| Clone Name | baal13p06 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_472910.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1653 Score = 190 bits (96), Expect = 4e-45 Identities = 258/312 (82%) Strand = Plus / Plus Query: 15 tgggtccgtgcgatgaatcgaacgcttggaactacacctccacgtatgagcttgtgctga 74 ||||||| || |||||||| ||||||||||||||||| || || | ||| | || ||| Sbjct: 1265 tgggtccatgtgatgaatcaaacgcttggaactacacatcaacacacgagttggtactgc 1324 Query: 75 aacaaactgggcaatgccttgaggccaagtctgtgggtgatactgcaaagctcgggactg 134 |||| ||||| |||||||| ||| ||||||||| ||||| | |||| |||| ||||| | Sbjct: 1325 aacacactggtcaatgcctccaggtcaagtctgtcggtgagaatgcacagcttgggaccg 1384 Query: 135 gctgcagcaaatcctgttcgaagtggcagctaatatctgattcaggaatgcatgtttcgg 194 |||||||||||| |||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 1385 attgcagcaaatccagttcaaagtggcagctaatatcaaattcaggaatgcatgtttcga 1444 Query: 195 ccgaactcaccaagaatgggactagagtgtgcttggatgcgggccctgacggtgtcatca 254 | |||||||| || ||||| || ||||| ||| ||||||| ||||| ||| |||||| Sbjct: 1445 ctgaactcactaaaaatggaaccagagtatgcctggatgccactcctgatggtatcatca 1504 Query: 255 caacggatcaatgcaagtgcctgaccgaagatccaacctgcgaccctgagagccagtggt 314 |||| ||| ||||||||||| |||| |||||||| ||| | |||||||||||||||| Sbjct: 1505 caacaaatccgtgcaagtgcctaaccggagatccaaattgcaatcctgagagccagtggt 1564 Query: 315 tcaaagttatat 326 ||||| |||||| Sbjct: 1565 tcaaaattatat 1576
>emb|AL606614.3|OSJN00047 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0011N17, complete sequence Length = 129498 Score = 190 bits (96), Expect = 4e-45 Identities = 258/312 (82%) Strand = Plus / Plus Query: 15 tgggtccgtgcgatgaatcgaacgcttggaactacacctccacgtatgagcttgtgctga 74 ||||||| || |||||||| ||||||||||||||||| || || | ||| | || ||| Sbjct: 35337 tgggtccatgtgatgaatcaaacgcttggaactacacatcaacacacgagttggtactgc 35396 Query: 75 aacaaactgggcaatgccttgaggccaagtctgtgggtgatactgcaaagctcgggactg 134 |||| ||||| |||||||| ||| ||||||||| ||||| | |||| |||| ||||| | Sbjct: 35397 aacacactggtcaatgcctccaggtcaagtctgtcggtgagaatgcacagcttgggaccg 35456 Query: 135 gctgcagcaaatcctgttcgaagtggcagctaatatctgattcaggaatgcatgtttcgg 194 |||||||||||| |||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 35457 attgcagcaaatccagttcaaagtggcagctaatatcaaattcaggaatgcatgtttcga 35516 Query: 195 ccgaactcaccaagaatgggactagagtgtgcttggatgcgggccctgacggtgtcatca 254 | |||||||| || ||||| || ||||| ||| ||||||| ||||| ||| |||||| Sbjct: 35517 ctgaactcactaaaaatggaaccagagtatgcctggatgccactcctgatggtatcatca 35576 Query: 255 caacggatcaatgcaagtgcctgaccgaagatccaacctgcgaccctgagagccagtggt 314 |||| ||| ||||||||||| |||| |||||||| ||| | |||||||||||||||| Sbjct: 35577 caacaaatccgtgcaagtgcctaaccggagatccaaattgcaatcctgagagccagtggt 35636 Query: 315 tcaaagttatat 326 ||||| |||||| Sbjct: 35637 tcaaaattatat 35648 Score = 121 bits (61), Expect = 3e-24 Identities = 205/253 (81%) Strand = Plus / Plus Query: 74 aaacaaactgggcaatgccttgaggccaagtctgtgggtgatactgcaaagctcgggact 133 ||||||||||| |||||||| |||| |||||||| ||||| | ||||||||| || || Sbjct: 30521 aaacaaactggacaatgcctccaggcgaagtctgttggtgagaatgcaaagcttggcacc 30580 Query: 134 ggctgcagcaaatcctgttcgaagtggcagctaatatctgattcaggaatgcatgtttcg 193 | |||||||||||| |||| |||||| ||||| |||| ||||||||||||||||||| Sbjct: 30581 agttgcagcaaatccagttcaaagtggaagctactatcaaattcaggaatgcatgtttca 30640 Query: 194 gccgaactcaccaagaatgggactagagtgtgcttggatgcgggccctgacggtgtcatc 253 | ||||||||||| || || || ||||| |||||||| || | ||||| || ||| Sbjct: 30641 actgaactcaccaataacggaaccagagtatgcttggaggccagtcctgatggaaatatc 30700 Query: 254 acaacggatcaatgcaagtgcctgaccgaagatccaacctgcgaccctgagagccagtgg 313 || || |||| ||||||||||| |||| |||||| | ||| | |||||||| |||||| Sbjct: 30701 acgacaaatcagtgcaagtgcctaaccgtagatccgaattgcaatcctgagagtcagtgg 30760 Query: 314 ttcaaagttatat 326 |||||| |||||| Sbjct: 30761 ttcaaaattatat 30773 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 292 ctgcgaccctgagagccagtggttcaa 318 ||||||||| ||||||||||||||||| Sbjct: 39827 ctgcgacccggagagccagtggttcaa 39853
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 190 bits (96), Expect = 4e-45 Identities = 258/312 (82%) Strand = Plus / Plus Query: 15 tgggtccgtgcgatgaatcgaacgcttggaactacacctccacgtatgagcttgtgctga 74 ||||||| || |||||||| ||||||||||||||||| || || | ||| | || ||| Sbjct: 24038358 tgggtccatgtgatgaatcaaacgcttggaactacacatcaacacacgagttggtactgc 24038417 Query: 75 aacaaactgggcaatgccttgaggccaagtctgtgggtgatactgcaaagctcgggactg 134 |||| ||||| |||||||| ||| ||||||||| ||||| | |||| |||| ||||| | Sbjct: 24038418 aacacactggtcaatgcctccaggtcaagtctgtcggtgagaatgcacagcttgggaccg 24038477 Query: 135 gctgcagcaaatcctgttcgaagtggcagctaatatctgattcaggaatgcatgtttcgg 194 |||||||||||| |||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 24038478 attgcagcaaatccagttcaaagtggcagctaatatcaaattcaggaatgcatgtttcga 24038537 Query: 195 ccgaactcaccaagaatgggactagagtgtgcttggatgcgggccctgacggtgtcatca 254 | |||||||| || ||||| || ||||| ||| ||||||| ||||| ||| |||||| Sbjct: 24038538 ctgaactcactaaaaatggaaccagagtatgcctggatgccactcctgatggtatcatca 24038597 Query: 255 caacggatcaatgcaagtgcctgaccgaagatccaacctgcgaccctgagagccagtggt 314 |||| ||| ||||||||||| |||| |||||||| ||| | |||||||||||||||| Sbjct: 24038598 caacaaatccgtgcaagtgcctaaccggagatccaaattgcaatcctgagagccagtggt 24038657 Query: 315 tcaaagttatat 326 ||||| |||||| Sbjct: 24038658 tcaaaattatat 24038669 Score = 121 bits (61), Expect = 3e-24 Identities = 205/253 (81%) Strand = Plus / Plus Query: 74 aaacaaactgggcaatgccttgaggccaagtctgtgggtgatactgcaaagctcgggact 133 ||||||||||| |||||||| |||| |||||||| ||||| | ||||||||| || || Sbjct: 24033542 aaacaaactggacaatgcctccaggcgaagtctgttggtgagaatgcaaagcttggcacc 24033601 Query: 134 ggctgcagcaaatcctgttcgaagtggcagctaatatctgattcaggaatgcatgtttcg 193 | |||||||||||| |||| |||||| ||||| |||| ||||||||||||||||||| Sbjct: 24033602 agttgcagcaaatccagttcaaagtggaagctactatcaaattcaggaatgcatgtttca 24033661 Query: 194 gccgaactcaccaagaatgggactagagtgtgcttggatgcgggccctgacggtgtcatc 253 | ||||||||||| || || || ||||| |||||||| || | ||||| || ||| Sbjct: 24033662 actgaactcaccaataacggaaccagagtatgcttggaggccagtcctgatggaaatatc 24033721 Query: 254 acaacggatcaatgcaagtgcctgaccgaagatccaacctgcgaccctgagagccagtgg 313 || || |||| ||||||||||| |||| |||||| | ||| | |||||||| |||||| Sbjct: 24033722 acgacaaatcagtgcaagtgcctaaccgtagatccgaattgcaatcctgagagtcagtgg 24033781 Query: 314 ttcaaagttatat 326 |||||| |||||| Sbjct: 24033782 ttcaaaattatat 24033794 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 292 ctgcgaccctgagagccagtggttcaa 318 ||||||||| ||||||||||||||||| Sbjct: 24042848 ctgcgacccggagagccagtggttcaa 24042874
>emb|AL442104.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0510A06, complete sequence Length = 90767 Score = 190 bits (96), Expect = 4e-45 Identities = 258/312 (82%) Strand = Plus / Plus Query: 15 tgggtccgtgcgatgaatcgaacgcttggaactacacctccacgtatgagcttgtgctga 74 ||||||| || |||||||| ||||||||||||||||| || || | ||| | || ||| Sbjct: 4608 tgggtccatgtgatgaatcaaacgcttggaactacacatcaacacacgagttggtactgc 4667 Query: 75 aacaaactgggcaatgccttgaggccaagtctgtgggtgatactgcaaagctcgggactg 134 |||| ||||| |||||||| ||| ||||||||| ||||| | |||| |||| ||||| | Sbjct: 4668 aacacactggtcaatgcctccaggtcaagtctgtcggtgagaatgcacagcttgggaccg 4727 Query: 135 gctgcagcaaatcctgttcgaagtggcagctaatatctgattcaggaatgcatgtttcgg 194 |||||||||||| |||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 4728 attgcagcaaatccagttcaaagtggcagctaatatcaaattcaggaatgcatgtttcga 4787 Query: 195 ccgaactcaccaagaatgggactagagtgtgcttggatgcgggccctgacggtgtcatca 254 | |||||||| || ||||| || ||||| ||| ||||||| ||||| ||| |||||| Sbjct: 4788 ctgaactcactaaaaatggaaccagagtatgcctggatgccactcctgatggtatcatca 4847 Query: 255 caacggatcaatgcaagtgcctgaccgaagatccaacctgcgaccctgagagccagtggt 314 |||| ||| ||||||||||| |||| |||||||| ||| | |||||||||||||||| Sbjct: 4848 caacaaatccgtgcaagtgcctaaccggagatccaaattgcaatcctgagagccagtggt 4907 Query: 315 tcaaagttatat 326 ||||| |||||| Sbjct: 4908 tcaaaattatat 4919 Score = 91.7 bits (46), Expect = 3e-15 Identities = 154/190 (81%) Strand = Plus / Plus Query: 137 tgcagcaaatcctgttcgaagtggcagctaatatctgattcaggaatgcatgtttcggcc 196 |||||||||||| |||| |||||| ||||| |||| ||||||||||||||||||| | Sbjct: 16 tgcagcaaatccagttcaaagtggaagctactatcaaattcaggaatgcatgtttcaact 75 Query: 197 gaactcaccaagaatgggactagagtgtgcttggatgcgggccctgacggtgtcatcaca 256 ||||||||||| || || || ||||| |||||||| || | ||||| || ||||| Sbjct: 76 gaactcaccaataacggaaccagagtatgcttggaggccagtcctgatggaaatatcacg 135 Query: 257 acggatcaatgcaagtgcctgaccgaagatccaacctgcgaccctgagagccagtggttc 316 || |||| ||||||||||| |||| |||||| | ||| | |||||||| ||||||||| Sbjct: 136 acaaatcagtgcaagtgcctaaccgtagatccgaattgcaatcctgagagtcagtggttc 195 Query: 317 aaagttatat 326 ||| |||||| Sbjct: 196 aaaattatat 205 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 292 ctgcgaccctgagagccagtggttcaa 318 ||||||||| ||||||||||||||||| Sbjct: 9090 ctgcgacccggagagccagtggttcaa 9116
>ref|XM_472909.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1665 Score = 121 bits (61), Expect = 3e-24 Identities = 205/253 (81%) Strand = Plus / Plus Query: 74 aaacaaactgggcaatgccttgaggccaagtctgtgggtgatactgcaaagctcgggact 133 ||||||||||| |||||||| |||| |||||||| ||||| | ||||||||| || || Sbjct: 1330 aaacaaactggacaatgcctccaggcgaagtctgttggtgagaatgcaaagcttggcacc 1389 Query: 134 ggctgcagcaaatcctgttcgaagtggcagctaatatctgattcaggaatgcatgtttcg 193 | |||||||||||| |||| |||||| ||||| |||| ||||||||||||||||||| Sbjct: 1390 agttgcagcaaatccagttcaaagtggaagctactatcaaattcaggaatgcatgtttca 1449 Query: 194 gccgaactcaccaagaatgggactagagtgtgcttggatgcgggccctgacggtgtcatc 253 | ||||||||||| || || || ||||| |||||||| || | ||||| || ||| Sbjct: 1450 actgaactcaccaataacggaaccagagtatgcttggaggccagtcctgatggaaatatc 1509 Query: 254 acaacggatcaatgcaagtgcctgaccgaagatccaacctgcgaccctgagagccagtgg 313 || || |||| ||||||||||| |||| |||||| | ||| | |||||||| |||||| Sbjct: 1510 acgacaaatcagtgcaagtgcctaaccgtagatccgaattgcaatcctgagagtcagtgg 1569 Query: 314 ttcaaagttatat 326 |||||| |||||| Sbjct: 1570 ttcaaaattatat 1582
>dbj|AK109889.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-149-E03, full insert sequence Length = 1992 Score = 121 bits (61), Expect = 3e-24 Identities = 205/253 (81%) Strand = Plus / Plus Query: 74 aaacaaactgggcaatgccttgaggccaagtctgtgggtgatactgcaaagctcgggact 133 ||||||||||| |||||||| |||| |||||||| ||||| | ||||||||| || || Sbjct: 1340 aaacaaactggacaatgcctccaggcgaagtctgttggtgagaatgcaaagcttggcacc 1399 Query: 134 ggctgcagcaaatcctgttcgaagtggcagctaatatctgattcaggaatgcatgtttcg 193 | |||||||||||| |||| |||||| ||||| |||| ||||||||||||||||||| Sbjct: 1400 agttgcagcaaatccagttcaaagtggaagctactatcaaattcaggaatgcatgtttca 1459 Query: 194 gccgaactcaccaagaatgggactagagtgtgcttggatgcgggccctgacggtgtcatc 253 | ||||||||||| || || || ||||| |||||||| || | ||||| || ||| Sbjct: 1460 actgaactcaccaataacggaaccagagtatgcttggaggccagtcctgatggaaatatc 1519 Query: 254 acaacggatcaatgcaagtgcctgaccgaagatccaacctgcgaccctgagagccagtgg 313 || || |||| ||||||||||| |||| |||||| | ||| | |||||||| |||||| Sbjct: 1520 acgacaaatcagtgcaagtgcctaaccgtagatccgaattgcaatcctgagagtcagtgg 1579 Query: 314 ttcaaagttatat 326 |||||| |||||| Sbjct: 1580 ttcaaaattatat 1592
>ref|XM_472911.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1668 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 292 ctgcgaccctgagagccagtggttcaa 318 ||||||||| ||||||||||||||||| Sbjct: 1548 ctgcgacccggagagccagtggttcaa 1574
>dbj|AK119297.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-130-E08, full insert sequence Length = 2877 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 292 ctgcgaccctgagagccagtggttcaa 318 ||||||||| ||||||||||||||||| Sbjct: 384 ctgcgacccggagagccagtggttcaa 358
>ref|NM_001016221.2| Xenopus tropicalis hypothetical protein LOC548975 (LOC548975), mRNA Length = 2625 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 132 ctggctgcagcaaatcctgtt 152 ||||||||||||||||||||| Sbjct: 1520 ctggctgcagcaaatcctgtt 1540
>gb|AC158384.2| Mus musculus BAC clone RP24-97I24 from chromosome 9, complete sequence Length = 163817 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 558 ttctttttctgtcaaaacaaa 578 ||||||||||||||||||||| Sbjct: 15761 ttctttttctgtcaaaacaaa 15741
>gb|AC156640.2| Mus musculus BAC clone RP23-313M2 from chromosome 9, complete sequence Length = 175708 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 558 ttctttttctgtcaaaacaaa 578 ||||||||||||||||||||| Sbjct: 38567 ttctttttctgtcaaaacaaa 38587
>emb|CR926305.2| Xenopus tropicalis finished cDNA, clone TEgg078c13 Length = 2625 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 132 ctggctgcagcaaatcctgtt 152 ||||||||||||||||||||| Sbjct: 1520 ctggctgcagcaaatcctgtt 1540
>gb|AC004829.2| Homo sapiens PAC clone RP4-530J23 from 7, complete sequence Length = 129837 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 559 tctttttctgtcaaaacaaatcac 582 ||||||||||||||| |||||||| Sbjct: 61996 tctttttctgtcaaagcaaatcac 62019
>gb|AC146161.2| Pan troglodytes BAC clone RP43-1G6 from 7, complete sequence Length = 205885 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 559 tctttttctgtcaaaacaaatcac 582 ||||||||||||||| |||||||| Sbjct: 39742 tctttttctgtcaaagcaaatcac 39719
>gb|AC145091.1| Pan troglodytes BAC clone RP43-12F8 from 7, complete sequence Length = 175672 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 559 tctttttctgtcaaaacaaatcac 582 ||||||||||||||| |||||||| Sbjct: 163907 tctttttctgtcaaagcaaatcac 163884
>emb|AL731573.8| Human DNA sequence from clone RP11-215C13 on chromosome 10, complete sequence Length = 131465 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 550 taagcactttctttttctgt 569 |||||||||||||||||||| Sbjct: 95267 taagcactttctttttctgt 95286
>emb|AL021879.3|HS209B9 Human DNA sequence from clone RP1-209B9 on chromosome 20p12 Contains the HAO1 gene for hydroxyacid oxidase (glycolate oxidase) 1, ESTs, STSs and GSSs, complete sequence Length = 98569 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 552 agcactttctttttctgtca 571 |||||||||||||||||||| Sbjct: 45094 agcactttctttttctgtca 45075
>emb|AL589651.8| Mouse DNA sequence from clone RP23-138F20 on chromosome 13 Contains five genes for olfactory receptors, a novel gene, the H1f5 gene for H1 histone family member 5, three genes and one pseudogene for H2a histone family members, four genes for H2b, two genes for H4, and two genes for H3 histone family members and seven CpG islands, complete sequence Length = 222823 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 597 gttgttcagttcagaataaa 616 |||||||||||||||||||| Sbjct: 98522 gttgttcagttcagaataaa 98541
>emb|BX511073.3| Zebrafish DNA sequence from clone DKEY-245I10 in linkage group 8, complete sequence Length = 218866 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 555 actttctttttctgtcaaaa 574 |||||||||||||||||||| Sbjct: 214283 actttctttttctgtcaaaa 214302
>gb|AC026362.38| Homo sapiens 12 BAC RP11-197N18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 163077 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 gcatgccaggtgaggcctct 358 |||||||||||||||||||| Sbjct: 150021 gcatgccaggtgaggcctct 150040
>gb|AF275265.3|AF275265 Mus musculus receptor protein tyrosine phosphatase-rho (Ptprt) gene, exons 10 and 11 and partial cds Length = 5957 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 335 agaggcatgccaggtgaggcctct 358 |||||||||| ||||||||||||| Sbjct: 3400 agaggcatgcaaggtgaggcctct 3377
>gb|AC132956.4| Mus musculus BAC clone RP23-106K20 from chromosome 7, complete sequence Length = 195204 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 556 ctttctttttctgtcaaaac 575 |||||||||||||||||||| Sbjct: 52437 ctttctttttctgtcaaaac 52418
>gb|AC175034.1| Mus musculus BAC clone RP23-204E23 from chromosome 7, complete sequence Length = 208487 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 556 ctttctttttctgtcaaaac 575 |||||||||||||||||||| Sbjct: 58232 ctttctttttctgtcaaaac 58251
>emb|AL935283.16| Zebrafish DNA sequence from clone CH211-247O1 in linkage group 7, complete sequence Length = 197927 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 555 actttctttttctgtcaaaa 574 |||||||||||||||||||| Sbjct: 37335 actttctttttctgtcaaaa 37316
>gb|BC089118.1| Xenopus laevis mis5p, mRNA (cDNA clone MGC:85070 IMAGE:6866732), complete cds Length = 2642 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 ctggctgcagcaaatcctgt 151 |||||||||||||||||||| Sbjct: 1548 ctggctgcagcaaatcctgt 1567
>gb|U44050.1|XLU44050 Xenopus laevis mis5 mRNA, complete cds Length = 2616 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 ctggctgcagcaaatcctgt 151 |||||||||||||||||||| Sbjct: 1543 ctggctgcagcaaatcctgt 1562
>emb|AL591586.8| Mouse DNA sequence from clone RP23-126L18 on chromosome 2, complete sequence Length = 187043 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 335 agaggcatgccaggtgaggcctct 358 |||||||||| ||||||||||||| Sbjct: 154938 agaggcatgcaaggtgaggcctct 154961 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,094,970 Number of Sequences: 3902068 Number of extensions: 5094970 Number of successful extensions: 90390 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 27 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 90313 Number of HSP's gapped (non-prelim): 69 length of query: 642 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 619 effective length of database: 17,143,297,704 effective search space: 10611701278776 effective search space used: 10611701278776 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)