ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal13p06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_472910.1| Oryza sativa (japonica cultivar-group), predic... 190 4e-45
2emb|AL606614.3|OSJN00047 Oryza sativa genomic DNA, chromosome 4,... 190 4e-45
3dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 190 4e-45
4emb|AL442104.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 190 4e-45
5ref|XM_472909.1| Oryza sativa (japonica cultivar-group), predic... 121 3e-24
6dbj|AK109889.1| Oryza sativa (japonica cultivar-group) cDNA clon... 121 3e-24
7ref|XM_472911.1| Oryza sativa (japonica cultivar-group), predic... 46 0.14
8dbj|AK119297.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.14
9ref|NM_001016221.2| Xenopus tropicalis hypothetical protein LOC5... 42 2.2
10gb|AC158384.2| Mus musculus BAC clone RP24-97I24 from chromosome... 42 2.2
11gb|AC156640.2| Mus musculus BAC clone RP23-313M2 from chromosome... 42 2.2
12emb|CR926305.2| Xenopus tropicalis finished cDNA, clone TEgg078c13 42 2.2
13gb|AC004829.2| Homo sapiens PAC clone RP4-530J23 from 7, complet... 40 8.8
14gb|AC146161.2| Pan troglodytes BAC clone RP43-1G6 from 7, comple... 40 8.8
15gb|AC145091.1| Pan troglodytes BAC clone RP43-12F8 from 7, compl... 40 8.8
16emb|AL731573.8| Human DNA sequence from clone RP11-215C13 on chr... 40 8.8
17emb|AL021879.3|HS209B9 Human DNA sequence from clone RP1-209B9 o... 40 8.8
18emb|AL589651.8| Mouse DNA sequence from clone RP23-138F20 on chr... 40 8.8
19emb|BX511073.3| Zebrafish DNA sequence from clone DKEY-245I10 in... 40 8.8
20gb|AC026362.38| Homo sapiens 12 BAC RP11-197N18 (Roswell Park Ca... 40 8.8
21gb|AF275265.3|AF275265 Mus musculus receptor protein tyrosine ph... 40 8.8
22gb|AC132956.4| Mus musculus BAC clone RP23-106K20 from chromosom... 40 8.8
23gb|AC175034.1| Mus musculus BAC clone RP23-204E23 from chromosom... 40 8.8
24emb|AL935283.16| Zebrafish DNA sequence from clone CH211-247O1 i... 40 8.8
25gb|BC089118.1| Xenopus laevis mis5p, mRNA (cDNA clone MGC:85070 ... 40 8.8
26gb|U44050.1|XLU44050 Xenopus laevis mis5 mRNA, complete cds 40 8.8
27emb|AL591586.8| Mouse DNA sequence from clone RP23-126L18 on chr... 40 8.8

>ref|XM_472910.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1653

 Score =  190 bits (96), Expect = 4e-45
 Identities = 258/312 (82%)
 Strand = Plus / Plus

                                                                        
Query: 15   tgggtccgtgcgatgaatcgaacgcttggaactacacctccacgtatgagcttgtgctga 74
            ||||||| || |||||||| ||||||||||||||||| || ||  | ||| | || ||| 
Sbjct: 1265 tgggtccatgtgatgaatcaaacgcttggaactacacatcaacacacgagttggtactgc 1324

                                                                        
Query: 75   aacaaactgggcaatgccttgaggccaagtctgtgggtgatactgcaaagctcgggactg 134
            |||| ||||| ||||||||  ||| ||||||||| ||||| | |||| |||| ||||| |
Sbjct: 1325 aacacactggtcaatgcctccaggtcaagtctgtcggtgagaatgcacagcttgggaccg 1384

                                                                        
Query: 135  gctgcagcaaatcctgttcgaagtggcagctaatatctgattcaggaatgcatgtttcgg 194
              |||||||||||| |||| |||||||||||||||||  |||||||||||||||||||| 
Sbjct: 1385 attgcagcaaatccagttcaaagtggcagctaatatcaaattcaggaatgcatgtttcga 1444

                                                                        
Query: 195  ccgaactcaccaagaatgggactagagtgtgcttggatgcgggccctgacggtgtcatca 254
            | |||||||| || ||||| || ||||| ||| |||||||    ||||| ||| ||||||
Sbjct: 1445 ctgaactcactaaaaatggaaccagagtatgcctggatgccactcctgatggtatcatca 1504

                                                                        
Query: 255  caacggatcaatgcaagtgcctgaccgaagatccaacctgcgaccctgagagccagtggt 314
            ||||  |||  ||||||||||| |||| ||||||||  ||| | ||||||||||||||||
Sbjct: 1505 caacaaatccgtgcaagtgcctaaccggagatccaaattgcaatcctgagagccagtggt 1564

                        
Query: 315  tcaaagttatat 326
            ||||| ||||||
Sbjct: 1565 tcaaaattatat 1576



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>emb|AL606614.3|OSJN00047 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0011N17,
             complete sequence
          Length = 129498

 Score =  190 bits (96), Expect = 4e-45
 Identities = 258/312 (82%)
 Strand = Plus / Plus

                                                                         
Query: 15    tgggtccgtgcgatgaatcgaacgcttggaactacacctccacgtatgagcttgtgctga 74
             ||||||| || |||||||| ||||||||||||||||| || ||  | ||| | || ||| 
Sbjct: 35337 tgggtccatgtgatgaatcaaacgcttggaactacacatcaacacacgagttggtactgc 35396

                                                                         
Query: 75    aacaaactgggcaatgccttgaggccaagtctgtgggtgatactgcaaagctcgggactg 134
             |||| ||||| ||||||||  ||| ||||||||| ||||| | |||| |||| ||||| |
Sbjct: 35397 aacacactggtcaatgcctccaggtcaagtctgtcggtgagaatgcacagcttgggaccg 35456

                                                                         
Query: 135   gctgcagcaaatcctgttcgaagtggcagctaatatctgattcaggaatgcatgtttcgg 194
               |||||||||||| |||| |||||||||||||||||  |||||||||||||||||||| 
Sbjct: 35457 attgcagcaaatccagttcaaagtggcagctaatatcaaattcaggaatgcatgtttcga 35516

                                                                         
Query: 195   ccgaactcaccaagaatgggactagagtgtgcttggatgcgggccctgacggtgtcatca 254
             | |||||||| || ||||| || ||||| ||| |||||||    ||||| ||| ||||||
Sbjct: 35517 ctgaactcactaaaaatggaaccagagtatgcctggatgccactcctgatggtatcatca 35576

                                                                         
Query: 255   caacggatcaatgcaagtgcctgaccgaagatccaacctgcgaccctgagagccagtggt 314
             ||||  |||  ||||||||||| |||| ||||||||  ||| | ||||||||||||||||
Sbjct: 35577 caacaaatccgtgcaagtgcctaaccggagatccaaattgcaatcctgagagccagtggt 35636

                         
Query: 315   tcaaagttatat 326
             ||||| ||||||
Sbjct: 35637 tcaaaattatat 35648



 Score =  121 bits (61), Expect = 3e-24
 Identities = 205/253 (81%)
 Strand = Plus / Plus

                                                                         
Query: 74    aaacaaactgggcaatgccttgaggccaagtctgtgggtgatactgcaaagctcgggact 133
             ||||||||||| ||||||||  |||| |||||||| ||||| | ||||||||| || || 
Sbjct: 30521 aaacaaactggacaatgcctccaggcgaagtctgttggtgagaatgcaaagcttggcacc 30580

                                                                         
Query: 134   ggctgcagcaaatcctgttcgaagtggcagctaatatctgattcaggaatgcatgtttcg 193
              | |||||||||||| |||| |||||| ||||| ||||  ||||||||||||||||||| 
Sbjct: 30581 agttgcagcaaatccagttcaaagtggaagctactatcaaattcaggaatgcatgtttca 30640

                                                                         
Query: 194   gccgaactcaccaagaatgggactagagtgtgcttggatgcgggccctgacggtgtcatc 253
              | ||||||||||| || || || ||||| |||||||| ||  | ||||| ||    |||
Sbjct: 30641 actgaactcaccaataacggaaccagagtatgcttggaggccagtcctgatggaaatatc 30700

                                                                         
Query: 254   acaacggatcaatgcaagtgcctgaccgaagatccaacctgcgaccctgagagccagtgg 313
             || ||  |||| ||||||||||| |||| |||||| |  ||| | |||||||| ||||||
Sbjct: 30701 acgacaaatcagtgcaagtgcctaaccgtagatccgaattgcaatcctgagagtcagtgg 30760

                          
Query: 314   ttcaaagttatat 326
             |||||| ||||||
Sbjct: 30761 ttcaaaattatat 30773



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 292   ctgcgaccctgagagccagtggttcaa 318
             ||||||||| |||||||||||||||||
Sbjct: 39827 ctgcgacccggagagccagtggttcaa 39853



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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  190 bits (96), Expect = 4e-45
 Identities = 258/312 (82%)
 Strand = Plus / Plus

                                                                            
Query: 15       tgggtccgtgcgatgaatcgaacgcttggaactacacctccacgtatgagcttgtgctga 74
                ||||||| || |||||||| ||||||||||||||||| || ||  | ||| | || ||| 
Sbjct: 24038358 tgggtccatgtgatgaatcaaacgcttggaactacacatcaacacacgagttggtactgc 24038417

                                                                            
Query: 75       aacaaactgggcaatgccttgaggccaagtctgtgggtgatactgcaaagctcgggactg 134
                |||| ||||| ||||||||  ||| ||||||||| ||||| | |||| |||| ||||| |
Sbjct: 24038418 aacacactggtcaatgcctccaggtcaagtctgtcggtgagaatgcacagcttgggaccg 24038477

                                                                            
Query: 135      gctgcagcaaatcctgttcgaagtggcagctaatatctgattcaggaatgcatgtttcgg 194
                  |||||||||||| |||| |||||||||||||||||  |||||||||||||||||||| 
Sbjct: 24038478 attgcagcaaatccagttcaaagtggcagctaatatcaaattcaggaatgcatgtttcga 24038537

                                                                            
Query: 195      ccgaactcaccaagaatgggactagagtgtgcttggatgcgggccctgacggtgtcatca 254
                | |||||||| || ||||| || ||||| ||| |||||||    ||||| ||| ||||||
Sbjct: 24038538 ctgaactcactaaaaatggaaccagagtatgcctggatgccactcctgatggtatcatca 24038597

                                                                            
Query: 255      caacggatcaatgcaagtgcctgaccgaagatccaacctgcgaccctgagagccagtggt 314
                ||||  |||  ||||||||||| |||| ||||||||  ||| | ||||||||||||||||
Sbjct: 24038598 caacaaatccgtgcaagtgcctaaccggagatccaaattgcaatcctgagagccagtggt 24038657

                            
Query: 315      tcaaagttatat 326
                ||||| ||||||
Sbjct: 24038658 tcaaaattatat 24038669



 Score =  121 bits (61), Expect = 3e-24
 Identities = 205/253 (81%)
 Strand = Plus / Plus

                                                                            
Query: 74       aaacaaactgggcaatgccttgaggccaagtctgtgggtgatactgcaaagctcgggact 133
                ||||||||||| ||||||||  |||| |||||||| ||||| | ||||||||| || || 
Sbjct: 24033542 aaacaaactggacaatgcctccaggcgaagtctgttggtgagaatgcaaagcttggcacc 24033601

                                                                            
Query: 134      ggctgcagcaaatcctgttcgaagtggcagctaatatctgattcaggaatgcatgtttcg 193
                 | |||||||||||| |||| |||||| ||||| ||||  ||||||||||||||||||| 
Sbjct: 24033602 agttgcagcaaatccagttcaaagtggaagctactatcaaattcaggaatgcatgtttca 24033661

                                                                            
Query: 194      gccgaactcaccaagaatgggactagagtgtgcttggatgcgggccctgacggtgtcatc 253
                 | ||||||||||| || || || ||||| |||||||| ||  | ||||| ||    |||
Sbjct: 24033662 actgaactcaccaataacggaaccagagtatgcttggaggccagtcctgatggaaatatc 24033721

                                                                            
Query: 254      acaacggatcaatgcaagtgcctgaccgaagatccaacctgcgaccctgagagccagtgg 313
                || ||  |||| ||||||||||| |||| |||||| |  ||| | |||||||| ||||||
Sbjct: 24033722 acgacaaatcagtgcaagtgcctaaccgtagatccgaattgcaatcctgagagtcagtgg 24033781

                             
Query: 314      ttcaaagttatat 326
                |||||| ||||||
Sbjct: 24033782 ttcaaaattatat 24033794



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                           
Query: 292      ctgcgaccctgagagccagtggttcaa 318
                ||||||||| |||||||||||||||||
Sbjct: 24042848 ctgcgacccggagagccagtggttcaa 24042874



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>emb|AL442104.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0510A06, complete
            sequence
          Length = 90767

 Score =  190 bits (96), Expect = 4e-45
 Identities = 258/312 (82%)
 Strand = Plus / Plus

                                                                        
Query: 15   tgggtccgtgcgatgaatcgaacgcttggaactacacctccacgtatgagcttgtgctga 74
            ||||||| || |||||||| ||||||||||||||||| || ||  | ||| | || ||| 
Sbjct: 4608 tgggtccatgtgatgaatcaaacgcttggaactacacatcaacacacgagttggtactgc 4667

                                                                        
Query: 75   aacaaactgggcaatgccttgaggccaagtctgtgggtgatactgcaaagctcgggactg 134
            |||| ||||| ||||||||  ||| ||||||||| ||||| | |||| |||| ||||| |
Sbjct: 4668 aacacactggtcaatgcctccaggtcaagtctgtcggtgagaatgcacagcttgggaccg 4727

                                                                        
Query: 135  gctgcagcaaatcctgttcgaagtggcagctaatatctgattcaggaatgcatgtttcgg 194
              |||||||||||| |||| |||||||||||||||||  |||||||||||||||||||| 
Sbjct: 4728 attgcagcaaatccagttcaaagtggcagctaatatcaaattcaggaatgcatgtttcga 4787

                                                                        
Query: 195  ccgaactcaccaagaatgggactagagtgtgcttggatgcgggccctgacggtgtcatca 254
            | |||||||| || ||||| || ||||| ||| |||||||    ||||| ||| ||||||
Sbjct: 4788 ctgaactcactaaaaatggaaccagagtatgcctggatgccactcctgatggtatcatca 4847

                                                                        
Query: 255  caacggatcaatgcaagtgcctgaccgaagatccaacctgcgaccctgagagccagtggt 314
            ||||  |||  ||||||||||| |||| ||||||||  ||| | ||||||||||||||||
Sbjct: 4848 caacaaatccgtgcaagtgcctaaccggagatccaaattgcaatcctgagagccagtggt 4907

                        
Query: 315  tcaaagttatat 326
            ||||| ||||||
Sbjct: 4908 tcaaaattatat 4919



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 154/190 (81%)
 Strand = Plus / Plus

                                                                       
Query: 137 tgcagcaaatcctgttcgaagtggcagctaatatctgattcaggaatgcatgtttcggcc 196
           |||||||||||| |||| |||||| ||||| ||||  |||||||||||||||||||  | 
Sbjct: 16  tgcagcaaatccagttcaaagtggaagctactatcaaattcaggaatgcatgtttcaact 75

                                                                       
Query: 197 gaactcaccaagaatgggactagagtgtgcttggatgcgggccctgacggtgtcatcaca 256
           ||||||||||| || || || ||||| |||||||| ||  | ||||| ||    ||||| 
Sbjct: 76  gaactcaccaataacggaaccagagtatgcttggaggccagtcctgatggaaatatcacg 135

                                                                       
Query: 257 acggatcaatgcaagtgcctgaccgaagatccaacctgcgaccctgagagccagtggttc 316
           ||  |||| ||||||||||| |||| |||||| |  ||| | |||||||| |||||||||
Sbjct: 136 acaaatcagtgcaagtgcctaaccgtagatccgaattgcaatcctgagagtcagtggttc 195

                     
Query: 317 aaagttatat 326
           ||| ||||||
Sbjct: 196 aaaattatat 205



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 292  ctgcgaccctgagagccagtggttcaa 318
            ||||||||| |||||||||||||||||
Sbjct: 9090 ctgcgacccggagagccagtggttcaa 9116



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>ref|XM_472909.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1665

 Score =  121 bits (61), Expect = 3e-24
 Identities = 205/253 (81%)
 Strand = Plus / Plus

                                                                        
Query: 74   aaacaaactgggcaatgccttgaggccaagtctgtgggtgatactgcaaagctcgggact 133
            ||||||||||| ||||||||  |||| |||||||| ||||| | ||||||||| || || 
Sbjct: 1330 aaacaaactggacaatgcctccaggcgaagtctgttggtgagaatgcaaagcttggcacc 1389

                                                                        
Query: 134  ggctgcagcaaatcctgttcgaagtggcagctaatatctgattcaggaatgcatgtttcg 193
             | |||||||||||| |||| |||||| ||||| ||||  ||||||||||||||||||| 
Sbjct: 1390 agttgcagcaaatccagttcaaagtggaagctactatcaaattcaggaatgcatgtttca 1449

                                                                        
Query: 194  gccgaactcaccaagaatgggactagagtgtgcttggatgcgggccctgacggtgtcatc 253
             | ||||||||||| || || || ||||| |||||||| ||  | ||||| ||    |||
Sbjct: 1450 actgaactcaccaataacggaaccagagtatgcttggaggccagtcctgatggaaatatc 1509

                                                                        
Query: 254  acaacggatcaatgcaagtgcctgaccgaagatccaacctgcgaccctgagagccagtgg 313
            || ||  |||| ||||||||||| |||| |||||| |  ||| | |||||||| ||||||
Sbjct: 1510 acgacaaatcagtgcaagtgcctaaccgtagatccgaattgcaatcctgagagtcagtgg 1569

                         
Query: 314  ttcaaagttatat 326
            |||||| ||||||
Sbjct: 1570 ttcaaaattatat 1582



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>dbj|AK109889.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-149-E03, full
            insert sequence
          Length = 1992

 Score =  121 bits (61), Expect = 3e-24
 Identities = 205/253 (81%)
 Strand = Plus / Plus

                                                                        
Query: 74   aaacaaactgggcaatgccttgaggccaagtctgtgggtgatactgcaaagctcgggact 133
            ||||||||||| ||||||||  |||| |||||||| ||||| | ||||||||| || || 
Sbjct: 1340 aaacaaactggacaatgcctccaggcgaagtctgttggtgagaatgcaaagcttggcacc 1399

                                                                        
Query: 134  ggctgcagcaaatcctgttcgaagtggcagctaatatctgattcaggaatgcatgtttcg 193
             | |||||||||||| |||| |||||| ||||| ||||  ||||||||||||||||||| 
Sbjct: 1400 agttgcagcaaatccagttcaaagtggaagctactatcaaattcaggaatgcatgtttca 1459

                                                                        
Query: 194  gccgaactcaccaagaatgggactagagtgtgcttggatgcgggccctgacggtgtcatc 253
             | ||||||||||| || || || ||||| |||||||| ||  | ||||| ||    |||
Sbjct: 1460 actgaactcaccaataacggaaccagagtatgcttggaggccagtcctgatggaaatatc 1519

                                                                        
Query: 254  acaacggatcaatgcaagtgcctgaccgaagatccaacctgcgaccctgagagccagtgg 313
            || ||  |||| ||||||||||| |||| |||||| |  ||| | |||||||| ||||||
Sbjct: 1520 acgacaaatcagtgcaagtgcctaaccgtagatccgaattgcaatcctgagagtcagtgg 1579

                         
Query: 314  ttcaaagttatat 326
            |||||| ||||||
Sbjct: 1580 ttcaaaattatat 1592



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>ref|XM_472911.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1668

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 292  ctgcgaccctgagagccagtggttcaa 318
            ||||||||| |||||||||||||||||
Sbjct: 1548 ctgcgacccggagagccagtggttcaa 1574



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>dbj|AK119297.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-130-E08, full
           insert sequence
          Length = 2877

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 292 ctgcgaccctgagagccagtggttcaa 318
           ||||||||| |||||||||||||||||
Sbjct: 384 ctgcgacccggagagccagtggttcaa 358



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>ref|NM_001016221.2| Xenopus tropicalis hypothetical protein LOC548975 (LOC548975), mRNA
          Length = 2625

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 132  ctggctgcagcaaatcctgtt 152
            |||||||||||||||||||||
Sbjct: 1520 ctggctgcagcaaatcctgtt 1540



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>gb|AC158384.2| Mus musculus BAC clone RP24-97I24 from chromosome 9, complete sequence
          Length = 163817

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 558   ttctttttctgtcaaaacaaa 578
             |||||||||||||||||||||
Sbjct: 15761 ttctttttctgtcaaaacaaa 15741



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>gb|AC156640.2| Mus musculus BAC clone RP23-313M2 from chromosome 9, complete sequence
          Length = 175708

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 558   ttctttttctgtcaaaacaaa 578
             |||||||||||||||||||||
Sbjct: 38567 ttctttttctgtcaaaacaaa 38587



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>emb|CR926305.2| Xenopus tropicalis finished cDNA, clone TEgg078c13
          Length = 2625

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 132  ctggctgcagcaaatcctgtt 152
            |||||||||||||||||||||
Sbjct: 1520 ctggctgcagcaaatcctgtt 1540



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>gb|AC004829.2| Homo sapiens PAC clone RP4-530J23 from 7, complete sequence
          Length = 129837

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 559   tctttttctgtcaaaacaaatcac 582
             ||||||||||||||| ||||||||
Sbjct: 61996 tctttttctgtcaaagcaaatcac 62019



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>gb|AC146161.2| Pan troglodytes BAC clone RP43-1G6 from 7, complete sequence
          Length = 205885

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 559   tctttttctgtcaaaacaaatcac 582
             ||||||||||||||| ||||||||
Sbjct: 39742 tctttttctgtcaaagcaaatcac 39719



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>gb|AC145091.1| Pan troglodytes BAC clone RP43-12F8 from 7, complete sequence
          Length = 175672

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 559    tctttttctgtcaaaacaaatcac 582
              ||||||||||||||| ||||||||
Sbjct: 163907 tctttttctgtcaaagcaaatcac 163884



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>emb|AL731573.8| Human DNA sequence from clone RP11-215C13 on chromosome 10, complete
             sequence
          Length = 131465

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 550   taagcactttctttttctgt 569
             ||||||||||||||||||||
Sbjct: 95267 taagcactttctttttctgt 95286



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>emb|AL021879.3|HS209B9 Human DNA sequence from clone RP1-209B9 on chromosome 20p12 Contains
             the HAO1 gene for hydroxyacid oxidase (glycolate oxidase)
             1, ESTs, STSs and GSSs, complete sequence
          Length = 98569

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 552   agcactttctttttctgtca 571
             ||||||||||||||||||||
Sbjct: 45094 agcactttctttttctgtca 45075



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>emb|AL589651.8| Mouse DNA sequence from clone RP23-138F20 on chromosome 13 Contains
             five genes for olfactory receptors, a novel gene, the H1f5
             gene for H1 histone family member 5, three genes and one
             pseudogene for H2a histone family members, four genes for
             H2b, two genes for H4, and two genes for H3 histone family
             members and seven CpG islands, complete sequence
          Length = 222823

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 597   gttgttcagttcagaataaa 616
             ||||||||||||||||||||
Sbjct: 98522 gttgttcagttcagaataaa 98541



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>emb|BX511073.3| Zebrafish DNA sequence from clone DKEY-245I10 in linkage group 8,
              complete sequence
          Length = 218866

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 555    actttctttttctgtcaaaa 574
              ||||||||||||||||||||
Sbjct: 214283 actttctttttctgtcaaaa 214302



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>gb|AC026362.38| Homo sapiens 12 BAC RP11-197N18 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 163077

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 339    gcatgccaggtgaggcctct 358
              ||||||||||||||||||||
Sbjct: 150021 gcatgccaggtgaggcctct 150040



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>gb|AF275265.3|AF275265 Mus musculus receptor protein tyrosine phosphatase-rho (Ptprt) gene,
            exons 10 and 11 and partial cds
          Length = 5957

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 335  agaggcatgccaggtgaggcctct 358
            |||||||||| |||||||||||||
Sbjct: 3400 agaggcatgcaaggtgaggcctct 3377



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>gb|AC132956.4| Mus musculus BAC clone RP23-106K20 from chromosome 7, complete sequence
          Length = 195204

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 556   ctttctttttctgtcaaaac 575
             ||||||||||||||||||||
Sbjct: 52437 ctttctttttctgtcaaaac 52418



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>gb|AC175034.1| Mus musculus BAC clone RP23-204E23 from chromosome 7, complete sequence
          Length = 208487

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 556   ctttctttttctgtcaaaac 575
             ||||||||||||||||||||
Sbjct: 58232 ctttctttttctgtcaaaac 58251



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>emb|AL935283.16| Zebrafish DNA sequence from clone CH211-247O1 in linkage group 7,
             complete sequence
          Length = 197927

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 555   actttctttttctgtcaaaa 574
             ||||||||||||||||||||
Sbjct: 37335 actttctttttctgtcaaaa 37316



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>gb|BC089118.1| Xenopus laevis mis5p, mRNA (cDNA clone MGC:85070 IMAGE:6866732),
            complete cds
          Length = 2642

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 132  ctggctgcagcaaatcctgt 151
            ||||||||||||||||||||
Sbjct: 1548 ctggctgcagcaaatcctgt 1567



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>gb|U44050.1|XLU44050 Xenopus laevis mis5 mRNA, complete cds
          Length = 2616

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 132  ctggctgcagcaaatcctgt 151
            ||||||||||||||||||||
Sbjct: 1543 ctggctgcagcaaatcctgt 1562



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>emb|AL591586.8| Mouse DNA sequence from clone RP23-126L18 on chromosome 2, complete
              sequence
          Length = 187043

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 335    agaggcatgccaggtgaggcctct 358
              |||||||||| |||||||||||||
Sbjct: 154938 agaggcatgcaaggtgaggcctct 154961


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,094,970
Number of Sequences: 3902068
Number of extensions: 5094970
Number of successful extensions: 90390
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 90313
Number of HSP's gapped (non-prelim): 69
length of query: 642
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 619
effective length of database: 17,143,297,704
effective search space: 10611701278776
effective search space used: 10611701278776
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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