.11.1)| Length = 1616 Score = 30.0 bits (66), Expect = 4.5 Identities = 27/99 (27%), Positives = 43/99 (43%) Frame = +2 Query: 86 LVEHSELDRLEMIDPLSLVGLILTMVQLIAKEAETARQNKKKCLDLAERARTLANVLPSY 265 ++E + + RL + I L K +E R + C + E+A L N Sbjct: 977 ILETARIRRLGFSHRILFANFIKRYYLLCYKSSEEPRMSPDTCATILEKAG-LDNWALGK 1035 Query: 266 GYPAVKDEDTERVLRRLKEALDETLTLIQSCQTVSICSR 382 +K E++ KEA+D+ L LIQ+C +CSR Sbjct: 1036 TKVFLKYYHVEQLNLMRKEAIDK-LILIQACVRAFLCSR 1073
>CCD46_HUMAN (Q8N8E3) Coiled-coil domain-containing protein 46| Length = 955 Score = 30.0 bits (66), Expect = 4.5 Identities = 18/75 (24%), Positives = 33/75 (44%) Frame = +2 Query: 284 DEDTERVLRRLKEALDETLTLIQSCQTVSICSRNRKAAELDGVNGKINDCIRDLNFIRNA 463 D D +++L R ++E TL +S Q + + + K+ IRD IR Sbjct: 280 DADVQKILERKNNEIEELKTLYRSKQ-------HETEETIRKLEKKVQTLIRDCQVIRET 332 Query: 464 RTNQVAAASSVPAQT 508 + +Q+A + Q+ Sbjct: 333 KEDQIAELKKICEQS 347
>PUR1_PYRHO (O57979) Amidophosphoribosyltransferase precursor (EC 2.4.2.14)| (Glutamine phosphoribosylpyrophosphate amidotransferase) (ATASE) (GPATase) Length = 449 Score = 30.0 bits (66), Expect = 4.5 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 3/48 (6%) Frame = +1 Query: 238 HSGQRTAQLRIPCGERR---GHGESAEEAQGGPRRNLDAHPVLPDCKY 372 H GQ A + + G+ R GHG +E +GG R L+ +PV+ +Y Sbjct: 33 HRGQEGAGISVWDGDIRTVKGHGLVSEVFKGGSIRRLNGNPVIGHVRY 80
>BRE1B_RAT (Q8CJB9) Ubiquitin-protein ligase BRE1B (EC 6.3.2.-) (BRE1-B) (RING| finger protein 40) (Syntaxin-1-interacting RING finger protein) (Protein staring) Length = 1002 Score = 29.6 bits (65), Expect = 5.9 Identities = 35/127 (27%), Positives = 54/127 (42%), Gaps = 9/127 (7%) Frame = +2 Query: 62 ATAQSHRRLVEHSELDRLEMIDPL--SLVGLILTMVQLIAKEAETARQNKKKCLDLAERA 235 A+ SH R +EH E D L + L ++ L T+ Q + KE E R ++ L E+A Sbjct: 419 ASKNSHLRHIEHMESDELGLQKKLRTEVIQLEDTLAQ-VRKEYEMLRIEFEQNLAANEQA 477 Query: 236 -------RTLANVLPSYGYPAVKDEDTERVLRRLKEALDETLTLIQSCQTVSICSRNRKA 394 R L + L ++ + D +R R+L+E E L S C N Sbjct: 478 GPINREMRHLISSLQNHNHQL--KGDAQRYKRKLREVQAEIGKLRAQASGSSHCGPNLSH 535 Query: 395 AELDGVN 415 + G+N Sbjct: 536 PDDSGLN 542
>MORC3_HUMAN (Q14149) MORC family CW-type zinc finger 3 (Zinc finger CW-type| coiled-coil domain protein 3) Length = 939 Score = 29.6 bits (65), Expect = 5.9 Identities = 16/63 (25%), Positives = 32/63 (50%), Gaps = 7/63 (11%) Frame = +2 Query: 281 KDEDTERVLRRLKEALDETLTLIQSCQTV-------SICSRNRKAAELDGVNGKINDCIR 439 K E + ++ + ++AL+E L + C + S CS N +E+D + +++D R Sbjct: 762 KSESPDHMVSQYQQALEEIERLKKQCSALQHVKAECSQCSNNESKSEMDEMAVQLDDVFR 821 Query: 440 DLN 448 L+ Sbjct: 822 QLD 824
>PRP5_YARLI (Q6CCZ1) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 974 Score = 29.6 bits (65), Expect = 5.9 Identities = 14/51 (27%), Positives = 26/51 (50%) Frame = +1 Query: 172 RKGSGDGTAEQEEVLGPGRTRTHSGQRTAQLRIPCGERRGHGESAEEAQGG 324 RK + G +++ G +G++ A+L GE+ G G+S + +GG Sbjct: 196 RKATDQGQVKRKMFFGGDSDEEDAGRKPAKLLKKLGEKEGSGKSEGKGRGG 246
>RPOC_WEIPA (P96178) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) (Fragment) Length = 1054 Score = 29.6 bits (65), Expect = 5.9 Identities = 15/56 (26%), Positives = 27/56 (48%) Frame = +1 Query: 211 VLGPGRTRTHSGQRTAQLRIPCGERRGHGESAEEAQGGPRRNLDAHPVLPDCKYML 378 + G TRT++ TA++R+ G+R GE+ E P+ + L Y++ Sbjct: 928 IQGETDTRTYTLPMTARMRVGEGDRIHRGETLNEGSADPKEIIQVRDTLATENYIV 983
>MURG_NEIG1 (Q5F6L8) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)| pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) Length = 355 Score = 29.6 bits (65), Expect = 5.9 Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 2/37 (5%) Frame = +2 Query: 143 GLILTMVQLIAKEAET--ARQNKKKCLDLAERARTLA 247 GL+L QL A++ N++KCL AE ARTLA Sbjct: 302 GLLLPQTQLTAEKLAEILGSLNREKCLKWAENARTLA 338
>MYSC_CHICK (P29616) Myosin heavy chain, cardiac muscle isoform (Fragment)| Length = 1102 Score = 29.6 bits (65), Expect = 5.9 Identities = 20/96 (20%), Positives = 45/96 (46%), Gaps = 5/96 (5%) Frame = +2 Query: 80 RRLVEHSELDRLEMIDPL-----SLVGLILTMVQLIAKEAETARQNKKKCLDLAERARTL 244 R+L EH L+ E ++ L SL+ + I++ ++ ++C + ++A+ Sbjct: 865 RKLAEHELLEATERVNLLHTQNTSLINQKKKLEGDISQMQNEVEESIQECRNAEQKAKKA 924 Query: 245 ANVLPSYGYPAVKDEDTERVLRRLKEALDETLTLIQ 352 K++DT L R+K+ +++T+ +Q Sbjct: 925 ITDAAMMAEELKKEQDTSAHLERMKKNMEQTIKDLQ 960
>BCN1_MOUSE (O88597) Beclin-1 (Coiled-coil myosin-like BCL2-interacting| protein) Length = 448 Score = 29.3 bits (64), Expect = 7.8 Identities = 21/69 (30%), Positives = 33/69 (47%) Frame = +2 Query: 185 ETARQNKKKCLDLAERARTLANVLPSYGYPAVKDEDTERVLRRLKEALDETLTLIQSCQT 364 E QN K+CL++ E+ + ++D+E++ R LKE E LIQ + Sbjct: 154 ENECQNYKRCLEILEQ---------------MNEDDSEQLQRELKELALEEERLIQELED 198 Query: 365 VSICSRNRK 391 V +NRK Sbjct: 199 V---EKNRK 204
>LAMB1_DROME (P11046) Laminin beta-1 chain precursor (Laminin B1 chain)| Length = 1790 Score = 29.3 bits (64), Expect = 7.8 Identities = 27/75 (36%), Positives = 34/75 (45%), Gaps = 8/75 (10%) Frame = +2 Query: 170 IAKEAETARQNKKKCLDLAERARTLANVLPSYGYPAVKD--EDTERVLR------RLKEA 325 +AK+AETA +KK D RA T A + S Y K E +ER L +L E Sbjct: 1447 VAKDAETAITSKKDQADQTIRALTQAKLNASEAYEKAKRGFEQSERYLNQTNANIKLAEN 1506 Query: 326 LDETLTLIQSCQTVS 370 L L Q +T S Sbjct: 1507 LFIALNNFQENKTAS 1521
>MURG_NEIMB (Q9K0Y2) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)| pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) Length = 355 Score = 29.3 bits (64), Expect = 7.8 Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 2/37 (5%) Frame = +2 Query: 143 GLILTMVQLIAKEAET--ARQNKKKCLDLAERARTLA 247 GL+L QL A++ N++KCL AE ARTLA Sbjct: 302 GLLLPQTQLTAEKLAEILGGLNREKCLKWAENARTLA 338
>MURG_NEIMA (Q9JSZ7) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)| pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) Length = 355 Score = 29.3 bits (64), Expect = 7.8 Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 2/37 (5%) Frame = +2 Query: 143 GLILTMVQLIAKEAET--ARQNKKKCLDLAERARTLA 247 GL+L QL A++ N++KCL AE ARTLA Sbjct: 302 GLLLPQTQLTAEKLAEILGGLNREKCLKWAENARTLA 338
>TYSY_PSEAE (Q9I6F1) Thymidylate synthase (EC 2.1.1.45) (TS) (TSase)| Length = 264 Score = 29.3 bits (64), Expect = 7.8 Identities = 15/48 (31%), Positives = 28/48 (58%) Frame = -1 Query: 492 ELAAAT*FVRAFLMKLRSLMQSLIFPLTPSNSAAFRLREHILTVWQDW 349 +LAA V L+S++ L++ L S + A+ L+EH +++W +W Sbjct: 37 DLAAGFPLVTTKKCHLKSIVHELLWFLKGSTNIAY-LKEHGVSIWDEW 83
>YHI1_MYCTU (P0A5B5) Hypothetical HIT-like protein Rv0759c/MT0784| Length = 133 Score = 29.3 bits (64), Expect = 7.8 Identities = 14/40 (35%), Positives = 24/40 (60%) Frame = +2 Query: 59 EATAQSHRRLVEHSELDRLEMIDPLSLVGLILTMVQLIAK 178 E Q H +V +E+D + +DP +L G ++++ QLI K Sbjct: 30 EPMTQGHTLVVPRAEIDHWQNVDP-ALFGRVMSVSQLIGK 68
>YHI1_MYCBO (P0A5B6) Hypothetical HIT-like protein Mb0782c| Length = 133 Score = 29.3 bits (64), Expect = 7.8 Identities = 14/40 (35%), Positives = 24/40 (60%) Frame = +2 Query: 59 EATAQSHRRLVEHSELDRLEMIDPLSLVGLILTMVQLIAK 178 E Q H +V +E+D + +DP +L G ++++ QLI K Sbjct: 30 EPMTQGHTLVVPRAEIDHWQNVDP-ALFGRVMSVSQLIGK 68 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.317 0.139 0.425 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 62,675,205 Number of Sequences: 219361 Number of extensions: 1047024 Number of successful extensions: 4146 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 4021 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4141 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4488201198 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits)
