ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal13p13
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_463328.1| Oryza sativa (japonica cultivar-group), predic... 220 3e-54
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 220 3e-54
3dbj|AP003334.4| Oryza sativa (japonica cultivar-group) genomic D... 220 3e-54
4dbj|AK099914.1| Oryza sativa (japonica cultivar-group) cDNA clon... 220 3e-54
5dbj|AK072379.1| Oryza sativa (japonica cultivar-group) cDNA clon... 220 3e-54
6gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 50 0.006
7dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.006
8gb|AC107225.2| Oryza sativa (japonica cultivar-group) chromosome... 50 0.006
9dbj|AK066554.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.006
10gb|AC137928.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.7
11gb|AC137620.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.7
12ref|XM_904120.2| PREDICTED: Mus musculus similar to hormonally u... 40 5.7
13gb|AY900145.1| Crimean-Congo hemorrhagic fever virus strain Hy13... 40 5.7
14emb|AL133413.5| Human DNA sequence from clone RP11-54K22 on chro... 40 5.7
15gb|AY164724.1| Gallus gallus RTN1-A (RTN1) mRNA, complete cds 40 5.7
16gb|CP000089.1| Dechloromonas aromatica RCB, complete genome 40 5.7
17dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 40 5.7
18dbj|AK147425.1| Mus musculus cDNA, RIKEN full-length enriched li... 40 5.7
19gb|AC079098.5| Homo sapiens chromosome 8, clone RP11-157N24, com... 40 5.7
20dbj|AK144639.1| Mus musculus lung RCB-0558 LLC cDNA, RIKEN full-... 40 5.7
21dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
22ref|NM_001001466.1| Gallus gallus reticulon 1 (RTN1), mRNA 40 5.7
23gb|AC133505.3| Mus musculus BAC clone RP24-176M20 from chromosom... 40 5.7
24gb|AF167987.1|AF167987 Mus musculus hormonally upregulated neu t... 40 5.7
25dbj|AK068553.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.7
26emb|BX511172.6| Zebrafish DNA sequence from clone DKEY-13K23 in ... 40 5.7
27gb|AF055919.2|AF055919 Mus musculus putative serine/threonine pr... 40 5.7
28emb|AL109628.5|CNS018OT Human chromosome 14 DNA sequence BAC R-5... 40 5.7
29gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 40 5.7
30gb|U17606.1|GGU17606 Gallus gallus chS-Rex-b mRNA, complete cds 40 5.7
31gb|AC140250.3| Mus musculus BAC clone RP24-288J3 from 1, complet... 40 5.7
32ref|NM_015755.1| Mus musculus hormonally upregulated Neu-associa... 40 5.7 
>ref|XM_463328.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1560

 Score =  220 bits (111), Expect = 3e-54
 Identities = 228/267 (85%)
 Strand = Plus / Plus

                                                                        
Query: 137  atggccagtctcccatccttcaaatgggcaaccgctgctggcgcgcggatcggctgtgtc 196
            |||||||| | ||||||||||||||||||||||||   ||| || || || |||||||||
Sbjct: 1222 atggccagccgcccatccttcaaatgggcaaccgcgaatggtgctcgcattggctgtgtc 1281

                                                                        
Query: 197  cgcgactacccggctgatctccagagcatggctcttgagcatgtcaatctgtcaccaaga 256
            || ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 1282 cgggactacccggctgatctacagagcatggctcttgagcatgtcaatctttcaccaaga 1341

                                                                        
Query: 257  ttggtgccgtctccgagtgcgaataggctgcccatcccgtcacctcggccgagccccaag 316
             ||||||| ||||| | | | || |||||||| || ||||| |||||||| ||||| |||
Sbjct: 1342 gtggtgccctctcctactacaaacaggctgccgataccgtctcctcggccaagcccgaag 1401

                                                                        
Query: 317  accaggctgtctccccggctgcactacatgggccttcctacacccaccggccgccggctt 376
            | ||||||||| ||  |||||||||||||||| || || || || |||||  ||  ||| 
Sbjct: 1402 atcaggctgtcacctaggctgcactacatgggtctcccgacgcctaccggttgcaagctc 1461

                                       
Query: 377  ccgatcccgagcccggaaatcaggagg 403
            ||||||||||||||||| |||||||||
Sbjct: 1462 ccgatcccgagcccggagatcaggagg 1488
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  220 bits (111), Expect = 3e-54
 Identities = 228/267 (85%)
 Strand = Plus / Minus

                                                                            
Query: 137      atggccagtctcccatccttcaaatgggcaaccgctgctggcgcgcggatcggctgtgtc 196
                |||||||| | ||||||||||||||||||||||||   ||| || || || |||||||||
Sbjct: 21896816 atggccagccgcccatccttcaaatgggcaaccgcgaatggtgctcgcattggctgtgtc 21896757

                                                                            
Query: 197      cgcgactacccggctgatctccagagcatggctcttgagcatgtcaatctgtcaccaaga 256
                || ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 21896756 cgggactacccggctgatctacagagcatggctcttgagcatgtcaatctttcaccaaga 21896697

                                                                            
Query: 257      ttggtgccgtctccgagtgcgaataggctgcccatcccgtcacctcggccgagccccaag 316
                 ||||||| ||||| | | | || |||||||| || ||||| |||||||| ||||| |||
Sbjct: 21896696 gtggtgccctctcctactacaaacaggctgccgataccgtctcctcggccaagcccgaag 21896637

                                                                            
Query: 317      accaggctgtctccccggctgcactacatgggccttcctacacccaccggccgccggctt 376
                | ||||||||| ||  |||||||||||||||| || || || || |||||  ||  ||| 
Sbjct: 21896636 atcaggctgtcacctaggctgcactacatgggtctcccgacgcctaccggttgcaagctc 21896577

                                           
Query: 377      ccgatcccgagcccggaaatcaggagg 403
                ||||||||||||||||| |||||||||
Sbjct: 21896576 ccgatcccgagcccggagatcaggagg 21896550
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>dbj|AP003334.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1114B07
          Length = 148060

 Score =  220 bits (111), Expect = 3e-54
 Identities = 228/267 (85%)
 Strand = Plus / Minus

                                                                          
Query: 137    atggccagtctcccatccttcaaatgggcaaccgctgctggcgcgcggatcggctgtgtc 196
              |||||||| | ||||||||||||||||||||||||   ||| || || || |||||||||
Sbjct: 126109 atggccagccgcccatccttcaaatgggcaaccgcgaatggtgctcgcattggctgtgtc 126050

                                                                          
Query: 197    cgcgactacccggctgatctccagagcatggctcttgagcatgtcaatctgtcaccaaga 256
              || ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 126049 cgggactacccggctgatctacagagcatggctcttgagcatgtcaatctttcaccaaga 125990

                                                                          
Query: 257    ttggtgccgtctccgagtgcgaataggctgcccatcccgtcacctcggccgagccccaag 316
               ||||||| ||||| | | | || |||||||| || ||||| |||||||| ||||| |||
Sbjct: 125989 gtggtgccctctcctactacaaacaggctgccgataccgtctcctcggccaagcccgaag 125930

                                                                          
Query: 317    accaggctgtctccccggctgcactacatgggccttcctacacccaccggccgccggctt 376
              | ||||||||| ||  |||||||||||||||| || || || || |||||  ||  ||| 
Sbjct: 125929 atcaggctgtcacctaggctgcactacatgggtctcccgacgcctaccggttgcaagctc 125870

                                         
Query: 377    ccgatcccgagcccggaaatcaggagg 403
              ||||||||||||||||| |||||||||
Sbjct: 125869 ccgatcccgagcccggagatcaggagg 125843
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>dbj|AK099914.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116E17, full
            insert sequence
          Length = 2167

 Score =  220 bits (111), Expect = 3e-54
 Identities = 228/267 (85%)
 Strand = Plus / Plus

                                                                        
Query: 137  atggccagtctcccatccttcaaatgggcaaccgctgctggcgcgcggatcggctgtgtc 196
            |||||||| | ||||||||||||||||||||||||   ||| || || || |||||||||
Sbjct: 1528 atggccagccgcccatccttcaaatgggcaaccgcgaatggtgctcgcattggctgtgtc 1587

                                                                        
Query: 197  cgcgactacccggctgatctccagagcatggctcttgagcatgtcaatctgtcaccaaga 256
            || ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 1588 cgggactacccggctgatctacagagcatggctcttgagcatgtcaatctttcaccaaga 1647

                                                                        
Query: 257  ttggtgccgtctccgagtgcgaataggctgcccatcccgtcacctcggccgagccccaag 316
             ||||||| ||||| | | | || |||||||| || ||||| |||||||| ||||| |||
Sbjct: 1648 gtggtgccctctcctactacaaacaggctgccgataccgtctcctcggccaagcccgaag 1707

                                                                        
Query: 317  accaggctgtctccccggctgcactacatgggccttcctacacccaccggccgccggctt 376
            | ||||||||| ||  |||||||||||||||| || || || || |||||  ||  ||| 
Sbjct: 1708 atcaggctgtcacctaggctgcactacatgggtctcccgacgcctaccggttgcaagctc 1767

                                       
Query: 377  ccgatcccgagcccggaaatcaggagg 403
            ||||||||||||||||| |||||||||
Sbjct: 1768 ccgatcccgagcccggagatcaggagg 1794
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>dbj|AK072379.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023073F24, full
            insert sequence
          Length = 2166

 Score =  220 bits (111), Expect = 3e-54
 Identities = 228/267 (85%)
 Strand = Plus / Plus

                                                                        
Query: 137  atggccagtctcccatccttcaaatgggcaaccgctgctggcgcgcggatcggctgtgtc 196
            |||||||| | ||||||||||||||||||||||||   ||| || || || |||||||||
Sbjct: 1527 atggccagccgcccatccttcaaatgggcaaccgcgaatggtgctcgcattggctgtgtc 1586

                                                                        
Query: 197  cgcgactacccggctgatctccagagcatggctcttgagcatgtcaatctgtcaccaaga 256
            || ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 1587 cgggactacccggctgatctacagagcatggctcttgagcatgtcaatctttcaccaaga 1646

                                                                        
Query: 257  ttggtgccgtctccgagtgcgaataggctgcccatcccgtcacctcggccgagccccaag 316
             ||||||| ||||| | | | || |||||||| || ||||| |||||||| ||||| |||
Sbjct: 1647 gtggtgccctctcctactacaaacaggctgccgataccgtctcctcggccaagcccgaag 1706

                                                                        
Query: 317  accaggctgtctccccggctgcactacatgggccttcctacacccaccggccgccggctt 376
            | ||||||||| ||  |||||||||||||||| || || || || |||||  ||  ||| 
Sbjct: 1707 atcaggctgtcacctaggctgcactacatgggtctcccgacgcctaccggttgcaagctc 1766

                                       
Query: 377  ccgatcccgagcccggaaatcaggagg 403
            ||||||||||||||||| |||||||||
Sbjct: 1767 ccgatcccgagcccggagatcaggagg 1793
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                            
Query: 180     cgcggatcggctgtgtccgcgactacccg 208
               ||||||||||||| |||||||||||||||
Sbjct: 3613162 cgcggatcggctgcgtccgcgactacccg 3613134
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                            
Query: 180     cgcggatcggctgtgtccgcgactacccg 208
               ||||||||||||| |||||||||||||||
Sbjct: 3613273 cgcggatcggctgcgtccgcgactacccg 3613245
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>gb|AC107225.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0026H19,
              complete sequence
          Length = 150620

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                           
Query: 180    cgcggatcggctgtgtccgcgactacccg 208
              ||||||||||||| |||||||||||||||
Sbjct: 130815 cgcggatcggctgcgtccgcgactacccg 130787
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>dbj|AK066554.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013073I08, full
            insert sequence
          Length = 2525

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                         
Query: 180  cgcggatcggctgtgtccgcgactacccg 208
            ||||||||||||| |||||||||||||||
Sbjct: 2222 cgcggatcggctgcgtccgcgactacccg 2250
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>gb|AC137928.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0040B10,
              complete sequence
          Length = 150825

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 164    gcaaccgctgctggcgcgcg 183
              ||||||||||||||||||||
Sbjct: 121739 gcaaccgctgctggcgcgcg 121758
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>gb|AC137620.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0014K18, complete sequence
          Length = 123508

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 164   gcaaccgctgctggcgcgcg 183
             ||||||||||||||||||||
Sbjct: 46289 gcaaccgctgctggcgcgcg 46308
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>ref|XM_904120.2| PREDICTED: Mus musculus similar to hormonally upregulated
            Neu-associated kinase (LOC630567), mRNA
          Length = 3668

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 143  agtctcccatccttcaaatg 162
            ||||||||||||||||||||
Sbjct: 3146 agtctcccatccttcaaatg 3165
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>gb|AY900145.1| Crimean-Congo hemorrhagic fever virus strain Hy13 segment M, complete
            sequence
          Length = 5070

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 133  caagatggccagtctcccat 152
            ||||||||||||||||||||
Sbjct: 4118 caagatggccagtctcccat 4099
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>emb|AL133413.5| Human DNA sequence from clone RP11-54K22 on chromosome 9q34.11-34.2
             Contains a NADH dehydrogenase 3, mitochondrial (MTND3)
             pseudogene, complete sequence
          Length = 157790

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 143   agtctcccatccttcaaatg 162
             ||||||||||||||||||||
Sbjct: 63246 agtctcccatccttcaaatg 63265
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>gb|AY164724.1| Gallus gallus RTN1-A (RTN1) mRNA, complete cds
          Length = 3187

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 73   gatggacattatcaaggaag 92
            ||||||||||||||||||||
Sbjct: 1536 gatggacattatcaaggaag 1555
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>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome
          Length = 4501104

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 93      tggttgccgaggacaatgcg 112
               ||||||||||||||||||||
Sbjct: 1908179 tggttgccgaggacaatgcg 1908160
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>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 164     gcaaccgctgctggcgcgcg 183
               ||||||||||||||||||||
Sbjct: 3536114 gcaaccgctgctggcgcgcg 3536133
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>dbj|AK147425.1| Mus musculus cDNA, RIKEN full-length enriched library,
            clone:M5C1039G04 product:hormonally upregulated
            Neu-associated kinase, full insert sequence
          Length = 5391

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 143  agtctcccatccttcaaatg 162
            ||||||||||||||||||||
Sbjct: 4871 agtctcccatccttcaaatg 4890
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>gb|AC079098.5| Homo sapiens chromosome 8, clone RP11-157N24, complete sequence
          Length = 158119

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 310   ccccaagaccaggctgtctc 329
             ||||||||||||||||||||
Sbjct: 24275 ccccaagaccaggctgtctc 24256
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>dbj|AK144639.1| Mus musculus lung RCB-0558 LLC cDNA, RIKEN full-length enriched
            library, clone:G730016E05 product:hormonally upregulated
            Neu-associated kinase, full insert sequence
          Length = 4988

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 143  agtctcccatccttcaaatg 162
            ||||||||||||||||||||
Sbjct: 4468 agtctcccatccttcaaatg 4487
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 164      gcaaccgctgctggcgcgcg 183
                ||||||||||||||||||||
Sbjct: 19793665 gcaaccgctgctggcgcgcg 19793684
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>ref|NM_001001466.1| Gallus gallus reticulon 1 (RTN1), mRNA
          Length = 3187

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 73   gatggacattatcaaggaag 92
            ||||||||||||||||||||
Sbjct: 1536 gatggacattatcaaggaag 1555
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>gb|AC133505.3| Mus musculus BAC clone RP24-176M20 from chromosome 16, complete sequence
          Length = 149947

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 143    agtctcccatccttcaaatg 162
              ||||||||||||||||||||
Sbjct: 110330 agtctcccatccttcaaatg 110311
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>gb|AF167987.1|AF167987 Mus musculus hormonally upregulated neu tumor-associated kinase
            (Hunk) mRNA, complete cds
          Length = 5024

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 143  agtctcccatccttcaaatg 162
            ||||||||||||||||||||
Sbjct: 4479 agtctcccatccttcaaatg 4498
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>dbj|AK068553.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013155K07, full
           insert sequence
          Length = 1998

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 164 gcaaccgctgctggcgcgcg 183
           ||||||||||||||||||||
Sbjct: 336 gcaaccgctgctggcgcgcg 317
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>emb|BX511172.6| Zebrafish DNA sequence from clone DKEY-13K23 in linkage group 4,
             complete sequence
          Length = 249278

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 3     aaatggaagaacatgacgag 22
             ||||||||||||||||||||
Sbjct: 68593 aaatggaagaacatgacgag 68612
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>gb|AF055919.2|AF055919 Mus musculus putative serine/threonine protein kinase MAK-V (Mak-v)
            mRNA, complete cds
          Length = 5026

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 143  agtctcccatccttcaaatg 162
            ||||||||||||||||||||
Sbjct: 4484 agtctcccatccttcaaatg 4503
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>emb|AL109628.5|CNS018OT Human chromosome 14 DNA sequence BAC R-545M17 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 209817

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 242    aatctgtcaccaagattggt 261
              ||||||||||||||||||||
Sbjct: 113937 aatctgtcaccaagattggt 113918
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>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 164     gcaaccgctgctggcgcgcg 183
               ||||||||||||||||||||
Sbjct: 3531635 gcaaccgctgctggcgcgcg 3531654
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>gb|U17606.1|GGU17606 Gallus gallus chS-Rex-b mRNA, complete cds
          Length = 3187

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 73   gatggacattatcaaggaag 92
            ||||||||||||||||||||
Sbjct: 1536 gatggacattatcaaggaag 1555
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>gb|AC140250.3| Mus musculus BAC clone RP24-288J3 from 1, complete sequence
          Length = 163490

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 392   gaaatcaggaggcagcagtt 411
             ||||||||||||||||||||
Sbjct: 67724 gaaatcaggaggcagcagtt 67743
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>ref|NM_015755.1| Mus musculus hormonally upregulated Neu-associated kinase (Hunk),
            mRNA
          Length = 5026

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 143  agtctcccatccttcaaatg 162
            ||||||||||||||||||||
Sbjct: 4484 agtctcccatccttcaaatg 4503


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,388,977
Number of Sequences: 3902068
Number of extensions: 3388977
Number of successful extensions: 74869
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 74625
Number of HSP's gapped (non-prelim): 234
length of query: 428
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 406
effective length of database: 17,147,199,772
effective search space: 6961763107432
effective search space used: 6961763107432
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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