ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal13p17 |
|---|---|
| Clone Library Name | barley_pub |
>ACOX1_ARATH (O65202) Acyl-coenzyme A oxidase 1, peroxisomal (EC 1.3.3.6) (AOX| 1) (Long-chain acyl-CoA oxidase) (AtCX1) Length = 664 Score = 157 bits (398), Expect = 1e-38 Identities = 75/104 (72%), Positives = 85/104 (81%) Frame = +3 Query: 240 DHLAGERATAHFDVDAMKVAWAGSQHAVEVADRMARLVASDPVFRKDTRTMLSRKELFKD 419 DHLA ER A FDV+ MK+ WAGS+HA EV+DR+ARLVASDPVF K R LSRKELFK Sbjct: 5 DHLADERNKAEFDVEDMKIVWAGSRHAFEVSDRIARLVASDPVFEKSNRARLSRKELFKS 64 Query: 420 TLKKAAHAWKRIVELRLTEEEANLLRLYVDQPGYVDLHWGMFVP 551 TL+K AHA+KRI+ELRL EEEA LR ++DQP YVDLHWGMFVP Sbjct: 65 TLRKCAHAFKRIIELRLNEEEAGRLRHFIDQPAYVDLHWGMFVP 108
>ACO12_ARATH (Q9ZQP2) Putative acyl-coenzyme A oxidase 1.2, peroxisomal (EC| 1.3.3.6) Length = 664 Score = 147 bits (370), Expect = 3e-35 Identities = 67/104 (64%), Positives = 86/104 (82%) Frame = +3 Query: 240 DHLAGERATAHFDVDAMKVAWAGSQHAVEVADRMARLVASDPVFRKDTRTMLSRKELFKD 419 DHLA ER A F+VD MK+ WAGS+HA +V++RM+RLVA+DPVF K R ++SRKELFK+ Sbjct: 5 DHLADERNKAEFNVDDMKIVWAGSRHAFDVSNRMSRLVANDPVFEKSKRAVMSRKELFKN 64 Query: 420 TLKKAAHAWKRIVELRLTEEEANLLRLYVDQPGYVDLHWGMFVP 551 TL+K+ HAWK I ELRL++EE LR ++DQPG++DLHWGMFVP Sbjct: 65 TLRKSVHAWKLINELRLSDEEGLKLRSFMDQPGFLDLHWGMFVP 108
>ACOX1_PHACI (Q8HYL8) Acyl-coenzyme A oxidase 1, peroxisomal (EC 1.3.3.6)| (Palmitoyl-CoA oxidase) (AOX) Length = 661 Score = 44.3 bits (103), Expect = 2e-04 Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 3/108 (2%) Frame = +3 Query: 237 PDHLAGERATAHFDVDAMKVAWAGSQHAVEVADRMARLVASDPVFRKDTRTMLSRKELFK 416 PD L ER A FD + + G + L+ +DP F+ + L+R E ++ Sbjct: 3 PD-LRRERDAASFDAEKLTYILDGGSERTRRRREIENLILNDPDFKHEDLNFLTRSERYE 61 Query: 417 DTLKKAAHAWKRIVELRLTE-EEANLLRLYV--DQPGYVDLHWGMFVP 551 ++K+A K++ + + + EE + +V +P +DLH GMF+P Sbjct: 62 IAVRKSATMVKKMRDFGIADPEEIMWFKNFVHRGRPEPLDLHLGMFLP 109
>ACOX1_MOUSE (Q9R0H0) Acyl-coenzyme A oxidase 1, peroxisomal (EC 1.3.3.6)| (Palmitoyl-CoA oxidase) (AOX) Length = 661 Score = 38.1 bits (87), Expect = 0.017 Identities = 27/108 (25%), Positives = 52/108 (48%), Gaps = 3/108 (2%) Frame = +3 Query: 237 PDHLAGERATAHFDVDAMKVAWAGSQHAVEVADRMARLVASDPVFRKDTRTMLSRKELFK 416 PD L ERA A F+ + + GS + L+ +DP F+ + L+R + ++ Sbjct: 3 PD-LRKERAAATFNPELITHVLDGSPENTRRRREIENLILNDPDFQHEDYNFLTRSQRYE 61 Query: 417 DTLKKAAHAWKRIVELRLTEEEANLLRLYVDQPGYVD---LHWGMFVP 551 +KK+A K++ E + + E + + +V+ L++ MF+P Sbjct: 62 VAVKKSATMVKKMREFGIADPEEIMWFKKLHMVNFVEPVGLNYSMFIP 109
>ACOX1_CAVPO (Q9Z1N0) Acyl-coenzyme A oxidase 1, peroxisomal (EC 1.3.3.6)| (Palmitoyl-CoA oxidase) (AOX) Length = 661 Score = 37.7 bits (86), Expect = 0.022 Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 6/111 (5%) Frame = +3 Query: 237 PDHLAGERATAHFDVDAMKVAWAGSQHAVEVADRMARLVASDPVFRKDTRTMLSRKELFK 416 PD L ERA A F+ + + GS + + SDP F+ + L+R E ++ Sbjct: 3 PD-LRRERAAATFNPELITHLLDGSPEKTRRRREIENKILSDPDFQHENHNFLTRSERYE 61 Query: 417 DTLKKAAHAWKRIVELRLTEEE------ANLLRLYVDQPGYVDLHWGMFVP 551 +KK+A K++ E + + + LL +V+ G L++ MF+P Sbjct: 62 AAIKKSAVMVKKMREFGIADPDEIMWFKRLLLGNFVEPVG---LNYSMFIP 109
>ACOX1_RAT (P07872) Acyl-coenzyme A oxidase 1, peroxisomal (EC 1.3.3.6)| (Palmitoyl-CoA oxidase) (AOX) [Contains: Acyl-CoA oxidase 1 peroxisomal, A chain; Acyl-CoA oxidase 1 peroxisomal, B chain; Acyl-CoA oxidase 1 peroxisomal, C chain] Length = 661 Score = 37.4 bits (85), Expect = 0.028 Identities = 30/110 (27%), Positives = 57/110 (51%), Gaps = 5/110 (4%) Frame = +3 Query: 237 PDHLAGERATAHFDVDAMKVAWAGSQHAVEVADRMARLVASDPVFRKDTRTMLSRKELFK 416 PD L ERA+A F+ + + GS + L+ +DP F+ + L+R + ++ Sbjct: 3 PD-LRKERASATFNPELITHILDGSPENTRRRREIENLILNDPDFQHEDYNFLTRSQRYE 61 Query: 417 DTLKKAAHAWKRIVELRLTEEEANL--LRLYVD---QPGYVDLHWGMFVP 551 +KK+A K++ E +++ E + +LY+ +P V L++ MF+P Sbjct: 62 VAVKKSATMVKKMREYGISDPEEIMWFKKLYLANFVEP--VGLNYSMFIP 109
>ACOX2_MOUSE (Q9QXD1) Acyl-coenzyme A oxidase 2, peroxisomal (EC 1.17.99.3)| (3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholestanoyl-CoA 24-hydroxylase) (3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholestanoyl-CoA oxidase) (Trihydroxycoprostanoyl-CoA oxid Length = 681 Score = 34.3 bits (77), Expect = 0.24 Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 2/89 (2%) Frame = +3 Query: 273 FDVDAMKVAWAGSQHAVEVADRMARLVASDPVFRKDTRTMLSRKELFKDTLKKAAHAWKR 452 F V+ + G E+ R+ L+ DPVF ++R EL++D ++K H K Sbjct: 31 FSVERLTNILDGGIPNTELRRRVESLIQRDPVFNLKHLYFMTRDELYEDAVQKRFHLEKL 90 Query: 453 IVELRLTEEEANLLRLYVDQ--PGYVDLH 533 L +E+ R+Y D+ GY +L+ Sbjct: 91 AWSLGWSEDGPE--RIYADRVLAGYNNLN 117
>ACOX2_RAT (P97562) Acyl-coenzyme A oxidase 2, peroxisomal (EC 1.17.99.3)| (3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholestanoyl-CoA 24-hydroxylase) (3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholestanoyl-CoA oxidase) (Trihydroxycoprostanoyl-CoA oxidas Length = 681 Score = 33.9 bits (76), Expect = 0.31 Identities = 21/81 (25%), Positives = 39/81 (48%) Frame = +3 Query: 237 PDHLAGERATAHFDVDAMKVAWAGSQHAVEVADRMARLVASDPVFRKDTRTMLSRKELFK 416 PD + ER + F V+ + G + ++ ++ SDPVF ++R+EL++ Sbjct: 20 PD-IDSERHSPSFSVERLTNILDGGLPNTVLRRKVESIIQSDPVFNLKKLYFMTREELYE 78 Query: 417 DTLKKAAHAWKRIVELRLTEE 479 D ++K H K L +E+ Sbjct: 79 DAIQKRFHLEKLAWSLGWSED 99
>STK6L_XENLA (Q91819) Serine/threonine-protein kinase Eg2-like (EC 2.7.11.1)| (p46XlEg22) Length = 408 Score = 30.8 bits (68), Expect = 2.7 Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 2/45 (4%) Frame = +3 Query: 375 KDTRTMLSRKELFKDTLKKAA--HAWKRIVELRLTEEEANLLRLY 503 ++++ +L+ K LFK L+KA H +R VE++ N+LRLY Sbjct: 160 RESKFILALKVLFKSQLEKAGVEHQLRREVEIQSHLRHPNILRLY 204
>STK6_XENLA (Q91820) Serine/threonine-protein kinase Eg2 (EC 2.7.11.1) (pEg2)| (p46Eg265) Length = 407 Score = 30.8 bits (68), Expect = 2.7 Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 2/45 (4%) Frame = +3 Query: 375 KDTRTMLSRKELFKDTLKKAA--HAWKRIVELRLTEEEANLLRLY 503 ++++ +L+ K LFK L+KA H +R VE++ N+LRLY Sbjct: 160 RESKFILALKVLFKSQLEKAGVEHQLRREVEIQSHLRHPNILRLY 204
>CRTSO_ARATH (Q9M9Y8) Carotenoid isomerase, chloroplast precursor (EC 5.-.-.-)| (CrtISO) (Carotenoid and chloroplast regulation protein 2) Length = 587 Score = 30.8 bits (68), Expect = 2.7 Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 4/51 (7%) Frame = +3 Query: 402 KELFKDTLKKAAHAWKRIVEL----RLTEEEANLLRLYVDQPGYVDLHWGM 542 +E F T+ A W +L +L +EE N ++YV P ++ +H G+ Sbjct: 340 REFFAKTIISNATRWDTFGKLLKGEKLPKEEENFQKVYVKAPSFLSIHMGV 390
>ACOX3_YARLI (O74936) Acyl-coenzyme A oxidase 3 (EC 1.3.3.6) (Acyl-CoA oxidase| 3) Length = 700 Score = 30.4 bits (67), Expect = 3.5 Identities = 32/115 (27%), Positives = 51/115 (44%), Gaps = 11/115 (9%) Frame = +3 Query: 237 PDHLAGERATAHFDVDAMKVAWAGSQHAVEVADRMARLVASDPVFRKDTRTMLSRKELFK 416 P LAGERA F + M G + V + +R+ + DPV + +++L + Sbjct: 24 PKALAGERAKVKFPIKDMTEFLHGGEENVTMIERLMTELERDPVLNVSGDYDMPKEQLRE 83 Query: 417 DTLKKAAHA---WKRIVELRLTEEEANLLRLYVDQPGYVDL--------HWGMFV 548 + + A WK+ TE+EA LLR + G VD+ H G+F+ Sbjct: 84 TAVARIAALSGHWKKD-----TEKEA-LLRSQLH--GIVDMGTRIRLGVHTGLFM 130
>THYX_HALMA (Q5V325) Thymidylate synthase thyX (EC 2.1.1.148) (TS) (TSase)| Length = 247 Score = 30.4 bits (67), Expect = 3.5 Identities = 11/32 (34%), Positives = 23/32 (71%) Frame = +3 Query: 399 RKELFKDTLKKAAHAWKRIVELRLTEEEANLL 494 R E+FKDT+++A +++ ++EL + E+A + Sbjct: 147 RAEIFKDTIEQAVESYQELLELGMPPEDARFV 178
>STK6_HUMAN (O14965) Serine/threonine-protein kinase 6 (EC 2.7.11.1)| (Serine/threonine kinase 15) (Aurora/IPL1-related kinase 1) (Aurora-related kinase 1) (hARK1) (Aurora-A) (Breast-tumor-amplified kinase) Length = 403 Score = 30.4 bits (67), Expect = 3.5 Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 2/45 (4%) Frame = +3 Query: 375 KDTRTMLSRKELFKDTLKKAA--HAWKRIVELRLTEEEANLLRLY 503 K ++ +L+ K LFK L+KA H +R VE++ N+LRLY Sbjct: 153 KQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 197
>FER1_CAEEL (Q17388) Sperm vesicle fusion protein fer-1| Length = 2034 Score = 30.0 bits (66), Expect = 4.5 Identities = 16/87 (18%), Positives = 39/87 (44%) Frame = +3 Query: 276 DVDAMKVAWAGSQHAVEVADRMARLVASDPVFRKDTRTMLSRKELFKDTLKKAAHAWKRI 455 D D + W+G+ H ++ ++ + + + +K+ F ++ AH + Sbjct: 239 DDDGKEQIWSGA-HLIDYTLKIRVFSVEQLIRQMINERKIKKKQRFYVMVQCGAHKTETT 297 Query: 456 VELRLTEEEANLLRLYVDQPGYVDLHW 536 +E +E+AN+ + +Q Y+ + W Sbjct: 298 MESAFLDEDANIASVKFEQEIYLPIQW 324
>STK6_RAT (P59241) Serine/threonine-protein kinase 6 (EC 2.7.11.1) (Aurora-A)| (ratAurA) Length = 397 Score = 30.0 bits (66), Expect = 4.5 Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 2/45 (4%) Frame = +3 Query: 375 KDTRTMLSRKELFKDTLKKAA--HAWKRIVELRLTEEEANLLRLY 503 K ++ +L+ K LFK L+KA H +R VE++ N+LRLY Sbjct: 146 KQSKFILALKVLFKVQLEKAGVEHQLRREVEIQSHLRHPNILRLY 190
>UBP15_MOUSE (Q8R5H1) Ubiquitin carboxyl-terminal hydrolase 15 (EC 3.1.2.15)| (Ubiquitin thioesterase 15) (Ubiquitin-specific-processing protease 15) (Deubiquitinating enzyme 15) Length = 981 Score = 29.6 bits (65), Expect = 5.9 Identities = 12/23 (52%), Positives = 16/23 (69%) Frame = -3 Query: 540 CPNGDRHSQAGRRIALASLPPLL 472 CPN H QA +++ L SLPP+L Sbjct: 809 CPNCKEHQQATKKLDLWSLPPVL 831
>UBP15_HUMAN (Q9Y4E8) Ubiquitin carboxyl-terminal hydrolase 15 (EC 3.1.2.15)| (Ubiquitin thioesterase 15) (Ubiquitin-specific-processing protease 15) (Deubiquitinating enzyme 15) (Unph-2) (Unph4) Length = 981 Score = 29.6 bits (65), Expect = 5.9 Identities = 12/23 (52%), Positives = 16/23 (69%) Frame = -3 Query: 540 CPNGDRHSQAGRRIALASLPPLL 472 CPN H QA +++ L SLPP+L Sbjct: 809 CPNCKEHQQATKKLDLWSLPPVL 831
>ACOX2_RABIT (O02767) Acyl-coenzyme A oxidase 2, peroxisomal (EC 1.17.99.3)| (3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholestanoyl-CoA 24-hydroxylase) (3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholestanoyl-CoA oxidase) (Trihydroxycoprostanoyl-CoA oxid Length = 681 Score = 29.6 bits (65), Expect = 5.9 Identities = 21/86 (24%), Positives = 38/86 (44%), Gaps = 1/86 (1%) Frame = +3 Query: 237 PDHLAGERATAHFDVDAM-KVAWAGSQHAVEVADRMARLVASDPVFRKDTRTMLSRKELF 413 PD + ER F V+ + + G+QH + ++ ++ +P F +S+ EL+ Sbjct: 20 PD-MESERCAQSFSVERLTNILDGGAQHTA-LRRKVESIIHGNPQFSSKDNYFMSQNELY 77 Query: 414 KDTLKKAAHAWKRIVELRLTEEEANL 491 + +K H K + TEE L Sbjct: 78 EAATRKRYHLQKIAQRMGWTEEGREL 103
>CRTSO_DAUCA (Q2VEX9) Carotenoid isomerase, chloroplast precursor (EC 5.-.-.-)| (CrtISO) Length = 615 Score = 29.6 bits (65), Expect = 5.9 Identities = 17/66 (25%), Positives = 31/66 (46%) Frame = +3 Query: 345 RLVASDPVFRKDTRTMLSRKELFKDTLKKAAHAWKRIVELRLTEEEANLLRLYVDQPGYV 524 RL + +F K+ + +R + F LK+ L +EE N +LY+ P ++ Sbjct: 363 RLANGNEIFAKNIISNATRWDTFGKLLKQD----------ELPKEEENFQKLYIKAPSFL 412 Query: 525 DLHWGM 542 +H G+ Sbjct: 413 SIHLGV 418
>ACOX5_CANTR (P08790) Acyl-coenzyme A oxidase 5 (EC 1.3.3.6) (Acyl-CoA oxidase| 5) (PXP-5) Length = 661 Score = 29.6 bits (65), Expect = 5.9 Identities = 19/88 (21%), Positives = 32/88 (36%) Frame = +3 Query: 237 PDHLAGERATAHFDVDAMKVAWAGSQHAVEVADRMARLVASDPVFRKDTRTMLSRKELFK 416 P L ER F+ + GSQ E+ M + DP+ + D K+ + Sbjct: 1 PTELQKERELTKFNPKELNYFLEGSQERSEIISNMVEQMQKDPILKVDASYYNLTKDQQR 60 Query: 417 DTLKKAAHAWKRIVELRLTEEEANLLRL 500 + K R E +++A L + Sbjct: 61 EVTAKKIARLSRYFEHEYPDQQAQRLSI 88
>STK6_MOUSE (P97477) Serine/threonine-protein kinase 6 (EC 2.7.11.1)| (Aurora-family kinase 1) (Aurora/IPL1-related kinase 1) (Ipl1- and aurora-related kinase 1) (Aurora-A) (Serine/threonine-protein kinase Ayk1) Length = 395 Score = 29.3 bits (64), Expect = 7.8 Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 2/45 (4%) Frame = +3 Query: 375 KDTRTMLSRKELFKDTLKKA--AHAWKRIVELRLTEEEANLLRLY 503 + ++ +L+ K LFK L+KA H +R VE++ N+LRLY Sbjct: 144 RQSKFILALKVLFKTQLEKANVEHQLRREVEIQSHLRHPNILRLY 188 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 60,758,818 Number of Sequences: 219361 Number of extensions: 888292 Number of successful extensions: 3513 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 3396 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3512 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4488201198 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
