ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal14e23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DQ019635.1| Triticum aestivum U2AF large subunit (U2AF65) mRN... 525 e-146
2dbj|AK066311.1| Oryza sativa (japonica cultivar-group) cDNA clon... 131 2e-27
3gb|AC135190.2| Oryza sativa (japonica cultivar-group) chromosome... 119 7e-24
4gb|AC136998.2| Oryza sativa (japonica cultivar-group) chromosome... 119 7e-24
5dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 119 7e-24
6gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 119 7e-24
7dbj|AK073768.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 1e-06
8dbj|AK059255.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 1e-06
9gb|AY106657.1| Zea mays PCO074093 mRNA sequence 56 9e-05
10gb|AY104538.1| Zea mays PCO122195 mRNA sequence 56 9e-05
11emb|CR855994.1| Wallaby DNA sequence from clone MEKBa-69G12, com... 44 0.33
12gb|AC009464.8| Homo sapiens 12 BAC RP11-19E18 (Roswell Park Canc... 44 0.33
13gb|BC082851.1| Xenopus laevis hypothetical LOC494751, mRNA (cDNA... 44 0.33
14ref|XM_656973.1| Aspergillus nidulans FGSC A4 hypothetical prote... 42 1.3
15gb|DQ388031.1| Aucoumea klaineana clone ak25 microsatellite sequ... 42 1.3
16dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
17dbj|AP004562.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
18gb|AC160543.13| Mus musculus chromosome 1, clone RP23-186L22, co... 40 5.1
19gb|AE017345.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 5.1
20gb|AC125253.9| Mus musculus chromosome 1, clone RP24-141C2, comp... 40 5.1
21gb|AC008255.9| Drosophila melanogaster clone BACR48D17, complete... 40 5.1
22ref|XM_424756.1| PREDICTED: Gallus gallus similar to Splicing fa... 40 5.1
23ref|XM_416174.1| PREDICTED: Gallus gallus similar to down-regula... 40 5.1
24gb|U23526.1| Caenorhabditis elegans cosmid C01C10, complete sequ... 40 5.1
25ref|XM_505124.1| Yarrowia lipolytica CLIB122, YALI0F07557g predi... 40 5.1
26gb|AC126567.8| Homo sapiens 3 BAC RP11-656G9 (Roswell Park Cance... 40 5.1
27ref|XM_785222.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 5.1
28emb|AL161557.2|ATCHRIV57 Arabidopsis thaliana DNA chromosome 4, ... 40 5.1
29emb|AL033545.2|ATF7K2 Arabidopsis thaliana DNA chromosome 4, BAC... 40 5.1
30ref|XM_694616.1| PREDICTED: Danio rerio similar to RD RNA-bindin... 40 5.1
31gb|AC010706.8|AC010706 Drosophila melanogaster, chromosome X, re... 40 5.1
32dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
33dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
34dbj|AP003763.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
35dbj|AP003619.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
36dbj|AK070901.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.1
37gb|AE003498.5| Drosophila melanogaster chromosome X, section 50 ... 40 5.1
38gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.1
39emb|AL731763.1|CNS07YQA Oryza sativa chromosome 12, . BAC OSJNBa... 40 5.1
40gb|AC145933.3| Gallus gallus BAC clone CH261-41E11 from chromoso... 40 5.1
41emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB1... 40 5.1
42emb|AL773527.8| Pig DNA sequence from clone XX-707F1, complete s... 40 5.1 
>gb|DQ019635.1| Triticum aestivum U2AF large subunit (U2AF65) mRNA, complete cds
          Length = 1786

 Score =  525 bits (265), Expect = e-146
 Identities = 310/325 (95%)
 Strand = Plus / Plus

                                                                       
Query: 61  acgtcagcgagggcgctcgccccgaggatgatacacatacacgtgaagagggattgtcta 120
           |||||||||||| ||  |||||||||| |||||||||||| ||||||||||||||||| |
Sbjct: 47  acgtcagcgaggccgtccgccccgagggtgatacacatacgcgtgaagagggattgtcaa 106

                                                                       
Query: 121 aatccagggatcgtgacagagaaaaagaaaaggacagggagcgccatagggaccgtgacc 180
           ||||||||||||| |||||||||||||| ||||| | |||||||||||||||||||||| 
Sbjct: 107 aatccagggatcgagacagagaaaaagacaaggataaggagcgccatagggaccgtgaca 166

                                                                       
Query: 181 gagatagaggaagagacagagatcggggtcgggacagggatctagacaaggatcgggata 240
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 167 gagatagaggaagagacagagatcggggtcgggacagggatctagacaaggatcgggaca 226

                                                                       
Query: 241 gggacaaggatcgggatcgtcaccaaaggcatcaccgtgagaaaagggagcaccgagacc 300
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 227 gggacaaggatcgggatcgtcaccaaaggcatcaccgtgacaaaagggagcaccgagacc 286

                                                                       
Query: 301 gtcctgatgatcacgatcgtcacagaagccgtgattctgaaaggagaagggaccgtgaga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 287 gtcctgatgatcacgatcgtcacagaagccgtgattctgaaaggagaagggaccgcgaga 346

                                    
Query: 361 gagatggacatcacaggcatcgctc 385
           |||||||||||| ||||||||||||
Sbjct: 347 gagatggacatcgcaggcatcgctc 371



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 9  cctcgacgcgagatggccgacgacaa 34
          ||||||||||||||||||||||||||
Sbjct: 1  cctcgacgcgagatggccgacgacaa 26
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>dbj|AK066311.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013068A09, full
           insert sequence
          Length = 2841

 Score =  131 bits (66), Expect = 2e-27
 Identities = 114/130 (87%)
 Strand = Plus / Plus

                                                                       
Query: 225 gacaaggatcgggatagggacaaggatcgggatcgtcaccaaaggcatcaccgtgagaaa 284
           |||| |||| |||| |||||||||||||||||||| ||||| |||||||||||||| | |
Sbjct: 269 gacagggatagggacagggacaaggatcgggatcgccaccataggcatcaccgtgaaaga 328

                                                                       
Query: 285 agggagcaccgagaccgtcctgatgatcacgatcgtcacagaagccgtgattctgaaagg 344
           || || ||| |||| ||  |||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 329 agagaacacagagatcgctctgatgatcatgatcgccacagaagccgtgattctgaaagg 388

                     
Query: 345 agaagggacc 354
           ||||| ||||
Sbjct: 389 agaagagacc 398



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 64/70 (91%)
 Strand = Plus / Plus

                                                                       
Query: 138 agagaaaaagaaaaggacagggagcgccatagggaccgtgaccgagatagaggaagagac 197
           ||||||||||| ||||||||||| ||||| |||||||||||| ||||| |||||||||||
Sbjct: 164 agagaaaaagacaaggacagggaacgccacagggaccgtgacagagatcgaggaagagac 223

                     
Query: 198 agagatcggg 207
            |||||||||
Sbjct: 224 cgagatcggg 233
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>gb|AC135190.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0064H09, complete sequence
          Length = 146742

 Score =  119 bits (60), Expect = 7e-24
 Identities = 105/120 (87%)
 Strand = Plus / Plus

                                                                         
Query: 225   gacaaggatcgggatagggacaaggatcgggatcgtcaccaaaggcatcaccgtgagaaa 284
             |||| |||| |||| |||||||||||||||||||| ||||| |||||||||||||| | |
Sbjct: 20133 gacagggatagggacagggacaaggatcgggatcgccaccataggcatcaccgtgaaaga 20192

                                                                         
Query: 285   agggagcaccgagaccgtcctgatgatcacgatcgtcacagaagccgtgattctgaaagg 344
             || || ||| |||| ||  |||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 20193 agagaacacagagatcgctctgatgatcatgatcgccacagaagccgtgattctgaaagg 20252



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 64/70 (91%)
 Strand = Plus / Plus

                                                                         
Query: 138   agagaaaaagaaaaggacagggagcgccatagggaccgtgaccgagatagaggaagagac 197
             ||||||||||| ||||||||||| ||||| |||||||||||| ||||| |||||||||||
Sbjct: 20028 agagaaaaagacaaggacagggaacgccacagggaccgtgacagagatcgaggaagagac 20087

                       
Query: 198   agagatcggg 207
              |||||||||
Sbjct: 20088 cgagatcggg 20097
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>gb|AC136998.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
              OSJNBa0082P17, complete sequence
          Length = 157539

 Score =  119 bits (60), Expect = 7e-24
 Identities = 105/120 (87%)
 Strand = Plus / Plus

                                                                          
Query: 225    gacaaggatcgggatagggacaaggatcgggatcgtcaccaaaggcatcaccgtgagaaa 284
              |||| |||| |||| |||||||||||||||||||| ||||| |||||||||||||| | |
Sbjct: 127751 gacagggatagggacagggacaaggatcgggatcgccaccataggcatcaccgtgaaaga 127810

                                                                          
Query: 285    agggagcaccgagaccgtcctgatgatcacgatcgtcacagaagccgtgattctgaaagg 344
              || || ||| |||| ||  |||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 127811 agagaacacagagatcgctctgatgatcatgatcgccacagaagccgtgattctgaaagg 127870



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 64/70 (91%)
 Strand = Plus / Plus

                                                                          
Query: 138    agagaaaaagaaaaggacagggagcgccatagggaccgtgaccgagatagaggaagagac 197
              ||||||||||| ||||||||||| ||||| |||||||||||| ||||| |||||||||||
Sbjct: 127646 agagaaaaagacaaggacagggaacgccacagggaccgtgacagagatcgaggaagagac 127705

                        
Query: 198    agagatcggg 207
               |||||||||
Sbjct: 127706 cgagatcggg 127715
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  119 bits (60), Expect = 7e-24
 Identities = 105/120 (87%)
 Strand = Plus / Plus

                                                                            
Query: 225      gacaaggatcgggatagggacaaggatcgggatcgtcaccaaaggcatcaccgtgagaaa 284
                |||| |||| |||| |||||||||||||||||||| ||||| |||||||||||||| | |
Sbjct: 26717188 gacagggatagggacagggacaaggatcgggatcgccaccataggcatcaccgtgaaaga 26717247

                                                                            
Query: 285      agggagcaccgagaccgtcctgatgatcacgatcgtcacagaagccgtgattctgaaagg 344
                || || ||| |||| ||  |||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 26717248 agagaacacagagatcgctctgatgatcatgatcgccacagaagccgtgattctgaaagg 26717307



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 64/70 (91%)
 Strand = Plus / Plus

                                                                            
Query: 138      agagaaaaagaaaaggacagggagcgccatagggaccgtgaccgagatagaggaagagac 197
                ||||||||||| ||||||||||| ||||| |||||||||||| ||||| |||||||||||
Sbjct: 26717083 agagaaaaagacaaggacagggaacgccacagggaccgtgacagagatcgaggaagagac 26717142

                          
Query: 198      agagatcggg 207
                 |||||||||
Sbjct: 26717143 cgagatcggg 26717152
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  119 bits (60), Expect = 7e-24
 Identities = 105/120 (87%)
 Strand = Plus / Plus

                                                                            
Query: 225      gacaaggatcgggatagggacaaggatcgggatcgtcaccaaaggcatcaccgtgagaaa 284
                |||| |||| |||| |||||||||||||||||||| ||||| |||||||||||||| | |
Sbjct: 27042738 gacagggatagggacagggacaaggatcgggatcgccaccataggcatcaccgtgaaaga 27042797

                                                                            
Query: 285      agggagcaccgagaccgtcctgatgatcacgatcgtcacagaagccgtgattctgaaagg 344
                || || ||| |||| ||  |||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 27042798 agagaacacagagatcgctctgatgatcatgatcgccacagaagccgtgattctgaaagg 27042857



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 64/70 (91%)
 Strand = Plus / Plus

                                                                            
Query: 138      agagaaaaagaaaaggacagggagcgccatagggaccgtgaccgagatagaggaagagac 197
                ||||||||||| ||||||||||| ||||| |||||||||||| ||||| |||||||||||
Sbjct: 27042633 agagaaaaagacaaggacagggaacgccacagggaccgtgacagagatcgaggaagagac 27042692

                          
Query: 198      agagatcggg 207
                 |||||||||
Sbjct: 27042693 cgagatcggg 27042702
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>dbj|AK073768.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033068H24, full
           insert sequence
          Length = 2016

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 46/51 (90%)
 Strand = Plus / Plus

                                                              
Query: 332 tgattctgaaaggagaagggaccgtgagagagatggacatcacaggcatcg 382
           |||||||||||||||||| |||||||| |||||||| || | |||||||||
Sbjct: 476 tgattctgaaaggagaagagaccgtgacagagatggtcaccgcaggcatcg 526
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>dbj|AK059255.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-H08, full
           insert sequence
          Length = 2177

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 46/51 (90%)
 Strand = Plus / Plus

                                                              
Query: 332 tgattctgaaaggagaagggaccgtgagagagatggacatcacaggcatcg 382
           |||||||||||||||||| |||||||| |||||||| || | |||||||||
Sbjct: 475 tgattctgaaaggagaagagaccgtgacagagatggtcaccgcaggcatcg 525
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>gb|AY106657.1| Zea mays PCO074093 mRNA sequence
          Length = 864

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 49/56 (87%)
 Strand = Plus / Plus

                                                                   
Query: 330 cgtgattctgaaaggagaagggaccgtgagagagatggacatcacaggcatcgctc 385
           ||||||||||| |||||||| || ||||| |||||||| ||||  |||||||||||
Sbjct: 637 cgtgattctgagaggagaagagatcgtgacagagatggtcatcgtaggcatcgctc 692
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>gb|AY104538.1| Zea mays PCO122195 mRNA sequence
          Length = 1262

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                           
Query: 267 aggcatcaccgtgagaaaagggagcaccgagaccgtcctgatgatcac 314
           |||||||||||||| | | |||| || |||||||||||||||||||||
Sbjct: 362 aggcatcaccgtgaaagacgggaacagcgagaccgtcctgatgatcac 409
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>emb|CR855994.1| Wallaby DNA sequence from clone MEKBa-69G12, complete sequence
          Length = 174698

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 140    agaaaaagaaaaggacagggag 161
              ||||||||||||||||||||||
Sbjct: 155124 agaaaaagaaaaggacagggag 155103
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>gb|AC009464.8| Homo sapiens 12 BAC RP11-19E18 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 146945

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 137   cagagaaaaagaaaaggacagg 158
             ||||||||||||||||||||||
Sbjct: 55729 cagagaaaaagaaaaggacagg 55750
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>gb|BC082851.1| Xenopus laevis hypothetical LOC494751, mRNA (cDNA clone MGC:81632
            IMAGE:6864111), complete cds
          Length = 7873

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                      
Query: 138  agagaaaaagaaaaggacagggagcgccatagggaccgtgac 179
            ||||||| ||| | ||||||||||||  ||||||||||||||
Sbjct: 6856 agagaaagagagagggacagggagcgggatagggaccgtgac 6897
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>ref|XM_656973.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN4461.2), mRNA
          Length = 1572

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 169  gggaccgtgaccgagatagag 189
            |||||||||||||||||||||
Sbjct: 1205 gggaccgtgaccgagatagag 1225
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>gb|DQ388031.1| Aucoumea klaineana clone ak25 microsatellite sequence
          Length = 775

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 181 gagatagaggaagagacagagatcg 205
           ||||||||| |||||||||||||||
Sbjct: 508 gagatagagaaagagacagagatcg 484
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8,
              complete sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 137    cagagaaaaagaaaaggacag 157
              |||||||||||||||||||||
Sbjct: 953163 cagagaaaaagaaaaggacag 953183
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>dbj|AP004562.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0470F10
          Length = 185294

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 137    cagagaaaaagaaaaggacag 157
              |||||||||||||||||||||
Sbjct: 115901 cagagaaaaagaaaaggacag 115921
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>gb|AC160543.13| Mus musculus chromosome 1, clone RP23-186L22, complete sequence
          Length = 212353

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 138   agagaaaaagaaaaggacagggag 161
             ||||||||||||||||||| ||||
Sbjct: 46196 agagaaaaagaaaaggacaaggag 46173
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>gb|AE017345.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 5, complete
              sequence
          Length = 1507550

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 135    gacagagaaaaagaaaagga 154
              ||||||||||||||||||||
Sbjct: 237679 gacagagaaaaagaaaagga 237698
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>gb|AC125253.9| Mus musculus chromosome 1, clone RP24-141C2, complete sequence
          Length = 144529

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 138   agagaaaaagaaaaggacagggag 161
             ||||||||||||||||||| ||||
Sbjct: 59576 agagaaaaagaaaaggacaaggag 59553
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>gb|AC008255.9| Drosophila melanogaster clone BACR48D17, complete sequence
          Length = 183316

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 137   cagagaaaaagaaaaggaca 156
             ||||||||||||||||||||
Sbjct: 12540 cagagaaaaagaaaaggaca 12559
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>ref|XM_424756.1| PREDICTED: Gallus gallus similar to Splicing factor,
            arginine/serine-rich 12 (Serine-arginine-rich splicing
            regulatory protein 86) (SRrp86) (SR-related protein of 86
            kDa) (LOC427168), mRNA
          Length = 2304

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 135  gacagagaaaaagaaaagga 154
            ||||||||||||||||||||
Sbjct: 1270 gacagagaaaaagaaaagga 1289
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>ref|XM_416174.1| PREDICTED: Gallus gallus similar to down-regulated in metastasis
            (LOC417933), mRNA
          Length = 9393

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 264  caaaggcatcaccgtgagaa 283
            ||||||||||||||||||||
Sbjct: 6828 caaaggcatcaccgtgagaa 6809
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>gb|U23526.1| Caenorhabditis elegans cosmid C01C10, complete sequence
          Length = 22183

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 138   agagaaaaagaaaaggacag 157
             ||||||||||||||||||||
Sbjct: 16570 agagaaaaagaaaaggacag 16589
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>ref|XM_505124.1| Yarrowia lipolytica CLIB122, YALI0F07557g predicted mRNA
          Length = 2172

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 174  cgtgaccgagatagaggaagagacagagatcg 205
            ||||| |||||||||| | |||||||||||||
Sbjct: 1096 cgtgaacgagatagagaacgagacagagatcg 1127
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>gb|AC126567.8| Homo sapiens 3 BAC RP11-656G9 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 150746

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 181    gagatagaggaagagacaga 200
              ||||||||||||||||||||
Sbjct: 108691 gagatagaggaagagacaga 108672
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>ref|XM_785222.1| PREDICTED: Strongylocentrotus purpuratus similar to Beta-amyloid-like
            protein precursor (LOC585391), mRNA
          Length = 1884

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 181  gagatagaggaagagacagagatc 204
            ||||||||| ||||||||||||||
Sbjct: 1393 gagatagagcaagagacagagatc 1416
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>emb|AL161557.2|ATCHRIV57 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 57
          Length = 199577

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 133    gtgacagagaaaaagaaaag 152
              ||||||||||||||||||||
Sbjct: 143473 gtgacagagaaaaagaaaag 143492
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>emb|AL033545.2|ATF7K2 Arabidopsis thaliana DNA chromosome 4, BAC clone F7K2 (ESSA project)
          Length = 106702

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 133   gtgacagagaaaaagaaaag 152
             ||||||||||||||||||||
Sbjct: 94665 gtgacagagaaaaagaaaag 94684
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>ref|XM_694616.1| PREDICTED: Danio rerio similar to RD RNA-binding protein
           (LOC571062), mRNA
          Length = 981

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                           
Query: 192 agagacagagatcggggtcgggacagggatctagacaaggatcgggat 239
           |||||| ||||||| |  ||||||||||||| ||||| ||| ||||||
Sbjct: 238 agagaccgagatcgagaccgggacagggatcgagacagggaccgggat 285
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>gb|AC010706.8|AC010706 Drosophila melanogaster, chromosome X, region 13C-13E, BAC clone
            BACR36D15, complete sequence
          Length = 159513

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 137  cagagaaaaagaaaaggaca 156
            ||||||||||||||||||||
Sbjct: 3843 cagagaaaaagaaaaggaca 3824
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 345      agaagggaccgtgagagagatgga 368
                ||||||||||| ||||||||||||
Sbjct: 17506188 agaagggaccgagagagagatgga 17506211
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 128      ggatcgtgacagagaaaaagaaaa 151
                ||||||||||| ||||||||||||
Sbjct: 13005340 ggatcgtgacatagaaaaagaaaa 13005363
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>dbj|AP003763.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0531C01
          Length = 158574

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 128   ggatcgtgacagagaaaaagaaaa 151
             ||||||||||| ||||||||||||
Sbjct: 44141 ggatcgtgacatagaaaaagaaaa 44164
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>dbj|AP003619.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0577H07
          Length = 126757

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 128   ggatcgtgacagagaaaaagaaaa 151
             ||||||||||| ||||||||||||
Sbjct: 87717 ggatcgtgacatagaaaaagaaaa 87740
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>dbj|AK070901.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023073O19, full
           insert sequence
          Length = 457

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 345 agaagggaccgtgagagagatgga 368
           ||||||||||| ||||||||||||
Sbjct: 64  agaagggaccgagagagagatgga 41
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>gb|AE003498.5| Drosophila melanogaster chromosome X, section 50 of 74 of the complete
              sequence
          Length = 341520

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 137    cagagaaaaagaaaaggaca 156
              ||||||||||||||||||||
Sbjct: 303201 cagagaaaaagaaaaggaca 303182
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 345      agaagggaccgtgagagagatgga 368
                ||||||||||| ||||||||||||
Sbjct: 17460559 agaagggaccgagagagagatgga 17460582
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>emb|AL731763.1|CNS07YQA Oryza sativa chromosome 12, . BAC OSJNBa0090O14 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 129619

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 345   agaagggaccgtgagagagatgga 368
             ||||||||||| ||||||||||||
Sbjct: 26218 agaagggaccgagagagagatgga 26195
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>gb|AC145933.3| Gallus gallus BAC clone CH261-41E11 from chromosome unknown, complete
             sequence
          Length = 209915

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 138   agagaaaaagaaaaggacag 157
             ||||||||||||||||||||
Sbjct: 91389 agagaaaaagaaaaggacag 91408
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>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica
          Length = 4003362

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                               
Query: 174     cgtgaccgagatagaggaagagacagagatcg 205
               ||||| |||||||||| | |||||||||||||
Sbjct: 1090981 cgtgaacgagatagagaacgagacagagatcg 1091012
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>emb|AL773527.8| Pig DNA sequence from clone XX-707F1, complete sequence
          Length = 137286

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                             
Query: 192   agagacagagatcggggtcgggacagggatctagacaaggatcgggat 239
             |||||| ||||||| |  ||||||||||||| ||||| ||| ||||||
Sbjct: 16598 agagaccgagatcgagaccgggacagggatcgagacagggaccgggat 16645


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,629,848
Number of Sequences: 3902068
Number of extensions: 3629848
Number of successful extensions: 85506
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 85174
Number of HSP's gapped (non-prelim): 324
length of query: 385
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 363
effective length of database: 17,147,199,772
effective search space: 6224433517236
effective search space used: 6224433517236
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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